Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:01:37 (1654325): wrapper (7.7.26015): starting
03:01:37 (1654325): wrapper: running run_atlas (--nthreads 4)
[2024-05-23 03:01:37] Arguments: --nthreads 4
[2024-05-23 03:01:37] Threads: 4
[2024-05-23 03:01:37] Checking for CVMFS
[2024-05-23 03:01:37] No cvmfs_config command found, will try listing directly
[2024-05-23 03:01:37] CVMFS is ok
[2024-05-23 03:01:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-23 03:01:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-23 03:01:37] Further information can be found at the LHC@home message board.
[2024-05-23 03:01:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-23 03:01:37] Checking for apptainer binary...
[2024-05-23 03:01:37] which: no apptainer in ((null))
[2024-05-23 03:01:37] apptainer is not installed, using version from CVMFS
[2024-05-23 03:01:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-23 03:01:38] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2024-05-23 03:01:38] apptainer works
[2024-05-23 03:01:38] Set ATHENA_PROC_NUMBER=4
[2024-05-23 03:01:38] Set ATHENA_CORE_NUMBER=4
[2024-05-23 03:01:38] Starting ATLAS job with PandaID=6208479791
[2024-05-23 03:01:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-23 11:14:46]  *** The last 200 lines of the pilot log: ***
[2024-05-23 11:14:46] 2024-05-23 09:12:39,236 | INFO     | intersect: -13680609832.008419
[2024-05-23 11:14:46] 2024-05-23 09:12:39,237 | INFO     | chi2: 5.919928334026993
[2024-05-23 11:14:46] 2024-05-23 09:12:39,237 | INFO     | model: linear, x: [1716426129.0, 1716426190.0, 1716426251.0, 1716426312.0, 1716426373.0, 1716426434.0, 1716426495.0, 1716426556.0, 1716426617.0, 1716426678.0, 1716
[2024-05-23 11:14:46] 2024-05-23 09:12:39,237 | INFO     | sum of square deviations: 33865712179.5
[2024-05-23 11:14:46] 2024-05-23 09:12:39,241 | INFO     | sum of deviations: 305216911364.0
[2024-05-23 11:14:46] 2024-05-23 09:12:39,241 | INFO     | mean x: 1716440677.5
[2024-05-23 11:14:46] 2024-05-23 09:12:39,241 | INFO     | mean y: 2310061.8953974894
[2024-05-23 11:14:46] 2024-05-23 09:12:39,241 | INFO     | -- intersect: -15467222052.158504
[2024-05-23 11:14:46] 2024-05-23 09:12:39,241 | INFO     | intersect: -15467222052.158504
[2024-05-23 11:14:46] 2024-05-23 09:12:39,241 | INFO     | chi2: 5.178949723248534
[2024-05-23 11:14:46] 2024-05-23 09:12:39,241 | INFO     | current chi2=5.178949723248534 (change=12.516682111156793 %)
[2024-05-23 11:14:46] 2024-05-23 09:12:39,241 | INFO     | right removable region: 477
[2024-05-23 11:14:46] 2024-05-23 09:12:39,242 | INFO     | model: linear, x: [1716426434.0, 1716426495.0, 1716426556.0, 1716426617.0, 1716426678.0, 1716426739.0, 1716426800.0, 1716426861.0, 1716426922.0, 1716426983.0, 1716
[2024-05-23 11:14:46] 2024-05-23 09:12:39,242 | INFO     | sum of square deviations: 33865712179.5
[2024-05-23 11:14:46] 2024-05-23 09:12:39,245 | INFO     | sum of deviations: 160807681957.5
[2024-05-23 11:14:46] 2024-05-23 09:12:39,245 | INFO     | mean x: 1716440982.5
[2024-05-23 11:14:46] 2024-05-23 09:12:39,246 | INFO     | mean y: 2323007.7761506275
[2024-05-23 11:14:46] 2024-05-23 09:12:39,246 | INFO     | -- intersect: -8148011884.036953
[2024-05-23 11:14:46] 2024-05-23 09:12:39,246 | INFO     | intersect: -8148011884.036953
[2024-05-23 11:14:46] 2024-05-23 09:12:39,246 | INFO     | chi2: 3.304936444086316
