Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
04:02:40 (55478): wrapper (7.7.26015): starting
04:02:40 (55478): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 04:02:40] Arguments: --nthreads 12
[2024-05-18 04:02:40] Threads: 12
[2024-05-18 04:02:40] Checking for CVMFS
[2024-05-18 04:02:40] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 04:02:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 04:02:40] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 04:02:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 04:02:40] 2.10.1.0 2803 173574 189816 132876 3 195 24626941 45568000 11998 130560 0 1099302368 99.778 649102845 18243 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-05-18 04:02:40] CVMFS is ok
[2024-05-18 04:02:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 04:02:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 04:02:40] Further information can be found at the LHC@home message board.
[2024-05-18 04:02:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 04:02:40] Checking for apptainer binary...
[2024-05-18 04:02:40] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 04:02:40] Running /usr/bin/apptainer --version
[2024-05-18 04:02:40] apptainer version 1.1.8-1.el7
[2024-05-18 04:02:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 04:02:41] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0137.triumf.lcg
[2024-05-18 04:02:41] apptainer works
[2024-05-18 04:02:41] Set ATHENA_PROC_NUMBER=12
[2024-05-18 04:02:41] Set ATHENA_CORE_NUMBER=12
[2024-05-18 04:02:41] Starting ATLAS job with PandaID=6208480296
[2024-05-18 04:02:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 07:00:11]  *** The last 200 lines of the pilot log: ***
[2024-05-18 07:00:11] 2024-05-18 13:59:48,164 | INFO     | chi2: 5.65895744383388
[2024-05-18 07:00:11] 2024-05-18 13:59:48,165 | INFO     | model: linear, x: [1716030197.0, 1716030258.0, 1716030319.0, 1716030380.0, 1716030441.0, 1716030502.0, 1716030563.0, 1716030624.0, 1716030685.0, 1716030746.0, 1716
[2024-05-18 07:00:11] 2024-05-18 13:59:48,165 | INFO     | sum of square deviations: 1496660620.0
[2024-05-18 07:00:11] 2024-05-18 13:59:48,166 | INFO     | sum of deviations: 117827980884.00002
[2024-05-18 07:00:11] 2024-05-18 13:59:48,166 | INFO     | mean x: 1716035321.0
[2024-05-18 07:00:11] 2024-05-18 13:59:48,166 | INFO     | mean y: 2620232.6272189347
[2024-05-18 07:00:11] 2024-05-18 13:59:48,166 | INFO     | -- intersect: -135096128473.04584
[2024-05-18 07:00:11] 2024-05-18 13:59:48,166 | INFO     | intersect: -135096128473.04584
[2024-05-18 07:00:11] 2024-05-18 13:59:48,167 | INFO     | chi2: 4.861377531861802
[2024-05-18 07:00:11] 2024-05-18 13:59:48,167 | INFO     | current chi2=4.861377531861802 (change=14.09411397573131 %)
[2024-05-18 07:00:11] 2024-05-18 13:59:48,167 | INFO     | right removable region: 168
[2024-05-18 07:00:11] 2024-05-18 13:59:48,167 | INFO     | model: linear, x: [1716030502.0, 1716030563.0, 1716030624.0, 1716030685.0, 1716030746.0, 1716030807.0, 1716030868.0, 1716030929.0, 1716030990.0, 1716031051.0, 1716
[2024-05-18 07:00:11] 2024-05-18 13:59:48,168 | INFO     | sum of square deviations: 1496660620.0
[2024-05-18 07:00:11] 2024-05-18 13:59:48,169 | INFO     | sum of deviations: 61427195932.00002
[2024-05-18 07:00:11] 2024-05-18 13:59:48,169 | INFO     | mean x: 1716035626.0
[2024-05-18 07:00:11] 2024-05-18 13:59:48,169 | INFO     | mean y: 2662958.7928994084
