Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:14:35 (2493550): wrapper (7.7.26015): starting
09:14:35 (2493550): wrapper: running run_atlas (--nthreads 4)
[2024-05-20 09:14:35] Arguments: --nthreads 4
[2024-05-20 09:14:35] Threads: 4
[2024-05-20 09:14:35] Checking for CVMFS
[2024-05-20 09:14:35] No cvmfs_config command found, will try listing directly
[2024-05-20 09:14:35] CVMFS is ok
[2024-05-20 09:14:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-20 09:14:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-20 09:14:35] Further information can be found at the LHC@home message board.
[2024-05-20 09:14:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-20 09:14:35] Checking for apptainer binary...
[2024-05-20 09:14:35] which: no apptainer in ((null))
[2024-05-20 09:14:35] apptainer is not installed, using version from CVMFS
[2024-05-20 09:14:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-20 09:14:35] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2024-05-20 09:14:35] apptainer works
[2024-05-20 09:14:35] Set ATHENA_PROC_NUMBER=4
[2024-05-20 09:14:35] Set ATHENA_CORE_NUMBER=4
[2024-05-20 09:14:35] Starting ATLAS job with PandaID=6208492859
[2024-05-20 09:14:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-20 11:03:44]  *** The last 200 lines of the pilot log: ***
[2024-05-20 11:03:44] 2024-05-20 09:03:22,831 | INFO     | fitting pss+swap vs Time
[2024-05-20 11:03:44] 2024-05-20 09:03:22,831 | INFO     | model: linear, x: [1716189308.0, 1716189369.0, 1716189430.0, 1716189491.0, 1716189552.0, 1716189613.0, 1716189674.0, 1716189735.0, 1716189796.0, 1716189857.0, 1716
[2024-05-20 11:03:44] 2024-05-20 09:03:22,832 | INFO     | sum of square deviations: 379832238.0
[2024-05-20 11:03:44] 2024-05-20 09:03:22,833 | INFO     | sum of deviations: 39560082400.99999
[2024-05-20 11:03:44] 2024-05-20 09:03:22,833 | INFO     | mean x: 1716192541.0
[2024-05-20 11:03:44] 2024-05-20 09:03:22,833 | INFO     | mean y: 2187539.728971963
[2024-05-20 11:03:44] 2024-05-20 09:03:22,833 | INFO     | -- intersect: -178741772413.30048
[2024-05-20 11:03:44] 2024-05-20 09:03:22,833 | INFO     | intersect: -178741772413.30048
[2024-05-20 11:03:44] 2024-05-20 09:03:22,834 | INFO     | chi2: 5.0818111654560365
[2024-05-20 11:03:44] 2024-05-20 09:03:22,834 | INFO     | model: linear, x: [1716189308.0, 1716189369.0, 1716189430.0, 1716189491.0, 1716189552.0, 1716189613.0, 1716189674.0, 1716189735.0, 1716189796.0, 1716189857.0, 1716
[2024-05-20 11:03:44] 2024-05-20 09:03:22,834 | INFO     | sum of square deviations: 329031285.5
[2024-05-20 11:03:44] 2024-05-20 09:03:22,835 | INFO     | sum of deviations: 44071663476.5
[2024-05-20 11:03:44] 2024-05-20 09:03:22,835 | INFO     | mean x: 1716192388.5
[2024-05-20 11:03:44] 2024-05-20 09:03:22,835 | INFO     | mean y: 2200309.2843137253
[2024-05-20 11:03:44] 2024-05-20 09:03:22,835 | INFO     | -- intersect: -229870935590.1369
[2024-05-20 11:03:44] 2024-05-20 09:03:22,836 | INFO     | intersect: -229870935590.1369
[2024-05-20 11:03:44] 2024-05-20 09:03:22,836 | INFO     | chi2: 4.2581399044561605
[2024-05-20 11:03:44] 2024-05-20 09:03:22,836 | INFO     | current chi2=4.2581399044561605 (change=16.208222505370497 %)
[2024-05-20 11:03:44] 2024-05-20 09:03:22,836 | INFO     | right removable region: 101
[2024-05-20 11:03:44] 2024-05-20 09:03:22,836 | INFO     | model: linear, x: [1716189613.0, 1716189674.0, 1716189735.0, 1716189796.0, 1716189857.0, 1716189918.0, 1716189979.0, 1716190040.0, 1716190101.0, 1716190162.0, 1716
