Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2024-05-18 00:41:58 (3861): Detected: vboxwrapper 26206
2024-05-18 00:41:58 (3861): Detected: BOINC client v7.24.1
2024-05-18 00:41:59 (3861): Detected: VirtualBox VboxManage Interface (Version: 7.0.14)
2024-05-18 00:41:59 (3861): Successfully copied 'init_data.xml' to the shared directory.
2024-05-18 00:41:59 (3861): Create VM. (boinc_2b747bd2b16931fe, slot#11)
2024-05-18 00:41:59 (3861): Setting Memory Size for VM. (4000MB)
2024-05-18 00:41:59 (3861): Setting CPU Count for VM. (2)
2024-05-18 00:41:59 (3861): Setting Chipset Options for VM.
2024-05-18 00:41:59 (3861): Setting Graphics Controller Options for VM.
2024-05-18 00:41:59 (3861): Setting Boot Options for VM.
2024-05-18 00:41:59 (3861): Setting Network Configuration for NAT.
2024-05-18 00:41:59 (3861): Enabling VM Network Access.
2024-05-18 00:41:59 (3861): Disabling USB Support for VM.
2024-05-18 00:41:59 (3861): Disabling COM Port Support for VM.
2024-05-18 00:41:59 (3861): Disabling LPT Port Support for VM.
2024-05-18 00:42:00 (3861): Disabling Audio Support for VM.
2024-05-18 00:42:00 (3861): Disabling Clipboard Support for VM.
2024-05-18 00:42:00 (3861): Disabling Drag and Drop Support for VM.
2024-05-18 00:42:00 (3861): Adding storage controller(s) to VM.
2024-05-18 00:42:00 (3861): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-05-18 00:42:01 (3861): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-05-18 00:42:01 (3861): forwarding host port 46005 to guest port 80
2024-05-18 00:42:01 (3861): Enabling remote desktop for VM.
2024-05-18 00:42:01 (3861): Enabling shared directory for VM.
2024-05-18 00:42:02 (3861): Starting VM using VBoxManage interface. (boinc_2b747bd2b16931fe, slot#11)
2024-05-18 00:42:03 (3861): Successfully started VM. (PID = '4130')
2024-05-18 00:42:03 (3861): Reporting VM Process ID to BOINC.
2024-05-18 00:42:03 (3861): Guest Log: BIOS: VirtualBox 7.0.14
2024-05-18 00:42:03 (3861): Guest Log: CPUID EDX: 0x178bfbff
2024-05-18 00:42:03 (3861): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-05-18 00:42:03 (3861): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-05-18 00:42:03 (3861): VM state change detected. (old = 'poweredoff', new = 'running')
2024-05-18 00:42:03 (3861): Detected: Web Application Enabled (http://localhost:46005)
2024-05-18 00:42:03 (3861): Detected: Remote Desktop Enabled (localhost:52475)
2024-05-18 00:42:03 (3861): Preference change detected
2024-05-18 00:42:03 (3861): Setting CPU throttle for VM. (100%)
2024-05-18 00:42:03 (3861): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-05-18 00:42:05 (3861): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-05-18 00:42:05 (3861): Guest Log: BIOS: Booting from Hard Disk...
2024-05-18 00:42:08 (3861): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-05-18 00:42:08 (3861): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-05-18 00:42:08 (3861): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-05-18 00:42:08 (3861): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-05-18 00:42:08 (3861): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-05-18 00:42:08 (3861): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-05-18 00:42:08 (3861): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-05-18 00:42:08 (3861): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-05-18 00:42:08 (3861): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-05-18 00:42:08 (3861): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-05-18 00:42:08 (3861): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-05-18 00:42:08 (3861): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-05-18 00:42:08 (3861): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-05-18 00:42:08 (3861): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-05-18 00:42:08 (3861): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-05-18 00:42:08 (3861): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-05-18 00:42:08 (3861): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-05-18 00:42:08 (3861): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-05-18 00:42:08 (3861): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-05-18 00:42:08 (3861): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-05-18 00:42:08 (3861): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-05-18 00:42:08 (3861): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-05-18 00:42:08 (3861): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-05-18 00:42:08 (3861): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-05-18 00:42:08 (3861): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-05-18 00:42:08 (3861): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-05-18 00:42:08 (3861): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-05-18 00:42:08 (3861): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-05-18 00:42:08 (3861): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-05-18 00:42:08 (3861): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-05-18 00:42:08 (3861): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-05-18 00:42:08 (3861): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-05-18 00:42:14 (3861): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-05-18 00:42:14 (3861): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-05-18 00:42:20 (3861): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-05-18 00:42:20 (3861): Guest Log: 00:00:00.000297 main     Log opened 2024-05-18T06:42:18.424758000Z
2024-05-18 00:42:20 (3861): Guest Log: 00:00:00.000467 main     OS Product: Linux
2024-05-18 00:42:20 (3861): Guest Log: 00:00:00.000482 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-05-18 00:42:20 (3861): Guest Log: 00:00:00.000493 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-05-18 00:42:20 (3861): Guest Log: 00:00:00.000504 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-05-18 00:42:20 (3861): Guest Log: 00:00:00.000504 main     Process ID: 1251
2024-05-18 00:42:20 (3861): Guest Log: 00:00:00.000504 main     Package type: LINUX_64BITS_GENERIC
2024-05-18 00:42:20 (3861): Guest Log: 00:00:00.002977 main     5.2.32 r132073 started. Verbose level = 0
2024-05-18 00:42:20 (3861): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-05-18 00:42:20 (3861): Guest Log: [INFO] Mounting shared directory
2024-05-18 00:42:20 (3861): Guest Log: [INFO] Checking for init_data.xml
2024-05-18 00:42:31 (3861): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-05-18 00:42:31 (3861): Guest Log: [INFO] Detected branch: prod
2024-05-18 00:42:31 (3861): Guest Log: This is the prod version of the ATLAS job wrapper
2024-05-18 00:42:31 (3861): Guest Log: Copying input files
2024-05-18 00:42:34 (3861): Guest Log: Copied input files into RunAtlas.
2024-05-18 00:42:34 (3861): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-05-18 00:42:34 (3861): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-05-18 00:42:34 (3861): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-05-18 00:42:34 (3861): Guest Log: Further information can be found at the LHC@home message board.
2024-05-18 00:42:44 (3861): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-05-18 00:42:44 (3861): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-05-18 00:42:44 (3861): Guest Log: 2.6.3.0 1526 0 32180 132870 4 1 3116989 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2024-05-18 00:42:45 (3861): Guest Log: copied the webapp to /var/www
2024-05-18 00:42:45 (3861): Guest Log: ATHENA_PROC_NUMBER=2
2024-05-18 00:42:45 (3861): Guest Log: ATHENA_CORE_NUMBER=2
2024-05-18 00:42:46 (3861): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-05-18 00:42:46 (3861): Guest Log:  *** Starting ATLAS job. (PandaID=6208479783 taskID=38921013) ***
2024-05-18 02:04:20 (3861): VM state change detected. (old = 'running', new = 'paused')
2024-05-18 02:04:21 (3861): VM state change detected. (old = 'paused', new = 'running')
2024-05-18 02:21:03 (3861): Status Report: Elapsed Time: '6000.000000'
2024-05-18 02:21:03 (3861): Status Report: CPU Time: '9943.530000'
2024-05-18 04:00:04 (3861): Status Report: Elapsed Time: '12000.000000'
2024-05-18 04:00:04 (3861): Status Report: CPU Time: '21725.240000'
2024-05-18 04:15:24 (3861): VM state change detected. (old = 'running', new = 'paused')
