Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2024-05-18 12:01:23 (10288): vboxwrapper version 26207
2024-05-18 12:01:23 (10288): BOINC client version: 7.20.2
2024-05-18 12:01:24 (10288): Detected: VirtualBox VboxManage Interface (Version: 7.0.12)
2024-05-18 12:01:24 (10288): Successfully copied 'init_data.xml' to the shared directory.
2024-05-18 12:01:24 (10288): Create VM. (boinc_8ea6c47d7d95d2c5, slot#3)
2024-05-18 12:01:25 (10288): Setting Memory Size for VM. (4096MB)
2024-05-18 12:01:25 (10288): Setting CPU Count for VM. (5)
2024-05-18 12:01:25 (10288): Setting Chipset Options for VM.
2024-05-18 12:01:26 (10288): Setting Graphics Controller Options for VM.
2024-05-18 12:01:26 (10288): Setting Boot Options for VM.
2024-05-18 12:01:26 (10288): Setting Network Configuration for NAT.
2024-05-18 12:01:27 (10288): Enabling VM Network Access.
2024-05-18 12:01:27 (10288): Disabling USB Support for VM.
2024-05-18 12:01:27 (10288): Disabling COM Port Support for VM.
2024-05-18 12:01:28 (10288): Disabling LPT Port Support for VM.
2024-05-18 12:01:28 (10288): Disabling Audio Support for VM.
2024-05-18 12:01:28 (10288): Disabling Clipboard Support for VM.
2024-05-18 12:01:28 (10288): Disabling Drag and Drop Support for VM.
2024-05-18 12:01:29 (10288): Adding storage controller(s) to VM.
2024-05-18 12:01:29 (10288): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-05-18 12:01:29 (10288): Adding VirtualBox Guest Additions to VM.
2024-05-18 12:01:30 (10288): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-05-18 12:01:30 (10288): forwarding host port 61314 to guest port 80
2024-05-18 12:01:30 (10288): Enabling remote desktop for VM.
2024-05-18 12:01:31 (10288): Enabling shared directory for VM.
2024-05-18 12:01:32 (10288): Starting VM using VBoxManage interface. (boinc_8ea6c47d7d95d2c5, slot#3)
2024-05-18 12:01:38 (10288): Successfully started VM. (PID = '5260')
2024-05-18 12:01:38 (10288): Reporting VM Process ID to BOINC.
2024-05-18 12:01:38 (10288): Guest Log: BIOS: VirtualBox 7.0.12
2024-05-18 12:01:38 (10288): Guest Log: CPUID EDX: 0x178bfbff
2024-05-18 12:01:38 (10288): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-05-18 12:01:38 (10288): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-05-18 12:01:38 (10288): VM state change detected. (old = 'poweredoff', new = 'running')
2024-05-18 12:01:38 (10288): Detected: Web Application Enabled (http://localhost:61314)
2024-05-18 12:01:38 (10288): Detected: Remote Desktop Enabled (localhost:61315)
2024-05-18 12:01:38 (10288): Preference change detected
2024-05-18 12:01:38 (10288): Setting CPU throttle for VM. (100%)
2024-05-18 12:01:39 (10288): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2024-05-18 12:01:40 (10288): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-05-18 12:01:40 (10288): Guest Log: BIOS: Booting from Hard Disk...