[2024-05-20 11:03:44] 2024-05-20 09:03:22,836 | INFO     | sum of square deviations: 329031285.5
[2024-05-20 11:03:44] 2024-05-20 09:03:22,837 | INFO     | sum of deviations: 15495340840.999994
[2024-05-20 11:03:44] 2024-05-20 09:03:22,837 | INFO     | mean x: 1716192693.5
[2024-05-20 11:03:44] 2024-05-20 09:03:22,837 | INFO     | mean y: 2259440.274509804
[2024-05-20 11:03:44] 2024-05-20 09:03:22,838 | INFO     | -- intersect: -80819814041.90303
[2024-05-20 11:03:44] 2024-05-20 09:03:22,838 | INFO     | intersect: -80819814041.90303
[2024-05-20 11:03:44] 2024-05-20 09:03:22,838 | INFO     | chi2: 2.4926489059018353
[2024-05-20 11:03:44] 2024-05-20 09:03:22,838 | INFO     | current chi2=2.4926489059018353 (change=50.94959602501981 %)
[2024-05-20 11:03:44] 2024-05-20 09:03:22,838 | INFO     | model: linear, x: [1716189918.0, 1716189979.0, 1716190040.0, 1716190101.0, 1716190162.0, 1716190223.0, 1716190284.0, 1716190345.0, 1716190406.0, 1716190467.0, 1716
[2024-05-20 11:03:44] 2024-05-20 09:03:22,839 | INFO     | sum of square deviations: 282974608.0
[2024-05-20 11:03:44] 2024-05-20 09:03:22,839 | INFO     | sum of deviations: -4081777058.0
[2024-05-20 11:03:44] 2024-05-20 09:03:22,839 | INFO     | mean x: 1716192846.0
[2024-05-20 11:03:44] 2024-05-20 09:03:22,839 | INFO     | mean y: 2324303.0721649486
[2024-05-20 11:03:44] 2024-05-20 09:03:22,840 | INFO     | -- intersect: 24757607596.570103
[2024-05-20 11:03:44] 2024-05-20 09:03:22,840 | INFO     | intersect: 24757607596.570103
[2024-05-20 11:03:44] 2024-05-20 09:03:22,840 | INFO     | chi2: 0.8971329242853449
[2024-05-20 11:03:44] 2024-05-20 09:03:22,840 | INFO     | current chi2=0.8971329242853449 (change=64.00885330616732 %)
[2024-05-20 11:03:44] 2024-05-20 09:03:22,840 | INFO     | model: linear, x: [1716190223.0, 1716190284.0, 1716190345.0, 1716190406.0, 1716190467.0, 1716190528.0, 1716190589.0, 1716190650.0, 1716190711.0, 1716190772.0, 1716
[2024-05-20 11:03:44] 2024-05-20 09:03:22,841 | INFO     | sum of square deviations: 241429643.0
[2024-05-20 11:03:44] 2024-05-20 09:03:22,841 | INFO     | sum of deviations: -5992030396.5
[2024-05-20 11:03:44] 2024-05-20 09:03:22,841 | INFO     | mean x: 1716192998.5
[2024-05-20 11:03:44] 2024-05-20 09:03:22,842 | INFO     | mean y: 2331082.1413043477
[2024-05-20 11:03:44] 2024-05-20 09:03:22,842 | INFO     | -- intersect: 42596440427.99524
[2024-05-20 11:03:44] 2024-05-20 09:03:22,842 | INFO     | intersect: 42596440427.99524
[2024-05-20 11:03:44] 2024-05-20 09:03:22,842 | INFO     | chi2: 0.8540221629689121
[2024-05-20 11:03:44] 2024-05-20 09:03:22,842 | INFO     | current chi2=0.8540221629689121 (change=4.805392840840699 %)
[2024-05-20 11:03:44] 2024-05-20 09:03:22,842 | INFO     | left removable region: 30
[2024-05-20 11:03:44] 2024-05-20 09:03:22,842 | INFO     | model: linear, x: [1716191138.0, 1716191199.0, 1716191260.0, 1716191321.0, 1716191382.0, 1716191443.0, 1716191504.0, 1716191565.0, 1716191626.0, 1716191687.0, 1716
[2024-05-20 11:03:44] 2024-05-20 09:03:22,843 | INFO     | sum of square deviations: 110960220.0
[2024-05-20 11:03:44] 2024-05-20 09:03:22,843 | INFO     | sum of deviations: -192046543.99999952
[2024-05-20 11:03:44] 2024-05-20 09:03:22,843 | INFO     | mean x: 1716193273.0
[2024-05-20 11:03:44] 2024-05-20 09:03:22,843 | INFO     | mean y: 2354795.2112676054
