Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
17:49:02 (10149): wrapper (7.7.26015): starting
17:49:02 (10149): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 17:49:02] Arguments: --nthreads 12
[2024-05-18 17:49:02] Threads: 12
[2024-05-18 17:49:02] Checking for CVMFS
[2024-05-18 17:49:02] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 17:49:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 17:49:02] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 17:49:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 17:49:03] 2.9.2.0 9154 185659 135340 132895 2 180 43739031 45568000 16925 130560 0 1187656222 99.802 667452940 3760 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-05-18 17:49:03] CVMFS is ok
[2024-05-18 17:49:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 17:49:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 17:49:03] Further information can be found at the LHC@home message board.
[2024-05-18 17:49:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 17:49:03] Checking for apptainer binary...
[2024-05-18 17:49:03] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 17:49:03] Running /usr/bin/apptainer --version
[2024-05-18 17:49:03] apptainer version 1.1.8-1.el7
[2024-05-18 17:49:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 17:49:04] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0053.triumf.lcg
[2024-05-18 17:49:04] apptainer works
[2024-05-18 17:49:05] Set ATHENA_PROC_NUMBER=12
[2024-05-18 17:49:05] Set ATHENA_CORE_NUMBER=12
[2024-05-18 17:49:05] Starting ATLAS job with PandaID=6208568445
[2024-05-18 17:49:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 20:12:02]  *** The last 200 lines of the pilot log: ***
[2024-05-18 20:12:02] 2024-05-19 03:11:46,734 | INFO     | -- intersect: -69820251391.53722
[2024-05-18 20:12:02] 2024-05-19 03:11:46,734 | INFO     | intersect: -69820251391.53722
[2024-05-18 20:12:02] 2024-05-19 03:11:46,734 | INFO     | chi2: 0.3488480351564131
[2024-05-18 20:12:02] 2024-05-19 03:11:46,734 | INFO     | current chi2=0.3488480351564131 (change=78.62517312689918 %)
[2024-05-18 20:12:02] 2024-05-19 03:11:46,734 | INFO     | model: linear, x: [1716081294.0, 1716081357.0, 1716081419.0, 1716081477.0, 1716081541.0, 1716081600.0, 1716081660.0, 1716081721.0, 1716081782.0, 1716081843.0, 1716
[2024-05-18 20:12:02] 2024-05-19 03:11:46,734 | INFO     | sum of square deviations: 471420328.5739122
[2024-05-18 20:12:02] 2024-05-19 03:11:46,734 | INFO     | sum of deviations: 9551533013.84348
[2024-05-18 20:12:02] 2024-05-19 03:11:46,734 | INFO     | mean x: 1716084771.4608696
[2024-05-18 20:12:02] 2024-05-19 03:11:46,734 | INFO     | mean y: 2723621.9652173915
[2024-05-18 20:12:02] 2024-05-19 03:11:46,734 | INFO     | -- intersect: -34767182034.72862
[2024-05-18 20:12:02] 2024-05-19 03:11:46,734 | INFO     | intersect: -34767182034.72862
[2024-05-18 20:12:02] 2024-05-19 03:11:46,735 | INFO     | chi2: 0.017639760472239627
