Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:57:28 (2360222): wrapper (7.7.26015): starting
06:57:28 (2360222): wrapper: running run_atlas (--nthreads 12)
[2024-05-20 06:57:28] Arguments: --nthreads 12
[2024-05-20 06:57:28] Threads: 12
[2024-05-20 06:57:28] Checking for CVMFS
[2024-05-20 06:57:28] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-20 06:57:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-20 06:57:28] Running cvmfs_config stat atlas.cern.ch
[2024-05-20 06:57:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-20 06:57:28] 2.11.3.0 11199 15549 108380 132937 1 56 44716853 46080001 911 130560 0 21393219 99.964 2345504 37911 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2024-05-20 06:57:28] CVMFS is ok
[2024-05-20 06:57:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-20 06:57:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-20 06:57:28] Further information can be found at the LHC@home message board.
[2024-05-20 06:57:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-20 06:57:28] Checking for apptainer binary...
[2024-05-20 06:57:28] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-20 06:57:28] Running /usr/bin/apptainer --version
[2024-05-20 06:57:28] apptainer version 1.3.1-1.el7
[2024-05-20 06:57:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-20 06:57:28] minis01.farm.particle.cz
[2024-05-20 06:57:28] apptainer works
[2024-05-20 06:57:28] Set ATHENA_PROC_NUMBER=12
[2024-05-20 06:57:28] Set ATHENA_CORE_NUMBER=12
[2024-05-20 06:57:28] Starting ATLAS job with PandaID=6208568371
[2024-05-20 06:57:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-20 08:11:19]  *** The last 200 lines of the pilot log: ***
[2024-05-20 08:11:19]  guid=c2430881-11aa-4863-96ab-f1d019a43987
[2024-05-20 08:11:19]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-20 08:11:19]  is_tar=False
[2024-05-20 08:11:19]  lfn=log.38776125._016067.job.log.tgz.1
[2024-05-20 08:11:19]  mtime=0
[2024-05-20 08:11:19]  protocol_id=None
[2024-05-20 08:11:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-20 08:11:19]  replicas=None
[2024-05-20 08:11:19]  scope=mc23_13p6TeV
[2024-05-20 08:11:19]  status=None
[2024-05-20 08:11:19]  status_code=0
[2024-05-20 08:11:19]  storage_token=
[2024-05-20 08:11:19]  surl=/scratch/.boinc/slots/1/PanDA_Pilot-6208568371/log.38776125._016067.job.log.tgz.1
[2024-05-20 08:11:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a0/4e/log.38776125._016067.job.log.tgz.1
[2024-05-20 08:11:19]  workdir=None
[2024-05-20 08:11:19] ]
[2024-05-20 08:11:19] 2024-05-20 06:10:49,411 | INFO     | transferring file log.38776125._016067.job.log.tgz.1 from /scratch/.boinc/slots/1/PanDA_Pilot-6208568371/log.38776125._016067.job.log.tgz.1 to /scratch/.boinc/slot
[2024-05-20 08:11:19] 2024-05-20 06:10:49,411 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/1/PanDA_Pilot-6208568371/log.38776125._016067.job.log.tgz.1 /scratch/.boinc/slots/1/log.38776125._016067.j
[2024-05-20 08:11:19] 2024-05-20 06:10:49,435 | INFO     | adding to output.list: log.38776125._016067.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a0/4e/log.38776125._016067.job.log.tg
[2024-05-20 08:11:19] 2024-05-20 06:10:49,436 | INFO     | summary of transferred files:
[2024-05-20 08:11:19] 2024-05-20 06:10:49,436 | INFO     |  -- lfn=log.38776125._016067.job.log.tgz.1, status_code=0, status=transferred
[2024-05-20 08:11:19] 2024-05-20 06:10:49,436 | INFO     | stage-out finished correctly
[2024-05-20 08:11:19] 2024-05-20 06:10:49,544 | INFO     | monitor loop #349: job 0:6208568371 is in state 'finished'