2024-05-18 12:01:43 (10288): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-05-18 12:01:43 (10288): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-05-18 12:01:43 (10288): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-05-18 12:01:43 (10288): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-05-18 12:01:43 (10288): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-05-18 12:01:43 (10288): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-05-18 12:01:43 (10288): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-05-18 12:01:43 (10288): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-05-18 12:01:43 (10288): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-05-18 12:01:43 (10288): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-05-18 12:01:43 (10288): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-05-18 12:01:43 (10288): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-05-18 12:01:43 (10288): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-05-18 12:01:43 (10288): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-05-18 12:01:43 (10288): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-05-18 12:01:43 (10288): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-05-18 12:01:43 (10288): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-05-18 12:01:43 (10288): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-05-18 12:01:43 (10288): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-05-18 12:01:43 (10288): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-05-18 12:01:43 (10288): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-05-18 12:01:43 (10288): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-05-18 12:01:43 (10288): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-05-18 12:01:43 (10288): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-05-18 12:01:43 (10288): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-05-18 12:01:43 (10288): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-05-18 12:01:43 (10288): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-05-18 12:01:43 (10288): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-05-18 12:01:43 (10288): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-05-18 12:01:43 (10288): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-05-18 12:01:43 (10288): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-05-18 12:01:43 (10288): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-05-18 12:01:52 (10288): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-05-18 12:01:52 (10288): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-05-18 12:02:06 (10288): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-05-18 12:02:06 (10288): Guest Log: 00:00:00.000144 main     Log opened 2024-05-18T10:02:05.115421000Z
2024-05-18 12:02:06 (10288): Guest Log: 00:00:00.000231 main     OS Product: Linux
2024-05-18 12:02:06 (10288): Guest Log: 00:00:00.000283 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-05-18 12:02:06 (10288): Guest Log: 00:00:00.000312 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-05-18 12:02:06 (10288): Guest Log: 00:00:00.000338 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-05-18 12:02:06 (10288): Guest Log: 00:00:00.000339 main     Process ID: 1320
2024-05-18 12:02:06 (10288): Guest Log: 00:00:00.000340 main     Package type: LINUX_64BITS_GENERIC
2024-05-18 12:02:06 (10288): Guest Log: 00:00:00.000860 main     5.2.32 r132073 started. Verbose level = 0
2024-05-18 12:02:07 (10288): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-05-18 12:02:07 (10288): Guest Log: [INFO] Mounting shared directory
2024-05-18 12:02:07 (10288): Guest Log: [INFO] Checking for init_data.xml
2024-05-18 12:02:11 (10288): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-05-18 12:02:11 (10288): Guest Log: [INFO] Detected branch: prod
2024-05-18 12:02:11 (10288): Guest Log: This is the prod version of the ATLAS job wrapper
2024-05-18 12:02:11 (10288): Guest Log: Copying input files
2024-05-18 12:02:17 (10288): Guest Log: Copied input files into RunAtlas.
2024-05-18 12:02:17 (10288): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-05-18 12:02:17 (10288): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-05-18 12:02:17 (10288): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-05-18 12:02:17 (10288): Guest Log: Further information can be found at the LHC@home message board.