[2024-05-23 11:14:46] 2024-05-23 09:12:39,246 | INFO     | current chi2=3.304936444086316 (change=44.17269504615516 %)
[2024-05-23 11:14:46] 2024-05-23 09:12:39,246 | INFO     | model: linear, x: [1716426739.0, 1716426800.0, 1716426861.0, 1716426922.0, 1716426983.0, 1716427044.0, 1716427105.0, 1716427166.0, 1716427227.0, 1716427288.0, 1716
[2024-05-23 11:14:46] 2024-05-23 09:12:39,247 | INFO     | sum of square deviations: 32814055252.0
[2024-05-23 11:14:46] 2024-05-23 09:12:39,250 | INFO     | sum of deviations: 71583738571.0
[2024-05-23 11:14:46] 2024-05-23 09:12:39,250 | INFO     | mean x: 1716441135.0
[2024-05-23 11:14:46] 2024-05-23 09:12:39,250 | INFO     | mean y: 2335945.649048626
[2024-05-23 11:14:46] 2024-05-23 09:12:39,250 | INFO     | -- intersect: -3742073958.483775
[2024-05-23 11:14:46] 2024-05-23 09:12:39,250 | INFO     | intersect: -3742073958.483775
[2024-05-23 11:14:46] 2024-05-23 09:12:39,251 | INFO     | chi2: 1.9069930991083062
[2024-05-23 11:14:46] 2024-05-23 09:12:39,251 | INFO     | current chi2=1.9069930991083062 (change=42.298645333389636 %)
[2024-05-23 11:14:46] 2024-05-23 09:12:39,251 | INFO     | model: linear, x: [1716427044.0, 1716427105.0, 1716427166.0, 1716427227.0, 1716427288.0, 1716427349.0, 1716427410.0, 1716427471.0, 1716427532.0, 1716427593.0, 1716
[2024-05-23 11:14:46] 2024-05-23 09:12:39,251 | INFO     | sum of square deviations: 31784398737.0
[2024-05-23 11:14:46] 2024-05-23 09:12:39,254 | INFO     | sum of deviations: -5822478090.499992
[2024-05-23 11:14:46] 2024-05-23 09:12:39,254 | INFO     | mean x: 1716441287.5
[2024-05-23 11:14:46] 2024-05-23 09:12:39,254 | INFO     | mean y: 2347397.7756410255
[2024-05-23 11:14:46] 2024-05-23 09:12:39,255 | INFO     | -- intersect: 316776557.5905935
[2024-05-23 11:14:46] 2024-05-23 09:12:39,255 | INFO     | intersect: 316776557.5905935
[2024-05-23 11:14:46] 2024-05-23 09:12:39,255 | INFO     | chi2: 0.7854397178054302
[2024-05-23 11:14:46] 2024-05-23 09:12:39,255 | INFO     | current chi2=0.7854397178054302 (change=58.81266071845277 %)
[2024-05-23 11:14:46] 2024-05-23 09:12:39,255 | INFO     | model: linear, x: [1716427349.0, 1716427410.0, 1716427471.0, 1716427532.0, 1716427593.0, 1716427654.0, 1716427715.0, 1716427776.0, 1716427837.0, 1716427898.0, 1716
[2024-05-23 11:14:46] 2024-05-23 09:12:39,255 | INFO     | sum of square deviations: 30776510072.0
[2024-05-23 11:14:46] 2024-05-23 09:12:39,259 | INFO     | sum of deviations: -10890195067.999996
[2024-05-23 11:14:46] 2024-05-23 09:12:39,259 | INFO     | mean x: 1716441440.0
[2024-05-23 11:14:46] 2024-05-23 09:12:39,259 | INFO     | mean y: 2348160.4233261338
[2024-05-23 11:14:46] 2024-05-23 09:12:39,259 | INFO     | -- intersect: 609706891.5032629
[2024-05-23 11:14:46] 2024-05-23 09:12:39,259 | INFO     | intersect: 609706891.5032629
[2024-05-23 11:14:46] 2024-05-23 09:12:39,259 | INFO     | chi2: 0.7767733062585066
[2024-05-23 11:14:46] 2024-05-23 09:12:39,259 | INFO     | current chi2=0.7767733062585066 (change=1.1033834106502942 %)
[2024-05-23 11:14:46] 2024-05-23 09:12:39,259 | INFO     | left removable region: 40
[2024-05-23 11:14:46] 2024-05-23 09:12:39,260 | INFO     | model: linear, x: [1716428569.0, 1716428630.0, 1716428691.0, 1716428752.0, 1716428813.0, 1716428874.0, 1716428935.0, 1716428996.0, 1716429057.0, 1716429118.0, 1716
[2024-05-23 11:14:46] 2024-05-23 09:12:39,260 | INFO     | sum of square deviations: 25877389378.0
