Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:29:57 (292095): wrapper (7.7.26015): starting
09:29:57 (292095): wrapper: running run_atlas (--nthreads 8)
[2024-05-18 09:29:57] Arguments: --nthreads 8
[2024-05-18 09:29:57] Threads: 8
[2024-05-18 09:29:57] Checking for CVMFS
[2024-05-18 09:29:58] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 09:29:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 09:29:58] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 09:29:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 09:29:59] 2.11.2.0 159478 9416 88764 132880 0 290 16603868 18432001 13235 130560 0 45850792 98.841 103355809 40035 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.230.184:3128 1
[2024-05-18 09:29:59] CVMFS is ok
[2024-05-18 09:29:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 09:29:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 09:29:59] Further information can be found at the LHC@home message board.
[2024-05-18 09:29:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 09:29:59] Checking for apptainer binary...
[2024-05-18 09:29:59] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 09:29:59] Running /usr/bin/apptainer --version
[2024-05-18 09:29:59] apptainer version 1.3.0-1.el7
[2024-05-18 09:29:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 09:30:20] c6-4-5-2.aglt2.org
[2024-05-18 09:30:20] apptainer works
[2024-05-18 09:30:21] Set ATHENA_PROC_NUMBER=8
[2024-05-18 09:30:21] Set ATHENA_CORE_NUMBER=8
[2024-05-18 09:30:21] Starting ATLAS job with PandaID=6208607388
[2024-05-18 09:30:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 15:54:21]  *** The last 200 lines of the pilot log: ***
[2024-05-18 15:54:22] 2024-05-18 19:53:47,235 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 15:54:22] 2024-05-18 19:53:49,739 | INFO     | monitor loop #1521: job 0:6208607388 is in state 'finished'
[2024-05-18 15:54:22] 2024-05-18 19:53:49,740 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 15:54:22] 2024-05-18 19:53:52,246 | INFO     | monitor loop #1522: job 0:6208607388 is in state 'finished'
[2024-05-18 15:54:22] 2024-05-18 19:53:52,247 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 15:54:22] 2024-05-18 19:53:54,776 | INFO     | monitor loop #1523: job 0:6208607388 is in state 'finished'
[2024-05-18 15:54:22] 2024-05-18 19:53:54,777 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 15:54:22] 2024-05-18 19:53:57,281 | INFO     | monitor loop #1524: job 0:6208607388 is in state 'finished'
[2024-05-18 15:54:22] 2024-05-18 19:53:57,282 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 15:54:22] 2024-05-18 19:53:59,786 | INFO     | monitor loop #1525: job 0:6208607388 is in state 'finished'
[2024-05-18 15:54:22] 2024-05-18 19:53:59,787 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 15:54:22] 2024-05-18 19:54:02,291 | INFO     | monitor loop #1526: job 0:6208607388 is in state 'finished'
[2024-05-18 15:54:22] 2024-05-18 19:54:02,292 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 15:54:22] 2024-05-18 19:54:02,793 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-18 15:54:22] 2024-05-18 19:54:02,794 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6208607388/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 15:54:22] 2024-05-18 19:54:02,794 | INFO     | extracted standard info from prmon json
[2024-05-18 15:54:22] 2024-05-18 19:54:02,794 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 15:54:22] 2024-05-18 19:54:02,795 | WARNING  | GPU info not found in prmon json
