Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
10:24:58 (130805): wrapper (7.7.26015): starting
10:24:58 (130805): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 10:24:58] Arguments: --nthreads 12
[2024-05-18 10:24:58] Threads: 12
[2024-05-18 10:24:58] Checking for CVMFS
[2024-05-18 10:24:58] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 10:24:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 10:24:58] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 10:24:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 10:24:58] 2.10.1.0 61339 185212 152488 132886 3 201 32891080 45568000 8827 130560 0 1063484097 99.775 607916373 15883 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-05-18 10:24:58] CVMFS is ok
[2024-05-18 10:24:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 10:24:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 10:24:59] Further information can be found at the LHC@home message board.
[2024-05-18 10:24:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 10:24:59] Checking for apptainer binary...
[2024-05-18 10:24:59] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 10:24:59] Running /usr/bin/apptainer --version
[2024-05-18 10:24:59] apptainer version 1.1.8-1.el7
[2024-05-18 10:24:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 10:25:00] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0152.triumf.lcg
[2024-05-18 10:25:00] apptainer works
[2024-05-18 10:25:00] Set ATHENA_PROC_NUMBER=12
[2024-05-18 10:25:00] Set ATHENA_CORE_NUMBER=12
[2024-05-18 10:25:00] Starting ATLAS job with PandaID=6208492990
[2024-05-18 10:25:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 11:42:01]  *** The last 200 lines of the pilot log: ***
[2024-05-18 11:42:01]  guid=025fb208-a410-41d6-a751-ff1f4179355e
[2024-05-18 11:42:01]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-18 11:42:01]  is_tar=False
[2024-05-18 11:42:01]  lfn=log.38776125._015803.job.log.tgz.1
[2024-05-18 11:42:01]  mtime=0
[2024-05-18 11:42:01]  protocol_id=None
[2024-05-18 11:42:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-18 11:42:01]  replicas=None
[2024-05-18 11:42:01]  scope=mc23_13p6TeV
[2024-05-18 11:42:01]  status=None
[2024-05-18 11:42:01]  status_code=0
[2024-05-18 11:42:01]  storage_token=
[2024-05-18 11:42:01]  surl=/home/boinc/slots/0/PanDA_Pilot-6208492990/log.38776125._015803.job.log.tgz.1
[2024-05-18 11:42:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/06/06/log.38776125._015803.job.log.tgz.1
[2024-05-18 11:42:01]  workdir=None
[2024-05-18 11:42:01] ]
[2024-05-18 11:42:01] 2024-05-18 18:41:36,499 | INFO     | transferring file log.38776125._015803.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6208492990/log.38776125._015803.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-18 11:42:01] 2024-05-18 18:41:36,499 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6208492990/log.38776125._015803.job.log.tgz.1 /home/boinc/slots/0/log.38776125._015803.job.log.t
[2024-05-18 11:42:01] 2024-05-18 18:41:36,525 | INFO     | adding to output.list: log.38776125._015803.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/06/06/log.38776125._015803.job.log.tg
[2024-05-18 11:42:01] 2024-05-18 18:41:36,526 | INFO     | summary of transferred files:
[2024-05-18 11:42:01] 2024-05-18 18:41:36,526 | INFO     |  -- lfn=log.38776125._015803.job.log.tgz.1, status_code=0, status=transferred
[2024-05-18 11:42:01] 2024-05-18 18:41:36,526 | INFO     | stage-out finished correctly
[2024-05-18 11:42:01] 2024-05-18 18:41:36,837 | WARNING  | process 141514 is no longer using CPU - aborting
[2024-05-18 11:42:01] 2024-05-18 18:41:36,837 | INFO     | will not send any job update
[2024-05-18 11:42:01] 2024-05-18 18:41:39,340 | INFO     | monitor loop #356: job 0:6208492990 is in state 'finished'
[2024-05-18 11:42:01] 2024-05-18 18:41:39,340 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 11:42:01] 2024-05-18 18:41:39,946 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-18 11:42:01] 2024-05-18 18:41:41,843 | INFO     | monitor loop #357: job 0:6208492990 is in state 'finished'