2024-05-18 12:02:28 (10288): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-05-18 12:02:29 (10288): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-05-18 12:02:29 (10288): Guest Log: 2.6.3.0 1596 0 30196 132874 4 1 3116989 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2024-05-18 12:02:32 (10288): Guest Log: copied the webapp to /var/www
2024-05-18 12:02:32 (10288): Guest Log: ATHENA_PROC_NUMBER=5
2024-05-18 12:02:32 (10288): Guest Log: ATHENA_CORE_NUMBER=5
2024-05-18 12:02:32 (10288): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-05-18 12:02:32 (10288): Guest Log:  *** Starting ATLAS job. (PandaID=6208546456 taskID=38776104) ***
2024-05-18 13:31:10 (10288): Preference change detected
2024-05-18 13:31:10 (10288): Setting CPU throttle for VM. (100%)
2024-05-18 13:31:10 (10288): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2024-05-18 13:41:57 (10288): Status Report: Elapsed Time: '6000.000000'
2024-05-18 13:41:57 (10288): Status Report: CPU Time: '25739.500000'
2024-05-18 13:57:11 (10288): Preference change detected
2024-05-18 13:57:11 (10288): Setting CPU throttle for VM. (100%)
2024-05-18 13:57:11 (10288): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2024-05-18 13:59:04 (10288): Guest Log:  *** Job finished ***
2024-05-18 13:59:04 (10288): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-05-18 13:59:04 (10288): Guest Log: 2024-05-18 11:58:50,839 | INFO     | [data] queue_monitor thread has finished
2024-05-18 13:59:04 (10288): Guest Log: 2024-05-18 11:58:55,081 | INFO     | job.realtimelogging is not enabled
2024-05-18 13:59:04 (10288): Guest Log: 2024-05-18 11:58:56,083 | INFO     | [payload] run_realtimelog thread has finished
2024-05-18 13:59:04 (10288): Guest Log: 2024-05-18 11:58:57,910 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139962247931712)>', '<ExcThread(monitor, started 139961198159616)>']
2024-05-18 13:59:04 (10288): Guest Log: 2024-05-18 11:58:58,602 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-05-18 13:59:04 (10288): Guest Log: 2024-05-18 11:58:58,602 | INFO     | [monitor] control thread has ended
2024-05-18 13:59:04 (10288): Guest Log: 2024-05-18 11:59:02,919 | INFO     | all workflow threads have been joined
2024-05-18 13:59:04 (10288): Guest Log: 2024-05-18 11:59:02,919 | INFO     | end of generic workflow (traces error code: 0)
2024-05-18 13:59:04 (10288): Guest Log: 2024-05-18 11:59:02,919 | INFO     | traces error code: 0
2024-05-18 13:59:04 (10288): Guest Log: 2024-05-18 11:59:02,919 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-05-18 13:59:04 (10288): Guest Log: 2024-05-18 11:59:03,004 [wrapper] ==== pilot stdout END ====
2024-05-18 13:59:04 (10288): Guest Log: 2024-05-18 11:59:03,007 [wrapper] ==== wrapper stdout RESUME ====
2024-05-18 13:59:04 (10288): Guest Log: 2024-05-18 11:59:03,010 [wrapper] pilotpid: 6481
2024-05-18 13:59:04 (10288): Guest Log: 2024-05-18 11:59:03,013 [wrapper] Pilot exit status: 0
2024-05-18 13:59:04 (10288): Guest Log: 2024-05-18 11:59:03,062 [wrapper] pandaids: 6208546456
2024-05-18 13:59:04 (10288): Guest Log: 2024-05-18 11:59:03,088 [wrapper] cleanup: SIGTERM to supervisor_pilot 18742 6482
2024-05-18 13:59:04 (10288): Guest Log: 2024-05-18 11:59:03,091 [wrapper] Test setup, not cleaning
2024-05-18 13:59:04 (10288): Guest Log: 2024-05-18 11:59:03,094 [wrapper] ==== wrapper stdout END ====
2024-05-18 13:59:04 (10288): Guest Log: 2024-05-18 11:59:03,097 [wrapper] ==== wrapper stderr END ====
2024-05-18 13:59:04 (10288): Guest Log: 2024-05-18 11:59:03,103 [wrapper] apfmon messages muted
2024-05-18 13:59:04 (10288): Guest Log:  *** Error codes and diagnostics ***
2024-05-18 13:59:04 (10288): Guest Log:     "exeErrorCode": 0,
2024-05-18 13:59:04 (10288): Guest Log:     "exeErrorDiag": "",
2024-05-18 13:59:04 (10288): Guest Log:     "pilotErrorCode": 0,
2024-05-18 13:59:04 (10288): Guest Log:     "pilotErrorDiag": "",
2024-05-18 13:59:04 (10288): Guest Log:  *** Listing of results directory ***
2024-05-18 13:59:04 (10288): Guest Log: total 232384
2024-05-18 13:59:04 (10288): Guest Log: -rw-r--r--. 1 atlas atlas    467845 May 18 04:42 pilot3.tar.gz
2024-05-18 13:59:04 (10288): Guest Log: -rw-r--r--. 1 atlas atlas      5633 May 18 04:58 queuedata.json