[2024-05-20 08:11:19] 2024-05-20 06:10:49,555 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-20 08:11:19] 2024-05-20 06:10:52,068 | INFO     | monitor loop #350: job 0:6208568371 is in state 'finished'
[2024-05-20 08:11:19] 2024-05-20 06:10:52,068 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-20 08:11:19] 2024-05-20 06:10:52,952 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-20 08:11:19] 2024-05-20 06:10:53,045 | INFO     | job 6208568371 has state=finished
[2024-05-20 08:11:19] 2024-05-20 06:10:53,046 | INFO     | preparing for final server update for job 6208568371 in state='finished'
[2024-05-20 08:11:19] 2024-05-20 06:10:53,046 | INFO     | this job has now completed (state=finished)
[2024-05-20 08:11:19] 2024-05-20 06:10:53,046 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-20 08:11:19] 2024-05-20 06:10:53,047 | INFO     | job 6208568371 has finished - writing final server update
[2024-05-20 08:11:19] 2024-05-20 06:10:53,047 | INFO     | total number of processed events: 400 (read)
[2024-05-20 08:11:19] 2024-05-20 06:10:53,051 | INFO     | executing command: lscpu
[2024-05-20 08:11:19] 2024-05-20 06:10:53,093 | INFO     | found 16 cores (16 cores per socket, 1 sockets)
[2024-05-20 08:11:19] 2024-05-20 06:10:53,093 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-20 08:11:19] 2024-05-20 06:10:53,146 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-20 08:11:19] 2024-05-20 06:10:54,571 | INFO     | monitor loop #351: job 0:6208568371 is in state 'finished'
[2024-05-20 08:11:19] 2024-05-20 06:10:54,571 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-20 08:11:19] 2024-05-20 06:10:57,075 | INFO     | monitor loop #352: job 0:6208568371 is in state 'finished'
[2024-05-20 08:11:19] 2024-05-20 06:10:57,075 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-20 08:11:19] 2024-05-20 06:10:58,336 | INFO     | CPU arch script returned: x86-64-v3
[2024-05-20 08:11:19] 2024-05-20 06:10:58,336 | INFO     | using path: /scratch/.boinc/slots/1/PanDA_Pilot-6208568371/memory_monitor_summary.json (trf name=prmon)
[2024-05-20 08:11:19] 2024-05-20 06:10:58,337 | INFO     | extracted standard info from prmon json
[2024-05-20 08:11:19] 2024-05-20 06:10:58,338 | INFO     | extracted standard memory fields from prmon json
[2024-05-20 08:11:19] 2024-05-20 06:10:58,338 | WARNING  | GPU info not found in prmon json
[2024-05-20 08:11:19] 2024-05-20 06:10:58,338 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-20 08:11:19] 2024-05-20 06:10:58,338 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-20 08:11:19] 2024-05-20 06:10:58,341 | INFO     | fitting pss+swap vs Time
[2024-05-20 08:11:19] 2024-05-20 06:10:58,342 | INFO     | model: linear, x: [1716181391.0, 1716181452.0, 1716181513.0, 1716181574.0, 1716181635.0, 1716181696.0, 1716181757.0, 1716181818.0, 1716181879.0, 1716181940.0, 1716
[2024-05-20 08:11:19] 2024-05-20 06:10:58,342 | INFO     | sum of square deviations: 85136480.0
[2024-05-20 08:11:19] 2024-05-20 06:10:58,343 | INFO     | sum of deviations: 14563447623.0
[2024-05-20 08:11:19] 2024-05-20 06:10:58,343 | INFO     | mean x: 1716183343.0
[2024-05-20 08:11:19] 2024-05-20 06:10:58,343 | INFO     | mean y: 2629915.3384615383
[2024-05-20 08:11:19] 2024-05-20 06:10:58,343 | INFO     | -- intersect: -293567720036.2398
[2024-05-20 08:11:19] 2024-05-20 06:10:58,343 | INFO     | intersect: -293567720036.2398
[2024-05-20 08:11:19] 2024-05-20 06:10:58,344 | INFO     | chi2: 1.4860544761007284
[2024-05-20 08:11:19] 2024-05-20 06:10:58,344 | INFO     | -- intersect: -293567720036.2398
[2024-05-20 08:11:19] 2024-05-20 06:10:58,344 | INFO     | current memory leak: 171.06 B/s (using 65 data points, chi2=1.49)
[2024-05-20 08:11:19] 2024-05-20 06:10:58,345 | INFO     | ..............................