[2024-05-18 07:00:11] 2024-05-18 13:59:48,169 | INFO     | -- intersect: -70428305302.13075
[2024-05-18 07:00:11] 2024-05-18 13:59:48,169 | INFO     | intersect: -70428305302.13075
[2024-05-18 07:00:11] 2024-05-18 13:59:48,170 | INFO     | chi2: 3.1134410808558637
[2024-05-18 07:00:11] 2024-05-18 13:59:48,170 | INFO     | current chi2=3.1134410808558637 (change=44.98207290375836 %)
[2024-05-18 07:00:11] 2024-05-18 13:59:48,170 | INFO     | model: linear, x: [1716030807.0, 1716030868.0, 1716030929.0, 1716030990.0, 1716031051.0, 1716031112.0, 1716031173.0, 1716031234.0, 1716031295.0, 1716031356.0, 1716
[2024-05-18 07:00:11] 2024-05-18 13:59:48,170 | INFO     | sum of square deviations: 1367709365.0
[2024-05-18 07:00:11] 2024-05-18 13:59:48,171 | INFO     | sum of deviations: 25200634516.00002
[2024-05-18 07:00:11] 2024-05-18 13:59:48,172 | INFO     | mean x: 1716035778.5
[2024-05-18 07:00:11] 2024-05-18 13:59:48,172 | INFO     | mean y: 2705808.1097560977
[2024-05-18 07:00:11] 2024-05-18 13:59:48,172 | INFO     | -- intersect: -31615993001.017773
[2024-05-18 07:00:11] 2024-05-18 13:59:48,172 | INFO     | intersect: -31615993001.017773
[2024-05-18 07:00:11] 2024-05-18 13:59:48,172 | INFO     | chi2: 1.7442933260337359
[2024-05-18 07:00:11] 2024-05-18 13:59:48,172 | INFO     | current chi2=1.7442933260337359 (change=43.97538669483215 %)
[2024-05-18 07:00:11] 2024-05-18 13:59:48,173 | INFO     | model: linear, x: [1716031112.0, 1716031173.0, 1716031234.0, 1716031295.0, 1716031356.0, 1716031417.0, 1716031478.0, 1716031539.0, 1716031600.0, 1716031661.0, 1716
[2024-05-18 07:00:11] 2024-05-18 13:59:48,173 | INFO     | sum of square deviations: 1246386160.0
[2024-05-18 07:00:11] 2024-05-18 13:59:48,174 | INFO     | sum of deviations: -129219044.99999619
[2024-05-18 07:00:11] 2024-05-18 13:59:48,174 | INFO     | mean x: 1716035931.0
[2024-05-18 07:00:11] 2024-05-18 13:59:48,174 | INFO     | mean y: 2737457.389937107
[2024-05-18 07:00:11] 2024-05-18 13:59:48,174 | INFO     | -- intersect: 180647427.2739892
[2024-05-18 07:00:11] 2024-05-18 13:59:48,174 | INFO     | intersect: 180647427.2739892
[2024-05-18 07:00:11] 2024-05-18 13:59:48,175 | INFO     | chi2: 0.9704664787235466
[2024-05-18 07:00:11] 2024-05-18 13:59:48,175 | INFO     | current chi2=0.9704664787235466 (change=44.363343926205154 %)
[2024-05-18 07:00:11] 2024-05-18 13:59:48,175 | INFO     | model: linear, x: [1716031417.0, 1716031478.0, 1716031539.0, 1716031600.0, 1716031661.0, 1716031722.0, 1716031783.0, 1716031844.0, 1716031905.0, 1716031966.0, 1716
[2024-05-18 07:00:11] 2024-05-18 13:59:48,175 | INFO     | sum of square deviations: 1132458442.5
[2024-05-18 07:00:11] 2024-05-18 13:59:48,176 | INFO     | sum of deviations: -10082880594.5
[2024-05-18 07:00:11] 2024-05-18 13:59:48,176 | INFO     | mean x: 1716036083.5
[2024-05-18 07:00:11] 2024-05-18 13:59:48,177 | INFO     | mean y: 2750653.214285714
[2024-05-18 07:00:11] 2024-05-18 13:59:48,177 | INFO     | -- intersect: 15281533764.74902
[2024-05-18 07:00:11] 2024-05-18 13:59:48,177 | INFO     | intersect: 15281533764.74902
[2024-05-18 07:00:11] 2024-05-18 13:59:48,177 | INFO     | chi2: 0.8151625469507674
[2024-05-18 07:00:11] 2024-05-18 13:59:48,177 | INFO     | current chi2=0.8151625469507674 (change=16.003018669645375 %)
[2024-05-18 07:00:11] 2024-05-18 13:59:48,177 | INFO     | left removable region: 40
[2024-05-18 07:00:11] 2024-05-18 13:59:48,178 | INFO     | model: linear, x: [1716032637.0, 1716032698.0, 1716032759.0, 1716032820.0, 1716032881.0, 1716032942.0, 1716033003.0, 1716033064.0, 1716033125.0, 1716033186.0, 1716
[2024-05-18 07:00:11] 2024-05-18 13:59:48,178 | INFO     | sum of square deviations: 650252192.0
[2024-05-18 07:00:11] 2024-05-18 13:59:48,178 | INFO     | sum of deviations: -448738936.0
[2024-05-18 07:00:11] 2024-05-18 13:59:48,179 | INFO     | mean x: 1716036510.5
[2024-05-18 07:00:11] 2024-05-18 13:59:48,179 | INFO     | mean y: 2769255.734375
[2024-05-18 07:00:11] 2024-05-18 13:59:48,179 | INFO     | -- intersect: 1187005783.2429557
[2024-05-18 07:00:11] 2024-05-18 13:59:48,179 | INFO     | intersect: 1187005783.2429557
[2024-05-18 07:00:11] 2024-05-18 13:59:48,179 | INFO     | chi2: 0.0028667513529555618
[2024-05-18 07:00:11] 2024-05-18 13:59:48,179 | INFO     | -- intersect: 1187005783.2429557
[2024-05-18 07:00:11] 2024-05-18 13:59:48,180 | INFO     | current memory leak: -0.69 B/s (using 128 data points, chi2=0.00)
[2024-05-18 07:00:11] 2024-05-18 13:59:48,180 | INFO     | ..............................
[2024-05-18 07:00:11] 2024-05-18 13:59:48,180 | INFO     | . Timing measurements:
[2024-05-18 07:00:11] 2024-05-18 13:59:48,180 | INFO     | . get job = 0 s
[2024-05-18 07:00:11] 2024-05-18 13:59:48,180 | INFO     | . initial setup = 2 s
[2024-05-18 07:00:11] 2024-05-18 13:59:48,181 | INFO     | . payload setup = 5 s
[2024-05-18 07:00:11] 2024-05-18 13:59:48,181 | INFO     | . stage-in = 0 s
[2024-05-18 07:00:11] 2024-05-18 13:59:48,181 | INFO     | . payload execution = 10581 s
[2024-05-18 07:00:11] 2024-05-18 13:59:48,181 | INFO     | . stage-out = 0 s
[2024-05-18 07:00:11] 2024-05-18 13:59:48,181 | INFO     | . log creation = 0 s
[2024-05-18 07:00:11] 2024-05-18 13:59:48,181 | INFO     | ..............................
[2024-05-18 07:00:11] 2024-05-18 13:59:48,489 | INFO     | 
[2024-05-18 07:00:11] 2024-05-18 13:59:48,489 | INFO     | job summary report
[2024-05-18 07:00:11] 2024-05-18 13:59:48,490 | INFO     | --------------------------------------------------
[2024-05-18 07:00:11] 2024-05-18 13:59:48,490 | INFO     | PanDA job id: 6208480296
[2024-05-18 07:00:11] 2024-05-18 13:59:48,490 | INFO     | task id: 38921013
[2024-05-18 07:00:11] 2024-05-18 13:59:48,490 | INFO     | errors: (none)
[2024-05-18 07:00:11] 2024-05-18 13:59:48,490 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 07:00:11] 2024-05-18 13:59:48,491 | INFO     | pilot state: finished 
[2024-05-18 07:00:11] 2024-05-18 13:59:48,491 | INFO     | transexitcode: 0
[2024-05-18 07:00:11] 2024-05-18 13:59:48,491 | INFO     | exeerrorcode: 0
[2024-05-18 07:00:11] 2024-05-18 13:59:48,491 | INFO     | exeerrordiag: 
[2024-05-18 07:00:11] 2024-05-18 13:59:48,491 | INFO     | exitcode: 0
[2024-05-18 07:00:11] 2024-05-18 13:59:48,491 | INFO     | exitmsg: OK
[2024-05-18 07:00:11] 2024-05-18 13:59:48,491 | INFO     | cpuconsumptiontime: 112966 s
[2024-05-18 07:00:11] 2024-05-18 13:59:48,491 | INFO     | nevents: 400
[2024-05-18 07:00:11] 2024-05-18 13:59:48,492 | INFO     | neventsw: 0
[2024-05-18 07:00:11] 2024-05-18 13:59:48,492 | INFO     | pid: 68725
[2024-05-18 07:00:11] 2024-05-18 13:59:48,492 | INFO     | pgrp: 68725
[2024-05-18 07:00:11] 2024-05-18 13:59:48,492 | INFO     | corecount: 12
[2024-05-18 07:00:11] 2024-05-18 13:59:48,492 | INFO     | event service: False
[2024-05-18 07:00:11] 2024-05-18 13:59:48,492 | INFO     | sizes: {0: 2390653, 1: 2392186, 5: 2392392, 12: 2392448, 10591: 2421441, 10593: 2430395, 10597: 2430579, 10601: 2430749}
[2024-05-18 07:00:11] 2024-05-18 13:59:48,492 | INFO     | --------------------------------------------------
[2024-05-18 07:00:11] 2024-05-18 13:59:48,492 | INFO     | 
[2024-05-18 07:00:11] 2024-05-18 13:59:48,492 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 07:00:11] 2024-05-18 13:59:48,524 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 07:00:11] 2024-05-18 13:59:48,525 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 07:00:11] 2024-05-18 13:59:48,525 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 07:00:11] 2024-05-18 13:59:48,525 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 07:00:11] 2024-05-18 13:59:48,525 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 07:00:11] 2024-05-18 13:59:48,525 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 07:00:11] 2024-05-18 13:59:48,525 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 07:00:11] 2024-05-18 13:59:48,525 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 07:00:11] 2024-05-18 13:59:48,525 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 07:00:11] 2024-05-18 13:59:48,526 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 07:00:11] 2024-05-18 13:59:48,526 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 07:00:11] 2024-05-18 13:59:48,526 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 07:00:11] 2024-05-18 13:59:48,526 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 07:00:11] 2024-05-18 13:59:48,526 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 07:00:11] 2024-05-18 13:59:48,526 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 07:00:11] 2024-05-18 13:59:48,526 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 07:00:11] 2024-05-18 13:59:48,526 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 07:00:11] 2024-05-18 13:59:48,526 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 07:00:11] 2024-05-18 13:59:48,526 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 07:00:11] 2024-05-18 13:59:48,527 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 07:00:11] 2024-05-18 13:59:48,527 | INFO     | job 6208480296 has completed (purged errors)
[2024-05-18 07:00:11] 2024-05-18 13:59:48,527 | INFO     | overall cleanup function is called
[2024-05-18 07:00:11] 2024-05-18 13:59:49,536 | INFO     | --- collectZombieJob: --- 10, [68725]
[2024-05-18 07:00:11] 2024-05-18 13:59:49,537 | INFO     | zombie collector waiting for pid 68725
[2024-05-18 07:00:11] 2024-05-18 13:59:49,537 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 07:00:11] 2024-05-18 13:59:50,542 | INFO     | collected zombie processes
[2024-05-18 07:00:11] 2024-05-18 13:59:50,543 | INFO     | will now attempt to kill all subprocesses of pid=68725
[2024-05-18 07:00:11] 2024-05-18 13:59:50,728 | INFO     | process IDs to be killed: [68725] (in reverse order)
[2024-05-18 07:00:11] 2024-05-18 13:59:50,852 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 07:00:11] 2024-05-18 13:59:50,852 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 07:00:11] 2024-05-18 13:59:50,859 | INFO     | did not find any defunct processes belonging to 68725
[2024-05-18 07:00:11] 2024-05-18 13:59:50,866 | INFO     | did not find any defunct processes belonging to 68725
[2024-05-18 07:00:11] 2024-05-18 13:59:50,866 | INFO     | ready for new job
[2024-05-18 07:00:11] 2024-05-18 13:59:50,866 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 07:00:11] 2024-05-18 13:59:50,867 | INFO     | *************************************
[2024-05-18 07:00:11] 2024-05-18 13:59:50,868 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 07:00:11] 2024-05-18 13:59:50,868 | INFO     | *************************************
[2024-05-18 07:00:11] 2024-05-18 13:59:50,868 | INFO     | 
[2024-05-18 07:00:11] 2024-05-18 13:59:50,870 | INFO     | architecture information:
[2024-05-18 07:00:11] 2024-05-18 13:59:50,870 | INFO     | executing command: cat /etc/os-release
[2024-05-18 07:00:11] 2024-05-18 13:59:50,884 | INFO     | cat /etc/os-release:
[2024-05-18 07:00:11] NAME="CentOS Linux"
[2024-05-18 07:00:11] VERSION="7 (Core)"
[2024-05-18 07:00:11] ID="centos"
[2024-05-18 07:00:11] ID_LIKE="rhel fedora"
[2024-05-18 07:00:11] VERSION_ID="7"
[2024-05-18 07:00:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 07:00:11] ANSI_COLOR="0;31"
[2024-05-18 07:00:11] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 07:00:11] HOME_URL="https://www.centos.org/"
[2024-05-18 07:00:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 07:00:11] 
[2024-05-18 07:00:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 07:00:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 07:00:11] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 07:00:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 07:00:11] 
[2024-05-18 07:00:11] 2024-05-18 13:59:50,884 | INFO     | *************************************
[2024-05-18 07:00:11] 2024-05-18 13:59:51,388 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 07:00:11] 2024-05-18 13:59:51,413 | INFO     | sufficient remaining disk space (2010471464960 B)
[2024-05-18 07:00:11] 2024-05-18 13:59:51,414 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 07:00:11] 2024-05-18 13:59:51,414 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 07:00:11] 2024-05-18 13:59:51,415 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 07:00:11] 2024-05-18 13:59:51,415 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-18 07:00:11] 2024-05-18 13:59:51,416 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 07:00:11] 2024-05-18 13:59:51,416 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 07:00:11] 2024-05-18 13:59:51,416 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 07:00:11] 2024-05-18 13:59:51,694 | INFO     | all data control threads have been joined
[2024-05-18 07:00:11] 2024-05-18 13:59:52,071 | INFO     | all payload control threads have been joined
[2024-05-18 07:00:11] 2024-05-18 13:59:52,376 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 07:00:11] 2024-05-18 13:59:52,377 | INFO     | aborting loop
[2024-05-18 07:00:11] 2024-05-18 13:59:52,417 | INFO     | all job control threads have been joined
[2024-05-18 07:00:11] 2024-05-18 13:59:52,420 | INFO     | [job] retrieve thread has finished
[2024-05-18 07:00:11] 2024-05-18 13:59:52,519 | INFO     | [job] validate thread has finished
[2024-05-18 07:00:11] 2024-05-18 13:59:52,699 | INFO     | [data] control thread has finished
[2024-05-18 07:00:11] 2024-05-18 13:59:53,010 | INFO     | [payload] failed_post thread has finished
[2024-05-18 07:00:11] 2024-05-18 13:59:53,037 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 07:00:11] 2024-05-18 13:59:53,076 | INFO     | [payload] control thread has finished
[2024-05-18 07:00:11] 2024-05-18 13:59:53,274 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 07:00:11] 2024-05-18 13:59:53,382 | INFO     | [job] job monitor thread has finished
[2024-05-18 07:00:11] 2024-05-18 13:59:53,421 | INFO     | [data] copytool_out thread has finished
[2024-05-18 07:00:11] 2024-05-18 13:59:53,423 | INFO     | [job] control thread has finished
[2024-05-18 07:00:11] 2024-05-18 13:59:53,615 | INFO     | [payload] validate_post thread has finished
[2024-05-18 07:00:11] 2024-05-18 13:59:53,680 | INFO     | [data] copytool_in thread has finished
[2024-05-18 07:00:11] 2024-05-18 13:59:53,759 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 07:00:11] 2024-05-18 13:59:53,877 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 07:00:11] 2024-05-18 13:59:54,279 | INFO     | [job] queue monitor thread has finished
[2024-05-18 07:00:11] 2024-05-18 13:59:54,505 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 07:00:11] 2024-05-18 13:59:58,512 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 07:00:11] 2024-05-18 14:00:02,461 | INFO     | job.realtimelogging is not enabled
[2024-05-18 07:00:11] 2024-05-18 14:00:03,466 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 07:00:11] 2024-05-18 14:00:05,305 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140267179317056)>', '<ExcThread(monitor, started 140266761602816)>']
[2024-05-18 07:00:11] 2024-05-18 14:00:05,485 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 07:00:11] 2024-05-18 14:00:05,485 | INFO     | [monitor] control thread has ended
[2024-05-18 07:00:11] 2024-05-18 14:00:10,331 | INFO     | all workflow threads have been joined
[2024-05-18 07:00:11] 2024-05-18 14:00:10,331 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 07:00:11] 2024-05-18 14:00:10,331 | INFO     | traces error code: 0
[2024-05-18 07:00:11] 2024-05-18 14:00:10,332 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 07:00:11] 2024-05-18 14:00:10,433 [wrapper] ==== pilot stdout END ====
[2024-05-18 07:00:11] 2024-05-18 14:00:10,437 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 07:00:11] 2024-05-18 14:00:10,440 [wrapper] pilotpid: 60947
[2024-05-18 07:00:11] 2024-05-18 14:00:10,443 [wrapper] Pilot exit status: 0
[2024-05-18 07:00:11] 2024-05-18 14:00:10,460 [wrapper] pandaids: 6208480296
[2024-05-18 07:00:11] 2024-05-18 14:00:10,521 [wrapper] cleanup: SIGTERM to supervisor_pilot 129901 60948
[2024-05-18 07:00:11] 2024-05-18 14:00:10,526 [wrapper] Test setup, not cleaning
[2024-05-18 07:00:11] 2024-05-18 14:00:10,530 [wrapper] ==== wrapper stdout END ====
[2024-05-18 07:00:11] 2024-05-18 14:00:10,533 [wrapper] ==== wrapper stderr END ====
[2024-05-18 07:00:11] 2024-05-18 14:00:10,541 [wrapper] apfmon messages muted
[2024-05-18 07:00:11]  *** Error codes and diagnostics ***
[2024-05-18 07:00:11]     "exeErrorCode": 0,
[2024-05-18 07:00:11]     "exeErrorDiag": "",
[2024-05-18 07:00:11]     "pilotErrorCode": 0,
[2024-05-18 07:00:11]     "pilotErrorDiag": "",
[2024-05-18 07:00:11]  *** Listing of results directory ***
[2024-05-18 07:00:11] total 878004
[2024-05-18 07:00:11] -rwx------ 1 boinc boinc     32251 May 17 19:34 runpilot2-wrapper.sh
[2024-05-18 07:00:11] -rw-r--r-- 1 boinc boinc      5633 May 17 19:34 queuedata.json
[2024-05-18 07:00:11] -rw-r--r-- 1 boinc boinc    467845 May 17 19:34 pilot3.tar.gz
[2024-05-18 07:00:11] -rw-r--r-- 1 boinc boinc       100 May 18 04:02 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 07:00:11] -rwxr-xr-x 1 boinc boinc      7986 May 18 04:02 run_atlas
[2024-05-18 07:00:11] -rw-r--r-- 1 boinc boinc       105 May 18 04:02 job.xml
[2024-05-18 07:00:11] -rw-r--r-- 2 boinc boinc 544769552 May 18 04:02 EVNT.38776210._000093.pool.root.1
[2024-05-18 07:00:11] -rw-r--r-- 1 boinc boinc      6626 May 18 04:02 init_data.xml
[2024-05-18 07:00:11] -rw-r--r-- 2 boinc boinc     17537 May 18 04:02 start_atlas.sh
[2024-05-18 07:00:11] drwxrwx--x 2 boinc boinc      4096 May 18 04:02 shared
[2024-05-18 07:00:11] -rw-r--r-- 2 boinc boinc    479988 May 18 04:02 input.tar.gz
[2024-05-18 07:00:11] -rw-r--r-- 1 boinc boinc         0 May 18 04:02 boinc_lockfile
[2024-05-18 07:00:11] -rw-r--r-- 1 boinc boinc      2643 May 18 04:02 pandaJob.out
[2024-05-18 07:00:11] -rw------- 1 boinc boinc       424 May 18 04:02 setup.sh.local
[2024-05-18 07:00:11] -rw------- 1 boinc boinc   1019073 May 18 04:02 agis_schedconf.cvmfs.json
[2024-05-18 07:00:11] -rw------- 1 boinc boinc         0 May 18 04:02 agis_ddmendpoints.agis.ALL.json
[2024-05-18 07:00:11] -rw------- 1 boinc boinc   1324701 May 18 04:02 cric_ddmendpoints.json
[2024-05-18 07:00:11] drwx------ 4 boinc boinc      4096 May 18 04:02 pilot3
[2024-05-18 07:00:11] -rw------- 1 boinc boinc 347797577 May 18 06:58 HITS.38921013._002115.pool.root.1
[2024-05-18 07:00:11] -rw-r--r-- 1 boinc boinc       532 May 18 06:59 boinc_task_state.xml
[2024-05-18 07:00:11] -rw------- 1 boinc boinc        95 May 18 06:59 pilot_heartbeat.json
[2024-05-18 07:00:11] -rw------- 1 boinc boinc      1078 May 18 06:59 memory_monitor_summary.json
[2024-05-18 07:00:11] -rw------- 1 boinc boinc    419286 May 18 06:59 log.38921013._002115.job.log.tgz.1
[2024-05-18 07:00:11] -rw------- 1 boinc boinc      7788 May 18 06:59 heartbeat.json
[2024-05-18 07:00:11] -rw------- 1 boinc boinc      4405 May 18 07:00 pilotlog.txt
[2024-05-18 07:00:11] -rw------- 1 boinc boinc   1065674 May 18 07:00 log.38921013._002115.job.log.1
[2024-05-18 07:00:11] -rw------- 1 boinc boinc       357 May 18 07:00 output.list
[2024-05-18 07:00:11] -rw-r--r-- 1 boinc boinc       620 May 18 07:00 runtime_log
[2024-05-18 07:00:11] -rw------- 1 boinc boinc   1505280 May 18 07:00 result.tar.gz
[2024-05-18 07:00:11] -rw-r--r-- 1 boinc boinc     11287 May 18 07:00 runtime_log.err
[2024-05-18 07:00:11] -rw------- 1 boinc boinc       659 May 18 07:00 jsUKDmx4OS5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmceLKDmVcufGo.diag
[2024-05-18 07:00:11] -rw-r--r-- 1 boinc boinc        29 May 18 07:00 wrapper_checkpoint.txt
[2024-05-18 07:00:11] -rw-r--r-- 1 boinc boinc      8192 May 18 07:00 boinc_mmap_file
[2024-05-18 07:00:11] -rw-r--r-- 1 boinc boinc     21873 May 18 07:00 stderr.txt
[2024-05-18 07:00:11] HITS file was successfully produced:
[2024-05-18 07:00:11] -rw------- 1 boinc boinc 347797577 May 18 06:58 shared/HITS.pool.root.1
[2024-05-18 07:00:11]  *** Contents of shared directory: ***
[2024-05-18 07:00:11] total 873624
[2024-05-18 07:00:11] -rw-r--r-- 2 boinc boinc 544769552 May 18 04:02 ATLAS.root_0
[2024-05-18 07:00:11] -rw-r--r-- 2 boinc boinc     17537 May 18 04:02 start_atlas.sh
[2024-05-18 07:00:11] -rw-r--r-- 2 boinc boinc    479988 May 18 04:02 input.tar.gz
[2024-05-18 07:00:11] -rw------- 1 boinc boinc 347797577 May 18 06:58 HITS.pool.root.1
[2024-05-18 07:00:11] -rw------- 1 boinc boinc   1505280 May 18 07:00 result.tar.gz
07:00:12 (55478): run_atlas exited; CPU time 112586.283661
07:00:12 (55478): called boinc_finish(0)

</stderr_txt>
]]>

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