[2024-05-18 20:12:02] 2024-05-19 03:11:46,735 | INFO     | current chi2=0.017639760472239627 (change=94.94342559093661 %)
[2024-05-18 20:12:02] 2024-05-19 03:11:46,735 | INFO     | model: linear, x: [1716081600.0, 1716081660.0, 1716081721.0, 1716081782.0, 1716081843.0, 1716081904.0, 1716081965.0, 1716082026.0, 1716082087.0, 1716082149.0, 1716
[2024-05-18 20:12:02] 2024-05-19 03:11:46,735 | INFO     | sum of square deviations: 412584257.09090906
[2024-05-18 20:12:02] 2024-05-19 03:11:46,735 | INFO     | sum of deviations: 6243523027.909092
[2024-05-18 20:12:02] 2024-05-19 03:11:46,735 | INFO     | mean x: 1716084923.909091
[2024-05-18 20:12:02] 2024-05-19 03:11:46,735 | INFO     | mean y: 2732115.090909091
[2024-05-18 20:12:02] 2024-05-19 03:11:46,735 | INFO     | -- intersect: -25966304648.018574
[2024-05-18 20:12:02] 2024-05-19 03:11:46,735 | INFO     | intersect: -25966304648.018574
[2024-05-18 20:12:02] 2024-05-19 03:11:46,735 | INFO     | chi2: 0.001571181643646606
[2024-05-18 20:12:02] 2024-05-19 03:11:46,735 | INFO     | current chi2=0.001571181643646606 (change=91.0929536366481 %)
[2024-05-18 20:12:02] 2024-05-19 03:11:46,736 | INFO     | model: linear, x: [1716081904.0, 1716081965.0, 1716082026.0, 1716082087.0, 1716082149.0, 1716082210.0, 1716082271.0, 1716082331.0, 1716082394.0, 1716082454.0, 1716
[2024-05-18 20:12:02] 2024-05-19 03:11:46,736 | INFO     | sum of square deviations: 358818337.5619048
[2024-05-18 20:12:02] 2024-05-19 03:11:46,736 | INFO     | sum of deviations: 4990013622.809523
[2024-05-18 20:12:02] 2024-05-19 03:11:46,736 | INFO     | mean x: 1716085076.4190476
[2024-05-18 20:12:02] 2024-05-19 03:11:46,736 | INFO     | mean y: 2735664.095238095
[2024-05-18 20:12:02] 2024-05-19 03:11:46,736 | INFO     | -- intersect: -23862510374.93641
[2024-05-18 20:12:02] 2024-05-19 03:11:46,736 | INFO     | intersect: -23862510374.93641
[2024-05-18 20:12:02] 2024-05-19 03:11:46,736 | INFO     | chi2: 0.000981462505296583
[2024-05-18 20:12:02] 2024-05-19 03:11:46,736 | INFO     | current chi2=0.000981462505296583 (change=37.53347938697431 %)
[2024-05-18 20:12:02] 2024-05-19 03:11:46,736 | INFO     | model: linear, x: [1716082210.0, 1716082271.0, 1716082331.0, 1716082394.0, 1716082454.0, 1716082517.0, 1716082576.0, 1716082636.0, 1716082697.0, 1716082759.0, 1716
[2024-05-18 20:12:02] 2024-05-19 03:11:46,736 | INFO     | sum of square deviations: 309935742.50999916
[2024-05-18 20:12:02] 2024-05-19 03:11:46,737 | INFO     | sum of deviations: 4018080094.130002
[2024-05-18 20:12:02] 2024-05-19 03:11:46,737 | INFO     | mean x: 1716085228.93
[2024-05-18 20:12:02] 2024-05-19 03:11:46,737 | INFO     | mean y: 2738689.59
[2024-05-18 20:12:02] 2024-05-19 03:11:46,737 | INFO     | -- intersect: -22244995122.432995
[2024-05-18 20:12:02] 2024-05-19 03:11:46,737 | INFO     | intersect: -22244995122.432995
[2024-05-18 20:12:02] 2024-05-19 03:11:46,737 | INFO     | chi2: 0.0006842255298989753
[2024-05-18 20:12:02] 2024-05-19 03:11:46,737 | INFO     | current chi2=0.0006842255298989753 (change=30.28510756076079 %)
[2024-05-18 20:12:02] 2024-05-19 03:11:46,737 | INFO     | model: linear, x: [1716082517.0, 1716082576.0, 1716082636.0, 1716082697.0, 1716082759.0, 1716082821.0, 1716082884.0, 1716082941.0, 1716083002.0, 1716083063.0, 1716
[2024-05-18 20:12:02] 2024-05-19 03:11:46,737 | INFO     | sum of square deviations: 265728916.8000001
[2024-05-18 20:12:02] 2024-05-19 03:11:46,737 | INFO     | sum of deviations: 3237605824.5999994
[2024-05-18 20:12:02] 2024-05-19 03:11:46,738 | INFO     | mean x: 1716085381.4
[2024-05-18 20:12:02] 2024-05-19 03:11:46,738 | INFO     | mean y: 2741380.905263158
[2024-05-18 20:12:02] 2024-05-19 03:11:46,738 | INFO     | -- intersect: -20905814952.515015
[2024-05-18 20:12:02] 2024-05-19 03:11:46,738 | INFO     | intersect: -20905814952.515015
[2024-05-18 20:12:02] 2024-05-19 03:11:46,738 | INFO     | chi2: 0.000530711295357647
[2024-05-18 20:12:02] 2024-05-19 03:11:46,738 | INFO     | current chi2=0.000530711295357647 (change=22.436203829458748 %)
[2024-05-18 20:12:02] 2024-05-19 03:11:46,738 | INFO     | left removable region: 80
[2024-05-18 20:12:02] 2024-05-19 03:11:46,738 | INFO     | model: linear, x: [1716084954.0, 1716085015.0, 1716085077.0, 1716085139.0, 1716085198.0, 1716085259.0, 1716085320.0, 1716085381.0, 1716085444.0, 1716085503.0, 1716
[2024-05-18 20:12:02] 2024-05-19 03:11:46,738 | INFO     | sum of square deviations: 36457149.95918372
[2024-05-18 20:12:02] 2024-05-19 03:11:46,738 | INFO     | sum of deviations: 297897393.3265306
[2024-05-18 20:12:02] 2024-05-19 03:11:46,738 | INFO     | mean x: 1716086418.2040815
[2024-05-18 20:12:02] 2024-05-19 03:11:46,738 | INFO     | mean y: 2754314.3673469387
[2024-05-18 20:12:02] 2024-05-19 03:11:46,738 | INFO     | -- intersect: -14019671225.709194
[2024-05-18 20:12:02] 2024-05-19 03:11:46,738 | INFO     | intersect: -14019671225.709194
[2024-05-18 20:12:02] 2024-05-19 03:11:46,738 | INFO     | chi2: 0.00011765640000285515
[2024-05-18 20:12:02] 2024-05-19 03:11:46,738 | INFO     | -- intersect: -14019671225.709194
[2024-05-18 20:12:02] 2024-05-19 03:11:46,739 | INFO     | current memory leak: 8.17 B/s (using 49 data points, chi2=0.00)
[2024-05-18 20:12:02] 2024-05-19 03:11:46,739 | INFO     | ..............................
[2024-05-18 20:12:02] 2024-05-19 03:11:46,739 | INFO     | . Timing measurements:
[2024-05-18 20:12:02] 2024-05-19 03:11:46,739 | INFO     | . get job = 0 s
[2024-05-18 20:12:02] 2024-05-19 03:11:46,739 | INFO     | . initial setup = 6 s
[2024-05-18 20:12:02] 2024-05-19 03:11:46,739 | INFO     | . payload setup = 61 s
[2024-05-18 20:12:02] 2024-05-19 03:11:46,739 | INFO     | . stage-in = 0 s
[2024-05-18 20:12:02] 2024-05-19 03:11:46,739 | INFO     | . payload execution = 8296 s
[2024-05-18 20:12:02] 2024-05-19 03:11:46,739 | INFO     | . stage-out = 1 s
[2024-05-18 20:12:02] 2024-05-19 03:11:46,739 | INFO     | . log creation = 0 s
[2024-05-18 20:12:02] 2024-05-19 03:11:46,739 | INFO     | ..............................
[2024-05-18 20:12:02] 2024-05-19 03:11:46,792 | INFO     | 
[2024-05-18 20:12:02] 2024-05-19 03:11:46,792 | INFO     | job summary report
[2024-05-18 20:12:02] 2024-05-19 03:11:46,792 | INFO     | --------------------------------------------------
[2024-05-18 20:12:02] 2024-05-19 03:11:46,792 | INFO     | PanDA job id: 6208568445
[2024-05-18 20:12:02] 2024-05-19 03:11:46,792 | INFO     | task id: 38776125
[2024-05-18 20:12:02] 2024-05-19 03:11:46,793 | INFO     | errors: (none)
[2024-05-18 20:12:02] 2024-05-19 03:11:46,793 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 20:12:02] 2024-05-19 03:11:46,793 | INFO     | pilot state: finished 
[2024-05-18 20:12:02] 2024-05-19 03:11:46,793 | INFO     | transexitcode: 0
[2024-05-18 20:12:02] 2024-05-19 03:11:46,793 | INFO     | exeerrorcode: 0
[2024-05-18 20:12:02] 2024-05-19 03:11:46,793 | INFO     | exeerrordiag: 
[2024-05-18 20:12:02] 2024-05-19 03:11:46,793 | INFO     | exitcode: 0
[2024-05-18 20:12:02] 2024-05-19 03:11:46,793 | INFO     | exitmsg: OK
[2024-05-18 20:12:02] 2024-05-19 03:11:46,793 | INFO     | cpuconsumptiontime: 33723 s
[2024-05-18 20:12:02] 2024-05-19 03:11:46,793 | INFO     | nevents: 400
[2024-05-18 20:12:02] 2024-05-19 03:11:46,793 | INFO     | neventsw: 0
[2024-05-18 20:12:02] 2024-05-19 03:11:46,793 | INFO     | pid: 56569
[2024-05-18 20:12:02] 2024-05-19 03:11:46,793 | INFO     | pgrp: 56569
[2024-05-18 20:12:02] 2024-05-19 03:11:46,793 | INFO     | corecount: 12
[2024-05-18 20:12:02] 2024-05-19 03:11:46,793 | INFO     | event service: False
[2024-05-18 20:12:02] 2024-05-19 03:11:46,793 | INFO     | sizes: {0: 2390690, 2: 2391288, 3: 2392251, 14: 2392251, 25: 2392279, 36: 2392307, 45: 2392669, 47: 2392697, 8361: 2419696, 8364: 2428650, 8365: 2428706, 8375: 242
[2024-05-18 20:12:02] 2024-05-19 03:11:46,794 | INFO     | --------------------------------------------------
[2024-05-18 20:12:02] 2024-05-19 03:11:46,794 | INFO     | 
[2024-05-18 20:12:02] 2024-05-19 03:11:46,794 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 20:12:02] 2024-05-19 03:11:46,834 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 20:12:02] 2024-05-19 03:11:46,835 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 20:12:02] 2024-05-19 03:11:46,835 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 20:12:02] 2024-05-19 03:11:46,835 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 20:12:02] 2024-05-19 03:11:46,835 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 20:12:02] 2024-05-19 03:11:46,835 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 20:12:02] 2024-05-19 03:11:46,835 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 20:12:02] 2024-05-19 03:11:46,835 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 20:12:02] 2024-05-19 03:11:46,835 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 20:12:02] 2024-05-19 03:11:46,835 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 20:12:02] 2024-05-19 03:11:46,836 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 20:12:02] 2024-05-19 03:11:46,836 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 20:12:02] 2024-05-19 03:11:46,836 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 20:12:02] 2024-05-19 03:11:46,836 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 20:12:02] 2024-05-19 03:11:46,836 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 20:12:02] 2024-05-19 03:11:46,836 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 20:12:02] 2024-05-19 03:11:46,836 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 20:12:02] 2024-05-19 03:11:46,836 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 20:12:02] 2024-05-19 03:11:46,836 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 20:12:02] 2024-05-19 03:11:46,836 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 20:12:02] 2024-05-19 03:11:46,836 | INFO     | job 6208568445 has completed (purged errors)
[2024-05-18 20:12:02] 2024-05-19 03:11:46,836 | INFO     | overall cleanup function is called
[2024-05-18 20:12:02] 2024-05-19 03:11:47,845 | INFO     | --- collectZombieJob: --- 10, [56569]
[2024-05-18 20:12:02] 2024-05-19 03:11:47,847 | INFO     | zombie collector waiting for pid 56569
[2024-05-18 20:12:02] 2024-05-19 03:11:47,847 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 20:12:02] 2024-05-19 03:11:48,852 | INFO     | collected zombie processes
[2024-05-18 20:12:02] 2024-05-19 03:11:48,853 | INFO     | will now attempt to kill all subprocesses of pid=56569
[2024-05-18 20:12:02] 2024-05-19 03:11:49,383 | INFO     | process IDs to be killed: [56569] (in reverse order)
[2024-05-18 20:12:02] 2024-05-19 03:11:49,539 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 20:12:02] 2024-05-19 03:11:49,540 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 20:12:02] 2024-05-19 03:11:49,552 | INFO     | did not find any defunct processes belonging to 56569
[2024-05-18 20:12:02] 2024-05-19 03:11:49,563 | INFO     | did not find any defunct processes belonging to 56569
[2024-05-18 20:12:02] 2024-05-19 03:11:49,563 | INFO     | ready for new job
[2024-05-18 20:12:02] 2024-05-19 03:11:49,563 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 20:12:02] 2024-05-19 03:11:49,565 | INFO     | *************************************
[2024-05-18 20:12:02] 2024-05-19 03:11:49,565 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 20:12:02] 2024-05-19 03:11:49,565 | INFO     | *************************************
[2024-05-18 20:12:02] 2024-05-19 03:11:49,565 | INFO     | 
[2024-05-18 20:12:02] 2024-05-19 03:11:49,569 | INFO     | architecture information:
[2024-05-18 20:12:02] 2024-05-19 03:11:49,569 | INFO     | executing command: cat /etc/os-release
[2024-05-18 20:12:02] 2024-05-19 03:11:49,597 | INFO     | cat /etc/os-release:
[2024-05-18 20:12:02] NAME="CentOS Linux"
[2024-05-18 20:12:02] VERSION="7 (Core)"
[2024-05-18 20:12:02] ID="centos"
[2024-05-18 20:12:02] ID_LIKE="rhel fedora"
[2024-05-18 20:12:02] VERSION_ID="7"
[2024-05-18 20:12:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 20:12:02] ANSI_COLOR="0;31"
[2024-05-18 20:12:02] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 20:12:02] HOME_URL="https://www.centos.org/"
[2024-05-18 20:12:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 20:12:02] 
[2024-05-18 20:12:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 20:12:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 20:12:02] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 20:12:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 20:12:02] 
[2024-05-18 20:12:02] 2024-05-19 03:11:49,597 | INFO     | *************************************
[2024-05-18 20:12:02] 2024-05-19 03:11:50,099 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 20:12:02] 2024-05-19 03:11:50,133 | INFO     | sufficient remaining disk space (1733030838272 B)
[2024-05-18 20:12:02] 2024-05-19 03:11:50,133 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 20:12:02] 2024-05-19 03:11:50,134 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 20:12:02] 2024-05-19 03:11:50,141 | INFO     | all data control threads have been joined
[2024-05-18 20:12:02] 2024-05-19 03:11:50,241 | INFO     | all job control threads have been joined
[2024-05-18 20:12:02] 2024-05-19 03:11:50,540 | INFO     | all payload control threads have been joined
[2024-05-18 20:12:02] 2024-05-19 03:11:50,648 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 20:12:02] 2024-05-19 03:11:50,649 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 20:12:02] 2024-05-19 03:11:50,649 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 20:12:02] 2024-05-19 03:11:50,886 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 20:12:02] 2024-05-19 03:11:51,017 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 20:12:02] 2024-05-19 03:11:51,017 | INFO     | aborting loop
[2024-05-18 20:12:02] 2024-05-19 03:11:51,139 | INFO     | [job] retrieve thread has finished
[2024-05-18 20:12:02] 2024-05-19 03:11:51,139 | INFO     | [payload] failed_post thread has finished
[2024-05-18 20:12:02] 2024-05-19 03:11:51,146 | INFO     | [data] control thread has finished
[2024-05-18 20:12:02] 2024-05-19 03:11:51,245 | INFO     | [job] control thread has finished
[2024-05-18 20:12:02] 2024-05-19 03:11:51,265 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 20:12:02] 2024-05-19 03:11:51,538 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 20:12:02] 2024-05-19 03:11:51,543 | INFO     | [payload] control thread has finished
[2024-05-18 20:12:02] 2024-05-19 03:11:51,594 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 20:12:02] 2024-05-19 03:11:51,615 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 20:12:02] 2024-05-19 03:11:51,741 | INFO     | [payload] validate_post thread has finished
[2024-05-18 20:12:02] 2024-05-19 03:11:51,799 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 20:12:02] 2024-05-19 03:11:51,933 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 20:12:02] 2024-05-19 03:11:52,020 | INFO     | [job] job monitor thread has finished
[2024-05-18 20:12:02] 2024-05-19 03:11:52,096 | INFO     | [job] validate thread has finished
[2024-05-18 20:12:02] 2024-05-19 03:11:52,543 | INFO     | [data] copytool_in thread has finished
[2024-05-18 20:12:02] 2024-05-19 03:11:52,801 | INFO     | [job] queue monitor thread has finished
[2024-05-18 20:12:02] 2024-05-19 03:11:52,890 | INFO     | [data] copytool_out thread has finished
[2024-05-18 20:12:02] 2024-05-19 03:11:55,543 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 20:12:02] 2024-05-19 03:11:56,569 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140024852776768)>', '<ExcThread(monitor, started 140024557319936)>']
[2024-05-18 20:12:02] 2024-05-19 03:11:56,676 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 20:12:02] 2024-05-19 03:11:56,677 | INFO     | [monitor] control thread has ended
[2024-05-18 20:12:02] 2024-05-19 03:12:01,594 | INFO     | all workflow threads have been joined
[2024-05-18 20:12:02] 2024-05-19 03:12:01,594 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 20:12:02] 2024-05-19 03:12:01,594 | INFO     | traces error code: 0
[2024-05-18 20:12:02] 2024-05-19 03:12:01,594 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 20:12:02] 2024-05-19 03:12:01,685 [wrapper] ==== pilot stdout END ====
[2024-05-18 20:12:02] 2024-05-19 03:12:01,697 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 20:12:02] 2024-05-19 03:12:01,709 [wrapper] pilotpid: 28517
[2024-05-18 20:12:02] 2024-05-19 03:12:01,719 [wrapper] Pilot exit status: 0
[2024-05-18 20:12:02] 2024-05-19 03:12:01,782 [wrapper] pandaids: 6208568445
[2024-05-18 20:12:02] 2024-05-19 03:12:01,865 [wrapper] cleanup: SIGTERM to supervisor_pilot 245146 28518
[2024-05-18 20:12:02] 2024-05-19 03:12:01,876 [wrapper] Test setup, not cleaning
[2024-05-18 20:12:02] 2024-05-19 03:12:01,883 [wrapper] ==== wrapper stdout END ====
[2024-05-18 20:12:02] 2024-05-19 03:12:01,890 [wrapper] ==== wrapper stderr END ====
[2024-05-18 20:12:02] 2024-05-19 03:12:01,905 [wrapper] apfmon messages muted
[2024-05-18 20:12:02]  *** Error codes and diagnostics ***
[2024-05-18 20:12:02]     "exeErrorCode": 0,
[2024-05-18 20:12:02]     "exeErrorDiag": "",
[2024-05-18 20:12:02]     "pilotErrorCode": 0,
[2024-05-18 20:12:02]     "pilotErrorDiag": "",
[2024-05-18 20:12:02]  *** Listing of results directory ***
[2024-05-18 20:12:02] total 837660
[2024-05-18 20:12:02] -rw-r--r-- 1 boinc boinc    467845 May 17 23:44 pilot3.tar.gz
[2024-05-18 20:12:02] -rw-r--r-- 1 boinc boinc      5633 May 17 23:56 queuedata.json
[2024-05-18 20:12:02] -rwx------ 1 boinc boinc     32251 May 17 23:57 runpilot2-wrapper.sh
[2024-05-18 20:12:02] -rw-r--r-- 1 boinc boinc       100 May 18 17:48 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 20:12:02] -rwxr-xr-x 1 boinc boinc      7986 May 18 17:48 run_atlas
[2024-05-18 20:12:02] -rw-r--r-- 1 boinc boinc       105 May 18 17:48 job.xml
[2024-05-18 20:12:02] -rw-r--r-- 2 boinc boinc 602784539 May 18 17:49 EVNT.38776119._000464.pool.root.1
[2024-05-18 20:12:02] -rw-r--r-- 1 boinc boinc      6626 May 18 17:49 init_data.xml
[2024-05-18 20:12:02] drwxrwx--x 2 boinc boinc      4096 May 18 17:49 shared
[2024-05-18 20:12:02] -rw-r--r-- 2 boinc boinc    480017 May 18 17:49 input.tar.gz
[2024-05-18 20:12:02] -rw-r--r-- 2 boinc boinc     17537 May 18 17:49 start_atlas.sh
[2024-05-18 20:12:02] -rw-r--r-- 1 boinc boinc         0 May 18 17:49 boinc_lockfile
[2024-05-18 20:12:02] -rw-r--r-- 1 boinc boinc      2635 May 18 17:49 pandaJob.out
[2024-05-18 20:12:02] -rw------- 1 boinc boinc       424 May 18 17:49 setup.sh.local
[2024-05-18 20:12:02] -rw------- 1 boinc boinc   1013712 May 18 17:50 agis_schedconf.cvmfs.json
[2024-05-18 20:12:02] -rw------- 1 boinc boinc         0 May 18 17:50 agis_ddmendpoints.agis.ALL.json
[2024-05-18 20:12:02] -rw------- 1 boinc boinc   1324701 May 18 17:50 cric_ddmendpoints.json
[2024-05-18 20:12:02] drwx------ 4 boinc boinc      4096 May 18 17:50 pilot3
[2024-05-18 20:12:02] -rw------- 1 boinc boinc 249378160 May 18 20:10 HITS.38776125._016139.pool.root.1
[2024-05-18 20:12:02] -rw-r--r-- 1 boinc boinc       531 May 18 20:10 boinc_task_state.xml
[2024-05-18 20:12:02] -rw------- 1 boinc boinc        95 May 18 20:11 pilot_heartbeat.json
[2024-05-18 20:12:02] -rw------- 1 boinc boinc      1061 May 18 20:11 memory_monitor_summary.json
[2024-05-18 20:12:02] -rw------- 1 boinc boinc    382848 May 18 20:11 log.38776125._016139.job.log.tgz.1
[2024-05-18 20:12:02] -rw------- 1 boinc boinc      7777 May 18 20:11 heartbeat.json
[2024-05-18 20:12:02] -rw-r--r-- 1 boinc boinc        27 May 18 20:11 wrapper_checkpoint.txt
[2024-05-18 20:12:02] -rw-r--r-- 1 boinc boinc      8192 May 18 20:11 boinc_mmap_file
[2024-05-18 20:12:02] -rw------- 1 boinc boinc      4210 May 18 20:12 pilotlog.txt
[2024-05-18 20:12:02] -rw------- 1 boinc boinc    648644 May 18 20:12 log.38776125._016139.job.log.1
[2024-05-18 20:12:02] -rw------- 1 boinc boinc       357 May 18 20:12 output.list
[2024-05-18 20:12:02] -rw-r--r-- 1 boinc boinc       620 May 18 20:12 runtime_log
[2024-05-18 20:12:02] -rw------- 1 boinc boinc   1054720 May 18 20:12 result.tar.gz
[2024-05-18 20:12:02] -rw-r--r-- 1 boinc boinc     11286 May 18 20:12 runtime_log.err
[2024-05-18 20:12:02] -rw------- 1 boinc boinc       658 May 18 20:12 cknNDmyBTS5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmknLKDmnsrQ4n.diag
[2024-05-18 20:12:02] -rw-r--r-- 1 boinc boinc     21971 May 18 20:12 stderr.txt
[2024-05-18 20:12:02] HITS file was successfully produced:
[2024-05-18 20:12:02] -rw------- 1 boinc boinc 249378160 May 18 20:10 shared/HITS.pool.root.1
[2024-05-18 20:12:02]  *** Contents of shared directory: ***
[2024-05-18 20:12:02] total 833728
[2024-05-18 20:12:02] -rw-r--r-- 2 boinc boinc 602784539 May 18 17:49 ATLAS.root_0
[2024-05-18 20:12:02] -rw-r--r-- 2 boinc boinc    480017 May 18 17:49 input.tar.gz
[2024-05-18 20:12:02] -rw-r--r-- 2 boinc boinc     17537 May 18 17:49 start_atlas.sh
[2024-05-18 20:12:02] -rw------- 1 boinc boinc 249378160 May 18 20:10 HITS.pool.root.1
[2024-05-18 20:12:02] -rw------- 1 boinc boinc   1054720 May 18 20:12 result.tar.gz
20:12:03 (10149): run_atlas exited; CPU time 33356.857611
20:12:03 (10149): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN