Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
03:36:25 (135470): wrapper (7.7.26015): starting
03:36:25 (135470): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 03:36:25] Arguments: --nthreads 12
[2024-05-18 03:36:25] Threads: 12
[2024-05-18 03:36:25] Checking for CVMFS
[2024-05-18 03:36:25] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 03:36:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 03:36:25] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 03:36:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 03:36:25] 2.10.1.0 209053 184804 193236 132876 0 68 43823775 45568000 11071 130560 0 1091727996 99.766 654207002 17037 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-05-18 03:36:25] CVMFS is ok
[2024-05-18 03:36:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 03:36:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 03:36:25] Further information can be found at the LHC@home message board.
[2024-05-18 03:36:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 03:36:25] Checking for apptainer binary...
[2024-05-18 03:36:25] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 03:36:25] Running /usr/bin/apptainer --version
[2024-05-18 03:36:26] apptainer version 1.1.8-1.el7
[2024-05-18 03:36:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 03:36:26] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0110.triumf.lcg
[2024-05-18 03:36:26] apptainer works
[2024-05-18 03:36:26] Set ATHENA_PROC_NUMBER=12
[2024-05-18 03:36:26] Set ATHENA_CORE_NUMBER=12
[2024-05-18 03:36:26] Starting ATLAS job with PandaID=6208493660
[2024-05-18 03:36:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 04:42:43]  *** The last 200 lines of the pilot log: ***
[2024-05-18 04:42:43]  filetype=log
[2024-05-18 04:42:43]  guid=be12daba-fbeb-4dd0-9941-a2d42c911056
[2024-05-18 04:42:43]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-18 04:42:43]  is_tar=False
[2024-05-18 04:42:43]  lfn=log.38776104._015404.job.log.tgz.1
[2024-05-18 04:42:43]  mtime=0
[2024-05-18 04:42:43]  protocol_id=None
[2024-05-18 04:42:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-18 04:42:43]  replicas=None
[2024-05-18 04:42:43]  scope=mc23_13p6TeV
[2024-05-18 04:42:43]  status=None
[2024-05-18 04:42:43]  status_code=0
[2024-05-18 04:42:43]  storage_token=
[2024-05-18 04:42:43]  surl=/home/boinc/slots/0/PanDA_Pilot-6208493660/log.38776104._015404.job.log.tgz.1
[2024-05-18 04:42:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/0e/log.38776104._015404.job.log.tgz.1
[2024-05-18 04:42:43]  workdir=None
[2024-05-18 04:42:43] ]
[2024-05-18 04:42:43] 2024-05-18 11:42:13,936 | INFO     | transferring file log.38776104._015404.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6208493660/log.38776104._015404.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-18 04:42:43] 2024-05-18 11:42:13,937 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6208493660/log.38776104._015404.job.log.tgz.1 /home/boinc/slots/0/log.38776104._015404.job.log.t
[2024-05-18 04:42:43] 2024-05-18 11:42:13,961 | INFO     | adding to output.list: log.38776104._015404.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/0e/log.38776104._015404.job.log.tg
[2024-05-18 04:42:43] 2024-05-18 11:42:13,962 | INFO     | summary of transferred files:
[2024-05-18 04:42:43] 2024-05-18 11:42:13,962 | INFO     |  -- lfn=log.38776104._015404.job.log.tgz.1, status_code=0, status=transferred
[2024-05-18 04:42:43] 2024-05-18 11:42:13,962 | INFO     | stage-out finished correctly
[2024-05-18 04:42:43] 2024-05-18 11:42:15,221 | INFO     | monitor loop #308: job 0:6208493660 is in state 'finished'
[2024-05-18 04:42:43] 2024-05-18 11:42:15,221 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 04:42:43] 2024-05-18 11:42:15,766 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-18 04:42:43] 2024-05-18 11:42:17,150 | INFO     | job 6208493660 has state=finished
[2024-05-18 04:42:43] 2024-05-18 11:42:17,150 | INFO     | preparing for final server update for job 6208493660 in state='finished'
[2024-05-18 04:42:43] 2024-05-18 11:42:17,151 | INFO     | this job has now completed (state=finished)
[2024-05-18 04:42:43] 2024-05-18 11:42:17,151 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-18 04:42:43] 2024-05-18 11:42:17,151 | INFO     | job 6208493660 has finished - writing final server update
[2024-05-18 04:42:43] 2024-05-18 11:42:17,151 | INFO     | total number of processed events: 400 (read)
[2024-05-18 04:42:43] 2024-05-18 11:42:17,156 | INFO     | executing command: lscpu
[2024-05-18 04:42:43] 2024-05-18 11:42:17,224 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-18 04:42:43] 2024-05-18 11:42:17,224 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 04:42:43] 2024-05-18 11:42:17,284 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 04:42:43] 2024-05-18 11:42:17,724 | INFO     | monitor loop #309: job 0:6208493660 is in state 'finished'
[2024-05-18 04:42:43] 2024-05-18 11:42:17,725 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 04:42:43] 2024-05-18 11:42:20,227 | INFO     | monitor loop #310: job 0:6208493660 is in state 'finished'
[2024-05-18 04:42:43] 2024-05-18 11:42:20,227 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 04:42:43] 2024-05-18 11:42:21,449 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-18 04:42:43] 2024-05-18 11:42:21,449 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6208493660/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 04:42:43] 2024-05-18 11:42:21,451 | INFO     | extracted standard info from prmon json
[2024-05-18 04:42:43] 2024-05-18 11:42:21,451 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 04:42:43] 2024-05-18 11:42:21,451 | WARNING  | GPU info not found in prmon json
[2024-05-18 04:42:43] 2024-05-18 11:42:21,451 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 04:42:43] 2024-05-18 11:42:21,451 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 04:42:43] 2024-05-18 11:42:21,453 | INFO     | fitting pss+swap vs Time
[2024-05-18 04:42:43] 2024-05-18 11:42:21,453 | INFO     | model: linear, x: [1716028928.0, 1716028989.0, 1716029050.0, 1716029111.0, 1716029172.0, 1716029233.0, 1716029294.0, 1716029355.0, 1716029416.0, 1716029477.0, 1716
[2024-05-18 04:42:43] 2024-05-18 11:42:21,453 | INFO     | sum of square deviations: 60482994.5
[2024-05-18 04:42:43] 2024-05-18 11:42:21,454 | INFO     | sum of deviations: 16687051389.500002
[2024-05-18 04:42:43] 2024-05-18 11:42:21,454 | INFO     | mean x: 1716030666.5
[2024-05-18 04:42:43] 2024-05-18 11:42:21,454 | INFO     | mean y: 2636429.0172413792
[2024-05-18 04:42:43] 2024-05-18 11:42:21,454 | INFO     | -- intersect: -473444357301.484
[2024-05-18 04:42:43] 2024-05-18 11:42:21,454 | INFO     | intersect: -473444357301.484
[2024-05-18 04:42:43] 2024-05-18 11:42:21,454 | INFO     | chi2: 2.3734829097559564
[2024-05-18 04:42:43] 2024-05-18 11:42:21,454 | INFO     | -- intersect: -473444357301.484
[2024-05-18 04:42:43] 2024-05-18 11:42:21,455 | INFO     | current memory leak: 275.90 B/s (using 58 data points, chi2=2.37)
[2024-05-18 04:42:43] 2024-05-18 11:42:21,455 | INFO     | ..............................
[2024-05-18 04:42:43] 2024-05-18 11:42:21,455 | INFO     | . Timing measurements:
[2024-05-18 04:42:43] 2024-05-18 11:42:21,455 | INFO     | . get job = 0 s
[2024-05-18 04:42:43] 2024-05-18 11:42:21,455 | INFO     | . initial setup = 2 s
[2024-05-18 04:42:43] 2024-05-18 11:42:21,456 | INFO     | . payload setup = 5 s
[2024-05-18 04:42:43] 2024-05-18 11:42:21,456 | INFO     | . stage-in = 0 s
[2024-05-18 04:42:43] 2024-05-18 11:42:21,456 | INFO     | . payload execution = 3909 s
[2024-05-18 04:42:43] 2024-05-18 11:42:21,456 | INFO     | . stage-out = 0 s
[2024-05-18 04:42:43] 2024-05-18 11:42:21,456 | INFO     | . log creation = 0 s
[2024-05-18 04:42:43] 2024-05-18 11:42:21,456 | INFO     | ..............................