[2024-05-20 11:03:44] 2024-05-20 09:03:22,844 | INFO     | -- intersect: 2972689451.3222384
[2024-05-20 11:03:44] 2024-05-20 09:03:22,844 | INFO     | intersect: 2972689451.3222384
[2024-05-20 11:03:44] 2024-05-20 09:03:22,844 | INFO     | chi2: 0.00031542063251886054
[2024-05-20 11:03:44] 2024-05-20 09:03:22,844 | INFO     | -- intersect: 2972689451.3222384
[2024-05-20 11:03:44] 2024-05-20 09:03:22,844 | INFO     | current memory leak: -1.73 B/s (using 71 data points, chi2=0.00)
[2024-05-20 11:03:44] 2024-05-20 09:03:22,845 | INFO     | ..............................
[2024-05-20 11:03:44] 2024-05-20 09:03:22,845 | INFO     | . Timing measurements:
[2024-05-20 11:03:44] 2024-05-20 09:03:22,845 | INFO     | . get job = 0 s
[2024-05-20 11:03:44] 2024-05-20 09:03:22,845 | INFO     | . initial setup = 0 s
[2024-05-20 11:03:44] 2024-05-20 09:03:22,845 | INFO     | . payload setup = 4 s
[2024-05-20 11:03:44] 2024-05-20 09:03:22,845 | INFO     | . stage-in = 0 s
[2024-05-20 11:03:44] 2024-05-20 09:03:22,845 | INFO     | . payload execution = 6489 s
[2024-05-20 11:03:44] 2024-05-20 09:03:22,845 | INFO     | . stage-out = 0 s
[2024-05-20 11:03:44] 2024-05-20 09:03:22,845 | INFO     | . log creation = 0 s
[2024-05-20 11:03:44] 2024-05-20 09:03:22,846 | INFO     | ..............................
[2024-05-20 11:03:44] 2024-05-20 09:03:22,918 | INFO     | 
[2024-05-20 11:03:44] 2024-05-20 09:03:22,919 | INFO     | job summary report
[2024-05-20 11:03:44] 2024-05-20 09:03:22,919 | INFO     | --------------------------------------------------
[2024-05-20 11:03:44] 2024-05-20 09:03:22,919 | INFO     | PanDA job id: 6208492859
[2024-05-20 11:03:44] 2024-05-20 09:03:22,919 | INFO     | task id: 38776104
[2024-05-20 11:03:44] 2024-05-20 09:03:22,919 | INFO     | errors: (none)
[2024-05-20 11:03:44] 2024-05-20 09:03:22,919 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-20 11:03:44] 2024-05-20 09:03:22,919 | INFO     | pilot state: finished 
[2024-05-20 11:03:44] 2024-05-20 09:03:22,919 | INFO     | transexitcode: 0
[2024-05-20 11:03:44] 2024-05-20 09:03:22,919 | INFO     | exeerrorcode: 0
[2024-05-20 11:03:44] 2024-05-20 09:03:22,919 | INFO     | exeerrordiag: 
[2024-05-20 11:03:44] 2024-05-20 09:03:22,919 | INFO     | exitcode: 0
[2024-05-20 11:03:44] 2024-05-20 09:03:22,919 | INFO     | exitmsg: OK
[2024-05-20 11:03:44] 2024-05-20 09:03:22,919 | INFO     | cpuconsumptiontime: 23313 s
[2024-05-20 11:03:44] 2024-05-20 09:03:22,919 | INFO     | nevents: 400
[2024-05-20 11:03:44] 2024-05-20 09:03:22,919 | INFO     | neventsw: 0
[2024-05-20 11:03:44] 2024-05-20 09:03:22,919 | INFO     | pid: 2511184
[2024-05-20 11:03:44] 2024-05-20 09:03:22,919 | INFO     | pgrp: 2511184
[2024-05-20 11:03:44] 2024-05-20 09:03:22,920 | INFO     | corecount: 4
[2024-05-20 11:03:44] 2024-05-20 09:03:22,920 | INFO     | event service: False
[2024-05-20 11:03:44] 2024-05-20 09:03:22,920 | INFO     | sizes: {0: 2392044, 1: 2392215, 4: 2392449, 11: 2392477, 6497: 2419576, 6498: 2419575, 6499: 2428799, 6504: 2428913}
[2024-05-20 11:03:44] 2024-05-20 09:03:22,920 | INFO     | --------------------------------------------------
[2024-05-20 11:03:44] 2024-05-20 09:03:22,920 | INFO     | 
[2024-05-20 11:03:44] 2024-05-20 09:03:22,920 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/0
[2024-05-20 11:03:44] 2024-05-20 09:03:23,000 | WARNING  | process 2511184 is no longer using CPU - aborting
[2024-05-20 11:03:44] 2024-05-20 09:03:23,003 | INFO     | aborting job monitoring since job object (job id=6208492859) has expired
[2024-05-20 11:03:44] 2024-05-20 09:03:23,022 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-20 11:03:44] 2024-05-20 09:03:23,022 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-20 11:03:44] 2024-05-20 09:03:23,022 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-20 11:03:44] 2024-05-20 09:03:23,023 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-20 11:03:44] 2024-05-20 09:03:23,023 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-20 11:03:44] 2024-05-20 09:03:23,023 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-20 11:03:44] 2024-05-20 09:03:23,023 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-20 11:03:44] 2024-05-20 09:03:23,023 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-20 11:03:44] 2024-05-20 09:03:23,023 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-20 11:03:44] 2024-05-20 09:03:23,023 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-20 11:03:44] 2024-05-20 09:03:23,023 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-20 11:03:44] 2024-05-20 09:03:23,023 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-20 11:03:44] 2024-05-20 09:03:23,023 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-20 11:03:44] 2024-05-20 09:03:23,023 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-20 11:03:44] 2024-05-20 09:03:23,023 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-20 11:03:44] 2024-05-20 09:03:23,023 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-20 11:03:44] 2024-05-20 09:03:23,024 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-20 11:03:44] 2024-05-20 09:03:23,024 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-20 11:03:44] 2024-05-20 09:03:23,024 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-20 11:03:44] 2024-05-20 09:03:23,024 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-20 11:03:44] 2024-05-20 09:03:23,024 | INFO     | job 6208492859 has completed (purged errors)
[2024-05-20 11:03:44] 2024-05-20 09:03:23,024 | INFO     | overall cleanup function is called
[2024-05-20 11:03:44] 2024-05-20 09:03:24,032 | INFO     | --- collectZombieJob: --- 10, [2511184]
[2024-05-20 11:03:44] 2024-05-20 09:03:24,032 | INFO     | zombie collector waiting for pid 2511184
[2024-05-20 11:03:44] 2024-05-20 09:03:24,032 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-20 11:03:44] 2024-05-20 09:03:25,037 | INFO     | collected zombie processes
[2024-05-20 11:03:44] 2024-05-20 09:03:25,037 | INFO     | will now attempt to kill all subprocesses of pid=2511184
[2024-05-20 11:03:44] 2024-05-20 09:03:25,263 | INFO     | process IDs to be killed: [2511184] (in reverse order)
[2024-05-20 11:03:44] 2024-05-20 09:03:25,400 | WARNING  | found no corresponding commands to process id(s)
[2024-05-20 11:03:44] 2024-05-20 09:03:25,400 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-20 11:03:44] 2024-05-20 09:03:25,416 | INFO     | did not find any defunct processes belonging to 2511184
[2024-05-20 11:03:44] 2024-05-20 09:03:25,424 | INFO     | did not find any defunct processes belonging to 2511184
[2024-05-20 11:03:44] 2024-05-20 09:03:25,424 | INFO     | ready for new job
[2024-05-20 11:03:44] 2024-05-20 09:03:25,424 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-20 11:03:44] 2024-05-20 09:03:25,425 | INFO     | *************************************