2024-05-18 04:15:25 (3861): VM state change detected. (old = 'paused', new = 'running')
2024-05-18 05:39:04 (3861): Status Report: Elapsed Time: '18000.000000'
2024-05-18 05:39:04 (3861): Status Report: CPU Time: '33490.710000'
2024-05-18 07:18:05 (3861): Status Report: Elapsed Time: '24000.000000'
2024-05-18 07:18:05 (3861): Status Report: CPU Time: '45271.720000'
2024-05-18 08:57:05 (3861): Status Report: Elapsed Time: '30000.000000'
2024-05-18 08:57:05 (3861): Status Report: CPU Time: '57037.400000'
2024-05-18 10:36:05 (3861): Status Report: Elapsed Time: '36000.000000'
2024-05-18 10:36:05 (3861): Status Report: CPU Time: '68788.290000'
2024-05-18 12:15:06 (3861): Status Report: Elapsed Time: '42000.000000'
2024-05-18 12:15:06 (3861): Status Report: CPU Time: '80601.290000'
2024-05-18 13:54:06 (3861): Status Report: Elapsed Time: '48000.000000'
2024-05-18 13:54:06 (3861): Status Report: CPU Time: '92417.440000'
2024-05-18 15:33:06 (3861): Status Report: Elapsed Time: '54000.000000'
2024-05-18 15:33:06 (3861): Status Report: CPU Time: '104236.620000'
2024-05-18 15:48:31 (3861): Guest Log:  *** Job finished ***
2024-05-18 15:48:31 (3861): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-05-18 15:48:31 (3861): Guest Log: 2024-05-18 21:48:01,765 | INFO     | [job] control thread has finished
2024-05-18 15:48:31 (3861): Guest Log: 2024-05-18 21:48:02,471 | INFO     | [job] queue monitor thread has finished
2024-05-18 15:48:31 (3861): Guest Log: 2024-05-18 21:48:03,168 | INFO     | [data] queue_monitor thread has finished
2024-05-18 15:48:31 (3861): Guest Log: 2024-05-18 21:48:03,753 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140121784674112)>', '<ExcThread(monitor, started 140121579751168)>']
2024-05-18 15:48:31 (3861): Guest Log: 2024-05-18 21:48:04,170 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-05-18 15:48:31 (3861): Guest Log: 2024-05-18 21:48:04,171 | INFO     | [monitor] control thread has ended
2024-05-18 15:48:31 (3861): Guest Log: 2024-05-18 21:48:08,768 | INFO     | all workflow threads have been joined
2024-05-18 15:48:31 (3861): Guest Log: 2024-05-18 21:48:08,769 | INFO     | end of generic workflow (traces error code: 0)
2024-05-18 15:48:31 (3861): Guest Log: 2024-05-18 21:48:08,769 | INFO     | traces error code: 0
2024-05-18 15:48:31 (3861): Guest Log: 2024-05-18 21:48:08,769 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-05-18 15:48:31 (3861): Guest Log: 2024-05-18 21:48:08,872 [wrapper] ==== pilot stdout END ====
2024-05-18 15:48:31 (3861): Guest Log: 2024-05-18 21:48:08,876 [wrapper] ==== wrapper stdout RESUME ====
2024-05-18 15:48:31 (3861): Guest Log: 2024-05-18 21:48:08,879 [wrapper] pilotpid: 6382
2024-05-18 15:48:31 (3861): Guest Log: 2024-05-18 21:48:08,882 [wrapper] Pilot exit status: 0
2024-05-18 15:48:31 (3861): Guest Log: 2024-05-18 21:48:09,008 [wrapper] pandaids: 6208479783
2024-05-18 15:48:31 (3861): Guest Log: 2024-05-18 21:48:09,056 [wrapper] cleanup: SIGTERM to supervisor_pilot 11573 6383
2024-05-18 15:48:31 (3861): Guest Log: 2024-05-18 21:48:09,062 [wrapper] Test setup, not cleaning
2024-05-18 15:48:31 (3861): Guest Log: 2024-05-18 21:48:09,067 [wrapper] ==== wrapper stdout END ====
2024-05-18 15:48:31 (3861): Guest Log: 2024-05-18 21:48:09,072 [wrapper] ==== wrapper stderr END ====
2024-05-18 15:48:31 (3861): Guest Log: 2024-05-18 21:48:09,080 [wrapper] apfmon messages muted
2024-05-18 15:48:31 (3861): Guest Log:  *** Error codes and diagnostics ***
2024-05-18 15:48:31 (3861): Guest Log:     "exeErrorCode": 0,
2024-05-18 15:48:31 (3861): Guest Log:     "exeErrorDiag": "",
2024-05-18 15:48:31 (3861): Guest Log:     "pilotErrorCode": 0,
2024-05-18 15:48:31 (3861): Guest Log:     "pilotErrorDiag": "",
2024-05-18 15:48:31 (3861): Guest Log:  *** Listing of results directory ***
2024-05-18 15:48:31 (3861): Guest Log: total 358820
2024-05-18 15:48:31 (3861): Guest Log: -rw-r--r--. 1 atlas atlas    467845 May 18 01:53 pilot3.tar.gz
2024-05-18 15:48:31 (3861): Guest Log: -rwx------. 1 atlas atlas     32251 May 18 02:24 runpilot2-wrapper.sh
2024-05-18 15:48:31 (3861): Guest Log: -rw-r--r--. 1 atlas atlas      5633 May 18 02:24 queuedata.json
