Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
05:44:41 (82324): wrapper (7.7.26015): starting
05:44:41 (82324): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 05:44:41] Arguments: --nthreads 12
[2024-05-18 05:44:41] Threads: 12
[2024-05-18 05:44:41] Checking for CVMFS
[2024-05-18 05:44:41] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 05:44:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 05:44:42] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 05:44:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 05:44:42] 2.10.1.0 127188 184932 161736 132879 0 106 43433562 45568001 14729 130560 0 1097305174 99.763 682272610 18202 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-05-18 05:44:42] CVMFS is ok
[2024-05-18 05:44:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 05:44:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 05:44:42] Further information can be found at the LHC@home message board.
[2024-05-18 05:44:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 05:44:42] Checking for apptainer binary...
[2024-05-18 05:44:42] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 05:44:42] Running /usr/bin/apptainer --version
[2024-05-18 05:44:42] apptainer version 1.1.8-1.el7
[2024-05-18 05:44:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 05:44:43] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0158.triumf.lcg
[2024-05-18 05:44:43] apptainer works
[2024-05-18 05:44:43] Set ATHENA_PROC_NUMBER=12
[2024-05-18 05:44:43] Set ATHENA_CORE_NUMBER=12
[2024-05-18 05:44:43] Starting ATLAS job with PandaID=6208567960
[2024-05-18 05:44:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 07:05:26]  *** The last 200 lines of the pilot log: ***
[2024-05-18 07:05:26]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-18 07:05:26]  is_tar=False
[2024-05-18 07:05:26]  lfn=log.38776125._015994.job.log.tgz.1
[2024-05-18 07:05:26]  mtime=0
[2024-05-18 07:05:26]  protocol_id=None
[2024-05-18 07:05:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-18 07:05:26]  replicas=None
[2024-05-18 07:05:26]  scope=mc23_13p6TeV
[2024-05-18 07:05:26]  status=None
[2024-05-18 07:05:26]  status_code=0
[2024-05-18 07:05:26]  storage_token=
[2024-05-18 07:05:26]  surl=/home/boinc/slots/0/PanDA_Pilot-6208567960/log.38776125._015994.job.log.tgz.1
[2024-05-18 07:05:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/32/log.38776125._015994.job.log.tgz.1
[2024-05-18 07:05:26]  workdir=None
[2024-05-18 07:05:26] ]
[2024-05-18 07:05:26] 2024-05-18 14:05:03,224 | INFO     | transferring file log.38776125._015994.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6208567960/log.38776125._015994.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-18 07:05:26] 2024-05-18 14:05:03,224 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6208567960/log.38776125._015994.job.log.tgz.1 /home/boinc/slots/0/log.38776125._015994.job.log.t
[2024-05-18 07:05:26] 2024-05-18 14:05:03,247 | INFO     | adding to output.list: log.38776125._015994.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/32/log.38776125._015994.job.log.tg
[2024-05-18 07:05:26] 2024-05-18 14:05:03,247 | INFO     | summary of transferred files:
[2024-05-18 07:05:26] 2024-05-18 14:05:03,248 | INFO     |  -- lfn=log.38776125._015994.job.log.tgz.1, status_code=0, status=transferred
[2024-05-18 07:05:26] 2024-05-18 14:05:03,248 | INFO     | stage-out finished correctly
[2024-05-18 07:05:26] 2024-05-18 14:05:04,355 | WARNING  | process 93137 is no longer using CPU - aborting
[2024-05-18 07:05:26] 2024-05-18 14:05:04,355 | INFO     | will not send any job update
[2024-05-18 07:05:26] 2024-05-18 14:05:05,458 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-18 07:05:26] 2024-05-18 14:05:06,816 | INFO     | job 6208567960 has state=finished
[2024-05-18 07:05:26] 2024-05-18 14:05:06,817 | INFO     | preparing for final server update for job 6208567960 in state='finished'