[2024-05-18 04:42:43] 2024-05-18 11:42:21,532 | INFO     | 
[2024-05-18 04:42:43] 2024-05-18 11:42:21,532 | INFO     | job summary report
[2024-05-18 04:42:43] 2024-05-18 11:42:21,532 | INFO     | --------------------------------------------------
[2024-05-18 04:42:43] 2024-05-18 11:42:21,532 | INFO     | PanDA job id: 6208493660
[2024-05-18 04:42:43] 2024-05-18 11:42:21,532 | INFO     | task id: 38776104
[2024-05-18 04:42:43] 2024-05-18 11:42:21,532 | INFO     | errors: (none)
[2024-05-18 04:42:43] 2024-05-18 11:42:21,533 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 04:42:43] 2024-05-18 11:42:21,533 | INFO     | pilot state: finished 
[2024-05-18 04:42:43] 2024-05-18 11:42:21,533 | INFO     | transexitcode: 0
[2024-05-18 04:42:43] 2024-05-18 11:42:21,533 | INFO     | exeerrorcode: 0
[2024-05-18 04:42:43] 2024-05-18 11:42:21,533 | INFO     | exeerrordiag: 
[2024-05-18 04:42:43] 2024-05-18 11:42:21,533 | INFO     | exitcode: 0
[2024-05-18 04:42:43] 2024-05-18 11:42:21,533 | INFO     | exitmsg: OK
[2024-05-18 04:42:43] 2024-05-18 11:42:21,533 | INFO     | cpuconsumptiontime: 34886 s
[2024-05-18 04:42:43] 2024-05-18 11:42:21,533 | INFO     | nevents: 400
[2024-05-18 04:42:43] 2024-05-18 11:42:21,533 | INFO     | neventsw: 0
[2024-05-18 04:42:43] 2024-05-18 11:42:21,533 | INFO     | pid: 146210
[2024-05-18 04:42:43] 2024-05-18 11:42:21,533 | INFO     | pgrp: 146210
[2024-05-18 04:42:43] 2024-05-18 11:42:21,533 | INFO     | corecount: 12
[2024-05-18 04:42:43] 2024-05-18 11:42:21,533 | INFO     | event service: False
[2024-05-18 04:42:43] 2024-05-18 11:42:21,533 | INFO     | sizes: {0: 2392200, 5: 2392406, 11: 2392462, 3919: 2418244, 3921: 2427198, 3922: 2427254, 3928: 2427552}
[2024-05-18 04:42:43] 2024-05-18 11:42:21,533 | INFO     | --------------------------------------------------
[2024-05-18 04:42:43] 2024-05-18 11:42:21,533 | INFO     | 
[2024-05-18 04:42:43] 2024-05-18 11:42:21,534 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 04:42:43] 2024-05-18 11:42:21,556 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 04:42:43] 2024-05-18 11:42:21,557 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 04:42:43] 2024-05-18 11:42:21,557 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 04:42:43] 2024-05-18 11:42:21,557 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 04:42:43] 2024-05-18 11:42:21,557 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 04:42:43] 2024-05-18 11:42:21,557 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 04:42:43] 2024-05-18 11:42:21,557 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 04:42:43] 2024-05-18 11:42:21,557 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 04:42:43] 2024-05-18 11:42:21,558 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 04:42:43] 2024-05-18 11:42:21,558 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 04:42:43] 2024-05-18 11:42:21,558 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 04:42:43] 2024-05-18 11:42:21,558 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 04:42:43] 2024-05-18 11:42:21,558 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 04:42:43] 2024-05-18 11:42:21,558 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 04:42:43] 2024-05-18 11:42:21,558 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 04:42:43] 2024-05-18 11:42:21,558 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 04:42:43] 2024-05-18 11:42:21,558 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 04:42:43] 2024-05-18 11:42:21,558 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 04:42:43] 2024-05-18 11:42:21,559 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 04:42:43] 2024-05-18 11:42:21,559 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 04:42:43] 2024-05-18 11:42:21,559 | INFO     | job 6208493660 has completed (purged errors)
[2024-05-18 04:42:43] 2024-05-18 11:42:21,559 | INFO     | overall cleanup function is called
[2024-05-18 04:42:43] 2024-05-18 11:42:22,567 | INFO     | --- collectZombieJob: --- 10, [146210]
[2024-05-18 04:42:43] 2024-05-18 11:42:22,568 | INFO     | zombie collector waiting for pid 146210
[2024-05-18 04:42:43] 2024-05-18 11:42:22,568 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 04:42:43] 2024-05-18 11:42:23,571 | INFO     | collected zombie processes
[2024-05-18 04:42:43] 2024-05-18 11:42:23,571 | INFO     | will now attempt to kill all subprocesses of pid=146210
[2024-05-18 04:42:43] 2024-05-18 11:42:23,767 | INFO     | process IDs to be killed: [146210] (in reverse order)
[2024-05-18 04:42:43] 2024-05-18 11:42:23,897 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 04:42:43] 2024-05-18 11:42:23,897 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 04:42:43] 2024-05-18 11:42:23,904 | INFO     | did not find any defunct processes belonging to 146210
[2024-05-18 04:42:43] 2024-05-18 11:42:23,913 | INFO     | did not find any defunct processes belonging to 146210
[2024-05-18 04:42:43] 2024-05-18 11:42:23,914 | INFO     | ready for new job
[2024-05-18 04:42:43] 2024-05-18 11:42:23,914 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 04:42:43] 2024-05-18 11:42:23,916 | INFO     | *************************************
[2024-05-18 04:42:43] 2024-05-18 11:42:23,916 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 04:42:43] 2024-05-18 11:42:23,916 | INFO     | *************************************
[2024-05-18 04:42:43] 2024-05-18 11:42:23,917 | INFO     | 
[2024-05-18 04:42:43] 2024-05-18 11:42:23,922 | INFO     | architecture information:
[2024-05-18 04:42:43] 2024-05-18 11:42:23,922 | INFO     | executing command: cat /etc/os-release
[2024-05-18 04:42:43] 2024-05-18 11:42:23,948 | INFO     | cat /etc/os-release:
[2024-05-18 04:42:43] NAME="CentOS Linux"
[2024-05-18 04:42:43] VERSION="7 (Core)"
[2024-05-18 04:42:43] ID="centos"
[2024-05-18 04:42:43] ID_LIKE="rhel fedora"
[2024-05-18 04:42:43] VERSION_ID="7"
[2024-05-18 04:42:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 04:42:43] ANSI_COLOR="0;31"
[2024-05-18 04:42:43] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 04:42:43] HOME_URL="https://www.centos.org/"
[2024-05-18 04:42:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 04:42:43] 
[2024-05-18 04:42:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 04:42:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 04:42:43] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 04:42:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 04:42:43] 
[2024-05-18 04:42:43] 2024-05-18 11:42:23,949 | INFO     | *************************************
[2024-05-18 04:42:43] 2024-05-18 11:42:24,452 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 04:42:43] 2024-05-18 11:42:24,478 | INFO     | sufficient remaining disk space (1987043131392 B)
[2024-05-18 04:42:43] 2024-05-18 11:42:24,479 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 04:42:43] 2024-05-18 11:42:24,479 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 04:42:43] 2024-05-18 11:42:24,479 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-18 04:42:43] 2024-05-18 11:42:24,480 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 04:42:43] 2024-05-18 11:42:24,480 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 04:42:43] 2024-05-18 11:42:24,481 | INFO     | aborting loop
[2024-05-18 04:42:43] 2024-05-18 11:42:24,481 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 04:42:43] 2024-05-18 11:42:24,481 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 04:42:43] 2024-05-18 11:42:24,542 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 04:42:43] 2024-05-18 11:42:24,983 | INFO     | all payload control threads have been joined
[2024-05-18 04:42:43] 2024-05-18 11:42:25,118 | INFO     | all data control threads have been joined