[2024-05-20 08:11:19] 2024-05-20 06:10:58,345 | INFO     | . Timing measurements:
[2024-05-20 08:11:19] 2024-05-20 06:10:58,345 | INFO     | . get job = 0 s
[2024-05-20 08:11:19] 2024-05-20 06:10:58,345 | INFO     | . initial setup = 1 s
[2024-05-20 08:11:19] 2024-05-20 06:10:58,345 | INFO     | . payload setup = 6 s
[2024-05-20 08:11:19] 2024-05-20 06:10:58,345 | INFO     | . stage-in = 0 s
[2024-05-20 08:11:19] 2024-05-20 06:10:58,346 | INFO     | . payload execution = 4362 s
[2024-05-20 08:11:19] 2024-05-20 06:10:58,346 | INFO     | . stage-out = 1 s
[2024-05-20 08:11:19] 2024-05-20 06:10:58,346 | INFO     | . log creation = 0 s
[2024-05-20 08:11:19] 2024-05-20 06:10:58,346 | INFO     | ..............................
[2024-05-20 08:11:19] 2024-05-20 06:10:58,489 | INFO     | 
[2024-05-20 08:11:19] 2024-05-20 06:10:58,489 | INFO     | job summary report
[2024-05-20 08:11:19] 2024-05-20 06:10:58,489 | INFO     | --------------------------------------------------
[2024-05-20 08:11:19] 2024-05-20 06:10:58,489 | INFO     | PanDA job id: 6208568371
[2024-05-20 08:11:19] 2024-05-20 06:10:58,489 | INFO     | task id: 38776125
[2024-05-20 08:11:19] 2024-05-20 06:10:58,490 | INFO     | errors: (none)
[2024-05-20 08:11:19] 2024-05-20 06:10:58,490 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-20 08:11:19] 2024-05-20 06:10:58,490 | INFO     | pilot state: finished 
[2024-05-20 08:11:19] 2024-05-20 06:10:58,490 | INFO     | transexitcode: 0
[2024-05-20 08:11:19] 2024-05-20 06:10:58,490 | INFO     | exeerrorcode: 0
[2024-05-20 08:11:19] 2024-05-20 06:10:58,490 | INFO     | exeerrordiag: 
[2024-05-20 08:11:19] 2024-05-20 06:10:58,490 | INFO     | exitcode: 0
[2024-05-20 08:11:19] 2024-05-20 06:10:58,491 | INFO     | exitmsg: OK
[2024-05-20 08:11:19] 2024-05-20 06:10:58,491 | INFO     | cpuconsumptiontime: 42513 s
[2024-05-20 08:11:19] 2024-05-20 06:10:58,491 | INFO     | nevents: 400
[2024-05-20 08:11:19] 2024-05-20 06:10:58,491 | INFO     | neventsw: 0
[2024-05-20 08:11:19] 2024-05-20 06:10:58,491 | INFO     | pid: 2371449
[2024-05-20 08:11:19] 2024-05-20 06:10:58,491 | INFO     | pgrp: 2371449
[2024-05-20 08:11:19] 2024-05-20 06:10:58,491 | INFO     | corecount: 12
[2024-05-20 08:11:19] 2024-05-20 06:10:58,492 | INFO     | event service: False
[2024-05-20 08:11:19] 2024-05-20 06:10:58,492 | INFO     | sizes: {0: 2392149, 1: 2392149, 5: 2392383, 11: 2392439, 4372: 2418526, 4375: 2427488, 4378: 2427672, 4384: 2427842}
[2024-05-20 08:11:19] 2024-05-20 06:10:58,492 | INFO     | --------------------------------------------------
[2024-05-20 08:11:19] 2024-05-20 06:10:58,492 | INFO     | 
[2024-05-20 08:11:19] 2024-05-20 06:10:58,492 | INFO     | executing command: ls -lF /scratch/.boinc/slots/1
[2024-05-20 08:11:19] 2024-05-20 06:10:58,519 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-20 08:11:19] 2024-05-20 06:10:58,520 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-20 08:11:19] 2024-05-20 06:10:58,520 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-20 08:11:19] 2024-05-20 06:10:58,520 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-20 08:11:19] 2024-05-20 06:10:58,520 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-20 08:11:19] 2024-05-20 06:10:58,520 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-20 