Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
20:39:48 (243233): wrapper (7.7.26015): starting
20:39:48 (243233): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 20:39:48] Arguments: --nthreads 12
[2024-05-18 20:39:48] Threads: 12
[2024-05-18 20:39:48] Checking for CVMFS
[2024-05-18 20:39:48] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 20:39:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 20:39:48] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 20:39:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 20:39:48] 2.9.2.0 179502 185827 129344 132900 3 215 44406074 45568001 10477 130560 0 1241507650 99.803 705722609 18648 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-05-18 20:39:48] CVMFS is ok
[2024-05-18 20:39:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 20:39:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 20:39:48] Further information can be found at the LHC@home message board.
[2024-05-18 20:39:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 20:39:48] Checking for apptainer binary...
[2024-05-18 20:39:48] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 20:39:48] Running /usr/bin/apptainer --version
[2024-05-18 20:39:48] apptainer version 1.1.8-1.el7
[2024-05-18 20:39:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 20:39:49] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0169.triumf.lcg
[2024-05-18 20:39:49] apptainer works
[2024-05-18 20:39:49] Set ATHENA_PROC_NUMBER=12
[2024-05-18 20:39:49] Set ATHENA_CORE_NUMBER=12
[2024-05-18 20:39:49] Starting ATLAS job with PandaID=6208638769
[2024-05-18 20:39:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 21:51:02]  *** The last 200 lines of the pilot log: ***
[2024-05-18 21:51:02]  filetype=log
[2024-05-18 21:51:02]  guid=5e2531d9-12c3-452a-8fbb-2c8924913bdb
[2024-05-18 21:51:02]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-18 21:51:02]  is_tar=False
[2024-05-18 21:51:02]  lfn=log.38776104._016795.job.log.tgz.1
[2024-05-18 21:51:02]  mtime=0
[2024-05-18 21:51:02]  protocol_id=None
[2024-05-18 21:51:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-18 21:51:02]  replicas=None
[2024-05-18 21:51:02]  scope=mc23_13p6TeV
[2024-05-18 21:51:02]  status=None
[2024-05-18 21:51:02]  status_code=0
[2024-05-18 21:51:02]  storage_token=
[2024-05-18 21:51:02]  surl=/home/boinc/slots/0/PanDA_Pilot-6208638769/log.38776104._016795.job.log.tgz.1
[2024-05-18 21:51:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/68/99/log.38776104._016795.job.log.tgz.1
[2024-05-18 21:51:02]  workdir=None
[2024-05-18 21:51:02] ]
[2024-05-18 21:51:02] 2024-05-19 04:50:32,449 | INFO     | transferring file log.38776104._016795.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6208638769/log.38776104._016795.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-18 21:51:02] 2024-05-19 04:50:32,449 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6208638769/log.38776104._016795.job.log.tgz.1 /home/boinc/slots/0/log.38776104._016795.job.log.t
[2024-05-18 21:51:02] 2024-05-19 04:50:32,489 | INFO     | adding to output.list: log.38776104._016795.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/68/99/log.38776104._016795.job.log.tg
[2024-05-18 21:51:02] 2024-05-19 04:50:32,490 | INFO     | summary of transferred files:
[2024-05-18 21:51:02] 2024-05-19 04:50:32,490 | INFO     |  -- lfn=log.38776104._016795.job.log.tgz.1, status_code=0, status=transferred
[2024-05-18 21:51:02] 2024-05-19 04:50:32,490 | INFO     | stage-out finished correctly
[2024-05-18 21:51:02] 2024-05-19 04:50:33,618 | INFO     | monitor loop #304: job 0:6208638769 is in state 'finished'
[2024-05-18 21:51:02] 2024-05-19 04:50:33,619 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 21:51:02] 2024-05-19 04:50:35,387 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-18 21:51:02] 2024-05-19 04:50:35,471 | INFO     | job 6208638769 has state=finished
[2024-05-18 21:51:02] 2024-05-19 04:50:35,471 | INFO     | preparing for final server update for job 6208638769 in state='finished'
[2024-05-18 21:51:02] 2024-05-19 04:50:35,472 | INFO     | this job has now completed (state=finished)
[2024-05-18 21:51:02] 2024-05-19 04:50:35,472 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-18 21:51:02] 2024-05-19 04:50:35,472 | INFO     | job 6208638769 has finished - writing final server update
[2024-05-18 21:51:02] 2024-05-19 04:50:35,472 | INFO     | total number of processed events: 400 (read)
[2024-05-18 21:51:02] 2024-05-19 04:50:35,476 | INFO     | executing command: lscpu
[2024-05-18 21:51:02] 2024-05-19 04:50:35,524 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-18 21:51:02] 2024-05-19 04:50:35,524 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 21:51:02] 2024-05-19 04:50:35,581 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 21:51:02] 2024-05-19 04:50:36,122 | INFO     | monitor loop #305: job 0:6208638769 is in state 'finished'
[2024-05-18 21:51:02] 2024-05-19 04:50:36,122 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 21:51:02] 2024-05-19 04:50:38,625 | INFO     | monitor loop #306: job 0:6208638769 is in state 'finished'
[2024-05-18 21:51:02] 2024-05-19 04:50:38,625 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 21:51:02] 2024-05-19 04:50:40,000 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-18 21:51:02] 2024-05-19 04:50:40,001 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6208638769/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 21:51:02] 2024-05-19 04:50:40,002 | INFO     | extracted standard info from prmon json
[2024-05-18 21:51:02] 2024-05-19 04:50:40,002 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 21:51:02] 2024-05-19 04:50:40,002 | WARNING  | GPU info not found in prmon json
[2024-05-18 21:51:02] 2024-05-19 04:50:40,002 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 21:51:02] 2024-05-19 04:50:40,002 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 21:51:02] 2024-05-19 04:50:40,003 | INFO     | fitting pss+swap vs Time
[2024-05-18 21:51:02] 2024-05-19 04:50:40,003 | INFO     | model: linear, x: [1716090336.0, 1716090397.0, 1716090458.0, 1716090519.0, 1716090580.0, 1716090641.0, 1716090702.0, 1716090763.0, 1716090824.0, 1716090885.0, 1716
[2024-05-18 21:51:02] 2024-05-19 04:50:40,003 | INFO     | sum of square deviations: 73895205.5483871
[2024-05-18 21:51:02] 2024-05-19 04:50:40,004 | INFO     | sum of deviations: 16007774136.29031
[2024-05-18 21:51:02] 2024-05-19 04:50:40,004 | INFO     | mean x: 1716092196.6774194
[2024-05-18 21:51:02] 2024-05-19 04:50:40,004 | INFO     | mean y: 2650048.064516129
[2024-05-18 21:51:02] 2024-05-19 04:50:40,004 | INFO     | -- intersect: -371751052747.6377
[2024-05-18 21:51:02] 2024-05-19 04:50:40,004 | INFO     | intersect: -371751052747.6377
[2024-05-18 21:51:02] 2024-05-19 04:50:40,004 | INFO     | chi2: 2.4413079672695126
[2024-05-18 21:51:02] 2024-05-19 04:50:40,004 | INFO     | -- intersect: -371751052747.6377
[2024-05-18 21:51:02] 2024-05-19 04:50:40,004 | INFO     | current memory leak: 216.63 B/s (using 62 data points, chi2=2.44)
[2024-05-18 21:51:02] 2024-05-19 04:50:40,004 | INFO     | ..............................
[2024-05-18 21:51:02] 2024-05-19 04:50:40,004 | INFO     | . Timing measurements:
[2024-05-18 21:51:02] 2024-05-19 04:50:40,004 | INFO     | . get job = 0 s
[2024-05-18 21:51:02] 2024-05-19 04:50:40,004 | INFO     | . initial setup = 2 s
[2024-05-18 21:51:02] 2024-05-19 04:50:40,004 | INFO     | . payload setup = 5 s
[2024-05-18 21:51:02] 2024-05-19 04:50:40,004 | INFO     | . stage-in = 0 s
[2024-05-18 21:51:02] 2024-05-19 04:50:40,004 | INFO     | . payload execution = 4203 s
[2024-05-18 21:51:02] 2024-05-19 04:50:40,004 | INFO     | . stage-out = 0 s
[2024-05-18 21:51:02] 2024-05-19 04:50:40,004 | INFO     | . log creation = 0 s
[2024-05-18 21:51:02] 2024-05-19 04:50:40,005 | INFO     | ..............................
[2024-05-18 21:51:02] 2024-05-19 04:50:40,051 | INFO     | 
[2024-05-18 21:51:02] 2024-05-19 04:50:40,052 | INFO     | job summary report
[2024-05-18 21:51:02] 2024-05-19 04:50:40,052 | INFO     | --------------------------------------------------
[2024-05-18 21:51:02] 2024-05-19 04:50:40,052 | INFO     | PanDA job id: 6208638769
[2024-05-18 21:51:02] 2024-05-19 04:50:40,052 | INFO     | task id: 38776104
[2024-05-18 21:51:02] 2024-05-19 04:50:40,052 | INFO     | errors: (none)
[2024-05-18 21:51:02] 2024-05-19 04:50:40,052 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 21:51:02] 2024-05-19 04:50:40,052 | INFO     | pilot state: finished 
[2024-05-18 21:51:02] 2024-05-19 04:50:40,052 | INFO     | transexitcode: 0
[2024-05-18 21:51:02] 2024-05-19 04:50:40,052 | INFO     | exeerrorcode: 0
[2024-05-18 21:51:02] 2024-05-19 04:50:40,052 | INFO     | exeerrordiag: 
[2024-05-18 21:51:02] 2024-05-19 04:50:40,052 | INFO     | exitcode: 0
[2024-05-18 21:51:02] 2024-05-19 04:50:40,052 | INFO     | exitmsg: OK
[2024-05-18 21:51:02] 2024-05-19 04:50:40,052 | INFO     | cpuconsumptiontime: 27077 s
[2024-05-18 21:51:02] 2024-05-19 04:50:40,052 | INFO     | nevents: 400
[2024-05-18 21:51:02] 2024-05-19 04:50:40,052 | INFO     | neventsw: 0
[2024-05-18 21:51:02] 2024-05-19 04:50:40,052 | INFO     | pid: 254076
[2024-05-18 21:51:02] 2024-05-19 04:50:40,052 | INFO     | pgrp: 254076
[2024-05-18 21:51:02] 2024-05-19 04:50:40,052 | INFO     | corecount: 12
[2024-05-18 21:51:02] 2024-05-19 04:50:40,052 | INFO     | event service: False
[2024-05-18 21:51:02] 2024-05-19 04:50:40,052 | INFO     | sizes: {0: 2392148, 5: 2392354, 11: 2392410, 4213: 2418403, 4214: 2427357, 4217: 2427413, 4221: 2427711}
[2024-05-18 21:51:02] 2024-05-19 04:50:40,052 | INFO     | --------------------------------------------------
[2024-05-18 21:51:02] 2024-05-19 04:50:40,052 | INFO     | 
[2024-05-18 21:51:02] 2024-05-19 04:50:40,053 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 21:51:02] 2024-05-19 04:50:40,076 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 21:51:02] 2024-05-19 04:50:40,077 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 21:51:02] 2024-05-19 04:50:40,077 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 21:51:02] 2024-05-19 04:50:40,077 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 21:51:02] 2024-05-19 04:50:40,077 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 21:51:02] 2024-05-19 04:50:40,077 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 21:51:02] 2024-05-19 04:50:40,077 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 21:51:02] 2024-05-19 04:50:40,077 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 21:51:02] 2024-05-19 04:50:40,077 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 21:51:02] 2024-05-19 04:50:40,077 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 21:51:02] 2024-05-19 04:50:40,077 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 21:51:02] 2024-05-19 04:50:40,077 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 21:51:02] 2024-05-19 04:50:40,077 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 21:51:02] 2024-05-19 04:50:40,077 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 21:51:02] 2024-05-19 04:50:40,077 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 21:51:02] 2024-05-19 04:50:40,077 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 21:51:02] 2024-05-19 04:50:40,077 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 21:51:02] 2024-05-19 04:50:40,077 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 21:51:02] 2024-05-19 04:50:40,077 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 21:51:02] 2024-05-19 04:50:40,077 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 21:51:02] 2024-05-19 04:50:40,077 | INFO     | job 6208638769 has completed (purged errors)