[2024-05-18 07:05:26] 2024-05-18 14:05:06,817 | INFO     | this job has now completed (state=finished)
[2024-05-18 07:05:26] 2024-05-18 14:05:06,817 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-18 07:05:26] 2024-05-18 14:05:06,817 | INFO     | job 6208567960 has finished - writing final server update
[2024-05-18 07:05:26] 2024-05-18 14:05:06,817 | INFO     | total number of processed events: 400 (read)
[2024-05-18 07:05:26] 2024-05-18 14:05:06,821 | INFO     | executing command: lscpu
[2024-05-18 07:05:26] 2024-05-18 14:05:06,858 | INFO     | monitor loop #368: job 0:6208567960 is in state 'finished'
[2024-05-18 07:05:26] 2024-05-18 14:05:06,859 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 07:05:26] 2024-05-18 14:05:06,865 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-18 07:05:26] 2024-05-18 14:05:06,865 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 07:05:26] 2024-05-18 14:05:06,913 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 07:05:26] 2024-05-18 14:05:09,362 | INFO     | monitor loop #369: job 0:6208567960 is in state 'finished'
[2024-05-18 07:05:26] 2024-05-18 14:05:09,362 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 07:05:26] 2024-05-18 14:05:10,924 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-18 07:05:26] 2024-05-18 14:05:10,925 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6208567960/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 07:05:26] 2024-05-18 14:05:10,926 | INFO     | extracted standard info from prmon json
[2024-05-18 07:05:26] 2024-05-18 14:05:10,926 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 07:05:26] 2024-05-18 14:05:10,926 | WARNING  | GPU info not found in prmon json
[2024-05-18 07:05:26] 2024-05-18 14:05:10,927 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 07:05:26] 2024-05-18 14:05:10,927 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 07:05:26] 2024-05-18 14:05:10,929 | INFO     | fitting pss+swap vs Time
[2024-05-18 07:05:26] 2024-05-18 14:05:10,929 | INFO     | model: linear, x: [1716036624.0, 1716036685.0, 1716036746.0, 1716036807.0, 1716036868.0, 1716036929.0, 1716036990.0, 1716037051.0, 1716037112.0, 1716037173.0, 1716
[2024-05-18 07:05:26] 2024-05-18 14:05:10,929 | INFO     | sum of square deviations: 115715658.0
[2024-05-18 07:05:26] 2024-05-18 14:05:10,930 | INFO     | sum of deviations: 20264900554.5
[2024-05-18 07:05:26] 2024-05-18 14:05:10,930 | INFO     | mean x: 1716038789.5
[2024-05-18 07:05:26] 2024-05-18 14:05:10,930 | INFO     | mean y: 2624851.0416666665
[2024-05-18 07:05:26] 2024-05-18 14:05:10,930 | INFO     | -- intersect: -300521574016.514
[2024-05-18 07:05:26] 2024-05-18 14:05:10,930 | INFO     | intersect: -300521574016.514
[2024-05-18 07:05:26] 2024-05-18 14:05:10,930 | INFO     | chi2: 2.3161671114044973
[2024-05-18 07:05:26] 2024-05-18 14:05:10,931 | INFO     | -- intersect: -300521574016.514
[2024-05-18 07:05:26] 2024-05-18 14:05:10,931 | INFO     | current memory leak: 175.13 B/s (using 72 data points, chi2=2.32)
[2024-05-18 07:05:26] 2024-05-18 14:05:10,931 | INFO     | ..............................
[2024-05-18 07:05:26] 2024-05-18 14:05:10,931 | INFO     | . Timing measurements:
[2024-05-18 07:05:26] 2024-05-18 14:05:10,931 | INFO     | . get job = 0 s
[2024-05-18 07:05:26] 2024-05-18 14:05:10,931 | INFO     | . initial setup = 2 s
[2024-05-18 07:05:26] 2024-05-18 14:05:10,932 | INFO     | . payload setup = 5 s
[2024-05-18 07:05:26] 2024-05-18 14:05:10,932 | INFO     | . stage-in = 0 s
[2024-05-18 07:05:26] 2024-05-18 14:05:10,932 | INFO     | . payload execution = 4783 s
[2024-05-18 07:05:26] 2024-05-18 14:05:10,932 | INFO     | . stage-out = 0 s
[2024-05-18 07:05:26] 2024-05-18 14:05:10,932 | INFO     | . log creation = 0 s
[2024-05-18 07:05:26] 2024-05-18 14:05:10,932 | INFO     | ..............................
[2024-05-18 07:05:26] 2024-05-18 14:05:11,014 | INFO     | 
[2024-05-18 07:05:26] 2024-05-18 14:05:11,015 | INFO     | job summary report
[2024-05-18 07:05:26] 2024-05-18 14:05:11,015 | INFO     | --------------------------------------------------
[2024-05-18 07:05:26] 2024-05-18 14:05:11,015 | INFO     | PanDA job id: 6208567960
[2024-05-18 07:05:26] 2024-05-18 14:05:11,015 | INFO     | task id: 38776125
[2024-05-18 07:05:26] 2024-05-18 14:05:11,015 | INFO     | errors: (none)
[2024-05-18 07:05:26] 2024-05-18 14:05:11,015 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 07:05:26] 2024-05-18 14:05:11,015 | INFO     | pilot state: finished 
[2024-05-18 07:05:26] 2024-05-18 14:05:11,015 | INFO     | transexitcode: 0
[2024-05-18 07:05:26] 2024-05-18 14:05:11,015 | INFO     | exeerrorcode: 0
[2024-05-18 07:05:26] 2024-05-18 14:05:11,015 | INFO     | exeerrordiag: 
[2024-05-18 07:05:26] 2024-05-18 14:05:11,016 | INFO     | exitcode: 0
[2024-05-18 07:05:26] 2024-05-18 14:05:11,016 | INFO     | exitmsg: OK
[2024-05-18 07:05:26] 2024-05-18 14:05:11,016 | INFO     | cpuconsumptiontime: 43146 s
[2024-05-18 07:05:26] 2024-05-18 14:05:11,016 | INFO     | nevents: 400
[2024-05-18 07:05:26] 2024-05-18 14:05:11,016 | INFO     | neventsw: 0
[2024-05-18 07:05:26] 2024-05-18 14:05:11,016 | INFO     | pid: 93137
[2024-05-18 07:05:26] 2024-05-18 14:05:11,016 | INFO     | pgrp: 93137
[2024-05-18 07:05:26] 2024-05-18 14:05:11,016 | INFO     | corecount: 12
[2024-05-18 07:05:26] 2024-05-18 14:05:11,016 | INFO     | event service: False
[2024-05-18 07:05:26] 2024-05-18 14:05:11,016 | INFO     | sizes: {0: 2392024, 1: 2392223, 5: 2392429, 11: 2392485, 4792: 2418672, 4795: 2427626, 4797: 2427810, 4802: 2427980}
[2024-05-18 07:05:26] 2024-05-18 14:05:11,016 | INFO     | --------------------------------------------------
[2024-05-18 07:05:26] 2024-05-18 14:05:11,017 | INFO     | 
[2024-05-18 07:05:26] 2024-05-18 14:05:11,017 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 07:05:26] 2024-05-18 14:05:11,045 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 07:05:26] 2024-05-18 14:05:11,045 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 07:05:26] 2024-05-18 14:05:11,045 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 07:05:26] 2024-05-18 14:05:11,046 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 07:05:26] 2024-05-18 14:05:11,046 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 07:05:26] 2024-05-18 14:05:11,046 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 07:05:26] 2024-05-18 14:05:11,046 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 07:05:26] 2024-05-18 14:05:11,046 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 07:05:26] 2024-05-18 14:05:11,046 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 07:05:26] 2024-05-18 14:05:11,046 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 07:05:26] 2024-05-18 14:05:11,046 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 07:05:26] 2024-05-18 14:05:11,046 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 07:05:26] 2024-05-18 14:05:11,046 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 07:05:26] 2024-05-18 14:05:11,046 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 07:05:26] 2024-05-18 14:05:11,046 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 07:05:26] 2024-05-18 14:05:11,047 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 07:05:26] 2024-05-18 14:05:11,047 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 07:05:26] 2024-05-18 14:05:11,047 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 07:05:26] 2024-05-18 14:05:11,047 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 07:05:26] 2024-05-18 14:05:11,047 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 07:05:26] 2024-05-18 14:05:11,047 | INFO     | job 6208567960 has completed (purged errors)
[2024-05-18 07:05:26] 2024-05-18 14:05:11,047 | INFO     | overall cleanup function is called