08:11:19] 2024-05-20 06:10:58,521 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-20 08:11:19] 2024-05-20 06:10:58,521 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-20 08:11:19] 2024-05-20 06:10:58,521 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-20 08:11:19] 2024-05-20 06:10:58,521 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-20 08:11:19] 2024-05-20 06:10:58,521 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-20 08:11:19] 2024-05-20 06:10:58,521 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-20 08:11:19] 2024-05-20 06:10:58,522 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-20 08:11:19] 2024-05-20 06:10:58,522 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-20 08:11:19] 2024-05-20 06:10:58,522 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-20 08:11:19] 2024-05-20 06:10:58,522 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-20 08:11:19] 2024-05-20 06:10:58,522 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-20 08:11:19] 2024-05-20 06:10:58,522 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-20 08:11:19] 2024-05-20 06:10:58,522 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-20 08:11:19] 2024-05-20 06:10:58,523 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-20 08:11:19] 2024-05-20 06:10:58,523 | INFO     | job 6208568371 has completed (purged errors)
[2024-05-20 08:11:19] 2024-05-20 06:10:58,523 | INFO     | overall cleanup function is called
[2024-05-20 08:11:19] 2024-05-20 06:10:59,527 | INFO     | --- collectZombieJob: --- 10, [2371449]
[2024-05-20 08:11:19] 2024-05-20 06:10:59,527 | INFO     | zombie collector waiting for pid 2371449
[2024-05-20 08:11:19] 2024-05-20 06:10:59,528 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-20 08:11:19] 2024-05-20 06:11:00,533 | INFO     | collected zombie processes
[2024-05-20 08:11:19] 2024-05-20 06:11:00,533 | INFO     | will now attempt to kill all subprocesses of pid=2371449
[2024-05-20 08:11:19] 2024-05-20 06:11:00,661 | INFO     | process IDs to be killed: [2371449] (in reverse order)
[2024-05-20 08:11:19] 2024-05-20 06:11:00,738 | WARNING  | found no corresponding commands to process id(s)
[2024-05-20 08:11:19] 2024-05-20 06:11:00,739 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-20 08:11:19] 2024-05-20 06:11:00,748 | INFO     | did not find any defunct processes belonging to 2371449
[2024-05-20 08:11:19] 2024-05-20 06:11:00,757 | INFO     | did not find any defunct processes belonging to 2371449
[2024-05-20 08:11:19] 2024-05-20 06:11:00,757 | INFO     | ready for new job
[2024-05-20 08:11:19] 2024-05-20 06:11:00,757 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-20 08:11:19] 2024-05-20 06:11:00,759 | INFO     | *************************************
[2024-05-20 08:11:19] 2024-05-20 06:11:00,759 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-20 08:11:19] 2024-05-20 06:11:00,759 | INFO     | *************************************
[2024-05-20 08:11:19] 2024-05-20 06:11:00,759 | INFO     | 
[2024-05-20 08:11:19] 2024-05-20 06:11:00,762 | INFO     | architecture information:
[2024-05-20 08:11:19] 2024-05-20 06:11:00,762 | INFO     | executing command: cat /etc/os-release
[2024-05-20 08:11:19] 2024-05-20 06:11:00,780 | INFO     | cat /etc/os-release:
[2024-05-20 08:11:19] NAME="CentOS Linux"
[2024-05-20 08:11:19] VERSION="7 (Core)"
[2024-05-20 08:11:19] ID="centos"
[2024-05-20 08:11:19] ID_LIKE="rhel fedora"
[2024-05-20 08:11:19] VERSION_ID="7"
[2024-05-20 08:11:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-20 08:11:19] ANSI_COLOR="0;31"
[2024-05-20 08:11:19] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-20 08:11:19] HOME_URL="https://www.centos.org/"
[2024-05-20 08:11:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-20 08:11:19] 
[2024-05-20 08:11:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-20 08:11:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-20 08:11:19] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-20 08:11:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-20 08:11:19] 
[2024-05-20 08:11:19] 2024-05-20 06:11:00,780 | INFO     | *************************************
[2024-05-20 08:11:19] 2024-05-20 06:11:01,283 | INFO     | executing command: df -mP /scratch/.boinc/slots/1
[2024-05-20 08:11:19] 2024-05-20 06:11:01,301 | INFO     | sufficient remaining disk space (709941526528 B)
[2024-05-20 08:11:19] 2024-05-20 06:11:01,301 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-20 08:11:19] 2024-05-20 06:11:01,301 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-20 08:11:19] 2024-05-20 06:11:01,302 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-20 08:11:19] 2024-05-20 06:11:01,302 | INFO     | aborting loop
[2024-05-20 08:11:19] 2024-05-20 06:11:01,739 | INFO     | found 0 job(s) in 20 queues
[2024-05-20 08:11:19] 2024-05-20 06:11:01,739 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-20 08:11:19] 2024-05-20 06:11:01,740 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-20 08:11:19] 2024-05-20 06:11:01,921 | INFO     | all data control threads have been joined
[2024-05-20 08:11:19] 2024-05-20 06:11:01,928 | INFO     | all payload control threads have been joined
[2024-05-20 08:11:19] 2024-05-20 06:11:02,129 | INFO     | all job control threads have been joined
[2024-05-20 08:11:19] 2024-05-20 06:11:02,303 | INFO     | [job] job monitor thread has finished
[2024-05-20 08:11:19] 2024-05-20 06:11:02,307 | INFO     | [job] retrieve thread has finished
[2024-05-20 08:11:19] 2024-05-20 06:11:02,443 | INFO     | [job] validate thread has finished
[2024-05-20 08:11:19] 2024-05-20 06:11:02,612 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-20 08:11:19] 2024-05-20 06:11:02,683 | INFO     | [payload] validate_post thread has finished
[2024-05-20 08:11:19] 2024-05-20 06:11:02,831 | INFO     | [job] create_data_payload thread has finished
[2024-05-20 08:11:19] 2024-05-20 06:11:02,927 | INFO     | [data] control thread has finished
[2024-05-20 08:11:19] 2024-05-20 06:11:02,934 | INFO     | [payload] control thread has finished
[2024-05-20 08:11:19] 2024-05-20 06:11:02,955 | INFO     | [payload] validate_pre thread has finished
[2024-05-20 08:11:19] 2024-05-20 06:11:03,127 | INFO     | [payload] execute_payloads thread has finished
[2024-05-20 08:11:19] 2024-05-20 06:11:03,129 | INFO     | [job] control thread has finished
[2024-05-20 08:11:19] 2024-05-20 06:11:03,182 | INFO     | [data] copytool_in thread has finished