[2024-05-23 11:14:46] 2024-05-23 09:12:39,263 | INFO     | sum of deviations: 15759487006.0
[2024-05-23 11:14:46] 2024-05-23 09:12:39,263 | INFO     | mean x: 1716441867.0
[2024-05-23 11:14:46] 2024-05-23 09:12:39,263 | INFO     | mean y: 2352868.528604119
[2024-05-23 11:14:46] 2024-05-23 09:12:39,263 | INFO     | -- intersect: -1042970633.9471904
[2024-05-23 11:14:46] 2024-05-23 09:12:39,263 | INFO     | intersect: -1042970633.9471904
[2024-05-23 11:14:46] 2024-05-23 09:12:39,263 | INFO     | chi2: 0.0006945688904386692
[2024-05-23 11:14:46] 2024-05-23 09:12:39,263 | INFO     | -- intersect: -1042970633.9471904
[2024-05-23 11:14:46] 2024-05-23 09:12:39,263 | INFO     | current memory leak: 0.61 B/s (using 437 data points, chi2=0.00)
[2024-05-23 11:14:46] 2024-05-23 09:12:39,264 | INFO     | ..............................
[2024-05-23 11:14:46] 2024-05-23 09:12:39,264 | INFO     | . Timing measurements:
[2024-05-23 11:14:46] 2024-05-23 09:12:39,264 | INFO     | . get job = 0 s
[2024-05-23 11:14:46] 2024-05-23 09:12:39,264 | INFO     | . initial setup = 1 s
[2024-05-23 11:14:46] 2024-05-23 09:12:39,264 | INFO     | . payload setup = 4 s
[2024-05-23 11:14:46] 2024-05-23 09:12:39,264 | INFO     | . stage-in = 0 s
[2024-05-23 11:14:46] 2024-05-23 09:12:39,264 | INFO     | . payload execution = 29424 s
[2024-05-23 11:14:46] 2024-05-23 09:12:39,264 | INFO     | . stage-out = 1 s
[2024-05-23 11:14:46] 2024-05-23 09:12:39,264 | INFO     | . log creation = 0 s
[2024-05-23 11:14:46] 2024-05-23 09:12:39,264 | INFO     | ..............................
[2024-05-23 11:14:46] 2024-05-23 09:12:39,677 | INFO     | 
[2024-05-23 11:14:46] 2024-05-23 09:12:39,677 | INFO     | job summary report
[2024-05-23 11:14:46] 2024-05-23 09:12:39,677 | INFO     | --------------------------------------------------
[2024-05-23 11:14:46] 2024-05-23 09:12:39,677 | INFO     | PanDA job id: 6208479791
[2024-05-23 11:14:46] 2024-05-23 09:12:39,677 | INFO     | task id: 38921013
[2024-05-23 11:14:46] 2024-05-23 09:12:39,677 | INFO     | errors: (none)
[2024-05-23 11:14:46] 2024-05-23 09:12:39,677 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-23 11:14:46] 2024-05-23 09:12:39,678 | INFO     | pilot state: finished 
[2024-05-23 11:14:46] 2024-05-23 09:12:39,678 | INFO     | transexitcode: 0
[2024-05-23 11:14:46] 2024-05-23 09:12:39,678 | INFO     | exeerrorcode: 0
[2024-05-23 11:14:46] 2024-05-23 09:12:39,678 | INFO     | exeerrordiag: 
[2024-05-23 11:14:46] 2024-05-23 09:12:39,678 | INFO     | exitcode: 0
[2024-05-23 11:14:46] 2024-05-23 09:12:39,678 | INFO     | exitmsg: OK
[2024-05-23 11:14:46] 2024-05-23 09:12:39,678 | INFO     | cpuconsumptiontime: 113513 s
[2024-05-23 11:14:46] 2024-05-23 09:12:39,678 | INFO     | nevents: 400
[2024-05-23 11:14:46] 2024-05-23 09:12:39,678 | INFO     | neventsw: 0
[2024-05-23 11:14:46] 2024-05-23 09:12:39,678 | INFO     | pid: 1666234
[2024-05-23 11:14:46] 2024-05-23 09:12:39,679 | INFO     | pgrp: 1666234
[2024-05-23 11:14:46] 2024-05-23 09:12:39,679 | INFO     | corecount: 4
[2024-05-23 11:14:46] 2024-05-23 09:12:39,679 | INFO     | event service: False
[2024-05-23 11:14:46] 2024-05-23 09:12:39,679 | INFO     | sizes: {0: 2383680, 3: 2383886, 11: 2383914, 29431: 2421654, 29432: 2421653, 29433: 2430875, 29438: 2430989}
[2024-05-23 11:14:46] 2024-05-23 09:12:39,679 | INFO     | --------------------------------------------------
[2024-05-23 11:14:46] 2024-05-23 09:12:39,679 | INFO     | 
[2024-05-23 11:14:46] 2024-05-23 09:12:39,679 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2024-05-23 11:14:46] 2024-05-23 09:12:39,701 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-23 11:14:46] 2024-05-23 09:12:39,702 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-23 11:14:46] 2024-05-23 09:12:39,702 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-23 11:14:46] 2024-05-23 09:12:39,702 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-23 11:14:46] 2024-05-23 09:12:39,702 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-23 11:14:46] 2024-05-23 09:12:39,702 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-23 11:14:46] 2024-05-23 09:12:39,702 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-23 11:14:46] 2024-05-23 09:12:39,702 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-23 11:14:46] 2024-05-23 09:12:39,702 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-23 11:14:46] 2024-05-23 09:12:39,702 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-23 11:14:46] 2024-05-23 09:12:39,702 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-23 11:14:46] 2024-05-23 09:12:39,702 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-23 11:14:46] 2024-05-23 09:12:39,702 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-23 11:14:46] 2024-05-23 09:12:39,702 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-23 11:14:46] 2024-05-23 09:12:39,702 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-23 11:14:46] 2024-05-23 09:12:39,702 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-23 11:14:46] 2024-05-23 09:12:39,702 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-23 11:14:46] 2024-05-23 09:12:39,702 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-23 11:14:46] 2024-05-23 09:12:39,702 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-23 11:14:46] 2024-05-23 09:12:39,703 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-23 11:14:46] 2024-05-23 09:12:39,703 | INFO     | job 6208479791 has completed (purged errors)
[2024-05-23 11:14:46] 2024-05-23 09:12:39,703 | INFO     | overall cleanup function is called
[2024-05-23 11:14:46] 2024-05-23 09:12:40,710 | INFO     | --- collectZombieJob: --- 10, [1666234]
[2024-05-23 11:14:46] 2024-05-23 09:12:40,710 | INFO     | zombie collector waiting for pid 1666234
[2024-05-23 11:14:46] 2024-05-23 09:12:40,710 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-23 11:14:46] 2024-05-23 09:12:41,715 | INFO     | collected zombie processes
[2024-05-23 11:14:46] 2024-05-23 09:12:41,715 | INFO     | will now attempt to kill all subprocesses of pid=1666234
[2024-05-23 11:14:46] 2024-05-23 09:12:41,908 | INFO     | process IDs to be killed: [1666234] (in reverse order)
[2024-05-23 11:14:46] 2024-05-23 09:12:42,033 | WARNING  | found no corresponding commands to process id(s)
[2024-05-23 11:14:46] 2024-05-23 09:12:42,034 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-23 11:14:46] 2024-05-23 09:12:42,045 | INFO     | did not find any defunct processes belonging to 1666234
[2024-05-23 11:14:46] 2024-05-23 09:12:42,055 | INFO     | did not find any defunct processes belonging to 1666234
[2024-05-23 11:14:46] 2024-05-23 09:12:42,055 | INFO     | ready for new job
[2024-05-23 11:14:46] 2024-05-23 09:12:42,055 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-23 11:14:46] 2024-05-23 09:12:42,058 | INFO     | *************************************