[2024-05-18 15:54:22] 2024-05-18 19:54:02,795 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 15:54:22] 2024-05-18 19:54:02,795 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 15:54:22] 2024-05-18 19:54:02,801 | INFO     | fitting pss+swap vs Time
[2024-05-18 15:54:22] 2024-05-18 19:54:02,801 | INFO     | model: linear, x: [1716039403.0, 1716039464.0, 1716039525.0, 1716039586.0, 1716039647.0, 1716039708.0, 1716039769.0, 1716039830.0, 1716039891.0, 1716039952.0, 1716
[2024-05-18 15:54:22] 2024-05-18 19:54:02,802 | INFO     | sum of square deviations: 15834236576.447338
[2024-05-18 15:54:22] 2024-05-18 19:54:02,805 | INFO     | sum of deviations: 749440577156.8998
[2024-05-18 15:54:22] 2024-05-18 19:54:02,805 | INFO     | mean x: 1716050688.3504043
[2024-05-18 15:54:22] 2024-05-18 19:54:02,805 | INFO     | mean y: 2320653.331536388
[2024-05-18 15:54:22] 2024-05-18 19:54:02,805 | INFO     | -- intersect: -81219026021.55653
[2024-05-18 15:54:22] 2024-05-18 19:54:02,805 | INFO     | intersect: -81219026021.55653
[2024-05-18 15:54:22] 2024-05-18 19:54:02,805 | INFO     | chi2: 20.30641451089432
[2024-05-18 15:54:22] 2024-05-18 19:54:02,806 | INFO     | model: linear, x: [1716039403.0, 1716039464.0, 1716039525.0, 1716039586.0, 1716039647.0, 1716039708.0, 1716039769.0, 1716039830.0, 1716039891.0, 1716039952.0, 1716
[2024-05-18 15:54:22] 2024-05-18 19:54:02,806 | INFO     | sum of square deviations: 15202664383.325073
[2024-05-18 15:54:22] 2024-05-18 19:54:02,809 | INFO     | sum of deviations: 787906141617.7124
[2024-05-18 15:54:22] 2024-05-18 19:54:02,809 | INFO     | mean x: 1716050535.8551912
[2024-05-18 15:54:22] 2024-05-18 19:54:02,809 | INFO     | mean y: 2329841.598360656
[2024-05-18 15:54:22] 2024-05-18 19:54:02,810 | INFO     | -- intersect: -88935156538.07187
[2024-05-18 15:54:22] 2024-05-18 19:54:02,810 | INFO     | intersect: -88935156538.07187
[2024-05-18 15:54:22] 2024-05-18 19:54:02,810 | INFO     | chi2: 18.672392413539573
[2024-05-18 15:54:22] 2024-05-18 19:54:02,810 | INFO     | current chi2=18.672392413539573 (change=8.046827254895742 %)
[2024-05-18 15:54:22] 2024-05-18 19:54:02,810 | INFO     | right removable region: 365
[2024-05-18 15:54:22] 2024-05-18 19:54:02,811 | INFO     | model: linear, x: [1716039708.0, 1716039769.0, 1716039830.0, 1716039891.0, 1716039952.0, 1716040013.0, 1716040074.0, 1716040135.0, 1716040196.0, 1716040258.0, 1716
[2024-05-18 15:54:22] 2024-05-18 19:54:02,811 | INFO     | sum of square deviations: 15202585083.325073
[2024-05-18 15:54:22] 2024-05-18 19:54:02,814 | INFO     | sum of deviations: 628693371851.6797
[2024-05-18 15:54:22] 2024-05-18 19:54:02,814 | INFO     | mean x: 1716050840.8551912
[2024-05-18 15:54:22] 2024-05-18 19:54:02,814 | INFO     | mean y: 2349792.3524590163
[2024-05-18 15:54:22] 2024-05-18 19:54:02,814 | INFO     | -- intersect: -70963856513.54196
[2024-05-18 15:54:22] 2024-05-18 19:54:02,814 | INFO     | intersect: -70963856513.54196
[2024-05-18 15:54:22] 2024-05-18 19:54:02,815 | INFO     | chi2: 15.56837481860104
[2024-05-18 15:54:22] 2024-05-18 19:54:02,815 | INFO     | current chi2=15.56837481860104 (change=23.332724197821033 %)
[2024-05-18 15:54:22] 2024-05-18 19:54:02,815 | INFO     | left removable region: 10
[2024-05-18 15:54:22] 2024-05-18 19:54:02,815 | INFO     | model: linear, x: [1716040013.0, 1716040074.0, 1716040135.0, 1716040196.0, 1716040258.0, 1716040318.0, 1716040379.0, 1716040440.0, 1716040501.0, 1716040562.0, 1716