[2024-05-18 11:42:01] 2024-05-18 18:41:41,843 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 11:42:01] 2024-05-18 18:41:42,511 | INFO     | job 6208492990 has state=finished
[2024-05-18 11:42:01] 2024-05-18 18:41:42,511 | INFO     | preparing for final server update for job 6208492990 in state='finished'
[2024-05-18 11:42:01] 2024-05-18 18:41:42,512 | INFO     | this job has now completed (state=finished)
[2024-05-18 11:42:01] 2024-05-18 18:41:42,512 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-18 11:42:01] 2024-05-18 18:41:42,512 | INFO     | job 6208492990 has finished - writing final server update
[2024-05-18 11:42:01] 2024-05-18 18:41:42,513 | INFO     | total number of processed events: 400 (read)
[2024-05-18 11:42:01] 2024-05-18 18:41:42,517 | INFO     | executing command: lscpu
[2024-05-18 11:42:01] 2024-05-18 18:41:42,585 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-18 11:42:01] 2024-05-18 18:41:42,586 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 11:42:01] 2024-05-18 18:41:42,642 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 11:42:01] 2024-05-18 18:41:44,346 | INFO     | monitor loop #358: job 0:6208492990 is in state 'finished'
[2024-05-18 11:42:01] 2024-05-18 18:41:44,346 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 11:42:01] 2024-05-18 18:41:46,446 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-18 11:42:01] 2024-05-18 18:41:46,446 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6208492990/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 11:42:01] 2024-05-18 18:41:46,447 | INFO     | extracted standard info from prmon json
[2024-05-18 11:42:01] 2024-05-18 18:41:46,447 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 11:42:01] 2024-05-18 18:41:46,447 | WARNING  | GPU info not found in prmon json
[2024-05-18 11:42:01] 2024-05-18 18:41:46,448 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 11:42:01] 2024-05-18 18:41:46,448 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 11:42:01] 2024-05-18 18:41:46,449 | INFO     | fitting pss+swap vs Time
[2024-05-18 11:42:01] 2024-05-18 18:41:46,449 | INFO     | model: linear, x: [1716053441.0, 1716053502.0, 1716053563.0, 1716053624.0, 1716053685.0, 1716053746.0, 1716053807.0, 1716053868.0, 1716053929.0, 1716053990.0, 1716
[2024-05-18 11:42:01] 2024-05-18 18:41:46,450 | INFO     | sum of square deviations: 97479037.0
[2024-05-18 11:42:01] 2024-05-18 18:41:46,450 | INFO     | sum of deviations: 19155530307.000004
[2024-05-18 11:42:01] 2024-05-18 18:41:46,450 | INFO     | mean x: 1716055484.5
[2024-05-18 11:42:01] 2024-05-18 18:41:46,450 | INFO     | mean y: 2689204.029411765
[2024-05-18 11:42:01] 2024-05-18 18:41:46,450 | INFO     | -- intersect: -337218049259.2909
[2024-05-18 11:42:01] 2024-05-18 18:41:46,450 | INFO     | intersect: -337218049259.2909
[2024-05-18 11:42:01] 2024-05-18 18:41:46,450 | INFO     | chi2: 2.4948215797065636
[2024-05-18 11:42:01] 2024-05-18 18:41:46,450 | INFO     | -- intersect: -337218049259.2909
[2024-05-18 11:42:01] 2024-05-18 18:41:46,450 | INFO     | current memory leak: 196.51 B/s (using 68 data points, chi2=2.49)
[2024-05-18 11:42:01] 2024-05-18 18:41:46,451 | INFO     | ..............................
[2024-05-18 11:42:01] 2024-05-18 18:41:46,451 | INFO     | . Timing measurements:
[2024-05-18 11:42:01] 2024-05-18 18:41:46,451 | INFO     | . get job = 0 s
[2024-05-18 11:42:01] 2024-05-18 18:41:46,451 | INFO     | . initial setup = 2 s
[2024-05-18 11:42:01] 2024-05-18 18:41:46,451 | INFO     | . payload setup = 5 s
[2024-05-18 11:42:01] 2024-05-18 18:41:46,451 | INFO     | . stage-in = 0 s
[2024-05-18 11:42:01] 2024-05-18 18:41:46,451 | INFO     | . payload execution = 4559 s
[2024-05-18 11:42:01] 2024-05-18 18:41:46,451 | INFO     | . stage-out = 0 s
[2024-05-18 11:42:01] 2024-05-18 18:41:46,451 | INFO     | . log creation = 0 s
[2024-05-18 11:42:01] 2024-05-18 18:41:46,451 | INFO     | ..............................
[2024-05-18 11:42:01] 2024-05-18 18:41:46,518 | INFO     | 
[2024-05-18 11:42:01] 2024-05-18 18:41:46,519 | INFO     | job summary report
[2024-05-18 11:42:01] 2024-05-18 18:41:46,519 | INFO     | --------------------------------------------------
[2024-05-18 11:42:01] 2024-05-18 18:41:46,519 | INFO     | PanDA job id: 6208492990
[2024-05-18 11:42:01] 2024-05-18 18:41:46,519 | INFO     | task id: 38776125
[2024-05-18 11:42:01] 2024-05-18 18:41:46,519 | INFO     | errors: (none)
[2024-05-18 11:42:01] 2024-05-18 18:41:46,519 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 11:42:01] 2024-05-18 18:41:46,519 | INFO     | pilot state: finished 
[2024-05-18 11:42:01] 2024-05-18 18:41:46,519 | INFO     | transexitcode: 0
[2024-05-18 11:42:01] 2024-05-18 18:41:46,519 | INFO     | exeerrorcode: 0
[2024-05-18 11:42:01] 2024-05-18 18:41:46,520 | INFO     | exeerrordiag: 
[2024-05-18 11:42:01] 2024-05-18 18:41:46,520 | INFO     | exitcode: 0
[2024-05-18 11:42:01] 2024-05-18 18:41:46,520 | INFO     | exitmsg: OK
[2024-05-18 11:42:01] 2024-05-18 18:41:46,520 | INFO     | cpuconsumptiontime: 41432 s
[2024-05-18 11:42:01] 2024-05-18 18:41:46,520 | INFO     | nevents: 400
[2024-05-18 11:42:01] 2024-05-18 18:41:46,520 | INFO     | neventsw: 0
[2024-05-18 11:42:01] 2024-05-18 18:41:46,520 | INFO     | pid: 141514
[2024-05-18 11:42:01] 2024-05-18 18:41:46,520 | INFO     | pgrp: 141514
[2024-05-18 11:42:01] 2024-05-18 18:41:46,520 | INFO     | corecount: 12
[2024-05-18 11:42:01] 2024-05-18 18:41:46,520 | INFO     | event service: False
[2024-05-18 11:42:01] 2024-05-18 18:41:46,520 | INFO     | sizes: {0: 2392195, 4: 2392401, 11: 2392429, 4568: 2418557, 4570: 2427511, 4574: 2427567, 4580: 2427865}
[2024-05-18 11:42:01] 2024-05-18 18:41:46,521 | INFO     | --------------------------------------------------
[2024-05-18 11:42:01] 2024-05-18 18:41:46,521 | INFO     | 
[2024-05-18 11:42:01] 2024-05-18 18:41:46,521 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 11:42:01] 2024-05-18 18:41:46,548 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 11:42:01] 2024-05-18 18:41:46,548 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 11:42:01] 2024-05-18 18:41:46,548 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 11:42:01] 2024-05-18 18:41:46,548 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 11:42:01] 2024-05-18 18:41:46,549 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 11:42:01] 2024-05-18 18:41:46,549 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 11:42:01] 2024-05-18 18:41:46,549 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 11:42:01] 2024-05-18 18:41:46,549 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 11:42:01] 2024-05-18 18:41:46,549 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 11:42:01] 2024-05-18 18:41:46,549 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 11:42:01] 2024-05-18 18:41:46,549 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 11:42:01] 2024-05-18 18:41:46,549 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 11:42:01] 2024-05-18 18:41:46,549 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 11:42:01] 2024-05-18 18:41:46,549 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 11:42:01] 2024-05-18 18:41:46,549 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 11:42:01] 2024-05-18 18:41:46,550 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 11:42:01] 2024-05-18 18:41:46,550 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 11:42:01] 2024-05-18 18:41:46,550 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 11:42:01] 2024-05-18 18:41:46,550 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 11:42:01] 2024-05-18 18:41:46,550 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 11:42:01] 2024-05-18 18:41:46,550 | INFO     | job 6208492990 has completed (purged errors)