[2024-05-20 11:03:44] 2024-05-20 09:03:25,425 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-20 11:03:44] 2024-05-20 09:03:25,425 | INFO     | *************************************
[2024-05-20 11:03:44] 2024-05-20 09:03:25,425 | INFO     | 
[2024-05-20 11:03:44] 2024-05-20 09:03:25,430 | INFO     | architecture information:
[2024-05-20 11:03:44] 2024-05-20 09:03:25,430 | INFO     | executing command: cat /etc/os-release
[2024-05-20 11:03:44] 2024-05-20 09:03:25,449 | INFO     | cat /etc/os-release:
[2024-05-20 11:03:44] NAME="CentOS Linux"
[2024-05-20 11:03:44] VERSION="7 (Core)"
[2024-05-20 11:03:44] ID="centos"
[2024-05-20 11:03:44] ID_LIKE="rhel fedora"
[2024-05-20 11:03:44] VERSION_ID="7"
[2024-05-20 11:03:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-20 11:03:44] ANSI_COLOR="0;31"
[2024-05-20 11:03:44] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-20 11:03:44] HOME_URL="https://www.centos.org/"
[2024-05-20 11:03:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-20 11:03:44] 
[2024-05-20 11:03:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-20 11:03:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-20 11:03:44] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-20 11:03:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-20 11:03:44] 
[2024-05-20 11:03:44] 2024-05-20 09:03:25,449 | INFO     | *************************************
[2024-05-20 11:03:44] 2024-05-20 09:03:25,952 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/0
[2024-05-20 11:03:44] 2024-05-20 09:03:25,973 | INFO     | sufficient remaining disk space (2991651291136 B)
[2024-05-20 11:03:44] 2024-05-20 09:03:25,974 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-20 11:03:44] 2024-05-20 09:03:25,974 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-20 11:03:44] 2024-05-20 09:03:25,989 | INFO     | all data control threads have been joined
[2024-05-20 11:03:44] 2024-05-20 09:03:26,005 | INFO     | all job control threads have been joined
[2024-05-20 11:03:44] 2024-05-20 09:03:26,016 | INFO     | all payload control threads have been joined
[2024-05-20 11:03:44] 2024-05-20 09:03:26,114 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-20 11:03:44] 2024-05-20 09:03:26,511 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-20 11:03:44] 2024-05-20 09:03:26,511 | INFO     | aborting loop
[2024-05-20 11:03:44] 2024-05-20 09:03:26,969 | INFO     | found 0 job(s) in 20 queues
[2024-05-20 11:03:44] 2024-05-20 09:03:26,970 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-20 11:03:44] 2024-05-20 09:03:26,970 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-20 11:03:44] 2024-05-20 09:03:26,978 | INFO     | [job] retrieve thread has finished
[2024-05-20 11:03:44] 2024-05-20 09:03:26,994 | INFO     | [data] control thread has finished
[2024-05-20 11:03:44] 2024-05-20 09:03:27,011 | INFO     | [job] control thread has finished
[2024-05-20 11:03:44] 2024-05-20 09:03:27,021 | INFO     | [payload] control thread has finished
[2024-05-20 11:03:44] 2024-05-20 09:03:27,165 | INFO     | [payload] validate_post thread has finished
[2024-05-20 11:03:44] 2024-05-20 09:03:27,517 | INFO     | [job] job monitor thread has finished
[2024-05-20 11:03:44] 2024-05-20 09:03:27,597 | INFO     | [payload] execute_payloads thread has finished
[2024-05-20 11:03:44] 2024-05-20 09:03:27,708 | INFO     | [data] copytool_in thread has finished
[2024-05-20 11:03:44] 2024-05-20 09:03:27,928 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-20 11:03:44] 2024-05-20 09:03:28,088 | INFO     | [job] validate thread has finished
[2024-05-20 11:03:44] 2024-05-20 09:03:28,120 | INFO     | [data] copytool_out thread has finished
[2024-05-20 11:03:44] 2024-05-20 09:03:28,143 | INFO     | [payload] failed_post thread has finished
[2024-05-20 11:03:44] 2024-05-20 09:03:28,353 | INFO     | [payload] validate_pre thread has finished
[2024-05-20 11:03:44] 2024-05-20 09:03:28,397 | INFO     | [job] create_data_payload thread has finished
[2024-05-20 11:03:44] 2024-05-20 09:03:28,701 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-20 11:03:44] 2024-05-20 09:03:28,933 | INFO     | [job] queue monitor thread has finished
[2024-05-20 11:03:44] 2024-05-20 09:03:32,707 | INFO     | [data] queue_monitor thread has finished
[2024-05-20 11:03:44] 2024-05-20 09:03:36,582 | INFO     | job.realtimelogging is not enabled
[2024-05-20 11:03:44] 2024-05-20 09:03:37,588 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-20 11:03:44] 2024-05-20 09:03:38,232 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47624605021248)>', '<ExcThread(monitor, started 47624774170368)>']
[2024-05-20 11:03:44] 2024-05-20 09:03:39,030 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-20 11:03:44] 2024-05-20 09:03:39,031 | INFO     | [monitor] control thread has ended
[2024-05-20 11:03:44] 2024-05-20 09:03:43,257 | INFO     | all workflow threads have been joined
[2024-05-20 11:03:44] 2024-05-20 09:03:43,258 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-20 11:03:44] 2024-05-20 09:03:43,258 | INFO     | traces error code: 0
[2024-05-20 11:03:44] 2024-05-20 09:03:43,258 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-20 11:03:44] 2024-05-20 09:03:43,323 [wrapper] ==== pilot stdout END ====
[2024-05-20 11:03:44] 2024-05-20 09:03:43,325 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-20 11:03:44] 2024-05-20 09:03:43,327 [wrapper] pilotpid: 2498186
[2024-05-20 11:03:44] 2024-05-20 09:03:43,328 [wrapper] Pilot exit status: 0
[2024-05-20 11:03:44] 2024-05-20 09:03:43,335 [wrapper] pandaids: 6208492859
[2024-05-20 11:03:44] 2024-05-20 09:03:43,410 [wrapper] cleanup: SIGTERM to supervisor_pilot 3183764 2498187
[2024-05-20 11:03:44] 2024-05-20 09:03:43,412 [wrapper] Test setup, not cleaning
[2024-05-20 11:03:44] 2024-05-20 09:03:43,413 [wrapper] ==== wrapper stdout END ====
[2024-05-20 11:03:44] 2024-05-20 09:03:43,415 [wrapper] ==== wrapper stderr END ====
[2024-05-20 11:03:44] 2024-05-20 09:03:43,418 [wrapper] apfmon messages muted
[2024-05-20 11:03:44]  *** Error codes and diagnostics ***
[2024-05-20 11:03:44]     "exeErrorCode": 0,
[2024-05-20 11:03:44]     "exeErrorDiag": "",
[2024-05-20 11:03:44]     "pilotErrorCode": 0,
[2024-05-20 11:03:44]     "pilotErrorDiag": "",
[2024-05-20 11:03:44]  *** Listing of results directory ***
[2024-05-20 11:03:44] total 821112
[2024-05-20 11:03:44] -rw-r--r-- 1 boinc boinc    467845 May 18 05:00 pilot3.tar.gz
[2024-05-20 11:03:44] -rw-r--r-- 1 boinc boinc      5633 May 18 05:03 queuedata.json
[2024-05-20 11:03:44] -rwx------ 1 boinc boinc     32251 May 18 05:03 runpilot2-wrapper.sh
[2024-05-20 11:03:44] -rw-r--r-- 1 boinc boinc       100 May 20 09:14 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-20 11:03:44] -rwxr-xr-x 1 boinc boinc      7986 May 20 09:14 run_atlas
[2024-05-20 11:03:44] -rw-r--r-- 1 boinc boinc       105 May 20 09:14 job.xml