[2024-05-18 07:05:26] 2024-05-18 14:05:12,054 | INFO     | --- collectZombieJob: --- 10, [93137]
[2024-05-18 07:05:26] 2024-05-18 14:05:12,054 | INFO     | zombie collector waiting for pid 93137
[2024-05-18 07:05:26] 2024-05-18 14:05:12,054 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 07:05:26] 2024-05-18 14:05:12,371 | INFO     | 4820s have passed since pilot start
[2024-05-18 07:05:26] 2024-05-18 14:05:13,060 | INFO     | collected zombie processes
[2024-05-18 07:05:26] 2024-05-18 14:05:13,060 | INFO     | will now attempt to kill all subprocesses of pid=93137
[2024-05-18 07:05:26] 2024-05-18 14:05:13,289 | INFO     | process IDs to be killed: [93137] (in reverse order)
[2024-05-18 07:05:26] 2024-05-18 14:05:13,447 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 07:05:26] 2024-05-18 14:05:13,447 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 07:05:26] 2024-05-18 14:05:13,462 | INFO     | did not find any defunct processes belonging to 93137
[2024-05-18 07:05:26] 2024-05-18 14:05:13,476 | INFO     | did not find any defunct processes belonging to 93137
[2024-05-18 07:05:26] 2024-05-18 14:05:13,476 | INFO     | ready for new job
[2024-05-18 07:05:26] 2024-05-18 14:05:13,476 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 07:05:26] 2024-05-18 14:05:13,479 | INFO     | *************************************
[2024-05-18 07:05:26] 2024-05-18 14:05:13,479 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 07:05:26] 2024-05-18 14:05:13,479 | INFO     | *************************************
[2024-05-18 07:05:26] 2024-05-18 14:05:13,479 | INFO     | 
[2024-05-18 07:05:26] 2024-05-18 14:05:13,483 | INFO     | architecture information:
[2024-05-18 07:05:26] 2024-05-18 14:05:13,484 | INFO     | executing command: cat /etc/os-release
[2024-05-18 07:05:26] 2024-05-18 14:05:13,507 | INFO     | cat /etc/os-release:
[2024-05-18 07:05:26] NAME="CentOS Linux"
[2024-05-18 07:05:26] VERSION="7 (Core)"
[2024-05-18 07:05:26] ID="centos"
[2024-05-18 07:05:26] ID_LIKE="rhel fedora"
[2024-05-18 07:05:26] VERSION_ID="7"
[2024-05-18 07:05:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 07:05:26] ANSI_COLOR="0;31"
[2024-05-18 07:05:26] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 07:05:26] HOME_URL="https://www.centos.org/"
[2024-05-18 07:05:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 07:05:26] 
[2024-05-18 07:05:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 07:05:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 07:05:26] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 07:05:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 07:05:26] 
[2024-05-18 07:05:26] 2024-05-18 14:05:13,507 | INFO     | *************************************
[2024-05-18 07:05:26] 2024-05-18 14:05:14,010 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 07:05:26] 2024-05-18 14:05:14,032 | INFO     | sufficient remaining disk space (1924017422336 B)
[2024-05-18 07:05:26] 2024-05-18 14:05:14,033 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 07:05:26] 2024-05-18 14:05:14,033 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 07:05:26] 2024-05-18 14:05:14,034 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-18 07:05:26] 2024-05-18 14:05:14,034 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 07:05:26] 2024-05-18 14:05:14,034 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 07:05:26] 2024-05-18 14:05:14,034 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 07:05:26] 2024-05-18 14:05:14,034 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 07:05:26] 2024-05-18 14:05:14,057 | INFO     | all payload control threads have been joined
[2024-05-18 07:05:26] 2024-05-18 14:05:14,277 | INFO     | all job control threads have been joined
[2024-05-18 07:05:26] 2024-05-18 14:05:14,373 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-18 07:05:26] 2024-05-18 14:05:14,373 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-18 07:05:26] 2024-05-18 14:05:14,373 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 07:05:26] 2024-05-18 14:05:14,374 | INFO     | will abort loop
[2024-05-18 07:05:26] 2024-05-18 14:05:15,039 | INFO     | [job] retrieve thread has finished
[2024-05-18 07:05:26] 2024-05-18 14:05:15,058 | INFO     | [payload] control thread has finished
[2024-05-18 07:05:26] 2024-05-18 14:05:15,073 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 07:05:26] 2024-05-18 14:05:15,076 | INFO     | all data control threads have been joined
[2024-05-18 07:05:26] 2024-05-18 14:05:15,147 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 07:05:26] 2024-05-18 14:05:15,278 | INFO     | [job] control thread has finished
[2024-05-18 07:05:26] 2024-05-18 14:05:15,338 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 07:05:26] 2024-05-18 14:05:15,379 | INFO     | [job] job monitor thread has finished
[2024-05-18 07:05:26] 2024-05-18 14:05:15,449 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 07:05:26] 2024-05-18 14:05:15,452 | INFO     | [payload] failed_post thread has finished
[2024-05-18 07:05:26] 2024-05-18 14:05:15,836 | INFO     | [data] copytool_in thread has finished
[2024-05-18 07:05:26] 2024-05-18 14:05:16,024 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 07:05:26] 2024-05-18 14:05:16,037 | INFO     | [data] copytool_out thread has finished
[2024-05-18 07:05:26] 2024-05-18 14:05:16,065 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 07:05:26] 2024-05-18 14:05:16,080 | INFO     | [data] control thread has finished
[2024-05-18 07:05:26] 2024-05-18 14:05:16,152 | INFO     | [job] validate thread has finished
[2024-05-18 07:05:26] 2024-05-18 14:05:16,325 | INFO     | [payload] validate_post thread has finished
[2024-05-18 07:05:26] 2024-05-18 14:05:17,029 | INFO     | [job] queue monitor thread has finished
[2024-05-18 07:05:26] 2024-05-18 14:05:20,070 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 07:05:26] 2024-05-18 14:05:20,091 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140288005904192)>', '<ExcThread(monitor, started 140287456311040)>']
[2024-05-18 07:05:26] 2024-05-18 14:05:21,068 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 07:05:26] 2024-05-18 14:05:21,068 | INFO     | [monitor] control thread has ended
[2024-05-18 07:05:26] 2024-05-18 14:05:25,110 | INFO     | all workflow threads have been joined
[2024-05-18 07:05:26] 2024-05-18 14:05:25,110 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 07:05:26] 2024-05-18 14:05:25,111 | INFO     | traces error code: 0
[2024-05-18 07:05:26] 2024-05-18 14:05:25,111 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 07:05:26] 2024-05-18 14:05:25,211 [wrapper] ==== pilot stdout END ====
[2024-05-18 07:05:26] 2024-05-18 14:05:25,215 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 07:05:26] 2024-05-18 14:05:25,218 [wrapper] pilotpid: 86521
[2024-05-18 07:05:26] 2024-05-18 14:05:25,222 [wrapper] Pilot exit status: 0
[2024-05-18 07:05:26] 2024-05-18 14:05:25,235 [wrapper] pandaids: 6208567960
[2024-05-18 07:05:26] 2024-05-18 14:05:25,324 [wrapper] cleanup: SIGTERM to supervisor_pilot 151466 86522
[2024-05-18 07:05:26] 2024-05-18 14:05:25,327 [wrapper] Test setup, not cleaning
[2024-05-18 07:05:26] 2024-05-18 14:05:25,330 [wrapper] ==== wrapper stdout END ====
[2024-05-18 07:05:26] 2024-05-18 14:05:25,334 [wrapper] ==== wrapper stderr END ====
[2024-05-18 07:05:26] 2024-05-18 14:05:25,340 [wrapper] apfmon messages muted
[2024-05-18 07:05:26]  *** Error codes and diagnostics ***
[2024-05-18 07:05:26]     "exeErrorCode": 0,
[2024-05-18 07:05:26]     "exeErrorDiag": "",
[2024-05-18 07:05:26]     "pilotErrorCode": 0,
[2024-05-18 07:05:26]     "pilotErrorDiag": "",
[2024-05-18 07:05:26]  *** Listing of results directory ***
[2024-05-18 07:05:26] total 834272
[2024-05-18 07:05:26] -rw-r--r-- 1 boinc boinc    467845 May 17 22:36 pilot3.tar.gz
[2024-05-18 07:05:26] -rw-r--r-- 1 boinc boinc      5633 May 17 22:58 queuedata.json
[2024-05-18 07:05:26] -rwx------ 1 boinc boinc     32251 May 17 22:59 runpilot2-wrapper.sh
[2024-05-18 07:05:26] -rw-r--r-- 1 boinc boinc       100 May 18 05:44 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 07:05:26] -rwxr-xr-x 1 boinc boinc      7986 May 18 05:44 run_atlas
[2024-05-18 07:05:26] -rw-r--r-- 1 boinc boinc       105 May 18 05:44 job.xml
[2024-05-18 07:05:26] -rw-r--r-- 1 boinc boinc      6622 May 18 05:44 init_data.xml
[2024-05-18 07:05:26] -rw-r--r-- 2 boinc boinc 598894503 May 18 05:44 EVNT.38776119._000458.pool.root.1
[2024-05-18 07:05:26] drwxrwx--x 2 boinc boinc      4096 May 18 05:44 shared
[2024-05-18 07:05:26] -rw-r--r-- 2 boinc boinc    480007 May 18 05:44 input.tar.gz
[2024-05-18 07:05:26] -rw-r--r-- 2 boinc boinc     17537 May 18 05:44 start_atlas.sh
[2024-05-18 07:05:26] -rw-r--r-- 1 boinc boinc         0 May 18 05:44 boinc_lockfile
[2024-05-18 07:05:26] -rw-r--r-- 1 boinc boinc      2635 May 18 05:44 pandaJob.out
[2024-05-18 07:05:26] -rw------- 1 boinc boinc       424 May 18 05:44 setup.sh.local
[2024-05-18 07:05:26] -rw------- 1 boinc boinc   1019073 May 18 05:44 agis_schedconf.cvmfs.json
[2024-05-18 07:05:26] -rw------- 1 boinc boinc         0 May 18 05:44 agis_ddmendpoints.agis.ALL.json
[2024-05-18 07:05:26] -rw------- 1 boinc boinc   1324701 May 18 05:44 cric_ddmendpoints.json
[2024-05-18 07:05:26] drwx------ 4 boinc boinc      4096 May 18 05:44 pilot3
[2024-05-18 07:05:26] -rw------- 1 boinc boinc 250207519 May 18 07:04 HITS.38776125._015994.pool.root.1
[2024-05-18 07:05:26] -rw-r--r-- 1 boinc boinc       530 May 18 07:04 boinc_task_state.xml
[2024-05-18 07:05:26] -rw------- 1 boinc boinc      1061 May 18 07:04 memory_monitor_summary.json
[2024-05-18 07:05:26] -rw------- 1 boinc boinc    363875 May 18 07:05 log.38776125._015994.job.log.tgz.1
[2024-05-18 07:05:26] -rw------- 1 boinc boinc        95 May 18 07:05 pilot_heartbeat.json
[2024-05-18 07:05:26] -rw------- 1 boinc boinc      7779 May 18 07:05 heartbeat.json
[2024-05-18 07:05:26] -rw-r--r-- 1 boinc boinc        27 May 18 07:05 wrapper_checkpoint.txt
[2024-05-18 07:05:26] -rw-r--r-- 1 boinc boinc      8192 May 18 07:05 boinc_mmap_file
[2024-05-18 07:05:26] -rw------- 1 boinc boinc      4519 May 18 07:05 pilotlog.txt
[2024-05-18 07:05:26] -rw------- 1 boinc boinc    465152 May 18 07:05 log.38776125._015994.job.log.1
[2024-05-18 07:05:26] -rw------- 1 boinc boinc       357 May 18 07:05 output.list
[2024-05-18 07:05:26] -rw-r--r-- 1 boinc boinc       620 May 18 07:05 runtime_log
[2024-05-18 07:05:26] -rw------- 1 boinc boinc    849920 May 18 07:05 result.tar.gz
[2024-05-18 07:05:26] -rw-r--r-- 1 boinc boinc     11286 May 18 07:05 runtime_log.err
[2024-05-18 07:05:26] -rw------- 1 boinc boinc       654 May 18 07:05 P8DMDmKHSS5nsSi4apGgGQJmABFKDmABFKDm4ySLDm0ASKDmg1ui0n.diag
[2024-05-18 07:05:26] -rw-r--r-- 1 boinc boinc     21782 May 18 07:05 stderr.txt
[2024-05-18 07:05:26] HITS file was successfully produced:
[2024-05-18 07:05:26] -rw------- 1 boinc boinc 250207519 May 18 07:04 shared/HITS.pool.root.1
[2024-05-18 07:05:26]  *** Contents of shared directory: ***
[2024-05-18 07:05:26] total 830536
[2024-05-18 07:05:26] -rw-r--r-- 2 boinc boinc 598894503 May 18 05:44 ATLAS.root_0
[2024-05-18 07:05:26] -rw-r--r-- 2 boinc boinc    480007 May 18 05:44 input.tar.gz
[2024-05-18 07:05:26] -rw-r--r-- 2 boinc boinc     17537 May 18 05:44 start_atlas.sh
[2024-05-18 07:05:26] -rw------- 1 boinc boinc 250207519 May 18 07:04 HITS.pool.root.1
[2024-05-18 07:05:26] -rw------- 1 boinc boinc    849920 May 18 07:05 result.tar.gz
07:05:27 (82324): run_atlas exited; CPU time 42657.317585
07:05:27 (82324): called boinc_finish(0)

</stderr_txt>
]]>

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