[2024-05-18 04:42:43] 2024-05-18 11:42:25,284 | INFO     | all job control threads have been joined
[2024-05-18 04:42:43] 2024-05-18 11:42:25,482 | INFO     | [job] job monitor thread has finished
[2024-05-18 04:42:43] 2024-05-18 11:42:25,485 | INFO     | [job] retrieve thread has finished
[2024-05-18 04:42:43] 2024-05-18 11:42:25,777 | INFO     | [payload] validate_post thread has finished
[2024-05-18 04:42:43] 2024-05-18 11:42:25,986 | INFO     | [payload] control thread has finished
[2024-05-18 04:42:43] 2024-05-18 11:42:26,122 | INFO     | [data] control thread has finished
[2024-05-18 04:42:43] 2024-05-18 11:42:26,163 | INFO     | [job] validate thread has finished
[2024-05-18 04:42:43] 2024-05-18 11:42:26,289 | INFO     | [job] control thread has finished
[2024-05-18 04:42:43] 2024-05-18 11:42:26,338 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 04:42:43] 2024-05-18 11:42:26,362 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 04:42:43] 2024-05-18 11:42:26,418 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 04:42:43] 2024-05-18 11:42:26,490 | INFO     | [data] copytool_in thread has finished
[2024-05-18 04:42:43] 2024-05-18 11:42:26,543 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 04:42:43] 2024-05-18 11:42:26,544 | INFO     | [data] copytool_out thread has finished
[2024-05-18 04:42:43] 2024-05-18 11:42:26,711 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 04:42:43] 2024-05-18 11:42:26,759 | INFO     | [payload] failed_post thread has finished
[2024-05-18 04:42:43] 2024-05-18 11:42:27,547 | INFO     | [job] queue monitor thread has finished
[2024-05-18 04:42:43] 2024-05-18 11:42:30,344 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 04:42:43] 2024-05-18 11:42:35,194 | INFO     | job.realtimelogging is not enabled
[2024-05-18 04:42:43] 2024-05-18 11:42:36,195 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 04:42:43] 2024-05-18 11:42:37,940 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140550913836864)>', '<ExcThread(monitor, started 140550481094400)>']
[2024-05-18 04:42:43] 2024-05-18 11:42:38,549 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 04:42:43] 2024-05-18 11:42:38,550 | INFO     | [monitor] control thread has ended
[2024-05-18 04:42:43] 2024-05-18 11:42:42,965 | INFO     | all workflow threads have been joined
[2024-05-18 04:42:43] 2024-05-18 11:42:42,966 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 04:42:43] 2024-05-18 11:42:42,966 | INFO     | traces error code: 0
[2024-05-18 04:42:43] 2024-05-18 11:42:42,966 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 04:42:43] 2024-05-18 11:42:43,060 [wrapper] ==== pilot stdout END ====
[2024-05-18 04:42:43] 2024-05-18 11:42:43,064 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 04:42:43] 2024-05-18 11:42:43,067 [wrapper] pilotpid: 139694
[2024-05-18 04:42:43] 2024-05-18 11:42:43,070 [wrapper] Pilot exit status: 0
[2024-05-18 04:42:43] 2024-05-18 11:42:43,083 [wrapper] pandaids: 6208493660
[2024-05-18 04:42:43] 2024-05-18 11:42:43,160 [wrapper] cleanup: SIGTERM to supervisor_pilot 108401 139695
[2024-05-18 04:42:43] 2024-05-18 11:42:43,165 [wrapper] Test setup, not cleaning
[2024-05-18 04:42:43] 2024-05-18 11:42:43,169 [wrapper] ==== wrapper stdout END ====
[2024-05-18 04:42:43] 2024-05-18 11:42:43,173 [wrapper] ==== wrapper stderr END ====
[2024-05-18 04:42:43] 2024-05-18 11:42:43,180 [wrapper] apfmon messages muted
[2024-05-18 04:42:43]  *** Error codes and diagnostics ***
[2024-05-18 04:42:43]     "exeErrorCode": 0,
[2024-05-18 04:42:43]     "exeErrorDiag": "",
[2024-05-18 04:42:43]     "pilotErrorCode": 0,
[2024-05-18 04:42:43]     "pilotErrorDiag": "",
[2024-05-18 04:42:43]  *** Listing of results directory ***
[2024-05-18 04:42:43] total 818712
[2024-05-18 04:42:43] -rw-r--r-- 1 boinc boinc    467845 May 17 20:38 pilot3.tar.gz
[2024-05-18 04:42:43] -rw-r--r-- 1 boinc boinc      5633 May 17 20:53 queuedata.json
[2024-05-18 04:42:43] -rwx------ 1 boinc boinc     32251 May 17 20:54 runpilot2-wrapper.sh
[2024-05-18 04:42:43] -rw-r--r-- 1 boinc boinc       100 May 18 03:36 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 04:42:43] -rwxr-xr-x 1 boinc boinc      7986 May 18 03:36 run_atlas
[2024-05-18 04:42:43] -rw-r--r-- 1 boinc boinc       105 May 18 03:36 job.xml
[2024-05-18 04:42:43] -rw-r--r-- 2 boinc boinc 601726338 May 18 03:36 EVNT.38776100._000286.pool.root.1
[2024-05-18 04:42:43] -rw-r--r-- 2 boinc boinc     17537 May 18 03:36 start_atlas.sh
[2024-05-18 04:42:43] drwxrwx--x 2 boinc boinc      4096 May 18 03:36 shared
[2024-05-18 04:42:43] -rw-r--r-- 2 boinc boinc    480008 May 18 03:36 input.tar.gz
[2024-05-18 04:42:43] -rw-r--r-- 1 boinc boinc      6622 May 18 03:36 init_data.xml
[2024-05-18 04:42:43] -rw-r--r-- 1 boinc boinc         0 May 18 03:36 boinc_lockfile
[2024-05-18 04:42:43] -rw-r--r-- 1 boinc boinc      2642 May 18 03:36 pandaJob.out
[2024-05-18 04:42:43] -rw------- 1 boinc boinc       424 May 18 03:36 setup.sh.local
[2024-05-18 04:42:43] -rw------- 1 boinc boinc   1019073 May 18 03:36 agis_schedconf.cvmfs.json
[2024-05-18 04:42:43] -rw------- 1 boinc boinc         0 May 18 03:36 agis_ddmendpoints.agis.ALL.json
[2024-05-18 04:42:43] -rw------- 1 boinc boinc   1324701 May 18 03:36 cric_ddmendpoints.json
[2024-05-18 04:42:43] drwx------ 4 boinc boinc      4096 May 18 03:36 pilot3
[2024-05-18 04:42:43] -rw------- 1 boinc boinc 231587573 May 18 04:41 HITS.38776104._015404.pool.root.1
[2024-05-18 04:42:43] -rw-r--r-- 1 boinc boinc       531 May 18 04:41 boinc_task_state.xml
[2024-05-18 04:42:43] -rw------- 1 boinc boinc        95 May 18 04:41 pilot_heartbeat.json
[2024-05-18 04:42:43] -rw------- 1 boinc boinc      1059 May 18 04:42 memory_monitor_summary.json
[2024-05-18 04:42:43] -rw------- 1 boinc boinc    357009 May 18 04:42 log.38776104._015404.job.log.tgz.1
[2024-05-18 04:42:43] -rw-r--r-- 1 boinc boinc        27 May 18 04:42 wrapper_checkpoint.txt
[2024-05-18 04:42:43] -rw-r--r-- 1 boinc boinc      8192 May 18 04:42 boinc_mmap_file
[2024-05-18 04:42:43] -rw------- 1 boinc boinc      7775 May 18 04:42 heartbeat.json
[2024-05-18 04:42:43] -rw------- 1 boinc boinc      4405 May 18 04:42 pilotlog.txt
[2024-05-18 04:42:43] -rw------- 1 boinc boinc    398359 May 18 04:42 log.38776104._015404.job.log.1
[2024-05-18 04:42:43] -rw------- 1 boinc boinc       357 May 18 04:42 output.list
[2024-05-18 04:42:43] -rw-r--r-- 1 boinc boinc       620 May 18 04:42 runtime_log
[2024-05-18 04:42:43] -rw------- 1 boinc boinc    778240 May 18 04:42 result.tar.gz
[2024-05-18 04:42:43] -rw------- 1 boinc boinc       651 May 18 04:42 xeKODmTKQS5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmGhLKDmGiW4Jn.diag
[2024-05-18 04:42:43] -rw-r--r-- 1 boinc boinc     11286 May 18 04:42 runtime_log.err
[2024-05-18 04:42:43] -rw-r--r-- 1 boinc boinc     21717 May 18 04:42 stderr.txt
[2024-05-18 04:42:44] HITS file was successfully produced:
[2024-05-18 04:42:44] -rw------- 1 boinc boinc 231587573 May 18 04:41 shared/HITS.pool.root.1
[2024-05-18 04:42:44]  *** Contents of shared directory: ***
[2024-05-18 04:42:44] total 815044
[2024-05-18 04:42:44] -rw-r--r-- 2 boinc boinc 601726338 May 18 03:36 ATLAS.root_0
[2024-05-18 04:42:44] -rw-r--r-- 2 boinc boinc     17537 May 18 03:36 start_atlas.sh
[2024-05-18 04:42:44] -rw-r--r-- 2 boinc boinc    480008 May 18 03:36 input.tar.gz
[2024-05-18 04:42:44] -rw------- 1 boinc boinc 231587573 May 18 04:41 HITS.pool.root.1
[2024-05-18 04:42:44] -rw------- 1 boinc boinc    778240 May 18 04:42 result.tar.gz
04:42:45 (135470): run_atlas exited; CPU time 34735.023744
04:42:45 (135470): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN