Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2024-05-18 09:45:01 (6668): vboxwrapper version 26207
2024-05-18 09:45:01 (6668): BOINC client version: 7.20.2
2024-05-18 09:45:02 (6668): Detected: VirtualBox VboxManage Interface (Version: 7.0.12)
2024-05-18 09:45:02 (6668): Successfully copied 'init_data.xml' to the shared directory.
2024-05-18 09:45:02 (6668): Create VM. (boinc_a782ee29f4a521e0, slot#3)
2024-05-18 09:45:03 (6668): Setting Memory Size for VM. (4096MB)
2024-05-18 09:45:03 (6668): Setting CPU Count for VM. (5)
2024-05-18 09:45:03 (6668): Setting Chipset Options for VM.
2024-05-18 09:45:04 (6668): Setting Graphics Controller Options for VM.
2024-05-18 09:45:04 (6668): Setting Boot Options for VM.
2024-05-18 09:45:04 (6668): Setting Network Configuration for NAT.
2024-05-18 09:45:04 (6668): Enabling VM Network Access.
2024-05-18 09:45:05 (6668): Disabling USB Support for VM.
2024-05-18 09:45:05 (6668): Disabling COM Port Support for VM.
2024-05-18 09:45:05 (6668): Disabling LPT Port Support for VM.
2024-05-18 09:45:05 (6668): Disabling Audio Support for VM.
2024-05-18 09:45:06 (6668): Disabling Clipboard Support for VM.
2024-05-18 09:45:06 (6668): Disabling Drag and Drop Support for VM.
2024-05-18 09:45:06 (6668): Adding storage controller(s) to VM.
2024-05-18 09:45:06 (6668): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-05-18 09:45:07 (6668): Adding VirtualBox Guest Additions to VM.
2024-05-18 09:45:07 (6668): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-05-18 09:45:08 (6668): forwarding host port 60437 to guest port 80
2024-05-18 09:45:08 (6668): Enabling remote desktop for VM.
2024-05-18 09:45:09 (6668): Enabling shared directory for VM.
2024-05-18 09:45:09 (6668): Starting VM using VBoxManage interface. (boinc_a782ee29f4a521e0, slot#3)
2024-05-18 09:45:16 (6668): Successfully started VM. (PID = '9260')
2024-05-18 09:45:16 (6668): Reporting VM Process ID to BOINC.
2024-05-18 09:45:16 (6668): Guest Log: BIOS: VirtualBox 7.0.12
2024-05-18 09:45:16 (6668): Guest Log: CPUID EDX: 0x178bfbff
2024-05-18 09:45:16 (6668): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-05-18 09:45:16 (6668): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-05-18 09:45:16 (6668): VM state change detected. (old = 'poweredoff', new = 'running')
2024-05-18 09:45:16 (6668): Detected: Web Application Enabled (http://localhost:60437)
2024-05-18 09:45:16 (6668): Detected: Remote Desktop Enabled (localhost:60438)
2024-05-18 09:45:16 (6668): Preference change detected
2024-05-18 09:45:16 (6668): Setting CPU throttle for VM. (100%)
2024-05-18 09:45:16 (6668): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2024-05-18 09:45:18 (6668): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-05-18 09:45:18 (6668): Guest Log: BIOS: Booting from Hard Disk...
2024-05-18 09:45:21 (6668): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-05-18 09:45:21 (6668): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-05-18 09:45:21 (6668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-05-18 09:45:21 (6668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-05-18 09:45:21 (6668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-05-18 09:45:21 (6668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-05-18 09:45:21 (6668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-05-18 09:45:21 (6668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-05-18 09:45:21 (6668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-05-18 09:45:21 (6668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-05-18 09:45:21 (6668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-05-18 09:45:21 (6668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-05-18 09:45:21 (6668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-05-18 09:45:21 (6668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-05-18 09:45:21 (6668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-05-18 09:45:21 (6668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-05-18 09:45:21 (6668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-05-18 09:45:21 (6668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-05-18 09:45:21 (6668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-05-18 09:45:21 (6668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-05-18 09:45:21 (6668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-05-18 09:45:21 (6668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-05-18 09:45:21 (6668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-05-18 09:45:21 (6668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-05-18 09:45:21 (6668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-05-18 09:45:21 (6668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-05-18 09:45:21 (6668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-05-18 09:45:21 (6668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-05-18 09:45:21 (6668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-05-18 09:45:21 (6668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-05-18 09:45:21 (6668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-05-18 09:45:21 (6668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-05-18 09:45:28 (6668): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-05-18 09:45:28 (6668): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-05-18 09:45:41 (6668): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-05-18 09:45:41 (6668): Guest Log: 00:00:00.000111 main     Log opened 2024-05-18T07:45:38.425453000Z
2024-05-18 09:45:41 (6668): Guest Log: 00:00:00.000201 main     OS Product: Linux
2024-05-18 09:45:41 (6668): Guest Log: 00:00:00.000233 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-05-18 09:45:41 (6668): Guest Log: 00:00:00.000256 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-05-18 09:45:41 (6668): Guest Log: 00:00:00.000281 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-05-18 09:45:41 (6668): Guest Log: 00:00:00.000282 main     Process ID: 1300
2024-05-18 09:45:41 (6668): Guest Log: 00:00:00.000282 main     Package type: LINUX_64BITS_GENERIC
2024-05-18 09:45:41 (6668): Guest Log: 00:00:00.000767 main     5.2.32 r132073 started. Verbose level = 0
2024-05-18 09:45:42 (6668): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-05-18 09:45:42 (6668): Guest Log: [INFO] Mounting shared directory
2024-05-18 09:45:42 (6668): Guest Log: [INFO] Checking for init_data.xml
2024-05-18 09:45:46 (6668): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-05-18 09:45:46 (6668): Guest Log: [INFO] Detected branch: prod
2024-05-18 09:45:46 (6668): Guest Log: This is the prod version of the ATLAS job wrapper
2024-05-18 09:45:46 (6668): Guest Log: Copying input files
2024-05-18 09:45:52 (6668): Guest Log: Copied input files into RunAtlas.
2024-05-18 09:45:52 (6668): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-05-18 09:45:52 (6668): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-05-18 09:45:52 (6668): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-05-18 09:45:52 (6668): Guest Log: Further information can be found at the LHC@home message board.
2024-05-18 09:46:04 (6668): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-05-18 09:46:05 (6668): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-05-18 09:46:05 (6668): Guest Log: 2.6.3.0 1575 0 30164 132871 4 1 3116989 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2024-05-18 09:46:07 (6668): Guest Log: copied the webapp to /var/www
2024-05-18 09:46:07 (6668): Guest Log: ATHENA_PROC_NUMBER=5
2024-05-18 09:46:07 (6668): Guest Log: ATHENA_CORE_NUMBER=5
2024-05-18 09:46:08 (6668): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-05-18 09:46:08 (6668): Guest Log:  *** Starting ATLAS job. (PandaID=6208492945 taskID=38776125) ***
2024-05-18 10:02:01 (6668): Preference change detected
2024-05-18 10:02:01 (6668): Setting CPU throttle for VM. (100%)
2024-05-18 10:02:01 (6668): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2024-05-18 10:36:40 (6668): Preference change detected
2024-05-18 10:36:40 (6668): Setting CPU throttle for VM. (100%)
2024-05-18 10:36:40 (6668): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2024-05-18 10:36:59 (6668): Preference change detected
2024-05-18 10:36:59 (6668): Setting CPU throttle for VM. (100%)
2024-05-18 10:36:59 (6668): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2024-05-18 10:49:33 (6668): Preference change detected
2024-05-18 10:49:33 (6668): Setting CPU throttle for VM. (100%)
2024-05-18 10:49:34 (6668): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2024-05-18 10:50:26 (6668): Preference change detected
2024-05-18 10:50:26 (6668): Setting CPU throttle for VM. (100%)
2024-05-18 10:50:27 (6668): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2024-05-18 11:18:33 (6668): Preference change detected
2024-05-18 11:18:33 (6668): Setting CPU throttle for VM. (100%)
2024-05-18 11:18:33 (6668): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2024-05-18 11:25:43 (6668): Status Report: Elapsed Time: '6000.000000'
2024-05-18 11:25:43 (6668): Status Report: CPU Time: '25806.890625'
2024-05-18 12:01:11 (6668): Guest Log:  *** Job finished ***
2024-05-18 12:01:11 (6668): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-05-18 12:01:11 (6668): Guest Log: 2024-05-18 10:01:02,429 | INFO     | [payload] execute_payloads thread has finished
2024-05-18 12:01:11 (6668): Guest Log: 2024-05-18 10:01:02,972 | INFO     | [job] queue monitor thread has finished
2024-05-18 12:01:11 (6668): Guest Log: 2024-05-18 10:01:04,998 | INFO     | [data] queue_monitor thread has finished
2024-05-18 12:01:11 (6668): Guest Log: 2024-05-18 10:01:05,850 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140606784935744)>', '<ExcThread(monitor, started 140605543933696)>']
2024-05-18 12:01:11 (6668): Guest Log: 2024-05-18 10:01:06,300 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-05-18 12:01:11 (6668): Guest Log: 2024-05-18 10:01:06,300 | INFO     | [monitor] control thread has ended
2024-05-18 12:01:11 (6668): Guest Log: 2024-05-18 10:01:10,860 | INFO     | all workflow threads have been joined
2024-05-18 12:01:11 (6668): Guest Log: 2024-05-18 10:01:10,860 | INFO     | end of generic workflow (traces error code: 0)
2024-05-18 12:01:11 (6668): Guest Log: 2024-05-18 10:01:10,860 | INFO     | traces error code: 0
2024-05-18 12:01:11 (6668): Guest Log: 2024-05-18 10:01:10,860 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-05-18 12:01:11 (6668): Guest Log: 2024-05-18 10:01:10,962 [wrapper] ==== pilot stdout END ====
2024-05-18 12:01:11 (6668): Guest Log: 2024-05-18 10:01:10,966 [wrapper] ==== wrapper stdout RESUME ====
2024-05-18 12:01:11 (6668): Guest Log: 2024-05-18 10:01:10,970 [wrapper] pilotpid: 6465
2024-05-18 12:01:11 (6668): Guest Log: 2024-05-18 10:01:10,974 [wrapper] Pilot exit status: 0
2024-05-18 12:01:11 (6668): Guest Log: 2024-05-18 10:01:11,036 [wrapper] pandaids: 6208492945
2024-05-18 12:01:11 (6668): Guest Log: 2024-05-18 10:01:11,071 [wrapper] cleanup: SIGTERM to supervisor_pilot 25520 6466
2024-05-18 12:01:11 (6668): Guest Log: 2024-05-18 10:01:11,075 [wrapper] Test setup, not cleaning
2024-05-18 12:01:11 (6668): Guest Log: 2024-05-18 10:01:11,078 [wrapper] ==== wrapper stdout END ====
2024-05-18 12:01:11 (6668): Guest Log: 2024-05-18 10:01:11,082 [wrapper] ==== wrapper stderr END ====
2024-05-18 12:01:11 (6668): Guest Log: 2024-05-18 10:01:11,090 [wrapper] apfmon messages muted
2024-05-18 12:01:11 (6668): Guest Log:  *** Error codes and diagnostics ***
2024-05-18 12:01:11 (6668): Guest Log:     "exeErrorCode": 0,
2024-05-18 12:01:11 (6668): Guest Log:     "exeErrorDiag": "",
2024-05-18 12:01:11 (6668): Guest Log:     "pilotErrorCode": 0,
2024-05-18 12:01:11 (6668): Guest Log:     "pilotErrorDiag": "",
2024-05-18 12:01:11 (6668): Guest Log:  *** Listing of results directory ***
2024-05-18 12:01:11 (6668): Guest Log: total 250516
2024-05-18 12:01:11 (6668): Guest Log: -rw-r--r--. 1 atlas atlas    467845 May 18 03:00 pilot3.tar.gz
2024-05-18 12:01:11 (6668): Guest Log: -rw-r--r--. 1 atlas atlas      5633 May 18 03:14 queuedata.json
2024-05-18 12:01:11 (6668): Guest Log: -rwx------. 1 atlas atlas     32251 May 18 03:15 runpilot2-wrapper.sh
2024-05-18 12:01:11 (6668): Guest Log: -rwxr-xr-x. 1 atlas atlas      8961 May 18 07:45 init_data.xml
2024-05-18 12:01:11 (6668): Guest Log: -rwxr-xr-x. 1 atlas atlas    480016 May 18 07:45 input.tar.gz
2024-05-18 12:01:11 (6668): Guest Log: -rwxr-xr-x. 1 atlas atlas     17537 May 18 07:45 start_atlas.sh
2024-05-18 12:01:11 (6668): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 18 07:45 EVNT.38776119._000451.pool.root.1 -> /data/./ATLAS.root_0
2024-05-18 12:01:11 (6668): Guest Log: -rw-r--r--. 1 atlas atlas      2636 May 18 07:46 pandaJob.out
2024-05-18 12:01:11 (6668): Guest Log: -rw-------. 1 atlas atlas       424 May 18 07:46 setup.sh.local
2024-05-18 12:01:11 (6668): Guest Log: -rw-------. 1 atlas atlas   1019073 May 18 07:46 agis_schedconf.cvmfs.json
2024-05-18 12:01:11 (6668): Guest Log: -rw-------. 1 atlas atlas         0 May 18 07:46 agis_ddmendpoints.agis.ALL.json
2024-05-18 12:01:11 (6668): Guest Log: -rw-------. 1 atlas atlas   1324701 May 18 07:46 cric_ddmendpoints.json
2024-05-18 12:01:11 (6668): Guest Log: drwx------. 4 atlas atlas      4096 May 18 07:46 pilot3
2024-05-18 12:01:11 (6668): Guest Log: -rw-------. 1 atlas atlas        95 May 18 10:00 pilot_heartbeat.json
2024-05-18 12:01:11 (6668): Guest Log: -rw-------. 1 atlas atlas 251177173 May 18 10:00 HITS.38776125._015767.pool.root.1
2024-05-18 12:01:11 (6668): Guest Log: -rw-------. 1 atlas atlas      1032 May 18 10:00 memory_monitor_summary.json
2024-05-18 12:01:11 (6668): Guest Log: -rw-------. 1 atlas atlas    276475 May 18 10:00 log.38776125._015767.job.log.tgz.1
2024-05-18 12:01:11 (6668): Guest Log: -rw-------. 1 atlas atlas      7738 May 18 10:00 heartbeat.json
2024-05-18 12:01:11 (6668): Guest Log: -rw-------. 1 atlas atlas      4457 May 18 10:01 pilotlog.txt
2024-05-18 12:01:11 (6668): Guest Log: -rw-------. 1 atlas atlas    669832 May 18 10:01 log.38776125._015767.job.log.1
2024-05-18 12:01:11 (6668): Guest Log: -rw-------. 1 atlas atlas       357 May 18 10:01 output.list
2024-05-18 12:01:11 (6668): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 18 10:01 runtime_log
2024-05-18 12:01:11 (6668): Guest Log: -rw-------. 1 atlas atlas    962560 May 18 10:01 result.tar.gz
2024-05-18 12:01:11 (6668): Guest Log: -rw-r--r--. 1 atlas atlas     10945 May 18 10:01 runtime_log.err
2024-05-18 12:01:11 (6668): Guest Log: -rw-------. 1 atlas atlas       649 May 18 10:01 rtNODmziPS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmVyRKDmky9R6n.diag
2024-05-18 12:01:11 (6668): Guest Log: Looking for outputfile HITS.38776125._015767.pool.root.1
2024-05-18 12:01:11 (6668): Guest Log: HITS file was successfully produced
2024-05-18 12:01:11 (6668): Guest Log: -rw-------. 1 atlas atlas 251177173 May 18 10:00 /home/atlas/RunAtlas/HITS.38776125._015767.pool.root.1
2024-05-18 12:01:12 (6668): Guest Log: Successfully finished the ATLAS job!
2024-05-18 12:01:12 (6668): Guest Log: Copying the results back to the shared directory!
2024-05-18 12:01:12 (6668): Guest Log:  *** Contents of shared directory: ***
2024-05-18 12:01:13 (6668): Guest Log: total 835640
2024-05-18 12:01:13 (6668): Guest Log: -rwxrwxrwx. 1 root root 603036327 May 18 07:45 ATLAS.root_0
2024-05-18 12:01:13 (6668): Guest Log: -rwxrwxrwx. 1 root root 251177173 May 18 10:01 HITS.pool.root.1
2024-05-18 12:01:13 (6668): Guest Log: -rwxrwxrwx. 1 root root      8961 May 18 07:45 init_data.xml
2024-05-18 12:01:13 (6668): Guest Log: -rwxrwxrwx. 1 root root    480016 May 18 07:25 input.tar.gz
2024-05-18 12:01:13 (6668): Guest Log: -rwxrwxrwx. 1 root root    962560 May 18 10:01 result.tar.gz
2024-05-18 12:01:13 (6668): Guest Log: -rwxrwxrwx. 1 root root     17537 May 18 07:25 start_atlas.sh
2024-05-18 12:01:13 (6668): Guest Log:  *** Success! Shutting down the machine. ***
2024-05-18 12:01:13 (6668): VM Completion File Detected.
2024-05-18 12:01:13 (6668): Powering off VM.
2024-05-18 12:01:14 (6668): Successfully stopped VM.
2024-05-18 12:01:14 (6668): Deregistering VM. (boinc_a782ee29f4a521e0, slot#3)
2024-05-18 12:01:14 (6668): Removing network bandwidth throttle group from VM.
2024-05-18 12:01:14 (6668): Removing VM from VirtualBox.
2024-05-18 12:01:19 (6668): called boinc_finish(0)

</stderr_txt>
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