2024-05-18 13:59:04 (10288): Guest Log: -rwx------. 1 atlas atlas     32251 May 18 04:58 runpilot2-wrapper.sh
2024-05-18 13:59:04 (10288): Guest Log: -rwxr-xr-x. 1 atlas atlas      8961 May 18 10:02 init_data.xml
2024-05-18 13:59:04 (10288): Guest Log: -rwxr-xr-x. 1 atlas atlas    480002 May 18 10:02 input.tar.gz
2024-05-18 13:59:04 (10288): Guest Log: -rwxr-xr-x. 1 atlas atlas     17537 May 18 10:02 start_atlas.sh
2024-05-18 13:59:04 (10288): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 18 10:02 EVNT.38776100._000515.pool.root.1 -> /data/./ATLAS.root_0
2024-05-18 13:59:04 (10288): Guest Log: -rw-r--r--. 1 atlas atlas      2644 May 18 10:02 pandaJob.out
2024-05-18 13:59:04 (10288): Guest Log: -rw-------. 1 atlas atlas       424 May 18 10:02 setup.sh.local
2024-05-18 13:59:04 (10288): Guest Log: -rw-------. 1 atlas atlas   1019073 May 18 10:03 agis_schedconf.cvmfs.json
2024-05-18 13:59:04 (10288): Guest Log: -rw-------. 1 atlas atlas         0 May 18 10:03 agis_ddmendpoints.agis.ALL.json
2024-05-18 13:59:04 (10288): Guest Log: -rw-------. 1 atlas atlas   1324701 May 18 10:03 cric_ddmendpoints.json
2024-05-18 13:59:04 (10288): Guest Log: drwx------. 4 atlas atlas      4096 May 18 10:03 pilot3
2024-05-18 13:59:04 (10288): Guest Log: -rw-------. 1 atlas atlas 232818825 May 18 11:57 HITS.38776104._015788.pool.root.1
2024-05-18 13:59:04 (10288): Guest Log: -rw-------. 1 atlas atlas      1032 May 18 11:58 memory_monitor_summary.json
2024-05-18 13:59:04 (10288): Guest Log: -rw-------. 1 atlas atlas        95 May 18 11:58 pilot_heartbeat.json
2024-05-18 13:59:04 (10288): Guest Log: -rw-------. 1 atlas atlas    273633 May 18 11:58 log.38776104._015788.job.log.tgz.1
2024-05-18 13:59:04 (10288): Guest Log: -rw-------. 1 atlas atlas      7737 May 18 11:58 heartbeat.json
2024-05-18 13:59:04 (10288): Guest Log: -rw-------. 1 atlas atlas      4466 May 18 11:59 pilotlog.txt
2024-05-18 13:59:04 (10288): Guest Log: -rw-------. 1 atlas atlas    567490 May 18 11:59 log.38776104._015788.job.log.1
2024-05-18 13:59:04 (10288): Guest Log: -rw-------. 1 atlas atlas       357 May 18 11:59 output.list
2024-05-18 13:59:04 (10288): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 18 11:59 runtime_log
2024-05-18 13:59:04 (10288): Guest Log: -rw-------. 1 atlas atlas    860160 May 18 11:59 result.tar.gz
2024-05-18 13:59:04 (10288): Guest Log: -rw-------. 1 atlas atlas       649 May 18 11:59 wx7KDmyKRS5nsSi4apGgGQJmABFKDmABFKDm4ySLDms5RKDmhRtTDo.diag
2024-05-18 13:59:04 (10288): Guest Log: -rw-r--r--. 1 atlas atlas     10945 May 18 11:59 runtime_log.err
2024-05-18 13:59:04 (10288): Guest Log: Looking for outputfile HITS.38776104._015788.pool.root.1
2024-05-18 13:59:04 (10288): Guest Log: HITS file was successfully produced
2024-05-18 13:59:04 (10288): Guest Log: -rw-------. 1 atlas atlas 232818825 May 18 11:57 /home/atlas/RunAtlas/HITS.38776104._015788.pool.root.1
2024-05-18 13:59:05 (10288): Guest Log: Successfully finished the ATLAS job!
2024-05-18 13:59:05 (10288): Guest Log: Copying the results back to the shared directory!
2024-05-18 13:59:05 (10288): Guest Log:  *** Contents of shared directory: ***
2024-05-18 13:59:05 (10288): Guest Log: total 816452
2024-05-18 13:59:05 (10288): Guest Log: -rwxrwxrwx. 1 root root 601847056 May 18 10:01 ATLAS.root_0
2024-05-18 13:59:05 (10288): Guest Log: -rwxrwxrwx. 1 root root 232818825 May 18 11:59 HITS.pool.root.1
2024-05-18 13:59:05 (10288): Guest Log: -rwxrwxrwx. 1 root root      8961 May 18 10:01 init_data.xml
2024-05-18 13:59:05 (10288): Guest Log: -rwxrwxrwx. 1 root root    480002 May 18 09:21 input.tar.gz
2024-05-18 13:59:05 (10288): Guest Log: -rwxrwxrwx. 1 root root    860160 May 18 11:59 result.tar.gz
2024-05-18 13:59:05 (10288): Guest Log: -rwxrwxrwx. 1 root root     17537 May 18 09:21 start_atlas.sh
2024-05-18 13:59:05 (10288): Guest Log:  *** Success! Shutting down the machine. ***
2024-05-18 13:59:05 (10288): VM Completion File Detected.
2024-05-18 13:59:05 (10288): Powering off VM.
2024-05-18 13:59:05 (10288): Successfully stopped VM.
2024-05-18 13:59:05 (10288): Deregistering VM. (boinc_8ea6c47d7d95d2c5, slot#3)
2024-05-18 13:59:05 (10288): Removing network bandwidth throttle group from VM.
2024-05-18 13:59:06 (10288): Removing VM from VirtualBox.
2024-05-18 13:59:11 (10288): called boinc_finish(0)

</stderr_txt>
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