Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
09:13:43 (254615): wrapper (7.7.26015): starting
09:13:43 (254615): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 09:13:43] Arguments: --nthreads 12
[2024-05-18 09:13:43] Threads: 12
[2024-05-18 09:13:43] Checking for CVMFS
[2024-05-18 09:13:43] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 09:13:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 09:13:43] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 09:13:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 09:13:43] 2.10.1.0 250101 185143 202656 132884 1 104 32602855 45568000 11606 130560 0 1136497221 99.780 662982186 18857 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-05-18 09:13:43] CVMFS is ok
[2024-05-18 09:13:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 09:13:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 09:13:43] Further information can be found at the LHC@home message board.
[2024-05-18 09:13:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 09:13:43] Checking for apptainer binary...
[2024-05-18 09:13:43] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 09:13:43] Running /usr/bin/apptainer --version
[2024-05-18 09:13:44] apptainer version 1.1.8-1.el7
[2024-05-18 09:13:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 09:13:44] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0168.triumf.lcg
[2024-05-18 09:13:44] apptainer works
[2024-05-18 09:13:44] Set ATHENA_PROC_NUMBER=12
[2024-05-18 09:13:44] Set ATHENA_CORE_NUMBER=12
[2024-05-18 09:13:44] Starting ATLAS job with PandaID=6208653833
[2024-05-18 09:13:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 10:25:59]  *** The last 200 lines of the pilot log: ***
[2024-05-18 10:25:59]  ddmendpoint=NDGF-T1_DATADISK
[2024-05-18 10:25:59]  direct_access_lan=False
[2024-05-18 10:25:59]  direct_access_wan=False
[2024-05-18 10:25:59]  domain=
[2024-05-18 10:25:59]  filesize=353260
[2024-05-18 10:25:59]  filetype=log
[2024-05-18 10:25:59]  guid=89536586-4a71-4c02-9ab7-b5e5fb394e0e
[2024-05-18 10:25:59]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-18 10:25:59]  is_tar=False
[2024-05-18 10:25:59]  lfn=log.38776125._016260.job.log.tgz.1
[2024-05-18 10:25:59]  mtime=0
[2024-05-18 10:25:59]  protocol_id=None
[2024-05-18 10:25:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-18 10:25:59]  replicas=None
[2024-05-18 10:25:59]  scope=mc23_13p6TeV
[2024-05-18 10:25:59]  status=None
[2024-05-18 10:25:59]  status_code=0
[2024-05-18 10:25:59]  storage_token=
[2024-05-18 10:25:59]  surl=/home/boinc/slots/0/PanDA_Pilot-6208653833/log.38776125._016260.job.log.tgz.1
[2024-05-18 10:25:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/cb/log.38776125._016260.job.log.tgz.1
[2024-05-18 10:25:59]  workdir=None
[2024-05-18 10:25:59] ]
[2024-05-18 10:25:59] 2024-05-18 17:25:38,122 | INFO     | transferring file log.38776125._016260.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6208653833/log.38776125._016260.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-18 10:25:59] 2024-05-18 17:25:38,123 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6208653833/log.38776125._016260.job.log.tgz.1 /home/boinc/slots/0/log.38776125._016260.job.log.t
[2024-05-18 10:25:59] 2024-05-18 17:25:38,150 | INFO     | adding to output.list: log.38776125._016260.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/cb/log.38776125._016260.job.log.tg
[2024-05-18 10:25:59] 2024-05-18 17:25:38,151 | INFO     | summary of transferred files:
[2024-05-18 10:25:59] 2024-05-18 17:25:38,151 | INFO     |  -- lfn=log.38776125._016260.job.log.tgz.1, status_code=0, status=transferred
[2024-05-18 10:25:59] 2024-05-18 17:25:38,151 | INFO     | stage-out finished correctly
[2024-05-18 10:25:59] 2024-05-18 17:25:38,938 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-18 10:25:59] 2024-05-18 17:25:40,614 | INFO     | job 6208653833 has state=finished
[2024-05-18 10:25:59] 2024-05-18 17:25:40,615 | INFO     | preparing for final server update for job 6208653833 in state='finished'
[2024-05-18 10:25:59] 2024-05-18 17:25:40,615 | INFO     | this job has now completed (state=finished)
[2024-05-18 10:25:59] 2024-05-18 17:25:40,616 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-18 10:25:59] 2024-05-18 17:25:40,616 | INFO     | job 6208653833 has finished - writing final server update
[2024-05-18 10:25:59] 2024-05-18 17:25:40,616 | INFO     | total number of processed events: 400 (read)
[2024-05-18 10:25:59] 2024-05-18 17:25:40,622 | INFO     | executing command: lscpu
[2024-05-18 10:25:59] 2024-05-18 17:25:40,683 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-18 10:25:59] 2024-05-18 17:25:40,683 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 10:25:59] 2024-05-18 17:25:40,746 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 10:25:59] 2024-05-18 17:25:45,011 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-18 10:25:59] 2024-05-18 17:25:45,012 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6208653833/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 10:25:59] 2024-05-18 17:25:45,012 | INFO     | extracted standard info from prmon json
[2024-05-18 10:25:59] 2024-05-18 17:25:45,013 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 10:25:59] 2024-05-18 17:25:45,013 | WARNING  | GPU info not found in prmon json
[2024-05-18 10:25:59] 2024-05-18 17:25:45,013 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 10:25:59] 2024-05-18 17:25:45,013 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 10:25:59] 2024-05-18 17:25:45,019 | INFO     | fitting pss+swap vs Time
[2024-05-18 10:25:59] 2024-05-18 17:25:45,019 | INFO     | model: linear, x: [1716049167.0, 1716049228.0, 1716049289.0, 1716049350.0, 1716049411.0, 1716049472.0, 1716049533.0, 1716049594.0, 1716049655.0, 1716049716.0, 1716
[2024-05-18 10:25:59] 2024-05-18 17:25:45,020 | INFO     | sum of square deviations: 81266640.0
[2024-05-18 10:25:59] 2024-05-18 17:25:45,020 | INFO     | sum of deviations: 25860085233.5
[2024-05-18 10:25:59] 2024-05-18 17:25:45,020 | INFO     | mean x: 1716051088.5
[2024-05-18 10:25:59] 2024-05-18 17:25:45,020 | INFO     | mean y: 2568708.171875
[2024-05-18 10:25:59] 2024-05-18 17:25:45,020 | INFO     | -- intersect: -546066856749.1923
[2024-05-18 10:25:59] 2024-05-18 17:25:45,020 | INFO     | intersect: -546066856749.1923
[2024-05-18 10:25:59] 2024-05-18 17:25:45,020 | INFO     | chi2: 2.890324409141667
[2024-05-18 10:25:59] 2024-05-18 17:25:45,020 | INFO     | -- intersect: -546066856749.1923
[2024-05-18 10:25:59] 2024-05-18 17:25:45,020 | INFO     | current memory leak: 318.21 B/s (using 64 data points, chi2=2.89)
[2024-05-18 10:25:59] 2024-05-18 17:25:45,021 | INFO     | ..............................
[2024-05-18 10:25:59] 2024-05-18 17:25:45,021 | INFO     | . Timing measurements:
[2024-05-18 10:25:59] 2024-05-18 17:25:45,021 | INFO     | . get job = 0 s
[2024-05-18 10:25:59] 2024-05-18 17:25:45,021 | INFO     | . initial setup = 2 s
[2024-05-18 10:25:59] 2024-05-18 17:25:45,021 | INFO     | . payload setup = 5 s
[2024-05-18 10:25:59] 2024-05-18 17:25:45,021 | INFO     | . stage-in = 0 s
[2024-05-18 10:25:59] 2024-05-18 17:25:45,022 | INFO     | . payload execution = 4276 s
[2024-05-18 10:25:59] 2024-05-18 17:25:45,022 | INFO     | . stage-out = 0 s
[2024-05-18 10:25:59] 2024-05-18 17:25:45,022 | INFO     | . log creation = 0 s
[2024-05-18 10:25:59] 2024-05-18 17:25:45,022 | INFO     | ..............................
[2024-05-18 10:25:59] 2024-05-18 17:25:45,090 | INFO     | 
[2024-05-18 10:25:59] 2024-05-18 17:25:45,090 | INFO     | job summary report
[2024-05-18 10:25:59] 2024-05-18 17:25:45,091 | INFO     | --------------------------------------------------
[2024-05-18 10:25:59] 2024-05-18 17:25:45,092 | INFO     | PanDA job id: 6208653833
[2024-05-18 10:25:59] 2024-05-18 17:25:45,092 | INFO     | task id: 38776125
[2024-05-18 10:25:59] 2024-05-18 17:25:45,092 | INFO     | errors: (none)
[2024-05-18 10:25:59] 2024-05-18 17:25:45,092 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 10:25:59] 2024-05-18 17:25:45,092 | INFO     | pilot state: finished 
[2024-05-18 10:25:59] 2024-05-18 17:25:45,092 | INFO     | transexitcode: 0
[2024-05-18 10:25:59] 2024-05-18 17:25:45,092 | INFO     | exeerrorcode: 0
[2024-05-18 10:25:59] 2024-05-18 17:25:45,092 | INFO     | exeerrordiag: 
[2024-05-18 10:25:59] 2024-05-18 17:25:45,092 | INFO     | exitcode: 0
[2024-05-18 10:25:59] 2024-05-18 17:25:45,093 | INFO     | exitmsg: OK
[2024-05-18 10:25:59] 2024-05-18 17:25:45,093 | INFO     | cpuconsumptiontime: 40033 s
[2024-05-18 10:25:59] 2024-05-18 17:25:45,093 | INFO     | nevents: 400
[2024-05-18 10:25:59] 2024-05-18 17:25:45,093 | INFO     | neventsw: 0
[2024-05-18 10:25:59] 2024-05-18 17:25:45,093 | INFO     | pid: 265374
[2024-05-18 10:25:59] 2024-05-18 17:25:45,093 | INFO     | pgrp: 265374
[2024-05-18 10:25:59] 2024-05-18 17:25:45,093 | INFO     | corecount: 12
[2024-05-18 10:25:59] 2024-05-18 17:25:45,093 | INFO     | event service: False
[2024-05-18 10:25:59] 2024-05-18 17:25:45,093 | INFO     | sizes: {0: 2392195, 1: 2392195, 5: 2392429, 11: 2392485, 4285: 2418451, 4286: 2427405, 4287: 2427589, 4293: 2427759}
[2024-05-18 10:25:59] 2024-05-18 17:25:45,094 | INFO     | --------------------------------------------------
[2024-05-18 10:25:59] 2024-05-18 17:25:45,094 | INFO     | 
[2024-05-18 10:25:59] 2024-05-18 17:25:45,094 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 10:25:59] 2024-05-18 17:25:45,165 | WARNING  | process 265374 is no longer using CPU - aborting
[2024-05-18 10:25:59] 2024-05-18 17:25:45,165 | INFO     | aborting job monitoring since job object (job id=6208653833) has expired
[2024-05-18 10:25:59] 2024-05-18 17:25:45,193 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 10:25:59] 2024-05-18 17:25:45,193 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 10:25:59] 2024-05-18 17:25:45,193 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 10:25:59] 2024-05-18 17:25:45,193 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 10:25:59] 2024-05-18 17:25:45,193 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 10:25:59] 2024-05-18 17:25:45,194 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 10:25:59] 2024-05-18 17:25:45,194 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 10:25:59] 2024-05-18 17:25:45,194 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 10:25:59] 2024-05-18 17:25:45,194 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 10:25:59] 2024-05-18 17:25:45,194 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 10:25:59] 2024-05-18 17:25:45,194 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 10:25:59] 2024-05-18 17:25:45,194 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 10:25:59] 2024-05-18 17:25:45,194 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 10:25:59] 2024-05-18 17:25:45,194 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 10:25:59] 2024-05-18 17:25:45,194 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 10:25:59] 2024-05-18 17:25:45,195 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 10:25:59] 2024-05-18 17:25:45,195 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 10:25:59] 2024-05-18 17:25:45,195 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 10:25:59] 2024-05-18 17:25:45,195 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 10:25:59] 2024-05-18 17:25:45,195 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 10:25:59] 2024-05-18 17:25:45,195 | INFO     | job 6208653833 has completed (purged errors)
[2024-05-18 10:25:59] 2024-05-18 17:25:45,195 | INFO     | overall cleanup function is called
[2024-05-18 10:25:59] 2024-05-18 17:25:46,200 | INFO     | --- collectZombieJob: --- 10, [265374]
[2024-05-18 10:25:59] 2024-05-18 17:25:46,200 | INFO     | zombie collector waiting for pid 265374
[2024-05-18 10:25:59] 2024-05-18 17:25:46,200 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 10:25:59] 2024-05-18 17:25:47,203 | INFO     | collected zombie processes
[2024-05-18 10:25:59] 2024-05-18 17:25:47,203 | INFO     | will now attempt to kill all subprocesses of pid=265374
[2024-05-18 10:25:59] 2024-05-18 17:25:47,387 | INFO     | process IDs to be killed: [265374] (in reverse order)
[2024-05-18 10:25:59] 2024-05-18 17:25:47,525 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 10:25:59] 2024-05-18 17:25:47,526 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 10:25:59] 2024-05-18 17:25:47,537 | INFO     | did not find any defunct processes belonging to 265374
[2024-05-18 10:25:59] 2024-05-18 17:25:47,546 | INFO     | did not find any defunct processes belonging to 265374
[2024-05-18 10:25:59] 2024-05-18 17:25:47,547 | INFO     | ready for new job
[2024-05-18 10:25:59] 2024-05-18 17:25:47,547 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 10:25:59] 2024-05-18 17:25:47,549 | INFO     | *************************************
[2024-05-18 10:25:59] 2024-05-18 17:25:47,549 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 10:25:59] 2024-05-18 17:25:47,549 | INFO     | *************************************
[2024-05-18 10:25:59] 2024-05-18 17:25:47,549 | INFO     | 
[2024-05-18 10:25:59] 2024-05-18 17:25:47,554 | INFO     | architecture information:
[2024-05-18 10:25:59] 2024-05-18 17:25:47,554 | INFO     | executing command: cat /etc/os-release
[2024-05-18 10:25:59] 2024-05-18 17:25:47,577 | INFO     | cat /etc/os-release:
[2024-05-18 10:25:59] NAME="CentOS Linux"
[2024-05-18 10:25:59] VERSION="7 (Core)"
[2024-05-18 10:25:59] ID="centos"
[2024-05-18 10:25:59] ID_LIKE="rhel fedora"
[2024-05-18 10:25:59] VERSION_ID="7"
[2024-05-18 10:25:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 10:25:59] ANSI_COLOR="0;31"
[2024-05-18 10:25:59] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 10:25:59] HOME_URL="https://www.centos.org/"
[2024-05-18 10:25:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 10:25:59] 
[2024-05-18 10:25:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 10:25:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 10:25:59] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 10:25:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 10:25:59] 
[2024-05-18 10:25:59] 2024-05-18 17:25:47,578 | INFO     | *************************************
[2024-05-18 10:25:59] 2024-05-18 17:25:48,081 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 10:25:59] 2024-05-18 17:25:48,109 | INFO     | sufficient remaining disk space (2207653036032 B)
[2024-05-18 10:25:59] 2024-05-18 17:25:48,109 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 10:25:59] 2024-05-18 17:25:48,110 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 10:25:59] 2024-05-18 17:25:48,110 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-18 10:25:59] 2024-05-18 17:25:48,110 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 10:25:59] 2024-05-18 17:25:48,111 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 10:25:59] 2024-05-18 17:25:48,111 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 10:25:59] 2024-05-18 17:25:48,379 | INFO     | all payload control threads have been joined
[2024-05-18 10:25:59] 2024-05-18 17:25:48,674 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 10:25:59] 2024-05-18 17:25:48,674 | INFO     | aborting loop
[2024-05-18 10:25:59] 2024-05-18 17:25:48,733 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 10:25:59] 2024-05-18 17:25:48,992 | INFO     | all data control threads have been joined
[2024-05-18 10:25:59] 2024-05-18 17:25:49,112 | INFO     | [job] retrieve thread has finished
[2024-05-18 10:25:59] 2024-05-18 17:25:49,210 | INFO     | [data] copytool_in thread has finished
[2024-05-18 10:25:59] 2024-05-18 17:25:49,214 | INFO     | all job control threads have been joined
[2024-05-18 10:25:59] 2024-05-18 17:25:49,345 | INFO     | [payload] validate_post thread has finished
[2024-05-18 10:25:59] 2024-05-18 17:25:49,385 | INFO     | [payload] control thread has finished
[2024-05-18 10:25:59] 2024-05-18 17:25:49,516 | INFO     | [payload] failed_post thread has finished
[2024-05-18 10:25:59] 2024-05-18 17:25:49,546 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 10:25:59] 2024-05-18 17:25:49,680 | INFO     | [job] job monitor thread has finished
[2024-05-18 10:25:59] 2024-05-18 17:25:49,993 | INFO     | [data] control thread has finished
[2024-05-18 10:25:59] 2024-05-18 17:25:50,059 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 10:25:59] 2024-05-18 17:25:50,102 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 10:25:59] 2024-05-18 17:25:50,219 | INFO     | [job] control thread has finished
[2024-05-18 10:25:59] 2024-05-18 17:25:50,222 | INFO     | [job] validate thread has finished
[2024-05-18 10:25:59] 2024-05-18 17:25:50,223 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 10:25:59] 2024-05-18 17:25:50,555 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 10:25:59] 2024-05-18 17:25:50,561 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 10:25:59] 2024-05-18 17:25:50,739 | INFO     | [data] copytool_out thread has finished
[2024-05-18 10:25:59] 2024-05-18 17:25:51,108 | INFO     | [job] queue monitor thread has finished
[2024-05-18 10:25:59] 2024-05-18 17:25:53,552 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 10:25:59] 2024-05-18 17:25:53,611 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139812076128064)>', '<ExcThread(monitor, started 139811520247552)>']
[2024-05-18 10:25:59] 2024-05-18 17:25:54,141 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 10:25:59] 2024-05-18 17:25:54,142 | INFO     | [monitor] control thread has ended
[2024-05-18 10:25:59] 2024-05-18 17:25:58,638 | INFO     | all workflow threads have been joined
[2024-05-18 10:25:59] 2024-05-18 17:25:58,638 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 10:25:59] 2024-05-18 17:25:58,639 | INFO     | traces error code: 0
[2024-05-18 10:25:59] 2024-05-18 17:25:58,639 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 10:25:59] 2024-05-18 17:25:58,736 [wrapper] ==== pilot stdout END ====
[2024-05-18 10:25:59] 2024-05-18 17:25:58,740 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 10:25:59] 2024-05-18 17:25:58,744 [wrapper] pilotpid: 258845
[2024-05-18 10:25:59] 2024-05-18 17:25:58,748 [wrapper] Pilot exit status: 0
[2024-05-18 10:25:59] 2024-05-18 17:25:58,761 [wrapper] pandaids: 6208653833
[2024-05-18 10:25:59] 2024-05-18 17:25:58,845 [wrapper] cleanup: SIGTERM to supervisor_pilot 115943 258846
[2024-05-18 10:25:59] 2024-05-18 17:25:58,848 [wrapper] Test setup, not cleaning
[2024-05-18 10:25:59] 2024-05-18 17:25:58,851 [wrapper] ==== wrapper stdout END ====
[2024-05-18 10:25:59] 2024-05-18 17:25:58,854 [wrapper] ==== wrapper stderr END ====
[2024-05-18 10:25:59] 2024-05-18 17:25:58,860 [wrapper] apfmon messages muted
[2024-05-18 10:25:59]  *** Error codes and diagnostics ***
[2024-05-18 10:25:59]     "exeErrorCode": 0,
[2024-05-18 10:25:59]     "exeErrorDiag": "",
[2024-05-18 10:25:59]     "pilotErrorCode": 0,
[2024-05-18 10:25:59]     "pilotErrorDiag": "",
[2024-05-18 10:25:59]  *** Listing of results directory ***
[2024-05-18 10:25:59] total 835952
[2024-05-18 10:25:59] -rw-r--r-- 1 boinc boinc    467845 May 18 01:53 pilot3.tar.gz
[2024-05-18 10:25:59] -rwx------ 1 boinc boinc     32251 May 18 02:04 runpilot2-wrapper.sh
[2024-05-18 10:25:59] -rw-r--r-- 1 boinc boinc      5633 May 18 02:04 queuedata.json
[2024-05-18 10:25:59] -rw-r--r-- 1 boinc boinc       100 May 18 09:13 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 10:25:59] -rwxr-xr-x 1 boinc boinc      7986 May 18 09:13 run_atlas
[2024-05-18 10:25:59] -rw-r--r-- 1 boinc boinc       105 May 18 09:13 job.xml
[2024-05-18 10:25:59] -rw-r--r-- 2 boinc boinc 604075659 May 18 09:13 EVNT.38776119._000467.pool.root.1
[2024-05-18 10:25:59] -rw-r--r-- 2 boinc boinc     17537 May 18 09:13 start_atlas.sh
[2024-05-18 10:25:59] drwxrwx--x 2 boinc boinc      4096 May 18 09:13 shared
[2024-05-18 10:25:59] -rw-r--r-- 2 boinc boinc    480005 May 18 09:13 input.tar.gz
[2024-05-18 10:25:59] -rw-r--r-- 1 boinc boinc      6622 May 18 09:13 init_data.xml
[2024-05-18 10:25:59] -rw-r--r-- 1 boinc boinc         0 May 18 09:13 boinc_lockfile
[2024-05-18 10:25:59] -rw-r--r-- 1 boinc boinc      2635 May 18 09:13 pandaJob.out
[2024-05-18 10:25:59] -rw------- 1 boinc boinc       424 May 18 09:13 setup.sh.local
[2024-05-18 10:25:59] -rw------- 1 boinc boinc   1019426 May 18 09:13 agis_schedconf.cvmfs.json
[2024-05-18 10:25:59] -rw------- 1 boinc boinc         0 May 18 09:13 agis_ddmendpoints.agis.ALL.json
[2024-05-18 10:25:59] -rw------- 1 boinc boinc   1324701 May 18 09:13 cric_ddmendpoints.json
[2024-05-18 10:25:59] drwx------ 4 boinc boinc      4096 May 18 09:13 pilot3
[2024-05-18 10:25:59] -rw------- 1 boinc boinc 246840560 May 18 10:24 HITS.38776125._016260.pool.root.1
[2024-05-18 10:25:59] -rw------- 1 boinc boinc        95 May 18 10:25 pilot_heartbeat.json
[2024-05-18 10:25:59] -rw-r--r-- 1 boinc boinc       530 May 18 10:25 boinc_task_state.xml
[2024-05-18 10:25:59] -rw------- 1 boinc boinc      1049 May 18 10:25 memory_monitor_summary.json
[2024-05-18 10:25:59] -rw------- 1 boinc boinc    353260 May 18 10:25 log.38776125._016260.job.log.tgz.1
[2024-05-18 10:25:59] -rw------- 1 boinc boinc      7765 May 18 10:25 heartbeat.json
[2024-05-18 10:25:59] -rw-r--r-- 1 boinc boinc      8192 May 18 10:25 boinc_mmap_file
[2024-05-18 10:25:59] -rw-r--r-- 1 boinc boinc        27 May 18 10:25 wrapper_checkpoint.txt
[2024-05-18 10:25:59] -rw------- 1 boinc boinc      4333 May 18 10:25 pilotlog.txt
[2024-05-18 10:25:59] -rw------- 1 boinc boinc    430151 May 18 10:25 log.38776125._016260.job.log.1
[2024-05-18 10:25:59] -rw------- 1 boinc boinc       357 May 18 10:25 output.list
[2024-05-18 10:25:59] -rw-r--r-- 1 boinc boinc       620 May 18 10:25 runtime_log
[2024-05-18 10:25:59] -rw------- 1 boinc boinc    798720 May 18 10:25 result.tar.gz
[2024-05-18 10:25:59] -rw-r--r-- 1 boinc boinc     11286 May 18 10:25 runtime_log.err
[2024-05-18 10:25:59] -rw------- 1 boinc boinc       651 May 18 10:25 o8uLDmBAVS5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmKsLKDmRL256m.diag
[2024-05-18 10:25:59] -rw-r--r-- 1 boinc boinc     21314 May 18 10:25 stderr.txt
[2024-05-18 10:25:59] HITS file was successfully produced:
[2024-05-18 10:25:59] -rw------- 1 boinc boinc 246840560 May 18 10:24 shared/HITS.pool.root.1
[2024-05-18 10:25:59]  *** Contents of shared directory: ***
[2024-05-18 10:25:59] total 832256
[2024-05-18 10:25:59] -rw-r--r-- 2 boinc boinc 604075659 May 18 09:13 ATLAS.root_0
[2024-05-18 10:25:59] -rw-r--r-- 2 boinc boinc     17537 May 18 09:13 start_atlas.sh
[2024-05-18 10:25:59] -rw-r--r-- 2 boinc boinc    480005 May 18 09:13 input.tar.gz
[2024-05-18 10:25:59] -rw------- 1 boinc boinc 246840560 May 18 10:24 HITS.pool.root.1
[2024-05-18 10:25:59] -rw------- 1 boinc boinc    798720 May 18 10:25 result.tar.gz
10:26:00 (254615): run_atlas exited; CPU time 39905.073051
10:26:00 (254615): called boinc_finish(0)

</stderr_txt>
]]>

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