[2024-05-20 11:03:44] -rw-r--r-- 1 boinc boinc      6646 May 20 09:14 init_data.xml
[2024-05-20 11:03:44] -rw-r--r-- 2 boinc boinc 602497056 May 20 09:14 EVNT.38776100._000261.pool.root.1
[2024-05-20 11:03:44] -rw-r--r-- 2 boinc boinc     17537 May 20 09:14 start_atlas.sh
[2024-05-20 11:03:44] drwxrwx--x 2 boinc boinc      4096 May 20 09:14 shared
[2024-05-20 11:03:44] -rw-r--r-- 2 boinc boinc    480010 May 20 09:14 input.tar.gz
[2024-05-20 11:03:44] -rw-r--r-- 1 boinc boinc         0 May 20 09:14 boinc_lockfile
[2024-05-20 11:03:44] -rw-r--r-- 1 boinc boinc      2642 May 20 09:14 pandaJob.out
[2024-05-20 11:03:44] -rw------- 1 boinc boinc       424 May 20 09:14 setup.sh.local
[2024-05-20 11:03:44] -rw------- 1 boinc boinc   1013883 May 20 09:14 agis_schedconf.cvmfs.json
[2024-05-20 11:03:44] -rw------- 1 boinc boinc         0 May 20 09:14 agis_ddmendpoints.agis.ALL.json
[2024-05-20 11:03:44] -rw------- 1 boinc boinc   1324701 May 20 09:14 cric_ddmendpoints.json
[2024-05-20 11:03:44] drwx------ 4 boinc boinc      4096 May 20 09:14 pilot3
[2024-05-20 11:03:44] -rw-r--r-- 1 boinc boinc       530 May 20 11:02 boinc_task_state.xml
[2024-05-20 11:03:44] -rw------- 1 boinc boinc 232923941 May 20 11:02 HITS.38776104._015239.pool.root.1
[2024-05-20 11:03:44] -rw------- 1 boinc boinc        95 May 20 11:03 pilot_heartbeat.json
[2024-05-20 11:03:44] -rw-r--r-- 1 boinc boinc        27 May 20 11:03 wrapper_checkpoint.txt
[2024-05-20 11:03:44] -rw-r--r-- 1 boinc boinc      8192 May 20 11:03 boinc_mmap_file
[2024-05-20 11:03:44] -rw------- 1 boinc boinc      1045 May 20 11:03 memory_monitor_summary.json
[2024-05-20 11:03:44] -rw------- 1 boinc boinc    262056 May 20 11:03 log.38776104._015239.job.log.tgz.1
[2024-05-20 11:03:44] -rw------- 1 boinc boinc      7718 May 20 11:03 heartbeat.json
[2024-05-20 11:03:44] -rw------- 1 boinc boinc      4295 May 20 11:03 pilotlog.txt
[2024-05-20 11:03:44] -rw------- 1 boinc boinc    670539 May 20 11:03 log.38776104._015239.job.log.1
[2024-05-20 11:03:44] -rw------- 1 boinc boinc       357 May 20 11:03 output.list
[2024-05-20 11:03:44] -rw-r--r-- 1 boinc boinc       620 May 20 11:03 runtime_log
[2024-05-20 11:03:44] -rw------- 1 boinc boinc    952320 May 20 11:03 result.tar.gz
[2024-05-20 11:03:44] -rw-r--r-- 1 boinc boinc     11428 May 20 11:03 runtime_log.err
[2024-05-20 11:03:44] -rw------- 1 boinc boinc       655 May 20 11:03 GOyNDmTXPS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmYxRKDm5fwhkn.diag
[2024-05-20 11:03:44] -rw-r--r-- 1 boinc boinc     21328 May 20 11:03 stderr.txt
[2024-05-20 11:03:44] HITS file was successfully produced:
[2024-05-20 11:03:44] -rw------- 1 boinc boinc 232923941 May 20 11:02 shared/HITS.pool.root.1
[2024-05-20 11:03:44]  *** Contents of shared directory: ***
[2024-05-20 11:03:44] total 817280
[2024-05-20 11:03:44] -rw-r--r-- 2 boinc boinc 602497056 May 20 09:14 ATLAS.root_0
[2024-05-20 11:03:44] -rw-r--r-- 2 boinc boinc     17537 May 20 09:14 start_atlas.sh
[2024-05-20 11:03:44] -rw-r--r-- 2 boinc boinc    480010 May 20 09:14 input.tar.gz
[2024-05-20 11:03:44] -rw------- 1 boinc boinc 232923941 May 20 11:02 HITS.pool.root.1
[2024-05-20 11:03:44] -rw------- 1 boinc boinc    952320 May 20 11:03 result.tar.gz
11:03:46 (2493550): run_atlas exited; CPU time 23153.508061
11:03:46 (2493550): called boinc_finish(0)

</stderr_txt>
]]>

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