[2024-05-18 15:54:22] 2024-05-18 19:54:02,815 | INFO     | sum of square deviations: 13872642494.394299
[2024-05-18 15:54:22] 2024-05-18 19:54:02,818 | INFO     | sum of deviations: 570085369988.8447
[2024-05-18 15:54:22] 2024-05-18 19:54:02,818 | INFO     | mean x: 1716050810.366197
[2024-05-18 15:54:22] 2024-05-18 19:54:02,818 | INFO     | mean y: 2383595.870422535
[2024-05-18 15:54:22] 2024-05-18 19:54:02,818 | INFO     | -- intersect: -70517379422.789
[2024-05-18 15:54:22] 2024-05-18 19:54:02,818 | INFO     | intersect: -70517379422.789
[2024-05-18 15:54:22] 2024-05-18 19:54:02,819 | INFO     | chi2: 11.141645703076591
[2024-05-18 15:54:22] 2024-05-18 19:54:02,819 | INFO     | -- intersect: -70517379422.789
[2024-05-18 15:54:22] 2024-05-18 19:54:02,819 | INFO     | current memory leak: 41.09 B/s (using 355 data points, chi2=11.14)
[2024-05-18 15:54:22] 2024-05-18 19:54:02,820 | INFO     | ..............................
[2024-05-18 15:54:22] 2024-05-18 19:54:02,820 | INFO     | . Timing measurements:
[2024-05-18 15:54:22] 2024-05-18 19:54:02,820 | INFO     | . get job = 0 s
[2024-05-18 15:54:22] 2024-05-18 19:54:02,820 | INFO     | . initial setup = 4 s
[2024-05-18 15:54:22] 2024-05-18 19:54:02,820 | INFO     | . payload setup = 82 s
[2024-05-18 15:54:22] 2024-05-18 19:54:02,820 | INFO     | . stage-in = 0 s
[2024-05-18 15:54:22] 2024-05-18 19:54:02,820 | INFO     | . payload execution = 22646 s
[2024-05-18 15:54:22] 2024-05-18 19:54:02,820 | INFO     | . stage-out = 6 s
[2024-05-18 15:54:22] 2024-05-18 19:54:02,820 | INFO     | . log creation = 2 s
[2024-05-18 15:54:22] 2024-05-18 19:54:02,820 | INFO     | ..............................
[2024-05-18 15:54:22] 2024-05-18 19:54:02,944 | INFO     | 
[2024-05-18 15:54:22] 2024-05-18 19:54:02,944 | INFO     | job summary report
[2024-05-18 15:54:22] 2024-05-18 19:54:02,944 | INFO     | --------------------------------------------------
[2024-05-18 15:54:22] 2024-05-18 19:54:02,944 | INFO     | PanDA job id: 6208607388
[2024-05-18 15:54:22] 2024-05-18 19:54:02,944 | INFO     | task id: 38776104
[2024-05-18 15:54:22] 2024-05-18 19:54:02,944 | INFO     | errors: (none)
[2024-05-18 15:54:22] 2024-05-18 19:54:02,944 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 15:54:22] 2024-05-18 19:54:02,944 | INFO     | pilot state: finished 
[2024-05-18 15:54:22] 2024-05-18 19:54:02,945 | INFO     | transexitcode: 0
[2024-05-18 15:54:22] 2024-05-18 19:54:02,945 | INFO     | exeerrorcode: 0
[2024-05-18 15:54:22] 2024-05-18 19:54:02,945 | INFO     | exeerrordiag: 
[2024-05-18 15:54:22] 2024-05-18 19:54:02,945 | INFO     | exitcode: 0
[2024-05-18 15:54:22] 2024-05-18 19:54:02,945 | INFO     | exitmsg: OK
[2024-05-18 15:54:22] 2024-05-18 19:54:02,945 | INFO     | cpuconsumptiontime: 43157 s
[2024-05-18 15:54:22] 2024-05-18 19:54:02,945 | INFO     | nevents: 400
[2024-05-18 15:54:22] 2024-05-18 19:54:02,945 | INFO     | neventsw: 0
[2024-05-18 15:54:22] 2024-05-18 19:54:02,945 | INFO     | pid: 47774
[2024-05-18 15:54:22] 2024-05-18 19:54:02,945 | INFO     | pgrp: 47774
[2024-05-18 15:54:22] 2024-05-18 19:54:02,945 | INFO     | corecount: 8
[2024-05-18 15:54:22] 2024-05-18 19:54:02,945 | INFO     | event service: False
[2024-05-18 15:54:22] 2024-05-18 19:54:02,945 | INFO     | sizes: {0: 2390700, 1: 2392236, 12: 2392236, 23: 2392264, 34: 2392292, 45: 2392320, 50: 2392682, 55: 2392710, 22734: 2426922, 22741: 2435882, 22742: 2435938, 22793
[2024-05-18 15:54:22] 2024-05-18 19:54:02,945 | INFO     | --------------------------------------------------
[2024-05-18 15:54:22] 2024-05-18 19:54:02,945 | INFO     | 
[2024-05-18 15:54:22] 2024-05-18 19:54:02,946 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2024-05-18 15:54:22] 2024-05-18 19:54:03,379 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 15:54:22] 2024-05-18 19:54:03,380 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 15:54:22] 2024-05-18 19:54:03,380 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 15:54:22] 2024-05-18 19:54:03,380 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 15:54:22] 2024-05-18 19:54:03,380 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 15:54:22] 2024-05-18 19:54:03,380 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 15:54:22] 2024-05-18 19:54:03,380 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 15:54:22] 2024-05-18 19:54:03,380 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 15:54:22] 2024-05-18 19:54:03,380 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 15:54:22] 2024-05-18 19:54:03,380 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 15:54:22] 2024-05-18 19:54:03,380 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 15:54:22] 2024-05-18 19:54:03,380 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 15:54:22] 2024-05-18 19:54:03,381 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 15:54:22] 2024-05-18 19:54:03,381 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 15:54:22] 2024-05-18 19:54:03,381 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 15:54:22] 2024-05-18 19:54:03,381 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 15:54:22] 2024-05-18 19:54:03,381 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 15:54:22] 2024-05-18 19:54:03,381 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 15:54:22] 2024-05-18 19:54:03,381 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 15:54:22] 2024-05-18 19:54:03,381 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 15:54:22] 2024-05-18 19:54:03,381 | INFO     | job 6208607388 has completed (purged errors)
[2024-05-18 15:54:22] 2024-05-18 19:54:03,381 | INFO     | overall cleanup function is called
[2024-05-18 15:54:22] 2024-05-18 19:54:04,418 | INFO     | --- collectZombieJob: --- 10, [47774]
[2024-05-18 15:54:22] 2024-05-18 19:54:04,419 | INFO     | zombie collector waiting for pid 47774
[2024-05-18 15:54:22] 2024-05-18 19:54:04,419 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 15:54:22] 2024-05-18 19:54:05,424 | INFO     | collected zombie processes
[2024-05-18 15:54:22] 2024-05-18 19:54:05,424 | INFO     | will now attempt to kill all subprocesses of pid=47774
[2024-05-18 15:54:22] 2024-05-18 19:54:06,077 | INFO     | process IDs to be killed: [47774] (in reverse order)
[2024-05-18 15:54:22] 2024-05-18 19:54:07,321 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 15:54:22] 2024-05-18 19:54:07,321 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 15:54:22] 2024-05-18 19:54:07,334 | INFO     | did not find any defunct processes belonging to 47774
[2024-05-18 15:54:22] 2024-05-18 19:54:07,353 | INFO     | did not find any defunct processes belonging to 47774
[2024-05-18 15:54:22] 2024-05-18 19:54:07,353 | INFO     | ready for new job
[2024-05-18 15:54:22] 2024-05-18 19:54:07,353 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 15:54:22] 2024-05-18 19:54:07,359 | INFO     | *************************************
[2024-05-18 15:54:22] 2024-05-18 19:54:07,359 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 15:54:22] 2024-05-18 19:54:07,359 | INFO     | *************************************
[2024-05-18 15:54:22] 2024-05-18 19:54:07,359 | INFO     | 
[2024-05-18 15:54:22] 2024-05-18 19:54:07,366 | INFO     | architecture information:
[2024-05-18 15:54:22] 2024-05-18 19:54:07,370 | INFO     | executing command: cat /etc/os-release
[2024-05-18 15:54:22] 2024-05-18 19:54:07,522 | INFO     | cat /etc/os-release:
[2024-05-18 15:54:22] NAME="CentOS Linux"
[2024-05-18 15:54:22] VERSION="7 (Core)"
[2024-05-18 15:54:22] ID="centos"
[2024-05-18 15:54:22] ID_LIKE="rhel fedora"
[2024-05-18 15:54:22] VERSION_ID="7"
[2024-05-18 15:54:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 15:54:22] ANSI_COLOR="0;31"
[2024-05-18 15:54:22] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 15:54:22] HOME_URL="https://www.centos.org/"
[2024-05-18 15:54:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 15:54:22] 
[2024-05-18 15:54:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 15:54:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 15:54:22] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 15:54:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 15:54:22] 
[2024-05-18 15:54:22] 2024-05-18 19:54:07,522 | INFO     | *************************************
[2024-05-18 15:54:22] 2024-05-18 19:54:08,025 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2024-05-18 15:54:22] 2024-05-18 19:54:08,196 | INFO     | sufficient remaining disk space (102046367744 B)
[2024-05-18 15:54:22] 2024-05-18 19:54:08,197 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 15:54:22] 2024-05-18 19:54:08,197 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 15:54:22] 2024-05-18 19:54:08,197 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-18 15:54:22] 2024-05-18 19:54:08,197 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 15:54:22] 2024-05-18 19:54:08,197 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 15:54:22] 2024-05-18 19:54:08,197 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 15:54:22] 2024-05-18 19:54:08,197 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 15:54:22] 2024-05-18 19:54:08,312 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 15:54:22] 2024-05-18 19:54:08,313 | INFO     | aborting loop
[2024-05-18 15:54:22] 2024-05-18 19:54:08,481 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 15:54:22] 2024-05-18 19:54:08,604 | INFO     | all data control threads have been joined
[2024-05-18 15:54:22] 2024-05-18 19:54:09,204 | INFO     | [job] retrieve thread has finished
[2024-05-18 15:54:22] 2024-05-18 19:54:09,208 | INFO     | [job] queue monitor thread has finished
[2024-05-18 15:54:22] 2024-05-18 19:54:09,334 | INFO     | [job] job monitor thread has finished
[2024-05-18 15:54:22] 2024-05-18 19:54:09,403 | INFO     | all job control threads have been joined
[2024-05-18 15:54:22] 2024-05-18 19:54:09,425 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 15:54:22] 2024-05-18 19:54:09,572 | INFO     | all payload control threads have been joined
[2024-05-18 15:54:22] 2024-05-18 19:54:09,610 | INFO     | [data] control thread has finished
[2024-05-18 15:54:22] 2024-05-18 19:54:09,694 | INFO     | [payload] validate_post thread has finished
[2024-05-18 15:54:22] 2024-05-18 19:54:09,880 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 15:54:22] 2024-05-18 19:54:09,927 | INFO     | [payload] failed_post thread has finished
[2024-05-18 15:54:22] 2024-05-18 19:54:10,371 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 15:54:22] 2024-05-18 19:54:10,409 | INFO     | [job] control thread has finished
[2024-05-18 15:54:22] 2024-05-18 19:54:10,483 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 15:54:22] 2024-05-18 19:54:10,488 | INFO     | [job] validate thread has finished
[2024-05-18 15:54:22] 2024-05-18 19:54:10,521 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 15:54:22] 2024-05-18 19:54:10,567 | INFO     | [data] copytool_in thread has finished
[2024-05-18 15:54:22] 2024-05-18 19:54:10,578 | INFO     | [payload] control thread has finished
[2024-05-18 15:54:22] 2024-05-18 19:54:11,432 | INFO     | [data] copytool_out thread has finished
[2024-05-18 15:54:22] 2024-05-18 19:54:12,495 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 15:54:22] 2024-05-18 19:54:13,809 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140241098860352)>', '<ExcThread(monitor, started 140240530429696)>']
[2024-05-18 15:54:22] 2024-05-18 19:54:14,240 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 15:54:22] 2024-05-18 19:54:14,241 | INFO     | [monitor] control thread has ended
[2024-05-18 15:54:22] 2024-05-18 19:54:18,836 | INFO     | all workflow threads have been joined
[2024-05-18 15:54:22] 2024-05-18 19:54:18,837 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 15:54:22] 2024-05-18 19:54:18,837 | INFO     | traces error code: 0
[2024-05-18 15:54:22] 2024-05-18 19:54:18,837 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 15:54:22] 2024-05-18 19:54:19,823 [wrapper] ==== pilot stdout END ====
[2024-05-18 15:54:22] 2024-05-18 19:54:19,856 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 15:54:22] 2024-05-18 19:54:19,898 [wrapper] pilotpid: 16636
[2024-05-18 15:54:22] 2024-05-18 19:54:19,932 [wrapper] Pilot exit status: 0
[2024-05-18 15:54:22] 2024-05-18 19:54:20,080 [wrapper] pandaids: 6208607388
[2024-05-18 15:54:22] 2024-05-18 19:54:20,479 [wrapper] cleanup: SIGTERM to supervisor_pilot 292500 16637
[2024-05-18 15:54:22] 2024-05-18 19:54:20,524 [wrapper] Test setup, not cleaning
[2024-05-18 15:54:22] 2024-05-18 19:54:20,564 [wrapper] ==== wrapper stdout END ====
[2024-05-18 15:54:22] 2024-05-18 19:54:20,608 [wrapper] ==== wrapper stderr END ====
[2024-05-18 15:54:22] 2024-05-18 19:54:20,701 [wrapper] apfmon messages muted
[2024-05-18 15:54:22]  *** Error codes and diagnostics ***
[2024-05-18 15:54:22]     "exeErrorCode": 0,
[2024-05-18 15:54:22]     "exeErrorDiag": "",
[2024-05-18 15:54:22]     "pilotErrorCode": 0,
[2024-05-18 15:54:22]     "pilotErrorDiag": "",
[2024-05-18 15:54:22]  *** Listing of results directory ***
[2024-05-18 15:54:22] total 822316
[2024-05-18 15:54:22] -rw-r--r-- 1 boincer umatlas    467845 May 18 03:59 pilot3.tar.gz
[2024-05-18 15:54:22] -rw-r--r-- 1 boincer umatlas      5633 May 18 04:16 queuedata.json
[2024-05-18 15:54:22] -rwx------ 1 boincer umatlas     32251 May 18 04:16 runpilot2-wrapper.sh
[2024-05-18 15:54:22] -rw-r--r-- 1 boincer umatlas       100 May 18 09:29 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 15:54:22] -rwxr-xr-x 1 boincer umatlas      7986 May 18 09:29 run_atlas
[2024-05-18 15:54:22] -rw-r--r-- 1 boincer umatlas       105 May 18 09:29 job.xml
[2024-05-18 15:54:22] -rw-r--r-- 2 boincer umatlas 602074374 May 18 09:29 EVNT.38776100._000541.pool.root.1
[2024-05-18 15:54:22] -rw-r--r-- 2 boincer umatlas     17537 May 18 09:29 start_atlas.sh
[2024-05-18 15:54:22] drwxrwx--x 2 boincer umatlas      4096 May 18 09:29 shared
[2024-05-18 15:54:22] -rw-r--r-- 2 boincer umatlas    480008 May 18 09:29 input.tar.gz
[2024-05-18 15:54:22] -rw-r--r-- 1 boincer umatlas         0 May 18 09:29 boinc_lockfile
[2024-05-18 15:54:22] -rw-r--r-- 1 boincer umatlas      2645 May 18 09:30 pandaJob.out
[2024-05-18 15:54:22] -rw------- 1 boincer umatlas       467 May 18 09:30 setup.sh.local
[2024-05-18 15:54:22] -rw------- 1 boincer umatlas   1019434 May 18 09:32 agis_schedconf.cvmfs.json
[2024-05-18 15:54:22] -rw------- 1 boincer umatlas   1324701 May 18 09:32 cric_ddmendpoints.json
[2024-05-18 15:54:22] drwx------ 4 boincer umatlas      4096 May 18 09:32 pilot3
[2024-05-18 15:54:22] -rw------- 1 boincer umatlas 231218670 May 18 15:50 HITS.38776104._016665.pool.root.1
[2024-05-18 15:54:22] -rw-r--r-- 1 boincer umatlas       532 May 18 15:51 boinc_task_state.xml
[2024-05-18 15:54:22] -rw------- 1 boincer umatlas      1068 May 18 15:52 memory_monitor_summary.json
[2024-05-18 15:54:22] -rw------- 1 boincer umatlas         0 May 18 15:53 agis_ddmendpoints.agis.ALL.json
[2024-05-18 15:54:22] -rw------- 1 boincer umatlas    492109 May 18 15:53 log.38776104._016665.job.log.tgz.1
[2024-05-18 15:54:22] -rw------- 1 boincer umatlas        95 May 18 15:53 pilot_heartbeat.json
[2024-05-18 15:54:22] -rw------- 1 boincer umatlas      7791 May 18 15:54 heartbeat.json
[2024-05-18 15:54:22] -rw-r--r-- 1 boincer umatlas      6383 May 18 15:54 init_data.xml
[2024-05-18 15:54:22] -rw------- 1 boincer umatlas      4335 May 18 15:54 pilotlog.txt
[2024-05-18 15:54:22] -rw------- 1 boincer umatlas   2118929 May 18 15:54 log.38776104._016665.job.log.1
[2024-05-18 15:54:22] -rw-r--r-- 1 boincer umatlas      8192 May 18 15:54 boinc_mmap_file
[2024-05-18 15:54:22] -rw------- 1 boincer umatlas       357 May 18 15:54 output.list
[2024-05-18 15:54:22] -rw-r--r-- 1 boincer umatlas       620 May 18 15:54 runtime_log
[2024-05-18 15:54:22] -rw------- 1 boincer umatlas   2631680 May 18 15:54 result.tar.gz
[2024-05-18 15:54:22] -rw------- 1 boincer umatlas       650 May 18 15:54 XzPODmLQUS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmnLSKDmnICfzm.diag
[2024-05-18 15:54:22] -rw-r--r-- 1 boincer umatlas     11405 May 18 15:54 runtime_log.err
[2024-05-18 15:54:22] -rw-r--r-- 1 boincer umatlas        28 May 18 15:54 wrapper_checkpoint.txt
[2024-05-18 15:54:22] -rw-r--r-- 1 boincer umatlas     21945 May 18 15:54 stderr.txt
[2024-05-18 15:54:22] HITS file was successfully produced:
[2024-05-18 15:54:22] -rw------- 1 boincer umatlas 231218670 May 18 15:50 shared/HITS.pool.root.1
[2024-05-18 15:54:22]  *** Contents of shared directory: ***
[2024-05-18 15:54:22] total 816836
[2024-05-18 15:54:22] -rw-r--r-- 2 boincer umatlas 602074374 May 18 09:29 ATLAS.root_0
[2024-05-18 15:54:22] -rw-r--r-- 2 boincer umatlas     17537 May 18 09:29 start_atlas.sh
[2024-05-18 15:54:22] -rw-r--r-- 2 boincer umatlas    480008 May 18 09:29 input.tar.gz
[2024-05-18 15:54:22] -rw------- 1 boincer umatlas 231218670 May 18 15:50 HITS.pool.root.1
[2024-05-18 15:54:22] -rw------- 1 boincer umatlas   2631680 May 18 15:54 result.tar.gz
15:54:24 (292095): run_atlas exited; CPU time 42851.346519
15:54:24 (292095): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN