Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
07:14:20 (259848): wrapper (7.7.26015): starting
07:14:20 (259848): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 07:14:20] Arguments: --nthreads 12
[2024-05-18 07:14:20] Threads: 12
[2024-05-18 07:14:20] Checking for CVMFS
[2024-05-18 07:14:20] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 07:14:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 07:14:21] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 07:14:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 07:14:21] 2.10.1.0 36926 185022 158840 132881 0 104 31930879 45568001 13089 130560 0 1074432281 99.766 656793893 18946 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-05-18 07:14:21] CVMFS is ok
[2024-05-18 07:14:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 07:14:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 07:14:21] Further information can be found at the LHC@home message board.
[2024-05-18 07:14:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 07:14:21] Checking for apptainer binary...
[2024-05-18 07:14:21] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 07:14:21] Running /usr/bin/apptainer --version
[2024-05-18 07:14:21] apptainer version 1.1.8-1.el7
[2024-05-18 07:14:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 07:14:22] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0114.triumf.lcg
[2024-05-18 07:14:22] apptainer works
[2024-05-18 07:14:22] Set ATHENA_PROC_NUMBER=12
[2024-05-18 07:14:22] Set ATHENA_CORE_NUMBER=12
[2024-05-18 07:14:22] Starting ATLAS job with PandaID=6208567961
[2024-05-18 07:14:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 08:28:20]  *** The last 200 lines of the pilot log: ***
[2024-05-18 08:28:20]  guid=a13bfb40-1529-45d2-a7bd-e3f325442707
[2024-05-18 08:28:20]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-18 08:28:20]  is_tar=False
[2024-05-18 08:28:20]  lfn=log.38776125._015995.job.log.tgz.1
[2024-05-18 08:28:20]  mtime=0
[2024-05-18 08:28:20]  protocol_id=None
[2024-05-18 08:28:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-18 08:28:20]  replicas=None
[2024-05-18 08:28:20]  scope=mc23_13p6TeV
[2024-05-18 08:28:20]  status=None
[2024-05-18 08:28:20]  status_code=0
[2024-05-18 08:28:20]  storage_token=
[2024-05-18 08:28:20]  surl=/home/boinc/slots/0/PanDA_Pilot-6208567961/log.38776125._015995.job.log.tgz.1
[2024-05-18 08:28:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/db/2c/log.38776125._015995.job.log.tgz.1
[2024-05-18 08:28:20]  workdir=None
[2024-05-18 08:28:20] ]
[2024-05-18 08:28:20] 2024-05-18 15:27:47,568 | INFO     | transferring file log.38776125._015995.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6208567961/log.38776125._015995.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-18 08:28:20] 2024-05-18 15:27:47,569 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6208567961/log.38776125._015995.job.log.tgz.1 /home/boinc/slots/0/log.38776125._015995.job.log.t
[2024-05-18 08:28:20] 2024-05-18 15:27:47,596 | INFO     | adding to output.list: log.38776125._015995.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/db/2c/log.38776125._015995.job.log.tg
[2024-05-18 08:28:20] 2024-05-18 15:27:47,597 | INFO     | summary of transferred files:
[2024-05-18 08:28:20] 2024-05-18 15:27:47,598 | INFO     |  -- lfn=log.38776125._015995.job.log.tgz.1, status_code=0, status=transferred
[2024-05-18 08:28:20] 2024-05-18 15:27:47,598 | INFO     | stage-out finished correctly
[2024-05-18 08:28:20] 2024-05-18 15:27:48,591 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-18 08:28:20] 2024-05-18 15:27:48,846 | INFO     | monitor loop #344: job 0:6208567961 is in state 'finished'
[2024-05-18 08:28:20] 2024-05-18 15:27:48,846 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 08:28:20] 2024-05-18 15:27:51,350 | INFO     | monitor loop #345: job 0:6208567961 is in state 'finished'
[2024-05-18 08:28:20] 2024-05-18 15:27:51,350 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 08:28:20] 2024-05-18 15:27:51,650 | INFO     | job 6208567961 has state=finished