[2024-05-20 08:11:19] 2024-05-20 06:11:03,223 | INFO     | [payload] failed_post thread has finished
[2024-05-20 08:11:19] 2024-05-20 06:11:03,499 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-20 08:11:19] 2024-05-20 06:11:03,555 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-20 08:11:19] 2024-05-20 06:11:04,505 | INFO     | [job] queue monitor thread has finished
[2024-05-20 08:11:19] 2024-05-20 06:11:04,618 | INFO     | [data] copytool_out thread has finished
[2024-05-20 08:11:19] 2024-05-20 06:11:07,561 | INFO     | [data] queue_monitor thread has finished
[2024-05-20 08:11:19] 2024-05-20 06:11:12,150 | INFO     | job.realtimelogging is not enabled
[2024-05-20 08:11:19] 2024-05-20 06:11:13,155 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-20 08:11:19] 2024-05-20 06:11:14,099 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140523924686656)>', '<ExcThread(monitor, started 140523637548800)>']
[2024-05-20 08:11:19] 2024-05-20 06:11:14,782 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-20 08:11:19] 2024-05-20 06:11:14,783 | INFO     | [monitor] control thread has ended
[2024-05-20 08:11:19] 2024-05-20 06:11:19,125 | INFO     | all workflow threads have been joined
[2024-05-20 08:11:19] 2024-05-20 06:11:19,125 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-20 08:11:19] 2024-05-20 06:11:19,126 | INFO     | traces error code: 0
[2024-05-20 08:11:19] 2024-05-20 06:11:19,126 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-20 08:11:19] 2024-05-20 06:11:19,235 [wrapper] ==== pilot stdout END ====
[2024-05-20 08:11:19] 2024-05-20 06:11:19,239 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-20 08:11:19] 2024-05-20 06:11:19,243 [wrapper] pilotpid: 2364627
[2024-05-20 08:11:19] 2024-05-20 06:11:19,246 [wrapper] Pilot exit status: 0
[2024-05-20 08:11:19] 2024-05-20 06:11:19,259 [wrapper] pandaids: 6208568371
[2024-05-20 08:11:19] 2024-05-20 06:11:19,313 [wrapper] cleanup: SIGTERM to supervisor_pilot 2421283 2364628
[2024-05-20 08:11:19] 2024-05-20 06:11:19,317 [wrapper] Test setup, not cleaning
[2024-05-20 08:11:19] 2024-05-20 06:11:19,321 [wrapper] ==== wrapper stdout END ====
[2024-05-20 08:11:19] 2024-05-20 06:11:19,325 [wrapper] ==== wrapper stderr END ====
[2024-05-20 08:11:19] 2024-05-20 06:11:19,332 [wrapper] apfmon messages muted
[2024-05-20 08:11:19]  *** Error codes and diagnostics ***
[2024-05-20 08:11:19]     "exeErrorCode": 0,
[2024-05-20 08:11:19]     "exeErrorDiag": "",
[2024-05-20 08:11:19]     "pilotErrorCode": 0,
[2024-05-20 08:11:19]     "pilotErrorDiag": "",
[2024-05-20 08:11:19]  *** Listing of results directory ***
[2024-05-20 08:11:19] total 827080
[2024-05-20 08:11:19] -rw-r--r-- 1 boinc boinc      5633 May 18 08:44 queuedata.json
[2024-05-20 08:11:19] -rw-r--r-- 1 boinc boinc    467845 May 18 08:44 pilot3.tar.gz
[2024-05-20 08:11:19] -rwx------ 1 boinc boinc     32251 May 18 08:44 runpilot2-wrapper.sh
[2024-05-20 08:11:19] -rw-r--r-- 1 boinc boinc       100 May 20 06:57 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-20 08:11:19] -rwxr-xr-x 1 boinc boinc      7986 May 20 06:57 run_atlas
[2024-05-20 08:11:19] -rw-r--r-- 1 boinc boinc       105 May 20 06:57 job.xml
[2024-05-20 08:11:19] -rw-r--r-- 1 boinc boinc      6528 May 20 06:57 init_data.xml