[2024-05-18 21:51:02] 2024-05-19 04:50:40,077 | INFO     | overall cleanup function is called
[2024-05-18 21:51:02] 2024-05-19 04:50:41,084 | INFO     | --- collectZombieJob: --- 10, [254076]
[2024-05-18 21:51:02] 2024-05-19 04:50:41,084 | INFO     | zombie collector waiting for pid 254076
[2024-05-18 21:51:02] 2024-05-19 04:50:41,084 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 21:51:02] 2024-05-19 04:50:42,089 | INFO     | collected zombie processes
[2024-05-18 21:51:02] 2024-05-19 04:50:42,090 | INFO     | will now attempt to kill all subprocesses of pid=254076
[2024-05-18 21:51:02] 2024-05-19 04:50:42,178 | INFO     | process IDs to be killed: [254076] (in reverse order)
[2024-05-18 21:51:02] 2024-05-19 04:50:42,268 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 21:51:02] 2024-05-19 04:50:42,269 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 21:51:02] 2024-05-19 04:50:42,273 | INFO     | did not find any defunct processes belonging to 254076
[2024-05-18 21:51:02] 2024-05-19 04:50:42,276 | INFO     | did not find any defunct processes belonging to 254076
[2024-05-18 21:51:02] 2024-05-19 04:50:42,276 | INFO     | ready for new job
[2024-05-18 21:51:02] 2024-05-19 04:50:42,277 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 21:51:02] 2024-05-19 04:50:42,277 | INFO     | *************************************
[2024-05-18 21:51:02] 2024-05-19 04:50:42,278 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 21:51:02] 2024-05-19 04:50:42,278 | INFO     | *************************************
[2024-05-18 21:51:02] 2024-05-19 04:50:42,278 | INFO     | 
[2024-05-18 21:51:02] 2024-05-19 04:50:42,279 | INFO     | architecture information:
[2024-05-18 21:51:02] 2024-05-19 04:50:42,279 | INFO     | executing command: cat /etc/os-release
[2024-05-18 21:51:02] 2024-05-19 04:50:42,323 | INFO     | cat /etc/os-release:
[2024-05-18 21:51:02] NAME="CentOS Linux"
[2024-05-18 21:51:02] VERSION="7 (Core)"
[2024-05-18 21:51:02] ID="centos"
[2024-05-18 21:51:02] ID_LIKE="rhel fedora"
[2024-05-18 21:51:02] VERSION_ID="7"
[2024-05-18 21:51:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 21:51:02] ANSI_COLOR="0;31"
[2024-05-18 21:51:02] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 21:51:02] HOME_URL="https://www.centos.org/"
[2024-05-18 21:51:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 21:51:02] 
[2024-05-18 21:51:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 21:51:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 21:51:02] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 21:51:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 21:51:02] 
[2024-05-18 21:51:02] 2024-05-19 04:50:42,323 | INFO     | *************************************
[2024-05-18 21:51:02] 2024-05-19 04:50:42,828 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 21:51:02] 2024-05-19 04:50:42,859 | INFO     | sufficient remaining disk space (2506948083712 B)
[2024-05-18 21:51:02] 2024-05-19 04:50:42,859 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 21:51:02] 2024-05-19 04:50:42,859 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 21:51:02] 2024-05-19 04:50:42,859 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 21:51:02] 2024-05-19 04:50:42,859 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-18 21:51:02] 2024-05-19 04:50:42,859 | INFO     | aborting loop
[2024-05-18 21:51:02] 2024-05-19 04:50:42,860 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 21:51:02] 2024-05-19 04:50:42,860 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 21:51:02] 2024-05-19 04:50:42,860 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 21:51:02] 2024-05-19 04:50:43,047 | INFO     | all job control threads have been joined
[2024-05-18 21:51:02] 2024-05-19 04:50:43,081 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 21:51:02] 2024-05-19 04:50:43,443 | INFO     | all data control threads have been joined
[2024-05-18 21:51:02] 2024-05-19 04:50:43,864 | INFO     | [job] retrieve thread has finished
[2024-05-18 21:51:02] 2024-05-19 04:50:43,864 | INFO     | [job] job monitor thread has finished
[2024-05-18 21:51:02] 2024-05-19 04:50:43,920 | INFO     | [payload] validate_post thread has finished
[2024-05-18 21:51:02] 2024-05-19 04:50:44,053 | INFO     | [job] control thread has finished
[2024-05-18 21:51:02] 2024-05-19 04:50:44,310 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 21:51:02] 2024-05-19 04:50:44,342 | INFO     | all payload control threads have been joined
[2024-05-18 21:51:02] 2024-05-19 04:50:44,449 | INFO     | [data] control thread has finished
[2024-05-18 21:51:02] 2024-05-19 04:50:44,641 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 21:51:02] 2024-05-19 04:50:44,664 | INFO     | [payload] failed_post thread has finished
[2024-05-18 21:51:02] 2024-05-19 04:50:44,966 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 21:51:02] 2024-05-19 04:50:44,966 | INFO     | [job] validate thread has finished
[2024-05-18 21:51:02] 2024-05-19 04:50:44,974 | INFO     | [data] copytool_in thread has finished
[2024-05-18 21:51:02] 2024-05-19 04:50:45,060 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 21:51:02] 2024-05-19 04:50:45,089 | INFO     | [data] copytool_out thread has finished
[2024-05-18 21:51:02] 2024-05-19 04:50:45,348 | INFO     | [payload] control thread has finished
[2024-05-18 21:51:02] 2024-05-19 04:50:45,979 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 21:51:02] 2024-05-19 04:50:46,066 | INFO     | [job] queue monitor thread has finished
[2024-05-18 21:51:02] 2024-05-19 04:50:49,984 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 21:51:02] 2024-05-19 04:50:53,435 | INFO     | job.realtimelogging is not enabled
[2024-05-18 21:51:02] 2024-05-19 04:50:54,440 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 21:51:02] 2024-05-19 04:50:56,025 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140328407684928)>', '<ExcThread(monitor, started 140327847454464)>']
[2024-05-18 21:51:02] 2024-05-19 04:50:56,928 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 21:51:02] 2024-05-19 04:50:56,928 | INFO     | [monitor] control thread has ended
[2024-05-18 21:51:02] 2024-05-19 04:51:01,050 | INFO     | all workflow threads have been joined
[2024-05-18 21:51:02] 2024-05-19 04:51:01,050 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 21:51:02] 2024-05-19 04:51:01,050 | INFO     | traces error code: 0
[2024-05-18 21:51:02] 2024-05-19 04:51:01,050 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 21:51:02] 2024-05-19 04:51:01,125 [wrapper] ==== pilot stdout END ====
[2024-05-18 21:51:02] 2024-05-19 04:51:01,130 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 21:51:02] 2024-05-19 04:51:01,135 [wrapper] pilotpid: 247401
[2024-05-18 21:51:02] 2024-05-19 04:51:01,140 [wrapper] Pilot exit status: 0
[2024-05-18 21:51:02] 2024-05-19 04:51:01,156 [wrapper] pandaids: 6208638769
[2024-05-18 21:51:02] 2024-05-19 04:51:01,199 [wrapper] cleanup: SIGTERM to supervisor_pilot  94177 247402
[2024-05-18 21:51:02] 2024-05-19 04:51:01,204 [wrapper] Test setup, not cleaning
[2024-05-18 21:51:02] 2024-05-19 04:51:01,211 [wrapper] ==== wrapper stdout END ====
[2024-05-18 21:51:02] 2024-05-19 04:51:01,216 [wrapper] ==== wrapper stderr END ====
[2024-05-18 21:51:02] 2024-05-19 04:51:01,226 [wrapper] apfmon messages muted
[2024-05-18 21:51:02]  *** Error codes and diagnostics ***
[2024-05-18 21:51:02]     "exeErrorCode": 0,
[2024-05-18 21:51:02]     "exeErrorDiag": "",
[2024-05-18 21:51:02]     "pilotErrorCode": 0,
[2024-05-18 21:51:02]     "pilotErrorDiag": "",
[2024-05-18 21:51:02]  *** Listing of results directory ***
[2024-05-18 21:51:02] total 823140
[2024-05-18 21:51:02] -rw-r--r-- 1 boinc boinc    467845 May 18 01:24 pilot3.tar.gz
[2024-05-18 21:51:02] -rwx------ 1 boinc boinc     32251 May 18 01:44 runpilot2-wrapper.sh
[2024-05-18 21:51:02] -rw-r--r-- 1 boinc boinc      5633 May 18 01:44 queuedata.json
[2024-05-18 21:51:02] -rw-r--r-- 1 boinc boinc       100 May 18 20:39 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 21:51:02] -rwxr-xr-x 1 boinc boinc      7986 May 18 20:39 run_atlas
[2024-05-18 21:51:02] -rw-r--r-- 1 boinc boinc       105 May 18 20:39 job.xml
[2024-05-18 21:51:02] -rw-r--r-- 1 boinc boinc      6652 May 18 20:39 init_data.xml
[2024-05-18 21:51:02] -rw-r--r-- 2 boinc boinc 599627554 May 18 20:39 EVNT.38776100._000545.pool.root.1
[2024-05-18 21:51:02] -rw-r--r-- 2 boinc boinc     17537 May 18 20:39 start_atlas.sh
[2024-05-18 21:51:02] drwxrwx--x 2 boinc boinc      4096 May 18 20:39 shared
[2024-05-18 21:51:02] -rw-r--r-- 2 boinc boinc    480002 May 18 20:39 input.tar.gz
[2024-05-18 21:51:02] -rw-r--r-- 1 boinc boinc         0 May 18 20:39 boinc_lockfile
[2024-05-18 21:51:02] -rw-r--r-- 1 boinc boinc      2641 May 18 20:39 pandaJob.out
[2024-05-18 21:51:02] -rw------- 1 boinc boinc       424 May 18 20:39 setup.sh.local
[2024-05-18 21:51:02] -rw------- 1 boinc boinc   1014003 May 18 20:40 agis_schedconf.cvmfs.json
[2024-05-18 21:51:02] -rw------- 1 boinc boinc         0 May 18 20:40 agis_ddmendpoints.agis.ALL.json
[2024-05-18 21:51:02] -rw------- 1 boinc boinc   1324701 May 18 20:40 cric_ddmendpoints.json
[2024-05-18 21:51:02] drwx------ 4 boinc boinc      4096 May 18 20:40 pilot3
[2024-05-18 21:51:02] -rw-r--r-- 1 boinc boinc       530 May 18 21:50 boinc_task_state.xml
[2024-05-18 21:51:02] -rw------- 1 boinc boinc 238258138 May 18 21:50 HITS.38776104._016795.pool.root.1
[2024-05-18 21:51:02] -rw------- 1 boinc boinc        95 May 18 21:50 pilot_heartbeat.json
[2024-05-18 21:51:02] -rw------- 1 boinc boinc      1061 May 18 21:50 memory_monitor_summary.json
[2024-05-18 21:51:02] -rw------- 1 boinc boinc    343027 May 18 21:50 log.38776104._016795.job.log.tgz.1
[2024-05-18 21:51:02] -rw------- 1 boinc boinc      7778 May 18 21:50 heartbeat.json
[2024-05-18 21:51:02] -rw------- 1 boinc boinc      4405 May 18 21:51 pilotlog.txt
[2024-05-18 21:51:02] -rw------- 1 boinc boinc    400022 May 18 21:51 log.38776104._016795.job.log.1
[2024-05-18 21:51:02] -rw------- 1 boinc boinc       357 May 18 21:51 output.list
[2024-05-18 21:51:02] -rw-r--r-- 1 boinc boinc       620 May 18 21:51 runtime_log
[2024-05-18 21:51:02] -rw------- 1 boinc boinc    757760 May 18 21:51 result.tar.gz
[2024-05-18 21:51:02] -rw-r--r-- 1 boinc boinc     11286 May 18 21:51 runtime_log.err
[2024-05-18 21:51:02] -rw------- 1 boinc boinc       657 May 18 21:51 GLeNDmVrUS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmmNSKDmDl7E1m.diag
[2024-05-18 21:51:02] -rw-r--r-- 1 boinc boinc        27 May 18 21:51 wrapper_checkpoint.txt
[2024-05-18 21:51:02] -rw-r--r-- 1 boinc boinc      8192 May 18 21:51 boinc_mmap_file
[2024-05-18 21:51:02] -rw-r--r-- 1 boinc boinc     21730 May 18 21:51 stderr.txt
[2024-05-18 21:51:02] HITS file was successfully produced:
[2024-05-18 21:51:02] -rw------- 1 boinc boinc 238258138 May 18 21:50 shared/HITS.pool.root.1
[2024-05-18 21:51:02]  *** Contents of shared directory: ***
[2024-05-18 21:51:02] total 819492
[2024-05-18 21:51:02] -rw-r--r-- 2 boinc boinc 599627554 May 18 20:39 ATLAS.root_0
[2024-05-18 21:51:02] -rw-r--r-- 2 boinc boinc     17537 May 18 20:39 start_atlas.sh
[2024-05-18 21:51:02] -rw-r--r-- 2 boinc boinc    480002 May 18 20:39 input.tar.gz
[2024-05-18 21:51:02] -rw------- 1 boinc boinc 238258138 May 18 21:50 HITS.pool.root.1
[2024-05-18 21:51:02] -rw------- 1 boinc boinc    757760 May 18 21:51 result.tar.gz
21:51:03 (243233): run_atlas exited; CPU time 26951.142085
21:51:03 (243233): called boinc_finish(0)

</stderr_txt>
]]>

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