[2024-05-18 08:28:20] 2024-05-18 15:27:51,650 | INFO     | preparing for final server update for job 6208567961 in state='finished'
[2024-05-18 08:28:20] 2024-05-18 15:27:51,651 | INFO     | this job has now completed (state=finished)
[2024-05-18 08:28:20] 2024-05-18 15:27:51,651 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-18 08:28:20] 2024-05-18 15:27:51,651 | INFO     | job 6208567961 has finished - writing final server update
[2024-05-18 08:28:20] 2024-05-18 15:27:51,652 | INFO     | total number of processed events: 400 (read)
[2024-05-18 08:28:20] 2024-05-18 15:27:51,658 | INFO     | executing command: lscpu
[2024-05-18 08:28:20] 2024-05-18 15:27:51,712 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-18 08:28:20] 2024-05-18 15:27:51,713 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 08:28:20] 2024-05-18 15:27:51,778 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 08:28:20] 2024-05-18 15:27:53,853 | INFO     | monitor loop #346: job 0:6208567961 is in state 'finished'
[2024-05-18 08:28:20] 2024-05-18 15:27:53,853 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 08:28:20] 2024-05-18 15:27:56,356 | INFO     | monitor loop #347: job 0:6208567961 is in state 'finished'
[2024-05-18 08:28:20] 2024-05-18 15:27:56,356 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 08:28:20] 2024-05-18 15:27:57,033 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-18 08:28:20] 2024-05-18 15:27:57,033 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6208567961/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 08:28:20] 2024-05-18 15:27:57,035 | INFO     | extracted standard info from prmon json
[2024-05-18 08:28:20] 2024-05-18 15:27:57,035 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 08:28:20] 2024-05-18 15:27:57,035 | WARNING  | GPU info not found in prmon json
[2024-05-18 08:28:20] 2024-05-18 15:27:57,035 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 08:28:20] 2024-05-18 15:27:57,035 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 08:28:20] 2024-05-18 15:27:57,038 | INFO     | fitting pss+swap vs Time
[2024-05-18 08:28:20] 2024-05-18 15:27:57,038 | INFO     | model: linear, x: [1716042010.0, 1716042071.0, 1716042132.0, 1716042193.0, 1716042254.0, 1716042315.0, 1716042376.0, 1716042437.0, 1716042498.0, 1716042559.0, 1716
[2024-05-18 08:28:20] 2024-05-18 15:27:57,038 | INFO     | sum of square deviations: 85136480.0
[2024-05-18 08:28:20] 2024-05-18 15:27:57,039 | INFO     | sum of deviations: 26474332449.999996
[2024-05-18 08:28:20] 2024-05-18 15:27:57,039 | INFO     | mean x: 1716043962.0
[2024-05-18 08:28:20] 2024-05-18 15:27:57,039 | INFO     | mean y: 2570921.107692308
[2024-05-18 08:28:20] 2024-05-18 15:27:57,039 | INFO     | -- intersect: -533624357850.2387
[2024-05-18 08:28:20] 2024-05-18 15:27:57,040 | INFO     | intersect: -533624357850.2387
[2024-05-18 08:28:20] 2024-05-18 15:27:57,040 | INFO     | chi2: 2.7939128938488733
[2024-05-18 08:28:20] 2024-05-18 15:27:57,040 | INFO     | -- intersect: -533624357850.2387
[2024-05-18 08:28:20] 2024-05-18 15:27:57,040 | INFO     | current memory leak: 310.96 B/s (using 65 data points, chi2=2.79)
[2024-05-18 08:28:20] 2024-05-18 15:27:57,041 | INFO     | ..............................
[2024-05-18 08:28:20] 2024-05-18 15:27:57,041 | INFO     | . Timing measurements:
[2024-05-18 08:28:20] 2024-05-18 15:27:57,041 | INFO     | . get job = 0 s
[2024-05-18 08:28:20] 2024-05-18 15:27:57,041 | INFO     | . initial setup = 2 s
[2024-05-18 08:28:20] 2024-05-18 15:27:57,041 | INFO     | . payload setup = 7 s
[2024-05-18 08:28:20] 2024-05-18 15:27:57,041 | INFO     | . stage-in = 0 s
[2024-05-18 08:28:20] 2024-05-18 15:27:57,041 | INFO     | . payload execution = 4362 s
[2024-05-18 08:28:20] 2024-05-18 15:27:57,041 | INFO     | . stage-out = 0 s
[2024-05-18 08:28:20] 2024-05-18 15:27:57,041 | INFO     | . log creation = 0 s
[2024-05-18 08:28:20] 2024-05-18 15:27:57,041 | INFO     | ..............................
[2024-05-18 08:28:20] 2024-05-18 15:27:57,108 | INFO     | 
[2024-05-18 08:28:20] 2024-05-18 15:27:57,108 | INFO     | job summary report
[2024-05-18 08:28:20] 2024-05-18 15:27:57,108 | INFO     | --------------------------------------------------
[2024-05-18 08:28:20] 2024-05-18 15:27:57,108 | INFO     | PanDA job id: 6208567961
[2024-05-18 08:28:20] 2024-05-18 15:27:57,108 | INFO     | task id: 38776125
[2024-05-18 08:28:20] 2024-05-18 15:27:57,108 | INFO     | errors: (none)
[2024-05-18 08:28:20] 2024-05-18 15:27:57,109 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 08:28:20] 2024-05-18 15:27:57,109 | INFO     | pilot state: finished 
[2024-05-18 08:28:20] 2024-05-18 15:27:57,109 | INFO     | transexitcode: 0
[2024-05-18 08:28:20] 2024-05-18 15:27:57,109 | INFO     | exeerrorcode: 0
[2024-05-18 08:28:20] 2024-05-18 15:27:57,109 | INFO     | exeerrordiag: 
[2024-05-18 08:28:20] 2024-05-18 15:27:57,109 | INFO     | exitcode: 0
[2024-05-18 08:28:20] 2024-05-18 15:27:57,109 | INFO     | exitmsg: OK
[2024-05-18 08:28:20] 2024-05-18 15:27:57,109 | INFO     | cpuconsumptiontime: 40097 s
[2024-05-18 08:28:20] 2024-05-18 15:27:57,109 | INFO     | nevents: 400
[2024-05-18 08:28:20] 2024-05-18 15:27:57,110 | INFO     | neventsw: 0
[2024-05-18 08:28:20] 2024-05-18 15:27:57,110 | INFO     | pid: 271734
[2024-05-18 08:28:20] 2024-05-18 15:27:57,110 | INFO     | pgrp: 271734
[2024-05-18 08:28:20] 2024-05-18 15:27:57,110 | INFO     | corecount: 12
[2024-05-18 08:28:20] 2024-05-18 15:27:57,110 | INFO     | event service: False
[2024-05-18 08:28:20] 2024-05-18 15:27:57,110 | INFO     | sizes: {0: 2392195, 6: 2392401, 11: 2392429, 4373: 2418478, 4374: 2418477, 4375: 2427487, 4376: 2427671, 4385: 2427841}
[2024-05-18 08:28:20] 2024-05-18 15:27:57,110 | INFO     | --------------------------------------------------
[2024-05-18 08:28:20] 2024-05-18 15:27:57,110 | INFO     | 
[2024-05-18 08:28:20] 2024-05-18 15:27:57,111 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 08:28:20] 2024-05-18 15:27:57,143 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 08:28:20] 2024-05-18 15:27:57,144 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 08:28:20] 2024-05-18 15:27:57,144 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 08:28:20] 2024-05-18 15:27:57,144 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 08:28:20] 2024-05-18 15:27:57,144 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 08:28:20] 2024-05-18 15:27:57,144 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 08:28:20] 2024-05-18 15:27:57,145 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 08:28:20] 2024-05-18 15:27:57,145 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 08:28:20] 2024-05-18 15:27:57,145 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 08:28:20] 2024-05-18 15:27:57,145 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 08:28:20] 2024-05-18 15:27:57,145 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 08:28:20] 2024-05-18 15:27:57,145 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 08:28:20] 2024-05-18 15:27:57,145 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 08:28:20] 2024-05-18 15:27:57,145 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 08:28:20] 2024-05-18 15:27:57,146 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 08:28:20] 2024-05-18 15:27:57,146 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 08:28:20] 2024-05-18 15:27:57,146 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 08:28:20] 2024-05-18 15:27:57,146 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 08:28:20] 2024-05-18 15:27:57,146 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 08:28:20] 2024-05-18 15:27:57,146 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 08:28:20] 2024-05-18 15:27:57,146 | INFO     | job 6208567961 has completed (purged errors)