[2024-05-18 11:42:01] 2024-05-18 18:41:46,550 | INFO     | overall cleanup function is called
[2024-05-18 11:42:01] 2024-05-18 18:41:47,559 | INFO     | --- collectZombieJob: --- 10, [141514]
[2024-05-18 11:42:01] 2024-05-18 18:41:47,559 | INFO     | zombie collector waiting for pid 141514
[2024-05-18 11:42:01] 2024-05-18 18:41:47,559 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 11:42:01] 2024-05-18 18:41:48,565 | INFO     | collected zombie processes
[2024-05-18 11:42:01] 2024-05-18 18:41:48,565 | INFO     | will now attempt to kill all subprocesses of pid=141514
[2024-05-18 11:42:01] 2024-05-18 18:41:48,761 | INFO     | process IDs to be killed: [141514] (in reverse order)
[2024-05-18 11:42:01] 2024-05-18 18:41:48,889 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 11:42:01] 2024-05-18 18:41:48,890 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 11:42:01] 2024-05-18 18:41:48,901 | INFO     | did not find any defunct processes belonging to 141514
[2024-05-18 11:42:01] 2024-05-18 18:41:48,911 | INFO     | did not find any defunct processes belonging to 141514
[2024-05-18 11:42:01] 2024-05-18 18:41:48,912 | INFO     | ready for new job
[2024-05-18 11:42:01] 2024-05-18 18:41:48,912 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 11:42:01] 2024-05-18 18:41:48,914 | INFO     | *************************************
[2024-05-18 11:42:01] 2024-05-18 18:41:48,914 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 11:42:01] 2024-05-18 18:41:48,914 | INFO     | *************************************
[2024-05-18 11:42:01] 2024-05-18 18:41:48,914 | INFO     | 
[2024-05-18 11:42:01] 2024-05-18 18:41:48,918 | INFO     | architecture information:
[2024-05-18 11:42:01] 2024-05-18 18:41:48,919 | INFO     | executing command: cat /etc/os-release
[2024-05-18 11:42:01] 2024-05-18 18:41:48,937 | INFO     | cat /etc/os-release:
[2024-05-18 11:42:01] NAME="CentOS Linux"
[2024-05-18 11:42:01] VERSION="7 (Core)"
[2024-05-18 11:42:01] ID="centos"
[2024-05-18 11:42:01] ID_LIKE="rhel fedora"
[2024-05-18 11:42:01] VERSION_ID="7"
[2024-05-18 11:42:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 11:42:01] ANSI_COLOR="0;31"
[2024-05-18 11:42:01] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 11:42:01] HOME_URL="https://www.centos.org/"
[2024-05-18 11:42:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 11:42:01] 
[2024-05-18 11:42:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 11:42:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 11:42:01] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 11:42:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 11:42:01] 
[2024-05-18 11:42:01] 2024-05-18 18:41:48,937 | INFO     | *************************************
[2024-05-18 11:42:01] 2024-05-18 18:41:49,441 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 11:42:01] 2024-05-18 18:41:49,464 | INFO     | sufficient remaining disk space (2221027622912 B)
[2024-05-18 11:42:01] 2024-05-18 18:41:49,465 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 11:42:01] 2024-05-18 18:41:49,465 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 11:42:01] 2024-05-18 18:41:49,465 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-18 11:42:01] 2024-05-18 18:41:49,466 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 11:42:01] 2024-05-18 18:41:49,466 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 11:42:01] 2024-05-18 18:41:49,466 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 11:42:01] 2024-05-18 18:41:49,610 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 11:42:01] 2024-05-18 18:41:50,177 | INFO     | all data control threads have been joined
[2024-05-18 11:42:01] 2024-05-18 18:41:50,229 | INFO     | all job control threads have been joined
[2024-05-18 11:42:01] 2024-05-18 18:41:50,357 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 11:42:01] 2024-05-18 18:41:50,358 | INFO     | aborting loop
[2024-05-18 11:42:01] 2024-05-18 18:41:50,470 | INFO     | [job] retrieve thread has finished
[2024-05-18 11:42:01] 2024-05-18 18:41:50,473 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 11:42:01] 2024-05-18 18:41:50,552 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 11:42:01] 2024-05-18 18:41:50,566 | INFO     | all payload control threads have been joined
[2024-05-18 11:42:01] 2024-05-18 18:41:50,567 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 11:42:01] 2024-05-18 18:41:50,649 | INFO     | [job] validate thread has finished
[2024-05-18 11:42:01] 2024-05-18 18:41:50,700 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 11:42:01] 2024-05-18 18:41:50,848 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 11:42:01] 2024-05-18 18:41:50,925 | INFO     | [payload] failed_post thread has finished
[2024-05-18 11:42:01] 2024-05-18 18:41:51,183 | INFO     | [data] control thread has finished
[2024-05-18 11:42:01] 2024-05-18 18:41:51,235 | INFO     | [job] control thread has finished
[2024-05-18 11:42:01] 2024-05-18 18:41:51,309 | INFO     | [data] copytool_in thread has finished
[2024-05-18 11:42:01] 2024-05-18 18:41:51,363 | INFO     | [job] job monitor thread has finished
[2024-05-18 11:42:01] 2024-05-18 18:41:51,528 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 11:42:01] 2024-05-18 18:41:51,571 | INFO     | [payload] control thread has finished
[2024-05-18 11:42:01] 2024-05-18 18:41:51,615 | INFO     | [data] copytool_out thread has finished
[2024-05-18 11:42:01] 2024-05-18 18:41:51,839 | INFO     | [payload] validate_post thread has finished
[2024-05-18 11:42:01] 2024-05-18 18:41:52,529 | INFO     | [job] queue monitor thread has finished
[2024-05-18 11:42:01] 2024-05-18 18:41:54,555 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 11:42:01] 2024-05-18 18:41:55,658 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140408565143360)>', '<ExcThread(monitor, started 140408277411584)>']
[2024-05-18 11:42:01] 2024-05-18 18:41:56,501 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 11:42:01] 2024-05-18 18:41:56,501 | INFO     | [monitor] control thread has ended
[2024-05-18 11:42:01] 2024-05-18 18:42:00,676 | INFO     | all workflow threads have been joined
[2024-05-18 11:42:01] 2024-05-18 18:42:00,676 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 11:42:01] 2024-05-18 18:42:00,676 | INFO     | traces error code: 0
[2024-05-18 11:42:01] 2024-05-18 18:42:00,677 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 11:42:01] 2024-05-18 18:42:00,769 [wrapper] ==== pilot stdout END ====
[2024-05-18 11:42:01] 2024-05-18 18:42:00,773 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 11:42:01] 2024-05-18 18:42:00,776 [wrapper] pilotpid: 135009
[2024-05-18 11:42:01] 2024-05-18 18:42:00,780 [wrapper] Pilot exit status: 0
[2024-05-18 11:42:01] 2024-05-18 18:42:00,791 [wrapper] pandaids: 6208492990
[2024-05-18 11:42:01] 2024-05-18 18:42:00,878 [wrapper] cleanup: SIGTERM to supervisor_pilot 156380 135010
[2024-05-18 11:42:01] 2024-05-18 18:42:00,882 [wrapper] Test setup, not cleaning
[2024-05-18 11:42:01] 2024-05-18 18:42:00,885 [wrapper] ==== wrapper stdout END ====
[2024-05-18 11:42:01] 2024-05-18 18:42:00,890 [wrapper] ==== wrapper stderr END ====
[2024-05-18 11:42:01] 2024-05-18 18:42:00,897 [wrapper] apfmon messages muted
[2024-05-18 11:42:01]  *** Error codes and diagnostics ***
[2024-05-18 11:42:01]     "exeErrorCode": 0,
[2024-05-18 11:42:01]     "exeErrorDiag": "",
[2024-05-18 11:42:01]     "pilotErrorCode": 0,
[2024-05-18 11:42:01]     "pilotErrorDiag": "",
[2024-05-18 11:42:01]  *** Listing of results directory ***
[2024-05-18 11:42:01] total 831948
[2024-05-18 11:42:01] -rw-r--r-- 1 boinc boinc    467845 May 17 20:00 pilot3.tar.gz
[2024-05-18 11:42:01] -rw-r--r-- 1 boinc boinc      5633 May 17 20:14 queuedata.json
[2024-05-18 11:42:01] -rwx------ 1 boinc boinc     32251 May 17 20:16 runpilot2-wrapper.sh
[2024-05-18 11:42:01] -rw-r--r-- 1 boinc boinc       100 May 18 10:24 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 11:42:01] -rwxr-xr-x 1 boinc boinc      7986 May 18 10:24 run_atlas
[2024-05-18 11:42:01] -rw-r--r-- 1 boinc boinc       105 May 18 10:24 job.xml
[2024-05-18 11:42:01] -rw-r--r-- 1 boinc boinc      6621 May 18 10:24 init_data.xml
[2024-05-18 11:42:01] -rw-r--r-- 2 boinc boinc 602181089 May 18 10:24 EVNT.38776119._000452.pool.root.1
[2024-05-18 11:42:01] -rw-r--r-- 2 boinc boinc     17537 May 18 10:24 start_atlas.sh
[2024-05-18 11:42:01] drwxrwx--x 2 boinc boinc      4096 May 18 10:24 shared
[2024-05-18 11:42:01] -rw-r--r-- 2 boinc boinc    480014 May 18 10:24 input.tar.gz
[2024-05-18 11:42:01] -rw-r--r-- 1 boinc boinc         0 May 18 10:24 boinc_lockfile
[2024-05-18 11:42:01] -rw-r--r-- 1 boinc boinc      2635 May 18 10:25 pandaJob.out
[2024-05-18 11:42:01] -rw------- 1 boinc boinc       424 May 18 10:25 setup.sh.local
[2024-05-18 11:42:01] -rw------- 1 boinc boinc   1019065 May 18 10:25 agis_schedconf.cvmfs.json
[2024-05-18 11:42:01] -rw------- 1 boinc boinc         0 May 18 10:25 agis_ddmendpoints.agis.ALL.json
[2024-05-18 11:42:01] -rw------- 1 boinc boinc   1324701 May 18 10:25 cric_ddmendpoints.json
[2024-05-18 11:42:01] drwx------ 4 boinc boinc      4096 May 18 10:25 pilot3
[2024-05-18 11:42:01] -rw-r--r-- 1 boinc boinc       531 May 18 11:40 boinc_task_state.xml
[2024-05-18 11:42:01] -rw------- 1 boinc boinc 244559666 May 18 11:40 HITS.38776125._015803.pool.root.1
[2024-05-18 11:42:01] -rw------- 1 boinc boinc        95 May 18 11:41 pilot_heartbeat.json
[2024-05-18 11:42:01] -rw------- 1 boinc boinc      1050 May 18 11:41 memory_monitor_summary.json
[2024-05-18 11:42:01] -rw------- 1 boinc boinc    369517 May 18 11:41 log.38776125._015803.job.log.tgz.1
[2024-05-18 11:42:01] -rw-r--r-- 1 boinc boinc      8192 May 18 11:41 boinc_mmap_file
[2024-05-18 11:42:01] -rw-r--r-- 1 boinc boinc        27 May 18 11:41 wrapper_checkpoint.txt
[2024-05-18 11:42:01] -rw------- 1 boinc boinc      7766 May 18 11:41 heartbeat.json
[2024-05-18 11:42:01] -rw------- 1 boinc boinc      4333 May 18 11:42 pilotlog.txt
[2024-05-18 11:42:01] -rw------- 1 boinc boinc    451275 May 18 11:42 log.38776125._015803.job.log.1
[2024-05-18 11:42:01] -rw------- 1 boinc boinc       357 May 18 11:42 output.list
[2024-05-18 11:42:01] -rw-r--r-- 1 boinc boinc       620 May 18 11:42 runtime_log
[2024-05-18 11:42:01] -rw------- 1 boinc boinc    839680 May 18 11:42 result.tar.gz
[2024-05-18 11:42:01] -rw------- 1 boinc boinc       654 May 18 11:42 UsiLDmVjPS5n7Olcko1bjSoqABFKDmABFKDmOtvXDmq3ZKDmTTWgOn.diag
[2024-05-18 11:42:01] -rw-r--r-- 1 boinc boinc     11286 May 18 11:42 runtime_log.err
[2024-05-18 11:42:01] -rw-r--r-- 1 boinc boinc     21784 May 18 11:42 stderr.txt
[2024-05-18 11:42:01] HITS file was successfully produced:
[2024-05-18 11:42:01] -rw------- 1 boinc boinc 244559666 May 18 11:40 shared/HITS.pool.root.1
[2024-05-18 11:42:01]  *** Contents of shared directory: ***
[2024-05-18 11:42:01] total 828216
[2024-05-18 11:42:01] -rw-r--r-- 2 boinc boinc 602181089 May 18 10:24 ATLAS.root_0
[2024-05-18 11:42:01] -rw-r--r-- 2 boinc boinc     17537 May 18 10:24 start_atlas.sh
[2024-05-18 11:42:01] -rw-r--r-- 2 boinc boinc    480014 May 18 10:24 input.tar.gz
[2024-05-18 11:42:01] -rw------- 1 boinc boinc 244559666 May 18 11:40 HITS.pool.root.1
[2024-05-18 11:42:01] -rw------- 1 boinc boinc    839680 May 18 11:42 result.tar.gz
11:42:02 (130805): run_atlas exited; CPU time 41019.180714
11:42:02 (130805): called boinc_finish(0)

</stderr_txt>
]]>

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