[2024-05-20 08:11:19] -rw-r--r-- 2 boinc boinc 599291080 May 20 06:57 EVNT.38776119._000461.pool.root.1
[2024-05-20 08:11:19] -rw-r--r-- 2 boinc boinc     17537 May 20 06:57 start_atlas.sh
[2024-05-20 08:11:19] drwxrwx--x 2 boinc boinc      4096 May 20 06:57 shared
[2024-05-20 08:11:19] -rw-r--r-- 2 boinc boinc    480014 May 20 06:57 input.tar.gz
[2024-05-20 08:11:19] -rw-r--r-- 1 boinc boinc         0 May 20 06:57 boinc_lockfile
[2024-05-20 08:11:19] -rw-r--r-- 1 boinc boinc      2635 May 20 06:57 pandaJob.out
[2024-05-20 08:11:19] -rw------- 1 boinc boinc       424 May 20 06:57 setup.sh.local
[2024-05-20 08:11:19] -rw------- 1 boinc boinc   1013875 May 20 06:57 agis_schedconf.cvmfs.json
[2024-05-20 08:11:19] -rw------- 1 boinc boinc         0 May 20 06:57 agis_ddmendpoints.agis.ALL.json
[2024-05-20 08:11:19] -rw------- 1 boinc boinc   1324701 May 20 06:57 cric_ddmendpoints.json
[2024-05-20 08:11:19] drwx------ 4 boinc boinc      4096 May 20 06:57 pilot3
[2024-05-20 08:11:19] -rw-r--r-- 1 boinc boinc       530 May 20 08:10 boinc_task_state.xml
[2024-05-20 08:11:19] -rw------- 1 boinc boinc 242488115 May 20 08:10 HITS.38776125._016067.pool.root.1
[2024-05-20 08:11:19] -rw------- 1 boinc boinc      1035 May 20 08:10 memory_monitor_summary.json
[2024-05-20 08:11:19] -rw------- 1 boinc boinc    357719 May 20 08:10 log.38776125._016067.job.log.tgz.1
[2024-05-20 08:11:19] -rw------- 1 boinc boinc        95 May 20 08:10 pilot_heartbeat.json
[2024-05-20 08:11:19] -rw------- 1 boinc boinc      7717 May 20 08:10 heartbeat.json
[2024-05-20 08:11:19] -rw-r--r-- 1 boinc boinc      8192 May 20 08:11 boinc_mmap_file
[2024-05-20 08:11:19] -rw-r--r-- 1 boinc boinc        27 May 20 08:11 wrapper_checkpoint.txt
[2024-05-20 08:11:19] -rw------- 1 boinc boinc      4285 May 20 08:11 pilotlog.txt
[2024-05-20 08:11:19] -rw------- 1 boinc boinc    449772 May 20 08:11 log.38776125._016067.job.log.1
[2024-05-20 08:11:19] -rw------- 1 boinc boinc       357 May 20 08:11 output.list
[2024-05-20 08:11:19] -rw-r--r-- 1 boinc boinc       620 May 20 08:11 runtime_log
[2024-05-20 08:11:19] -rw------- 1 boinc boinc    829440 May 20 08:11 result.tar.gz
[2024-05-20 08:11:19] -rw-r--r-- 1 boinc boinc     11064 May 20 08:11 runtime_log.err
[2024-05-20 08:11:19] -rw------- 1 boinc boinc       659 May 20 08:11 5hhMDmAzSS5n7Olcko1bjSoqABFKDmABFKDmOtvXDmV7ZKDmO6IrRo.diag
[2024-05-20 08:11:19] -rw-r--r-- 1 boinc boinc     21524 May 20 08:11 stderr.txt
[2024-05-20 08:11:19] HITS file was successfully produced:
[2024-05-20 08:11:19] -rw------- 1 boinc boinc 242488115 May 20 08:10 shared/HITS.pool.root.1
[2024-05-20 08:11:19]  *** Contents of shared directory: ***
[2024-05-20 08:11:19] total 823368
[2024-05-20 08:11:19] -rw-r--r-- 2 boinc boinc 599291080 May 20 06:57 ATLAS.root_0
[2024-05-20 08:11:19] -rw-r--r-- 2 boinc boinc     17537 May 20 06:57 start_atlas.sh
[2024-05-20 08:11:19] -rw-r--r-- 2 boinc boinc    480014 May 20 06:57 input.tar.gz
[2024-05-20 08:11:19] -rw------- 1 boinc boinc 242488115 May 20 08:10 HITS.pool.root.1
[2024-05-20 08:11:19] -rw------- 1 boinc boinc    829440 May 20 08:11 result.tar.gz
08:11:20 (2360222): run_atlas exited; CPU time 42193.491933
08:11:20 (2360222): called boinc_finish(0)

</stderr_txt>
]]>

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