Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
17:18:10 (36949): wrapper (7.7.26015): starting
17:18:10 (36949): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 17:18:10] Arguments: --nthreads 12
[2024-05-18 17:18:10] Threads: 12
[2024-05-18 17:18:10] Checking for CVMFS
[2024-05-18 17:18:10] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 17:18:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 17:18:10] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 17:18:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 17:18:11] 2.10.1.0 8551 185628 144612 132895 1 109 45481184 45568001 6823 130560 0 606716554 99.736 435166498 4032 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-05-18 17:18:11] CVMFS is ok
[2024-05-18 17:18:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 17:18:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 17:18:11] Further information can be found at the LHC@home message board.
[2024-05-18 17:18:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 17:18:11] Checking for apptainer binary...
[2024-05-18 17:18:11] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 17:18:11] Running /usr/bin/apptainer --version
[2024-05-18 17:18:11] apptainer version 1.1.8-1.el7
[2024-05-18 17:18:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 17:18:12] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0031.triumf.lcg
[2024-05-18 17:18:12] apptainer works
[2024-05-18 17:18:12] Set ATHENA_PROC_NUMBER=12
[2024-05-18 17:18:12] Set ATHENA_CORE_NUMBER=12
[2024-05-18 17:18:12] Starting ATLAS job with PandaID=6208653774
[2024-05-18 17:18:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 18:44:03]  *** The last 200 lines of the pilot log: ***
[2024-05-18 18:44:03]  filesize=378270
[2024-05-18 18:44:03]  filetype=log
[2024-05-18 18:44:03]  guid=f532e238-1fdc-4e92-9479-cc29f32f2ee7
[2024-05-18 18:44:03]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-18 18:44:03]  is_tar=False
[2024-05-18 18:44:03]  lfn=log.38776125._016201.job.log.tgz.1
[2024-05-18 18:44:03]  mtime=0
[2024-05-18 18:44:03]  protocol_id=None
[2024-05-18 18:44:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-18 18:44:03]  replicas=None
[2024-05-18 18:44:03]  scope=mc23_13p6TeV
[2024-05-18 18:44:03]  status=None
[2024-05-18 18:44:03]  status_code=0
[2024-05-18 18:44:03]  storage_token=
[2024-05-18 18:44:03]  surl=/home/boinc/slots/0/PanDA_Pilot-6208653774/log.38776125._016201.job.log.tgz.1
[2024-05-18 18:44:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4d/53/log.38776125._016201.job.log.tgz.1
[2024-05-18 18:44:03]  workdir=None
[2024-05-18 18:44:03] ]
[2024-05-18 18:44:03] 2024-05-19 01:43:33,118 | INFO     | transferring file log.38776125._016201.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6208653774/log.38776125._016201.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-18 18:44:03] 2024-05-19 01:43:33,118 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6208653774/log.38776125._016201.job.log.tgz.1 /home/boinc/slots/0/log.38776125._016201.job.log.t
[2024-05-18 18:44:03] 2024-05-19 01:43:33,156 | INFO     | adding to output.list: log.38776125._016201.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4d/53/log.38776125._016201.job.log.tg
[2024-05-18 18:44:03] 2024-05-19 01:43:33,158 | INFO     | summary of transferred files:
[2024-05-18 18:44:03] 2024-05-19 01:43:33,158 | INFO     |  -- lfn=log.38776125._016201.job.log.tgz.1, status_code=0, status=transferred
[2024-05-18 18:44:03] 2024-05-19 01:43:33,158 | INFO     | stage-out finished correctly
[2024-05-18 18:44:03] 2024-05-19 01:43:35,157 | INFO     | monitor loop #379: job 0:6208653774 is in state 'finished'
[2024-05-18 18:44:03] 2024-05-19 01:43:35,157 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 18:44:03] 2024-05-19 01:43:36,661 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-18 18:44:03] 2024-05-19 01:43:37,661 | INFO     | monitor loop #380: job 0:6208653774 is in state 'finished'
[2024-05-18 18:44:03] 2024-05-19 01:43:37,661 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 18:44:03] 2024-05-19 01:43:38,867 | INFO     | job 6208653774 has state=finished
[2024-05-18 18:44:03] 2024-05-19 01:43:38,867 | INFO     | preparing for final server update for job 6208653774 in state='finished'
[2024-05-18 18:44:03] 2024-05-19 01:43:38,868 | INFO     | this job has now completed (state=finished)
[2024-05-18 18:44:03] 2024-05-19 01:43:38,868 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-18 18:44:03] 2024-05-19 01:43:38,869 | INFO     | job 6208653774 has finished - writing final server update
[2024-05-18 18:44:03] 2024-05-19 01:43:38,869 | INFO     | total number of processed events: 400 (read)
[2024-05-18 18:44:03] 2024-05-19 01:43:38,875 | INFO     | executing command: lscpu
[2024-05-18 18:44:03] 2024-05-19 01:43:38,942 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-18 18:44:03] 2024-05-19 01:43:38,942 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 18:44:03] 2024-05-19 01:43:38,999 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 18:44:03] 2024-05-19 01:43:40,164 | INFO     | monitor loop #381: job 0:6208653774 is in state 'finished'
[2024-05-18 18:44:03] 2024-05-19 01:43:40,164 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 18:44:03] 2024-05-19 01:43:42,400 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-18 18:44:03] 2024-05-19 01:43:42,400 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6208653774/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 18:44:03] 2024-05-19 01:43:42,401 | INFO     | extracted standard info from prmon json
[2024-05-18 18:44:03] 2024-05-19 01:43:42,401 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 18:44:03] 2024-05-19 01:43:42,401 | WARNING  | GPU info not found in prmon json
[2024-05-18 18:44:03] 2024-05-19 01:43:42,401 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 18:44:03] 2024-05-19 01:43:42,401 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 18:44:03] 2024-05-19 01:43:42,402 | INFO     | fitting pss+swap vs Time
[2024-05-18 18:44:03] 2024-05-19 01:43:42,403 | INFO     | model: linear, x: [1716078231.0, 1716078292.0, 1716078353.0, 1716078414.0, 1716078475.0, 1716078536.0, 1716078597.0, 1716078658.0, 1716078719.0, 1716078780.0, 1716
[2024-05-18 18:44:03] 2024-05-19 01:43:42,403 | INFO     | sum of square deviations: 141512990.6753248
[2024-05-18 18:44:03] 2024-05-19 01:43:42,403 | INFO     | sum of deviations: 19753355648.44156
[2024-05-18 18:44:03] 2024-05-19 01:43:42,403 | INFO     | mean x: 1716080549.2077923
[2024-05-18 18:44:03] 2024-05-19 01:43:42,403 | INFO     | mean y: 2747012.5974025973
[2024-05-18 18:44:03] 2024-05-19 01:43:42,403 | INFO     | -- intersect: -239539568135.33047
[2024-05-18 18:44:03] 2024-05-19 01:43:42,403 | INFO     | intersect: -239539568135.33047
[2024-05-18 18:44:03] 2024-05-19 01:43:42,403 | INFO     | chi2: 2.582314246672977
[2024-05-18 18:44:03] 2024-05-19 01:43:42,403 | INFO     | -- intersect: -239539568135.33047
[2024-05-18 18:44:03] 2024-05-19 01:43:42,403 | INFO     | current memory leak: 139.59 B/s (using 77 data points, chi2=2.58)
[2024-05-18 18:44:03] 2024-05-19 01:43:42,404 | INFO     | ..............................
[2024-05-18 18:44:03] 2024-05-19 01:43:42,404 | INFO     | . Timing measurements:
[2024-05-18 18:44:03] 2024-05-19 01:43:42,404 | INFO     | . get job = 0 s
[2024-05-18 18:44:03] 2024-05-19 01:43:42,404 | INFO     | . initial setup = 2 s
[2024-05-18 18:44:03] 2024-05-19 01:43:42,404 | INFO     | . payload setup = 4 s
[2024-05-18 18:44:03] 2024-05-19 01:43:42,404 | INFO     | . stage-in = 0 s
[2024-05-18 18:44:03] 2024-05-19 01:43:42,404 | INFO     | . payload execution = 5085 s
[2024-05-18 18:44:03] 2024-05-19 01:43:42,404 | INFO     | . stage-out = 1 s
[2024-05-18 18:44:03] 2024-05-19 01:43:42,404 | INFO     | . log creation = 0 s
[2024-05-18 18:44:03] 2024-05-19 01:43:42,404 | INFO     | ..............................
[2024-05-18 18:44:03] 2024-05-19 01:43:42,453 | INFO     | 
[2024-05-18 18:44:03] 2024-05-19 01:43:42,453 | INFO     | job summary report
[2024-05-18 18:44:03] 2024-05-19 01:43:42,453 | INFO     | --------------------------------------------------
[2024-05-18 18:44:03] 2024-05-19 01:43:42,453 | INFO     | PanDA job id: 6208653774
[2024-05-18 18:44:03] 2024-05-19 01:43:42,453 | INFO     | task id: 38776125
[2024-05-18 18:44:03] 2024-05-19 01:43:42,453 | INFO     | errors: (none)
[2024-05-18 18:44:03] 2024-05-19 01:43:42,453 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 18:44:03] 2024-05-19 01:43:42,453 | INFO     | pilot state: finished 
[2024-05-18 18:44:03] 2024-05-19 01:43:42,453 | INFO     | transexitcode: 0
[2024-05-18 18:44:03] 2024-05-19 01:43:42,454 | INFO     | exeerrorcode: 0
[2024-05-18 18:44:03] 2024-05-19 01:43:42,454 | INFO     | exeerrordiag: 
[2024-05-18 18:44:03] 2024-05-19 01:43:42,454 | INFO     | exitcode: 0
[2024-05-18 18:44:03] 2024-05-19 01:43:42,454 | INFO     | exitmsg: OK
[2024-05-18 18:44:03] 2024-05-19 01:43:42,454 | INFO     | cpuconsumptiontime: 32280 s
[2024-05-18 18:44:03] 2024-05-19 01:43:42,454 | INFO     | nevents: 400
[2024-05-18 18:44:03] 2024-05-19 01:43:42,454 | INFO     | neventsw: 0
[2024-05-18 18:44:03] 2024-05-19 01:43:42,454 | INFO     | pid: 47497
[2024-05-18 18:44:03] 2024-05-19 01:43:42,454 | INFO     | pgrp: 47497
[2024-05-18 18:44:03] 2024-05-19 01:43:42,454 | INFO     | corecount: 12
[2024-05-18 18:44:03] 2024-05-19 01:43:42,454 | INFO     | event service: False
[2024-05-18 18:44:03] 2024-05-19 01:43:42,454 | INFO     | sizes: {0: 2392025, 1: 2392224, 5: 2392430, 11: 2392486, 5094: 2418757, 5096: 2427711, 5100: 2427895, 5106: 2428065}
[2024-05-18 18:44:03] 2024-05-19 01:43:42,454 | INFO     | --------------------------------------------------
[2024-05-18 18:44:03] 2024-05-19 01:43:42,454 | INFO     | 
[2024-05-18 18:44:03] 2024-05-19 01:43:42,454 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 18:44:03] 2024-05-19 01:43:42,483 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 18:44:03] 2024-05-19 01:43:42,484 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 18:44:03] 2024-05-19 01:43:42,484 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 18:44:03] 2024-05-19 01:43:42,484 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 18:44:03] 2024-05-19 01:43:42,484 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 18:44:03] 2024-05-19 01:43:42,484 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 18:44:03] 2024-05-19 01:43:42,484 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 18:44:03] 2024-05-19 01:43:42,484 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 18:44:03] 2024-05-19 01:43:42,484 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 18:44:03] 2024-05-19 01:43:42,484 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 18:44:03] 2024-05-19 01:43:42,484 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 18:44:03] 2024-05-19 01:43:42,484 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 18:44:03] 2024-05-19 01:43:42,484 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 18:44:03] 2024-05-19 01:43:42,484 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 18:44:03] 2024-05-19 01:43:42,484 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 18:44:03] 2024-05-19 01:43:42,484 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 18:44:03] 2024-05-19 01:43:42,485 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 18:44:03] 2024-05-19 01:43:42,485 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 18:44:03] 2024-05-19 01:43:42,485 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 18:44:03] 2024-05-19 01:43:42,485 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 18:44:03] 2024-05-19 01:43:42,485 | INFO     | job 6208653774 has completed (purged errors)
[2024-05-18 18:44:03] 2024-05-19 01:43:42,485 | INFO     | overall cleanup function is called
[2024-05-18 18:44:03] 2024-05-19 01:43:43,492 | INFO     | --- collectZombieJob: --- 10, [47497]
[2024-05-18 18:44:03] 2024-05-19 01:43:43,493 | INFO     | zombie collector waiting for pid 47497
[2024-05-18 18:44:03] 2024-05-19 01:43:43,493 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 18:44:03] 2024-05-19 01:43:44,499 | INFO     | collected zombie processes
[2024-05-18 18:44:03] 2024-05-19 01:43:44,499 | INFO     | will now attempt to kill all subprocesses of pid=47497
[2024-05-18 18:44:03] 2024-05-19 01:43:44,624 | INFO     | process IDs to be killed: [47497] (in reverse order)
[2024-05-18 18:44:03] 2024-05-19 01:43:44,730 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 18:44:03] 2024-05-19 01:43:44,730 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 18:44:03] 2024-05-19 01:43:44,736 | INFO     | did not find any defunct processes belonging to 47497
[2024-05-18 18:44:03] 2024-05-19 01:43:44,740 | INFO     | did not find any defunct processes belonging to 47497
[2024-05-18 18:44:03] 2024-05-19 01:43:44,740 | INFO     | ready for new job
[2024-05-18 18:44:03] 2024-05-19 01:43:44,740 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 18:44:03] 2024-05-19 01:43:44,742 | INFO     | *************************************
[2024-05-18 18:44:03] 2024-05-19 01:43:44,742 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 18:44:03] 2024-05-19 01:43:44,742 | INFO     | *************************************
[2024-05-18 18:44:03] 2024-05-19 01:43:44,742 | INFO     | 
[2024-05-18 18:44:03] 2024-05-19 01:43:44,745 | INFO     | architecture information:
[2024-05-18 18:44:03] 2024-05-19 01:43:44,745 | INFO     | executing command: cat /etc/os-release
[2024-05-18 18:44:03] 2024-05-19 01:43:44,766 | INFO     | cat /etc/os-release:
[2024-05-18 18:44:03] NAME="CentOS Linux"
[2024-05-18 18:44:03] VERSION="7 (Core)"
[2024-05-18 18:44:03] ID="centos"
[2024-05-18 18:44:03] ID_LIKE="rhel fedora"
[2024-05-18 18:44:03] VERSION_ID="7"
[2024-05-18 18:44:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 18:44:03] ANSI_COLOR="0;31"
[2024-05-18 18:44:03] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 18:44:03] HOME_URL="https://www.centos.org/"
[2024-05-18 18:44:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 18:44:03] 
[2024-05-18 18:44:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 18:44:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 18:44:03] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 18:44:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 18:44:03] 
[2024-05-18 18:44:03] 2024-05-19 01:43:44,766 | INFO     | *************************************
[2024-05-18 18:44:03] 2024-05-19 01:43:45,269 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 18:44:03] 2024-05-19 01:43:45,296 | INFO     | sufficient remaining disk space (2229656354816 B)
[2024-05-18 18:44:03] 2024-05-19 01:43:45,297 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 18:44:03] 2024-05-19 01:43:45,297 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 18:44:03] 2024-05-19 01:43:45,319 | INFO     | all job control threads have been joined
[2024-05-18 18:44:03] 2024-05-19 01:43:45,834 | INFO     | all data control threads have been joined
[2024-05-18 18:44:03] 2024-05-19 01:43:46,179 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 18:44:03] 2024-05-19 01:43:46,180 | INFO     | aborting loop
[2024-05-18 18:44:03] 2024-05-19 01:43:46,243 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 18:44:03] 2024-05-19 01:43:46,244 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 18:44:03] 2024-05-19 01:43:46,244 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 18:44:03] 2024-05-19 01:43:46,270 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 18:44:03] 2024-05-19 01:43:46,300 | INFO     | [job] retrieve thread has finished
[2024-05-18 18:44:03] 2024-05-19 01:43:46,325 | INFO     | [job] control thread has finished
[2024-05-18 18:44:03] 2024-05-19 01:43:46,364 | INFO     | [payload] validate_post thread has finished
[2024-05-18 18:44:03] 2024-05-19 01:43:46,385 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 18:44:03] 2024-05-19 01:43:46,672 | INFO     | all payload control threads have been joined
[2024-05-18 18:44:03] 2024-05-19 01:43:46,760 | INFO     | [payload] failed_post thread has finished
[2024-05-18 18:44:03] 2024-05-19 01:43:46,766 | INFO     | [data] copytool_in thread has finished
[2024-05-18 18:44:03] 2024-05-19 01:43:46,827 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 18:44:03] 2024-05-19 01:43:46,840 | INFO     | [data] control thread has finished
[2024-05-18 18:44:03] 2024-05-19 01:43:46,866 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 18:44:03] 2024-05-19 01:43:47,180 | INFO     | [job] job monitor thread has finished
[2024-05-18 18:44:03] 2024-05-19 01:43:47,189 | INFO     | [job] validate thread has finished
[2024-05-18 18:44:03] 2024-05-19 01:43:47,251 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 18:44:03] 2024-05-19 01:43:47,464 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 18:44:03] 2024-05-19 01:43:47,677 | INFO     | [payload] control thread has finished
[2024-05-18 18:44:03] 2024-05-19 01:43:48,275 | INFO     | [data] copytool_out thread has finished
[2024-05-18 18:44:03] 2024-05-19 01:43:48,470 | INFO     | [job] queue monitor thread has finished
[2024-05-18 18:44:03] 2024-05-19 01:43:51,257 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 18:44:03] 2024-05-19 01:43:55,603 | INFO     | job.realtimelogging is not enabled
[2024-05-18 18:44:03] 2024-05-19 01:43:56,609 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 18:44:03] 2024-05-19 01:43:57,533 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139973621811008)>', '<ExcThread(monitor, started 139973118392064)>']
[2024-05-18 18:44:03] 2024-05-19 01:43:58,298 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 18:44:03] 2024-05-19 01:43:58,298 | INFO     | [monitor] control thread has ended
[2024-05-18 18:44:03] 2024-05-19 01:44:02,559 | INFO     | all workflow threads have been joined
[2024-05-18 18:44:03] 2024-05-19 01:44:02,559 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 18:44:03] 2024-05-19 01:44:02,560 | INFO     | traces error code: 0
[2024-05-18 18:44:03] 2024-05-19 01:44:02,560 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 18:44:03] 2024-05-19 01:44:02,654 [wrapper] ==== pilot stdout END ====
[2024-05-18 18:44:03] 2024-05-19 01:44:02,658 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 18:44:03] 2024-05-19 01:44:02,661 [wrapper] pilotpid: 41090
[2024-05-18 18:44:03] 2024-05-19 01:44:02,664 [wrapper] Pilot exit status: 0
[2024-05-18 18:44:03] 2024-05-19 01:44:02,677 [wrapper] pandaids: 6208653774
[2024-05-18 18:44:03] 2024-05-19 01:44:02,743 [wrapper] cleanup: SIGTERM to supervisor_pilot 100371 41091
[2024-05-18 18:44:03] 2024-05-19 01:44:02,747 [wrapper] Test setup, not cleaning
[2024-05-18 18:44:03] 2024-05-19 01:44:02,749 [wrapper] ==== wrapper stdout END ====
[2024-05-18 18:44:03] 2024-05-19 01:44:02,751 [wrapper] ==== wrapper stderr END ====
[2024-05-18 18:44:03] 2024-05-19 01:44:02,754 [wrapper] apfmon messages muted
[2024-05-18 18:44:03]  *** Error codes and diagnostics ***
[2024-05-18 18:44:03]     "exeErrorCode": 0,
[2024-05-18 18:44:03]     "exeErrorDiag": "",
[2024-05-18 18:44:03]     "pilotErrorCode": 0,
[2024-05-18 18:44:03]     "pilotErrorDiag": "",
[2024-05-18 18:44:03]  *** Listing of results directory ***
[2024-05-18 18:44:03] total 830456
[2024-05-18 18:44:03] -rw-r--r-- 1 boinc boinc      5633 May 18 01:50 queuedata.json
[2024-05-18 18:44:03] -rw-r--r-- 1 boinc boinc    467845 May 18 01:50 pilot3.tar.gz
[2024-05-18 18:44:03] -rwx------ 1 boinc boinc     32251 May 18 01:51 runpilot2-wrapper.sh
[2024-05-18 18:44:03] -rw-r--r-- 1 boinc boinc       100 May 18 17:18 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 18:44:03] -rwxr-xr-x 1 boinc boinc      7986 May 18 17:18 run_atlas
[2024-05-18 18:44:03] -rw-r--r-- 1 boinc boinc       105 May 18 17:18 job.xml
[2024-05-18 18:44:03] -rw-r--r-- 2 boinc boinc 602784539 May 18 17:18 EVNT.38776119._000464.pool.root.1
[2024-05-18 18:44:03] -rw-r--r-- 1 boinc boinc      6627 May 18 17:18 init_data.xml
[2024-05-18 18:44:03] -rw-r--r-- 2 boinc boinc     17537 May 18 17:18 start_atlas.sh
[2024-05-18 18:44:03] drwxrwx--x 2 boinc boinc      4096 May 18 17:18 shared
[2024-05-18 18:44:03] -rw-r--r-- 2 boinc boinc    480009 May 18 17:18 input.tar.gz
[2024-05-18 18:44:03] -rw-r--r-- 1 boinc boinc         0 May 18 17:18 boinc_lockfile
[2024-05-18 18:44:03] -rw-r--r-- 1 boinc boinc      2636 May 18 17:18 pandaJob.out
[2024-05-18 18:44:03] -rw------- 1 boinc boinc       424 May 18 17:18 setup.sh.local
[2024-05-18 18:44:03] -rw------- 1 boinc boinc   1013712 May 18 17:18 agis_schedconf.cvmfs.json
[2024-05-18 18:44:03] -rw------- 1 boinc boinc         0 May 18 17:18 agis_ddmendpoints.agis.ALL.json
[2024-05-18 18:44:03] -rw------- 1 boinc boinc   1324701 May 18 17:18 cric_ddmendpoints.json
[2024-05-18 18:44:03] drwx------ 4 boinc boinc      4096 May 18 17:18 pilot3
[2024-05-18 18:44:03] -rw------- 1 boinc boinc 242349272 May 18 18:42 HITS.38776125._016201.pool.root.1
[2024-05-18 18:44:03] -rw-r--r-- 1 boinc boinc       531 May 18 18:42 boinc_task_state.xml
[2024-05-18 18:44:03] -rw------- 1 boinc boinc      1050 May 18 18:43 memory_monitor_summary.json
[2024-05-18 18:44:03] -rw------- 1 boinc boinc    378270 May 18 18:43 log.38776125._016201.job.log.tgz.1
[2024-05-18 18:44:03] -rw------- 1 boinc boinc        95 May 18 18:43 pilot_heartbeat.json
[2024-05-18 18:44:03] -rw------- 1 boinc boinc      7766 May 18 18:43 heartbeat.json
[2024-05-18 18:44:03] -rw-r--r-- 1 boinc boinc      8192 May 18 18:43 boinc_mmap_file
[2024-05-18 18:44:03] -rw-r--r-- 1 boinc boinc        27 May 18 18:43 wrapper_checkpoint.txt
[2024-05-18 18:44:03] -rw------- 1 boinc boinc      4282 May 18 18:44 pilotlog.txt
[2024-05-18 18:44:03] -rw------- 1 boinc boinc    480101 May 18 18:44 log.38776125._016201.job.log.1
[2024-05-18 18:44:03] -rw------- 1 boinc boinc       357 May 18 18:44 output.list
[2024-05-18 18:44:03] -rw-r--r-- 1 boinc boinc       620 May 18 18:44 runtime_log
[2024-05-18 18:44:03] -rw------- 1 boinc boinc    880640 May 18 18:44 result.tar.gz
[2024-05-18 18:44:03] -rw-r--r-- 1 boinc boinc     11286 May 18 18:44 runtime_log.err
[2024-05-18 18:44:03] -rw------- 1 boinc boinc       653 May 18 18:44 7apMDmZxUS5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmmrLKDm20kp5m.diag
[2024-05-18 18:44:03] -rw-r--r-- 1 boinc boinc     21618 May 18 18:44 stderr.txt
[2024-05-18 18:44:03] HITS file was successfully produced:
[2024-05-18 18:44:03] -rw------- 1 boinc boinc 242349272 May 18 18:42 shared/HITS.pool.root.1
[2024-05-18 18:44:03]  *** Contents of shared directory: ***
[2024-05-18 18:44:03] total 826692
[2024-05-18 18:44:03] -rw-r--r-- 2 boinc boinc 602784539 May 18 17:18 ATLAS.root_0
[2024-05-18 18:44:03] -rw-r--r-- 2 boinc boinc     17537 May 18 17:18 start_atlas.sh
[2024-05-18 18:44:03] -rw-r--r-- 2 boinc boinc    480009 May 18 17:18 input.tar.gz
[2024-05-18 18:44:03] -rw------- 1 boinc boinc 242349272 May 18 18:42 HITS.pool.root.1
[2024-05-18 18:44:03] -rw------- 1 boinc boinc    880640 May 18 18:44 result.tar.gz
18:44:05 (36949): run_atlas exited; CPU time 32123.226593
18:44:05 (36949): called boinc_finish(0)

</stderr_txt>
]]>

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