2024-05-18 15:48:31 (3861): Guest Log: -rw-r--r--. 1 atlas atlas    480001 May 18 06:42 input.tar.gz
2024-05-18 15:48:31 (3861): Guest Log: -rw-r--r--. 1 atlas atlas      6886 May 18 06:42 init_data.xml
2024-05-18 15:48:31 (3861): Guest Log: -rw-r--r--. 1 atlas atlas     17537 May 18 06:42 start_atlas.sh
2024-05-18 15:48:31 (3861): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 18 06:42 EVNT.38776210._000005.pool.root.1 -> /data/./ATLAS.root_0
2024-05-18 15:48:31 (3861): Guest Log: -rw-r--r--. 1 atlas atlas      2640 May 18 06:42 pandaJob.out
2024-05-18 15:48:31 (3861): Guest Log: -rw-------. 1 atlas atlas       424 May 18 06:42 setup.sh.local
2024-05-18 15:48:31 (3861): Guest Log: -rw-------. 1 atlas atlas   1019065 May 18 06:43 agis_schedconf.cvmfs.json
2024-05-18 15:48:31 (3861): Guest Log: -rw-------. 1 atlas atlas   1324701 May 18 06:43 cric_ddmendpoints.json
2024-05-18 15:48:31 (3861): Guest Log: drwx------. 4 atlas atlas      4096 May 18 06:43 pilot3
2024-05-18 15:48:31 (3861): Guest Log: -rw-------. 1 atlas atlas 347985152 May 18 21:47 HITS.38921013._002021.pool.root.1
2024-05-18 15:48:31 (3861): Guest Log: -rw-------. 1 atlas atlas      1022 May 18 21:47 memory_monitor_summary.json
2024-05-18 15:48:31 (3861): Guest Log: -rw-------. 1 atlas atlas        95 May 18 21:47 pilot_heartbeat.json
2024-05-18 15:48:31 (3861): Guest Log: -rw-------. 1 atlas atlas         0 May 18 21:47 agis_ddmendpoints.agis.ALL.json
2024-05-18 15:48:31 (3861): Guest Log: -rw-------. 1 atlas atlas    767344 May 18 21:47 log.38921013._002021.job.log.tgz.1
2024-05-18 15:48:31 (3861): Guest Log: -rw-------. 1 atlas atlas      7701 May 18 21:47 heartbeat.json
2024-05-18 15:48:31 (3861): Guest Log: -rw-------. 1 atlas atlas      4394 May 18 21:48 pilotlog.txt
2024-05-18 15:48:31 (3861): Guest Log: -rw-------. 1 atlas atlas   7225466 May 18 21:48 log.38921013._002021.job.log.1
2024-05-18 15:48:31 (3861): Guest Log: -rw-------. 1 atlas atlas       357 May 18 21:48 output.list
2024-05-18 15:48:31 (3861): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 18 21:48 runtime_log
2024-05-18 15:48:31 (3861): Guest Log: -rw-------. 1 atlas atlas   8007680 May 18 21:48 result.tar.gz
2024-05-18 15:48:31 (3861): Guest Log: -rw-r--r--. 1 atlas atlas     10913 May 18 21:48 runtime_log.err
2024-05-18 15:48:31 (3861): Guest Log: -rw-------. 1 atlas atlas       644 May 18 21:48 gMPKDm6uOS5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmXeLKDmxSuKnn.diag
2024-05-18 15:48:31 (3861): Guest Log: Looking for outputfile HITS.38921013._002021.pool.root.1
2024-05-18 15:48:31 (3861): Guest Log: HITS file was successfully produced
2024-05-18 15:48:31 (3861): Guest Log: -rw-------. 1 atlas atlas 347985152 May 18 21:47 /home/atlas/RunAtlas/HITS.38921013._002021.pool.root.1
2024-05-18 15:48:31 (3861): Guest Log: Successfully finished the ATLAS job!
2024-05-18 15:48:31 (3861): Guest Log: Copying the results back to the shared directory!
2024-05-18 15:48:32 (3861): Guest Log:  *** Contents of shared directory: ***
2024-05-18 15:48:32 (3861): Guest Log: total 537368
2024-05-18 15:48:32 (3861): Guest Log: -rw-r--r--. 1 root root 541737599 May 18 06:41 ATLAS.root_0
2024-05-18 15:48:32 (3861): Guest Log: -rw-r--r--. 1 root root      6886 May 18 06:41 init_data.xml
2024-05-18 15:48:32 (3861): Guest Log: -rw-r--r--. 1 root root    480001 May 18 06:41 input.tar.gz
2024-05-18 15:48:32 (3861): Guest Log: -rw-r--r--. 1 root root   8007680 May 18  2024 result.tar.gz
2024-05-18 15:48:32 (3861): Guest Log: -rw-r--r--. 1 root root     17537 May 18 06:41 start_atlas.sh
2024-05-18 15:48:32 (3861): Guest Log:  *** Success! Shutting down the machine. ***
2024-05-18 15:48:32 (3861): VM Completion File Detected.
2024-05-18 15:48:32 (3861): Powering off VM.
2024-05-18 15:48:33 (3861): Successfully stopped VM.
2024-05-18 15:48:33 (3861): Deregistering VM. (boinc_2b747bd2b16931fe, slot#11)
2024-05-18 15:48:33 (3861): Removing network bandwidth throttle group from VM.
2024-05-18 15:48:33 (3861): Removing VM from VirtualBox.
15:48:38 (3861): called boinc_finish(0)

</stderr_txt>
]]>

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