[2024-05-23 11:14:46] 2024-05-23 09:12:42,059 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-23 11:14:46] 2024-05-23 09:12:42,059 | INFO     | *************************************
[2024-05-23 11:14:46] 2024-05-23 09:12:42,059 | INFO     | 
[2024-05-23 11:14:46] 2024-05-23 09:12:42,062 | INFO     | architecture information:
[2024-05-23 11:14:46] 2024-05-23 09:12:42,063 | INFO     | executing command: cat /etc/os-release
[2024-05-23 11:14:46] 2024-05-23 09:12:42,077 | INFO     | cat /etc/os-release:
[2024-05-23 11:14:46] NAME="CentOS Linux"
[2024-05-23 11:14:46] VERSION="7 (Core)"
[2024-05-23 11:14:46] ID="centos"
[2024-05-23 11:14:46] ID_LIKE="rhel fedora"
[2024-05-23 11:14:46] VERSION_ID="7"
[2024-05-23 11:14:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-23 11:14:46] ANSI_COLOR="0;31"
[2024-05-23 11:14:46] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-23 11:14:46] HOME_URL="https://www.centos.org/"
[2024-05-23 11:14:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-23 11:14:46] 
[2024-05-23 11:14:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-23 11:14:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-23 11:14:46] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-23 11:14:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-23 11:14:46] 
[2024-05-23 11:14:46] 2024-05-23 09:12:42,077 | INFO     | *************************************
[2024-05-23 11:14:46] 2024-05-23 09:12:42,580 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2024-05-23 11:14:46] 2024-05-23 09:12:42,599 | INFO     | sufficient remaining disk space (594938953728 B)
[2024-05-23 11:14:46] 2024-05-23 09:12:42,599 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-23 11:14:46] 2024-05-23 09:12:42,599 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-23 11:14:46] 2024-05-23 09:12:42,600 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-23 11:14:46] 2024-05-23 09:12:42,600 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-23 11:14:46] 2024-05-23 09:12:42,600 | INFO     | found 0 job(s) in 20 queues
[2024-05-23 11:14:46] 2024-05-23 09:12:42,600 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-23 11:14:46] 2024-05-23 09:12:42,601 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-23 11:14:46] 2024-05-23 09:12:42,601 | INFO     | aborting loop
[2024-05-23 11:14:46] 2024-05-23 09:12:42,601 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-23 11:14:46] 2024-05-23 09:12:43,106 | INFO     | all data control threads have been joined
[2024-05-23 11:14:46] 2024-05-23 09:12:43,602 | INFO     | [job] retrieve thread has finished
[2024-05-23 11:14:46] 2024-05-23 09:12:43,606 | INFO     | [job] job monitor thread has finished
[2024-05-23 11:14:46] 2024-05-23 09:12:43,700 | INFO     | [payload] validate_post thread has finished
[2024-05-23 11:14:46] 2024-05-23 09:12:43,998 | INFO     | [data] copytool_in thread has finished
[2024-05-23 11:14:46] 2024-05-23 09:12:44,019 | INFO     | [payload] execute_payloads thread has finished
[2024-05-23 11:14:46] 2024-05-23 09:12:44,074 | INFO     | all payload control threads have been joined
[2024-05-23 11:14:46] 2024-05-23 09:12:44,111 | INFO     | [data] control thread has finished
[2024-05-23 11:14:46] 2024-05-23 09:12:44,209 | INFO     | all job control threads have been joined
[2024-05-23 11:14:46] 2024-05-23 09:12:44,333 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-23 11:14:46] 2024-05-23 09:12:44,606 | INFO     | [data] copytool_out thread has finished
[2024-05-23 11:14:46] 2024-05-23 09:12:44,844 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-23 11:14:46] 2024-05-23 09:12:44,855 | INFO     | [payload] failed_post thread has finished
[2024-05-23 11:14:46] 2024-05-23 09:12:44,859 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-23 11:14:46] 2024-05-23 09:12:44,871 | INFO     | [job] create_data_payload thread has finished
[2024-05-23 11:14:46] 2024-05-23 09:12:44,929 | INFO     | [job] validate thread has finished
[2024-05-23 11:14:46] 2024-05-23 09:12:45,058 | INFO     | [payload] validate_pre thread has finished
[2024-05-23 11:14:46] 2024-05-23 09:12:45,078 | INFO     | [payload] control thread has finished
[2024-05-23 11:14:46] 2024-05-23 09:12:45,211 | INFO     | [job] control thread has finished
[2024-05-23 11:14:46] 2024-05-23 09:12:45,338 | INFO     | [job] queue monitor thread has finished
[2024-05-23 11:14:46] 2024-05-23 09:12:48,864 | INFO     | [data] queue_monitor thread has finished
[2024-05-23 11:14:46] 2024-05-23 09:12:50,349 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47536885576768)>', '<ExcThread(monitor, started 47537056827136)>']
[2024-05-23 11:14:46] 2024-05-23 09:12:50,641 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-23 11:14:46] 2024-05-23 09:12:50,641 | INFO     | [monitor] control thread has ended
[2024-05-23 11:14:46] 2024-05-23 09:12:55,374 | INFO     | all workflow threads have been joined
[2024-05-23 11:14:46] 2024-05-23 09:12:55,375 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-23 11:14:46] 2024-05-23 09:12:55,375 | INFO     | traces error code: 0
[2024-05-23 11:14:46] 2024-05-23 09:12:55,375 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-23 11:14:46] 2024-05-23 09:12:55,509 [wrapper] ==== pilot stdout END ====
[2024-05-23 11:14:46] 2024-05-23 09:12:55,512 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-23 11:14:46] 2024-05-23 09:12:55,515 [wrapper] pilotpid: 1658807
[2024-05-23 11:14:46] 2024-05-23 09:12:55,518 [wrapper] Pilot exit status: 0
[2024-05-23 11:14:46] 2024-05-23 09:12:55,526 [wrapper] pandaids: 6208479791
[2024-05-23 11:14:46] 2024-05-23 09:12:55,611 [wrapper] cleanup: SIGTERM to supervisor_pilot 2704676 1658808
[2024-05-23 11:14:46] 2024-05-23 09:12:55,613 [wrapper] Test setup, not cleaning
[2024-05-23 11:14:46] 2024-05-23 09:12:55,615 [wrapper] ==== wrapper stdout END ====
[2024-05-23 11:14:46] 2024-05-23 09:12:55,618 [wrapper] ==== wrapper stderr END ====
[2024-05-23 11:14:46] 2024-05-23 09:12:55,621 [wrapper] apfmon messages muted
[2024-05-23 11:14:46]  *** Error codes and diagnostics ***
[2024-05-23 11:14:46]     "exeErrorCode": 0,
[2024-05-23 11:14:46]     "exeErrorDiag": "",
[2024-05-23 11:14:46]     "pilotErrorCode": 0,
[2024-05-23 11:14:46]     "pilotErrorDiag": "",
[2024-05-23 11:14:46]  *** Listing of results directory ***
[2024-05-23 11:14:46] total 876000
[2024-05-23 11:14:46] -rw-r--r-- 1 boinc boinc    467845 May 18 03:53 pilot3.tar.gz
[2024-05-23 11:14:46] -rw-r--r-- 1 boinc boinc      5633 May 18 04:25 queuedata.json
[2024-05-23 11:14:46] -rwx------ 1 boinc boinc     32251 May 18 04:25 runpilot2-wrapper.sh
[2024-05-23 11:14:46] -rw-r--r-- 1 boinc boinc       100 May 23 03:01 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-23 11:14:46] -rwxr-xr-x 1 boinc boinc      7986 May 23 03:01 run_atlas
[2024-05-23 11:14:46] -rw-r--r-- 1 boinc boinc       105 May 23 03:01 job.xml
[2024-05-23 11:14:46] -rw-r--r-- 1 boinc boinc      6663 May 23 03:01 init_data.xml
[2024-05-23 11:14:46] -rw-r--r-- 2 boinc boinc 543297569 May 23 03:01 EVNT.38776210._000089.pool.root.1
[2024-05-23 11:14:46] -rw-r--r-- 2 boinc boinc     17537 May 23 03:01 start_atlas.sh
[2024-05-23 11:14:46] drwxrwx--x 2 boinc boinc      4096 May 23 03:01 shared
[2024-05-23 11:14:46] -rw-r--r-- 2 boinc boinc    480003 May 23 03:01 input.tar.gz
[2024-05-23 11:14:46] -rw-r--r-- 1 boinc boinc         0 May 23 03:01 boinc_lockfile
[2024-05-23 11:14:46] -rw-r--r-- 1 boinc boinc      2643 May 23 03:01 pandaJob.out
[2024-05-23 11:14:46] -rw------- 1 boinc boinc       424 May 23 03:01 setup.sh.local
[2024-05-23 11:14:46] -rw------- 1 boinc boinc   1011694 May 23 03:01 agis_schedconf.cvmfs.json
[2024-05-23 11:14:46] -rw------- 1 boinc boinc   1319723 May 23 03:01 cric_ddmendpoints.json
[2024-05-23 11:14:46] drwx------ 4 boinc boinc      4096 May 23 03:01 pilot3
[2024-05-23 11:14:46] -rw------- 1 boinc boinc 340861008 May 23 11:11 HITS.38921013._002029.pool.root.1
[2024-05-23 11:14:46] -rw------- 1 boinc boinc        95 May 23 11:12 pilot_heartbeat.json
[2024-05-23 11:14:46] -rw-r--r-- 1 boinc boinc       532 May 23 11:12 boinc_task_state.xml
[2024-05-23 11:14:46] -rw------- 1 boinc boinc      1055 May 23 11:12 memory_monitor_summary.json
[2024-05-23 11:14:46] -rw------- 1 boinc boinc         0 May 23 11:12 agis_ddmendpoints.agis.ALL.json
[2024-05-23 11:14:46] -rw------- 1 boinc boinc    550953 May 23 11:12 log.38921013._002029.job.log.tgz.1
[2024-05-23 11:14:46] -rw------- 1 boinc boinc      7772 May 23 11:12 heartbeat.json
[2024-05-23 11:14:46] -rw------- 1 boinc boinc      4344 May 23 11:12 pilotlog.txt
[2024-05-23 11:14:46] -rw------- 1 boinc boinc   4117593 May 23 11:12 log.38921013._002029.job.log.1
[2024-05-23 11:14:46] -rw------- 1 boinc boinc       357 May 23 11:12 output.list
[2024-05-23 11:14:46] -rw-r--r-- 1 boinc boinc       620 May 23 11:12 runtime_log
[2024-05-23 11:14:46] -rw------- 1 boinc boinc   4689920 May 23 11:12 result.tar.gz
[2024-05-23 11:14:46] -rw------- 1 boinc boinc       660 May 23 11:12 xtUKDmBwOS5nsSi4apGgGQJmABFKDmABFKDm4ySLDm1tRKDmyjKrxm.diag
[2024-05-23 11:14:46] -rw-r--r-- 1 boinc boinc     11410 May 23 11:12 runtime_log.err
[2024-05-23 11:14:46] -rw-r--r-- 1 boinc boinc        29 May 23 11:14 wrapper_checkpoint.txt
[2024-05-23 11:14:46] -rw-r--r-- 1 boinc boinc      8192 May 23 11:14 boinc_mmap_file
[2024-05-23 11:14:46] -rw-r--r-- 1 boinc boinc     21344 May 23 11:14 stderr.txt
[2024-05-23 11:14:46] HITS file was successfully produced:
[2024-05-23 11:14:46] -rw------- 1 boinc boinc 340861008 May 23 11:11 shared/HITS.pool.root.1
[2024-05-23 11:14:46]  *** Contents of shared directory: ***
[2024-05-23 11:14:46] total 868524
[2024-05-23 11:14:46] -rw-r--r-- 2 boinc boinc 543297569 May 23 03:01 ATLAS.root_0
[2024-05-23 11:14:46] -rw-r--r-- 2 boinc boinc     17537 May 23 03:01 start_atlas.sh
[2024-05-23 11:14:46] -rw-r--r-- 2 boinc boinc    480003 May 23 03:01 input.tar.gz
[2024-05-23 11:14:46] -rw------- 1 boinc boinc 340861008 May 23 11:11 HITS.pool.root.1
[2024-05-23 11:14:46] -rw------- 1 boinc boinc   4689920 May 23 11:12 result.tar.gz
11:14:47 (1654325): run_atlas exited; CPU time 112847.685426
11:14:47 (1654325): called boinc_finish(0)

</stderr_txt>
]]>

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