Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
08:45:52 (252357): wrapper (7.7.26015): starting
08:45:52 (252357): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 08:45:52] Arguments: --nthreads 12
[2024-05-18 08:45:52] Threads: 12
[2024-05-18 08:45:52] Checking for CVMFS
[2024-05-18 08:45:52] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 08:45:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 08:45:52] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 08:45:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 08:45:53] 2.10.1.0 2908 73017 124856 132884 3 131 35821968 45568000 12229 130560 0 366898853 99.762 232423780 18679 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-05-18 08:45:53] CVMFS is ok
[2024-05-18 08:45:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 08:45:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 08:45:53] Further information can be found at the LHC@home message board.
[2024-05-18 08:45:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 08:45:53] Checking for apptainer binary...
[2024-05-18 08:45:53] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 08:45:53] Running /usr/bin/apptainer --version
[2024-05-18 08:45:53] apptainer version 1.1.8-1.el7
[2024-05-18 08:45:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 08:45:54] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0141.triumf.lcg
[2024-05-18 08:45:54] apptainer works
[2024-05-18 08:45:54] Set ATHENA_PROC_NUMBER=12
[2024-05-18 08:45:54] Set ATHENA_CORE_NUMBER=12
[2024-05-18 08:45:54] Starting ATLAS job with PandaID=6208488942
[2024-05-18 08:45:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 16:06:21]  *** The last 200 lines of the pilot log: ***
[2024-05-18 16:06:21] 2024-05-18 23:05:54,250 | INFO     | job 6208488942 has state=finished
[2024-05-18 16:06:21] 2024-05-18 23:05:54,251 | INFO     | preparing for final server update for job 6208488942 in state='finished'
[2024-05-18 16:06:21] 2024-05-18 23:05:54,251 | INFO     | this job has now completed (state=finished)
[2024-05-18 16:06:21] 2024-05-18 23:05:54,252 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-18 16:06:21] 2024-05-18 23:05:54,252 | INFO     | job 6208488942 has finished - writing final server update
[2024-05-18 16:06:21] 2024-05-18 23:05:54,252 | INFO     | total number of processed events: 1950 (read)
[2024-05-18 16:06:21] 2024-05-18 23:05:54,259 | INFO     | executing command: lscpu
[2024-05-18 16:06:21] 2024-05-18 23:05:54,312 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-18 16:06:21] 2024-05-18 23:05:54,313 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 16:06:21] 2024-05-18 23:05:54,372 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 16:06:21] 2024-05-18 23:05:54,696 | INFO     | monitor loop #2017: job 0:6208488942 is in state 'finished'
[2024-05-18 16:06:21] 2024-05-18 23:05:54,696 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 16:06:21] 2024-05-18 23:05:57,199 | INFO     | monitor loop #2018: job 0:6208488942 is in state 'finished'
[2024-05-18 16:06:21] 2024-05-18 23:05:57,200 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 16:06:21] 2024-05-18 23:05:59,523 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-18 16:06:21] 2024-05-18 23:05:59,523 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6208488942/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 16:06:21] 2024-05-18 23:05:59,525 | INFO     | extracted standard info from prmon json
[2024-05-18 16:06:21] 2024-05-18 23:05:59,526 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 16:06:21] 2024-05-18 23:05:59,526 | WARNING  | GPU info not found in prmon json
[2024-05-18 16:06:21] 2024-05-18 23:05:59,535 | INFO     | fitting pss+swap vs Time
[2024-05-18 16:06:21] 2024-05-18 23:05:59,536 | INFO     | model: linear, x: [1716047202.0, 1716047263.0, 1716047324.0, 1716047385.0, 1716047446.0, 1716047507.0, 1716047568.0, 1716047629.0, 1716047690.0, 1716047751.0, 1716
[2024-05-18 16:06:21] 2024-05-18 23:05:59,536 | INFO     | sum of square deviations: 24999570263.518597
[2024-05-18 16:06:21] 2024-05-18 23:05:59,540 | INFO     | sum of deviations: 1166799257411.694
[2024-05-18 16:06:21] 2024-05-18 23:05:59,540 | INFO     | mean x: 1716060347.601852
[2024-05-18 16:06:21] 2024-05-18 23:05:59,540 | INFO     | mean y: 3781786.1319444445
[2024-05-18 16:06:21] 2024-05-18 23:05:59,540 | INFO     | -- intersect: -80089512544.50742
[2024-05-18 16:06:21] 2024-05-18 23:05:59,540 | INFO     | intersect: -80089512544.50742
[2024-05-18 16:06:21] 2024-05-18 23:05:59,541 | INFO     | chi2: 25.40939447762758
[2024-05-18 16:06:21] 2024-05-18 23:05:59,541 | INFO     | model: linear, x: [1716047202.0, 1716047263.0, 1716047324.0, 1716047385.0, 1716047446.0, 1716047507.0, 1716047568.0, 1716047629.0, 1716047690.0, 1716047751.0, 1716
[2024-05-18 16:06:21] 2024-05-18 23:05:59,541 | INFO     | sum of square deviations: 24141558293.465954
[2024-05-18 16:06:21] 2024-05-18 23:05:59,545 | INFO     | sum of deviations: 1363033326322.5896
[2024-05-18 16:06:21] 2024-05-18 23:05:59,545 | INFO     | mean x: 1716060195.1030445
[2024-05-18 16:06:21] 2024-05-18 23:05:59,545 | INFO     | mean y: 3816668.62295082
[2024-05-18 16:06:21] 2024-05-18 23:05:59,545 | INFO     | -- intersect: -96885009125.782
[2024-05-18 16:06:21] 2024-05-18 23:05:59,545 | INFO     | intersect: -96885009125.782
[2024-05-18 16:06:21] 2024-05-18 23:05:59,545 | INFO     | chi2: 21.92149949183131
[2024-05-18 16:06:21] 2024-05-18 23:05:59,545 | INFO     | current chi2=21.92149949183131 (change=13.726793012982998 %)
[2024-05-18 16:06:21] 2024-05-18 23:05:59,545 | INFO     | right removable region: 426
[2024-05-18 16:06:21] 2024-05-18 23:05:59,546 | INFO     | model: linear, x: [1716047507.0, 1716047568.0, 1716047629.0, 1716047690.0, 1716047751.0, 1716047812.0, 1716047873.0, 1716047934.0, 1716047995.0, 1716048056.0, 1716
[2024-05-18 16:06:21] 2024-05-18 23:05:59,546 | INFO     | sum of square deviations: 24141531453.465954
[2024-05-18 16:06:21] 2024-05-18 23:05:59,549 | INFO     | sum of deviations: 952905728148.5264
[2024-05-18 16:06:21] 2024-05-18 23:05:59,549 | INFO     | mean x: 1716060500.1030445
[2024-05-18 16:06:21] 2024-05-18 23:05:59,549 | INFO     | mean y: 3819782.056206089
[2024-05-18 16:06:21] 2024-05-18 23:05:59,550 | INFO     | -- intersect: -67731894646.40219
[2024-05-18 16:06:21] 2024-05-18 23:05:59,550 | INFO     | intersect: -67731894646.40219
[2024-05-18 16:06:21] 2024-05-18 23:05:59,550 | INFO     | chi2: 21.311821789042753
[2024-05-18 16:06:21] 2024-05-18 23:05:59,550 | INFO     | current chi2=21.311821789042753 (change=16.126211477383492 %)
[2024-05-18 16:06:21] 2024-05-18 23:05:59,550 | INFO     | left removable region: 10
[2024-05-18 16:06:21] 2024-05-18 23:05:59,550 | INFO     | model: linear, x: [1716047812.0, 1716047873.0, 1716047934.0, 1716047995.0, 1716048056.0, 1716048117.0, 1716048178.0, 1716048239.0, 1716048300.0, 1716048361.0, 1716
[2024-05-18 16:06:21] 2024-05-18 23:05:59,551 | INFO     | sum of square deviations: 22323460979.346283
[2024-05-18 16:06:21] 2024-05-18 23:05:59,554 | INFO     | sum of deviations: 1001649700627.5469
[2024-05-18 16:06:21] 2024-05-18 23:05:59,554 | INFO     | mean x: 1716060469.6057692
[2024-05-18 16:06:21] 2024-05-18 23:05:59,554 | INFO     | mean y: 3898224.5216346155
[2024-05-18 16:06:21] 2024-05-18 23:05:59,554 | INFO     | -- intersect: -76995428055.11343
[2024-05-18 16:06:21] 2024-05-18 23:05:59,554 | INFO     | intersect: -76995428055.11343
[2024-05-18 16:06:21] 2024-05-18 23:05:59,554 | INFO     | chi2: 14.069810941652394
[2024-05-18 16:06:21] 2024-05-18 23:05:59,555 | INFO     | -- intersect: -76995428055.11343
[2024-05-18 16:06:21] 2024-05-18 23:05:59,555 | INFO     | current memory leak: 44.87 B/s (using 416 data points, chi2=14.07)
[2024-05-18 16:06:21] 2024-05-18 23:05:59,555 | INFO     | ..............................
[2024-05-18 16:06:21] 2024-05-18 23:05:59,555 | INFO     | . Timing measurements:
[2024-05-18 16:06:21] 2024-05-18 23:05:59,555 | INFO     | . get job = 0 s
[2024-05-18 16:06:21] 2024-05-18 23:05:59,556 | INFO     | . initial setup = 2 s
[2024-05-18 16:06:21] 2024-05-18 23:05:59,556 | INFO     | . payload setup = 12 s
[2024-05-18 16:06:21] 2024-05-18 23:05:59,556 | INFO     | . stage-in = 0 s
[2024-05-18 16:06:21] 2024-05-18 23:05:59,556 | INFO     | . payload execution = 26344 s
[2024-05-18 16:06:21] 2024-05-18 23:05:59,556 | INFO     | . stage-out = 3 s
[2024-05-18 16:06:21] 2024-05-18 23:05:59,556 | INFO     | . log creation = 0 s
[2024-05-18 16:06:21] 2024-05-18 23:05:59,556 | INFO     | ..............................
[2024-05-18 16:06:21] 2024-05-18 23:05:59,624 | INFO     | 
[2024-05-18 16:06:21] 2024-05-18 23:05:59,624 | INFO     | job summary report
[2024-05-18 16:06:21] 2024-05-18 23:05:59,624 | INFO     | --------------------------------------------------
[2024-05-18 16:06:21] 2024-05-18 23:05:59,625 | INFO     | PanDA job id: 6208488942
[2024-05-18 16:06:21] 2024-05-18 23:05:59,625 | INFO     | task id: 38734053
[2024-05-18 16:06:21] 2024-05-18 23:05:59,625 | INFO     | errors: (none)
[2024-05-18 16:06:21] 2024-05-18 23:05:59,625 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 16:06:21] 2024-05-18 23:05:59,625 | INFO     | pilot state: finished 
[2024-05-18 16:06:21] 2024-05-18 23:05:59,625 | INFO     | transexitcode: 0
[2024-05-18 16:06:21] 2024-05-18 23:05:59,625 | INFO     | exeerrorcode: 0
[2024-05-18 16:06:21] 2024-05-18 23:05:59,625 | INFO     | exeerrordiag: 
[2024-05-18 16:06:21] 2024-05-18 23:05:59,625 | INFO     | exitcode: 0
[2024-05-18 16:06:21] 2024-05-18 23:05:59,626 | INFO     | exitmsg: OK
[2024-05-18 16:06:21] 2024-05-18 23:05:59,626 | INFO     | cpuconsumptiontime: 260771 s
[2024-05-18 16:06:21] 2024-05-18 23:05:59,626 | INFO     | nevents: 1950
[2024-05-18 16:06:21] 2024-05-18 23:05:59,626 | INFO     | neventsw: 0
[2024-05-18 16:06:21] 2024-05-18 23:05:59,626 | INFO     | pid: 263877
[2024-05-18 16:06:21] 2024-05-18 23:05:59,626 | INFO     | pgrp: 263877
[2024-05-18 16:06:21] 2024-05-18 23:05:59,626 | INFO     | corecount: 12
[2024-05-18 16:06:21] 2024-05-18 23:05:59,626 | INFO     | event service: False
[2024-05-18 16:06:21] 2024-05-18 23:05:59,627 | INFO     | sizes: {0: 2392584, 6: 2392790, 11: 2392818, 26361: 2449620, 26365: 2458574, 26368: 2458630, 26375: 2458980}
[2024-05-18 16:06:21] 2024-05-18 23:05:59,627 | INFO     | --------------------------------------------------
[2024-05-18 16:06:21] 2024-05-18 23:05:59,627 | INFO     | 
[2024-05-18 16:06:21] 2024-05-18 23:05:59,627 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 16:06:21] 2024-05-18 23:05:59,652 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 16:06:21] 2024-05-18 23:05:59,652 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 16:06:21] 2024-05-18 23:05:59,653 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 16:06:21] 2024-05-18 23:05:59,653 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 16:06:21] 2024-05-18 23:05:59,653 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 16:06:21] 2024-05-18 23:05:59,653 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 16:06:21] 2024-05-18 23:05:59,653 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 16:06:21] 2024-05-18 23:05:59,653 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 16:06:21] 2024-05-18 23:05:59,653 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 16:06:21] 2024-05-18 23:05:59,653 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 16:06:21] 2024-05-18 23:05:59,654 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 16:06:21] 2024-05-18 23:05:59,654 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 16:06:21] 2024-05-18 23:05:59,654 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 16:06:21] 2024-05-18 23:05:59,654 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 16:06:21] 2024-05-18 23:05:59,654 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 16:06:21] 2024-05-18 23:05:59,654 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 16:06:21] 2024-05-18 23:05:59,654 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 16:06:21] 2024-05-18 23:05:59,654 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 16:06:21] 2024-05-18 23:05:59,655 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 16:06:21] 2024-05-18 23:05:59,655 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 16:06:21] 2024-05-18 23:05:59,655 | INFO     | job 6208488942 has completed (purged errors)
[2024-05-18 16:06:21] 2024-05-18 23:05:59,655 | INFO     | overall cleanup function is called
[2024-05-18 16:06:21] 2024-05-18 23:06:00,674 | INFO     | --- collectZombieJob: --- 10, [263877]
[2024-05-18 16:06:21] 2024-05-18 23:06:00,675 | INFO     | zombie collector waiting for pid 263877
[2024-05-18 16:06:21] 2024-05-18 23:06:00,675 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 16:06:21] 2024-05-18 23:06:01,680 | INFO     | collected zombie processes
[2024-05-18 16:06:21] 2024-05-18 23:06:01,681 | INFO     | will now attempt to kill all subprocesses of pid=263877
[2024-05-18 16:06:21] 2024-05-18 23:06:01,829 | INFO     | process IDs to be killed: [263877] (in reverse order)
[2024-05-18 16:06:21] 2024-05-18 23:06:01,930 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 16:06:21] 2024-05-18 23:06:01,931 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 16:06:21] 2024-05-18 23:06:01,941 | INFO     | did not find any defunct processes belonging to 263877
[2024-05-18 16:06:21] 2024-05-18 23:06:01,946 | INFO     | did not find any defunct processes belonging to 263877
[2024-05-18 16:06:21] 2024-05-18 23:06:01,946 | INFO     | ready for new job
[2024-05-18 16:06:21] 2024-05-18 23:06:01,946 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 16:06:21] 2024-05-18 23:06:01,949 | INFO     | *************************************
[2024-05-18 16:06:21] 2024-05-18 23:06:01,949 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 16:06:21] 2024-05-18 23:06:01,949 | INFO     | *************************************
[2024-05-18 16:06:21] 2024-05-18 23:06:01,949 | INFO     | 
[2024-05-18 16:06:21] 2024-05-18 23:06:01,952 | INFO     | architecture information:
[2024-05-18 16:06:21] 2024-05-18 23:06:01,952 | INFO     | executing command: cat /etc/os-release
[2024-05-18 16:06:21] 2024-05-18 23:06:01,976 | INFO     | cat /etc/os-release:
[2024-05-18 16:06:21] NAME="CentOS Linux"
[2024-05-18 16:06:21] VERSION="7 (Core)"
[2024-05-18 16:06:21] ID="centos"
[2024-05-18 16:06:21] ID_LIKE="rhel fedora"
[2024-05-18 16:06:21] VERSION_ID="7"
[2024-05-18 16:06:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 16:06:21] ANSI_COLOR="0;31"
[2024-05-18 16:06:21] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 16:06:21] HOME_URL="https://www.centos.org/"
[2024-05-18 16:06:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 16:06:21] 
[2024-05-18 16:06:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 16:06:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 16:06:21] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 16:06:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 16:06:21] 
[2024-05-18 16:06:21] 2024-05-18 23:06:01,977 | INFO     | *************************************
[2024-05-18 16:06:21] 2024-05-18 23:06:02,480 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 16:06:21] 2024-05-18 23:06:02,506 | INFO     | sufficient remaining disk space (1875527073792 B)
[2024-05-18 16:06:21] 2024-05-18 23:06:02,507 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 16:06:21] 2024-05-18 23:06:02,507 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 16:06:21] 2024-05-18 23:06:02,508 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 16:06:21] 2024-05-18 23:06:02,508 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-18 16:06:21] 2024-05-18 23:06:02,509 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 16:06:21] 2024-05-18 23:06:02,509 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 16:06:21] 2024-05-18 23:06:02,509 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 16:06:21] 2024-05-18 23:06:02,644 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 16:06:21] 2024-05-18 23:06:02,956 | INFO     | all data control threads have been joined
[2024-05-18 16:06:21] 2024-05-18 23:06:03,163 | INFO     | all payload control threads have been joined
[2024-05-18 16:06:21] 2024-05-18 23:06:03,216 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 16:06:21] 2024-05-18 23:06:03,217 | INFO     | aborting loop
[2024-05-18 16:06:21] 2024-05-18 23:06:03,513 | INFO     | [job] retrieve thread has finished
[2024-05-18 16:06:21] 2024-05-18 23:06:03,765 | INFO     | [payload] validate_post thread has finished
[2024-05-18 16:06:21] 2024-05-18 23:06:03,962 | INFO     | [data] control thread has finished
[2024-05-18 16:06:21] 2024-05-18 23:06:03,970 | INFO     | [payload] failed_post thread has finished
[2024-05-18 16:06:21] 2024-05-18 23:06:04,026 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 16:06:21] 2024-05-18 23:06:04,045 | INFO     | all job control threads have been joined
[2024-05-18 16:06:21] 2024-05-18 23:06:04,107 | INFO     | [data] copytool_in thread has finished
[2024-05-18 16:06:21] 2024-05-18 23:06:04,168 | INFO     | [payload] control thread has finished
[2024-05-18 16:06:21] 2024-05-18 23:06:04,223 | INFO     | [job] job monitor thread has finished
[2024-05-18 16:06:21] 2024-05-18 23:06:04,297 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 16:06:21] 2024-05-18 23:06:04,514 | INFO     | [data] copytool_out thread has finished
[2024-05-18 16:06:21] 2024-05-18 23:06:04,635 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 16:06:21] 2024-05-18 23:06:04,650 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 16:06:21] 2024-05-18 23:06:04,821 | INFO     | [job] validate thread has finished
[2024-05-18 16:06:21] 2024-05-18 23:06:05,051 | INFO     | [job] control thread has finished
[2024-05-18 16:06:21] 2024-05-18 23:06:05,641 | INFO     | [job] queue monitor thread has finished
[2024-05-18 16:06:21] 2024-05-18 23:06:06,651 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 16:06:21] 2024-05-18 23:06:13,554 | INFO     | job.realtimelogging is not enabled
[2024-05-18 16:06:21] 2024-05-18 23:06:14,556 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 16:06:21] 2024-05-18 23:06:15,166 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140064916997952)>', '<ExcThread(monitor, started 140064495486720)>']
[2024-05-18 16:06:21] 2024-05-18 23:06:15,574 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 16:06:21] 2024-05-18 23:06:15,574 | INFO     | [monitor] control thread has ended
[2024-05-18 16:06:21] 2024-05-18 23:06:20,192 | INFO     | all workflow threads have been joined
[2024-05-18 16:06:21] 2024-05-18 23:06:20,192 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 16:06:21] 2024-05-18 23:06:20,193 | INFO     | traces error code: 0
[2024-05-18 16:06:21] 2024-05-18 23:06:20,193 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 16:06:21] 2024-05-18 23:06:20,288 [wrapper] ==== pilot stdout END ====
[2024-05-18 16:06:21] 2024-05-18 23:06:20,293 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 16:06:21] 2024-05-18 23:06:20,298 [wrapper] pilotpid: 256610
[2024-05-18 16:06:21] 2024-05-18 23:06:20,302 [wrapper] Pilot exit status: 0
[2024-05-18 16:06:21] 2024-05-18 23:06:20,318 [wrapper] pandaids: 6208488942
[2024-05-18 16:06:21] 2024-05-18 23:06:20,389 [wrapper] cleanup: SIGTERM to supervisor_pilot 274245 256611
[2024-05-18 16:06:21] 2024-05-18 23:06:20,393 [wrapper] Test setup, not cleaning
[2024-05-18 16:06:21] 2024-05-18 23:06:20,398 [wrapper] ==== wrapper stdout END ====
[2024-05-18 16:06:21] 2024-05-18 23:06:20,403 [wrapper] ==== wrapper stderr END ====
[2024-05-18 16:06:21] 2024-05-18 23:06:20,411 [wrapper] apfmon messages muted
[2024-05-18 16:06:21]  *** Error codes and diagnostics ***
[2024-05-18 16:06:21]     "exeErrorCode": 0,
[2024-05-18 16:06:21]     "exeErrorDiag": "",
[2024-05-18 16:06:21]     "pilotErrorCode": 0,
[2024-05-18 16:06:21]     "pilotErrorDiag": "",
[2024-05-18 16:06:21]  *** Listing of results directory ***
[2024-05-18 16:06:21] total 1502696
[2024-05-18 16:06:21] -rw-r--r-- 1 boinc boinc     467845 May 17 19:34 pilot3.tar.gz
[2024-05-18 16:06:21] -rw-r--r-- 1 boinc boinc       5633 May 17 19:36 queuedata.json
[2024-05-18 16:06:21] -rwx------ 1 boinc boinc      32251 May 17 19:37 runpilot2-wrapper.sh
[2024-05-18 16:06:21] -rw-r--r-- 1 boinc boinc        100 May 18 08:45 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 16:06:21] -rwxr-xr-x 1 boinc boinc       7986 May 18 08:45 run_atlas
[2024-05-18 16:06:21] -rw-r--r-- 1 boinc boinc        105 May 18 08:45 job.xml
[2024-05-18 16:06:21] -rw-r--r-- 2 boinc boinc  330310227 May 18 08:45 EVNT.38734051._000128.pool.root.1
[2024-05-18 16:06:21] -rw-r--r-- 1 boinc boinc       6622 May 18 08:45 init_data.xml
[2024-05-18 16:06:21] drwxrwx--x 2 boinc boinc       4096 May 18 08:45 shared
[2024-05-18 16:06:21] -rw-r--r-- 2 boinc boinc     480170 May 18 08:45 input.tar.gz
[2024-05-18 16:06:21] -rw-r--r-- 2 boinc boinc      17537 May 18 08:45 start_atlas.sh
[2024-05-18 16:06:21] -rw-r--r-- 1 boinc boinc          0 May 18 08:45 boinc_lockfile
[2024-05-18 16:06:21] -rw-r--r-- 1 boinc boinc       2851 May 18 08:45 pandaJob.out
[2024-05-18 16:06:21] -rw------- 1 boinc boinc        424 May 18 08:45 setup.sh.local
[2024-05-18 16:06:21] -rw------- 1 boinc boinc    1019426 May 18 08:46 agis_schedconf.cvmfs.json
[2024-05-18 16:06:21] -rw------- 1 boinc boinc    1324701 May 18 08:46 cric_ddmendpoints.json
[2024-05-18 16:06:21] drwx------ 4 boinc boinc       4096 May 18 08:46 pilot3
[2024-05-18 16:06:21] -rw-r--r-- 1 boinc boinc        533 May 18 15:52 boinc_task_state.xml
[2024-05-18 16:06:21] -rw------- 1 boinc boinc         95 May 18 16:05 pilot_heartbeat.json
[2024-05-18 16:06:21] -rw------- 1 boinc boinc 1194546194 May 18 16:05 HITS.38734053._008413.pool.root.1
[2024-05-18 16:06:21] -rw------- 1 boinc boinc       1077 May 18 16:05 memory_monitor_summary.json
[2024-05-18 16:06:21] -rw------- 1 boinc boinc          0 May 18 16:05 agis_ddmendpoints.agis.ALL.json
[2024-05-18 16:06:21] -rw------- 1 boinc boinc    2447234 May 18 16:05 log.38734053._008413.job.log.tgz.1
[2024-05-18 16:06:21] -rw------- 1 boinc boinc      28357 May 18 16:05 heartbeat.json
[2024-05-18 16:06:21] -rw-r--r-- 1 boinc boinc         29 May 18 16:06 wrapper_checkpoint.txt
[2024-05-18 16:06:21] -rw-r--r-- 1 boinc boinc       8192 May 18 16:06 boinc_mmap_file
[2024-05-18 16:06:21] -rw------- 1 boinc boinc       4405 May 18 16:06 pilotlog.txt
[2024-05-18 16:06:21] -rw------- 1 boinc boinc    2716388 May 18 16:06 log.38734053._008413.job.log.1
[2024-05-18 16:06:21] -rw------- 1 boinc boinc        353 May 18 16:06 output.list
[2024-05-18 16:06:21] -rw-r--r-- 1 boinc boinc        620 May 18 16:06 runtime_log
[2024-05-18 16:06:21] -rw------- 1 boinc boinc    5201920 May 18 16:06 result.tar.gz
[2024-05-18 16:06:21] -rw-r--r-- 1 boinc boinc      11287 May 18 16:06 runtime_log.err
[2024-05-18 16:06:21] -rw------- 1 boinc boinc        664 May 18 16:06 JVtLDmI8OS5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmgeLKDmKiBBZm.diag
[2024-05-18 16:06:21] -rw-r--r-- 1 boinc boinc      22162 May 18 16:06 stderr.txt
[2024-05-18 16:06:21] HITS file was successfully produced:
[2024-05-18 16:06:21] -rw------- 1 boinc boinc 1194546194 May 18 16:05 shared/HITS.pool.root.1
[2024-05-18 16:06:21]  *** Contents of shared directory: ***
[2024-05-18 16:06:21] total 1494704
[2024-05-18 16:06:21] -rw-r--r-- 2 boinc boinc  330310227 May 18 08:45 ATLAS.root_0
[2024-05-18 16:06:21] -rw-r--r-- 2 boinc boinc     480170 May 18 08:45 input.tar.gz
[2024-05-18 16:06:21] -rw-r--r-- 2 boinc boinc      17537 May 18 08:45 start_atlas.sh
[2024-05-18 16:06:21] -rw------- 1 boinc boinc 1194546194 May 18 16:05 HITS.pool.root.1
[2024-05-18 16:06:21] -rw------- 1 boinc boinc    5201920 May 18 16:06 result.tar.gz
16:06:22 (252357): run_atlas exited; CPU time 255525.087573
16:06:22 (252357): called boinc_finish(0)

</stderr_txt>
]]>

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