[2024-05-18 08:28:20] 2024-05-18 15:27:57,147 | INFO     | overall cleanup function is called
[2024-05-18 08:28:20] 2024-05-18 15:27:58,156 | INFO     | --- collectZombieJob: --- 10, [271734]
[2024-05-18 08:28:20] 2024-05-18 15:27:58,157 | INFO     | zombie collector waiting for pid 271734
[2024-05-18 08:28:20] 2024-05-18 15:27:58,157 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 08:28:20] 2024-05-18 15:27:59,162 | INFO     | collected zombie processes
[2024-05-18 08:28:20] 2024-05-18 15:27:59,162 | INFO     | will now attempt to kill all subprocesses of pid=271734
[2024-05-18 08:28:20] 2024-05-18 15:27:59,322 | INFO     | process IDs to be killed: [271734] (in reverse order)
[2024-05-18 08:28:20] 2024-05-18 15:27:59,430 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 08:28:20] 2024-05-18 15:27:59,431 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 08:28:20] 2024-05-18 15:27:59,440 | INFO     | did not find any defunct processes belonging to 271734
[2024-05-18 08:28:20] 2024-05-18 15:27:59,446 | INFO     | did not find any defunct processes belonging to 271734
[2024-05-18 08:28:20] 2024-05-18 15:27:59,446 | INFO     | ready for new job
[2024-05-18 08:28:20] 2024-05-18 15:27:59,446 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 08:28:20] 2024-05-18 15:27:59,447 | INFO     | *************************************
[2024-05-18 08:28:20] 2024-05-18 15:27:59,448 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 08:28:20] 2024-05-18 15:27:59,448 | INFO     | *************************************
[2024-05-18 08:28:20] 2024-05-18 15:27:59,448 | INFO     | 
[2024-05-18 08:28:20] 2024-05-18 15:27:59,450 | INFO     | architecture information:
[2024-05-18 08:28:20] 2024-05-18 15:27:59,451 | INFO     | executing command: cat /etc/os-release
[2024-05-18 08:28:20] 2024-05-18 15:27:59,470 | INFO     | cat /etc/os-release:
[2024-05-18 08:28:20] NAME="CentOS Linux"
[2024-05-18 08:28:20] VERSION="7 (Core)"
[2024-05-18 08:28:20] ID="centos"
[2024-05-18 08:28:20] ID_LIKE="rhel fedora"
[2024-05-18 08:28:20] VERSION_ID="7"
[2024-05-18 08:28:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 08:28:20] ANSI_COLOR="0;31"
[2024-05-18 08:28:20] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 08:28:20] HOME_URL="https://www.centos.org/"
[2024-05-18 08:28:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 08:28:20] 
[2024-05-18 08:28:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 08:28:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 08:28:20] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 08:28:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 08:28:20] 
[2024-05-18 08:28:20] 2024-05-18 15:27:59,470 | INFO     | *************************************
[2024-05-18 08:28:20] 2024-05-18 15:27:59,972 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 08:28:20] 2024-05-18 15:27:59,993 | INFO     | sufficient remaining disk space (2175275106304 B)
[2024-05-18 08:28:20] 2024-05-18 15:27:59,994 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 08:28:20] 2024-05-18 15:27:59,994 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 08:28:20] 2024-05-18 15:27:59,995 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 08:28:20] 2024-05-18 15:27:59,995 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 08:28:20] 2024-05-18 15:27:59,995 | INFO     | aborting loop
[2024-05-18 08:28:20] 2024-05-18 15:28:00,083 | INFO     | all payload control threads have been joined
[2024-05-18 08:28:20] 2024-05-18 15:28:00,174 | INFO     | all job control threads have been joined
[2024-05-18 08:28:20] 2024-05-18 15:28:00,416 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 08:28:20] 2024-05-18 15:28:00,416 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 08:28:20] 2024-05-18 15:28:00,417 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 08:28:20] 2024-05-18 15:28:00,683 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 08:28:20] 2024-05-18 15:28:00,855 | INFO     | all data control threads have been joined
[2024-05-18 08:28:20] 2024-05-18 15:28:00,999 | INFO     | [job] retrieve thread has finished
[2024-05-18 08:28:20] 2024-05-18 15:28:01,001 | INFO     | [job] job monitor thread has finished
[2024-05-18 08:28:20] 2024-05-18 15:28:01,047 | INFO     | [job] validate thread has finished
[2024-05-18 08:28:20] 2024-05-18 15:28:01,088 | INFO     | [payload] control thread has finished
[2024-05-18 08:28:20] 2024-05-18 15:28:01,180 | INFO     | [job] control thread has finished
[2024-05-18 08:28:20] 2024-05-18 15:28:01,312 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 08:28:20] 2024-05-18 15:28:01,682 | INFO     | [payload] failed_post thread has finished
[2024-05-18 08:28:20] 2024-05-18 15:28:01,857 | INFO     | [data] control thread has finished
[2024-05-18 08:28:20] 2024-05-18 15:28:02,049 | INFO     | [payload] validate_post thread has finished
[2024-05-18 08:28:20] 2024-05-18 15:28:02,097 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 08:28:20] 2024-05-18 15:28:02,115 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 08:28:20] 2024-05-18 15:28:02,320 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 08:28:20] 2024-05-18 15:28:02,430 | INFO     | [data] copytool_in thread has finished
[2024-05-18 08:28:20] 2024-05-18 15:28:02,688 | INFO     | [data] copytool_out thread has finished
[2024-05-18 08:28:20] 2024-05-18 15:28:03,118 | INFO     | [job] queue monitor thread has finished
[2024-05-18 08:28:20] 2024-05-18 15:28:03,997 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 08:28:20] 2024-05-18 15:28:10,576 | INFO     | job.realtimelogging is not enabled
[2024-05-18 08:28:20] 2024-05-18 15:28:11,583 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 08:28:20] 2024-05-18 15:28:13,633 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140241033140032)>', '<ExcThread(monitor, started 140240480106240)>']
[2024-05-18 08:28:20] 2024-05-18 15:28:14,476 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 08:28:20] 2024-05-18 15:28:14,477 | INFO     | [monitor] control thread has ended
[2024-05-18 08:28:20] 2024-05-18 15:28:18,659 | INFO     | all workflow threads have been joined
[2024-05-18 08:28:20] 2024-05-18 15:28:18,659 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 08:28:20] 2024-05-18 15:28:18,660 | INFO     | traces error code: 0
[2024-05-18 08:28:20] 2024-05-18 15:28:18,660 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 08:28:20] 2024-05-18 15:28:18,748 [wrapper] ==== pilot stdout END ====
[2024-05-18 08:28:20] 2024-05-18 15:28:18,753 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 08:28:20] 2024-05-18 15:28:18,757 [wrapper] pilotpid: 264104
[2024-05-18 08:28:20] 2024-05-18 15:28:18,761 [wrapper] Pilot exit status: 0
[2024-05-18 08:28:20] 2024-05-18 15:28:18,775 [wrapper] pandaids: 6208567961
[2024-05-18 08:28:20] 2024-05-18 15:28:18,848 [wrapper] cleanup: SIGTERM to supervisor_pilot 259068 264105
[2024-05-18 08:28:20] 2024-05-18 15:28:18,852 [wrapper] Test setup, not cleaning
[2024-05-18 08:28:20] 2024-05-18 15:28:18,855 [wrapper] ==== wrapper stdout END ====
[2024-05-18 08:28:20] 2024-05-18 15:28:18,858 [wrapper] ==== wrapper stderr END ====
[2024-05-18 08:28:20] 2024-05-18 15:28:18,864 [wrapper] apfmon messages muted
[2024-05-18 08:28:20]  *** Error codes and diagnostics ***
[2024-05-18 08:28:20]     "exeErrorCode": 0,
[2024-05-18 08:28:20]     "exeErrorDiag": "",
[2024-05-18 08:28:20]     "pilotErrorCode": 0,
[2024-05-18 08:28:20]     "pilotErrorDiag": "",
[2024-05-18 08:28:20]  *** Listing of results directory ***
[2024-05-18 08:28:20] total 826432
[2024-05-18 08:28:20] -rw-r--r-- 1 boinc boinc    467845 May 17 22:36 pilot3.tar.gz
[2024-05-18 08:28:20] -rw-r--r-- 1 boinc boinc      5633 May 17 22:58 queuedata.json
[2024-05-18 08:28:20] -rwx------ 1 boinc boinc     32251 May 17 22:59 runpilot2-wrapper.sh
[2024-05-18 08:28:20] -rw-r--r-- 1 boinc boinc       100 May 18 07:14 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 08:28:20] -rwxr-xr-x 1 boinc boinc      7986 May 18 07:14 run_atlas
[2024-05-18 08:28:20] -rw-r--r-- 1 boinc boinc       105 May 18 07:14 job.xml
[2024-05-18 08:28:20] -rw-r--r-- 2 boinc boinc 598894503 May 18 07:14 EVNT.38776119._000458.pool.root.1
[2024-05-18 08:28:20] -rw-r--r-- 1 boinc boinc      6622 May 18 07:14 init_data.xml
[2024-05-18 08:28:20] -rw-r--r-- 2 boinc boinc     17537 May 18 07:14 start_atlas.sh
[2024-05-18 08:28:20] drwxrwx--x 2 boinc boinc      4096 May 18 07:14 shared
[2024-05-18 08:28:20] -rw-r--r-- 2 boinc boinc    480008 May 18 07:14 input.tar.gz
[2024-05-18 08:28:20] -rw-r--r-- 1 boinc boinc         0 May 18 07:14 boinc_lockfile
[2024-05-18 08:28:20] -rw-r--r-- 1 boinc boinc      2635 May 18 07:14 pandaJob.out
[2024-05-18 08:28:20] -rw------- 1 boinc boinc       424 May 18 07:14 setup.sh.local
[2024-05-18 08:28:20] -rw------- 1 boinc boinc   1019434 May 18 07:14 agis_schedconf.cvmfs.json
[2024-05-18 08:28:20] -rw------- 1 boinc boinc         0 May 18 07:14 agis_ddmendpoints.agis.ALL.json
[2024-05-18 08:28:20] -rw------- 1 boinc boinc   1324701 May 18 07:14 cric_ddmendpoints.json
[2024-05-18 08:28:20] drwx------ 4 boinc boinc      4096 May 18 07:14 pilot3
[2024-05-18 08:28:20] -rw------- 1 boinc boinc 242237586 May 18 08:27 HITS.38776125._015995.pool.root.1
[2024-05-18 08:28:20] -rw-r--r-- 1 boinc boinc       530 May 18 08:27 boinc_task_state.xml
[2024-05-18 08:28:20] -rw------- 1 boinc boinc      1056 May 18 08:27 memory_monitor_summary.json
[2024-05-18 08:28:20] -rw------- 1 boinc boinc        95 May 18 08:27 pilot_heartbeat.json
[2024-05-18 08:28:20] -rw------- 1 boinc boinc    361360 May 18 08:27 log.38776125._015995.job.log.tgz.1
[2024-05-18 08:28:20] -rw------- 1 boinc boinc      7771 May 18 08:27 heartbeat.json
[2024-05-18 08:28:20] -rw-r--r-- 1 boinc boinc      8192 May 18 08:28 boinc_mmap_file
[2024-05-18 08:28:20] -rw-r--r-- 1 boinc boinc        27 May 18 08:28 wrapper_checkpoint.txt
[2024-05-18 08:28:20] -rw------- 1 boinc boinc      4282 May 18 08:28 pilotlog.txt
[2024-05-18 08:28:20] -rw------- 1 boinc boinc    437737 May 18 08:28 log.38776125._015995.job.log.1
[2024-05-18 08:28:20] -rw------- 1 boinc boinc       357 May 18 08:28 output.list
[2024-05-18 08:28:20] -rw-r--r-- 1 boinc boinc       620 May 18 08:28 runtime_log
[2024-05-18 08:28:20] -rw------- 1 boinc boinc    819200 May 18 08:28 result.tar.gz
[2024-05-18 08:28:20] -rw------- 1 boinc boinc       651 May 18 08:28 A1FMDmKHSS5nsSi4apGgGQJmABFKDmABFKDm4ySLDm1ASKDmm08NYo.diag
[2024-05-18 08:28:20] -rw-r--r-- 1 boinc boinc     11286 May 18 08:28 runtime_log.err
[2024-05-18 08:28:20] -rw-r--r-- 1 boinc boinc     21810 May 18 08:28 stderr.txt
[2024-05-18 08:28:20] HITS file was successfully produced:
[2024-05-18 08:28:20] -rw------- 1 boinc boinc 242237586 May 18 08:27 shared/HITS.pool.root.1
[2024-05-18 08:28:20]  *** Contents of shared directory: ***
[2024-05-18 08:28:20] total 822724
[2024-05-18 08:28:20] -rw-r--r-- 2 boinc boinc 598894503 May 18 07:14 ATLAS.root_0
[2024-05-18 08:28:20] -rw-r--r-- 2 boinc boinc     17537 May 18 07:14 start_atlas.sh
[2024-05-18 08:28:20] -rw-r--r-- 2 boinc boinc    480008 May 18 07:14 input.tar.gz
[2024-05-18 08:28:20] -rw------- 1 boinc boinc 242237586 May 18 08:27 HITS.pool.root.1
[2024-05-18 08:28:20] -rw------- 1 boinc boinc    819200 May 18 08:28 result.tar.gz
08:28:21 (259848): run_atlas exited; CPU time 39938.117169
08:28:21 (259848): called boinc_finish(0)

</stderr_txt>
]]>

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