Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:37:53 (47369): wrapper (7.7.26015): starting
02:37:53 (47369): wrapper: running run_atlas (--nthreads 8)
[2024-05-18 02:37:53] Arguments: --nthreads 8
[2024-05-18 02:37:53] Threads: 8
[2024-05-18 02:37:53] Checking for CVMFS
[2024-05-18 02:37:53] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 02:37:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 02:37:54] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 02:37:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 02:37:55] 2.11.2.0 46846 2508 113172 132870 2 183 12223226 18432001 20225 130560 0 16278143 98.566 45353635 61552 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-05-18 02:37:55] CVMFS is ok
[2024-05-18 02:37:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 02:37:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 02:37:55] Further information can be found at the LHC@home message board.
[2024-05-18 02:37:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 02:37:55] Checking for apptainer binary...
[2024-05-18 02:37:55] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 02:37:55] Running /usr/bin/apptainer --version
[2024-05-18 02:37:55] apptainer version 1.3.0-1.el7
[2024-05-18 02:37:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 02:38:01] c-212-10.aglt2.org
[2024-05-18 02:38:01] apptainer works
[2024-05-18 02:38:02] Set ATHENA_PROC_NUMBER=8
[2024-05-18 02:38:02] Set ATHENA_CORE_NUMBER=8
[2024-05-18 02:38:02] Starting ATLAS job with PandaID=6208472744
[2024-05-18 02:38:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 06:12:50]  *** The last 200 lines of the pilot log: ***
[2024-05-18 06:12:50] 2024-05-18 10:12:20,323 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 06:12:50] 2024-05-18 10:12:22,828 | INFO     | monitor loop #930: job 0:6208472744 is in state 'finished'
[2024-05-18 06:12:50] 2024-05-18 10:12:22,828 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 06:12:50] 2024-05-18 10:12:24,369 | INFO     | CPU arch script returned: x86-64-v3
[2024-05-18 06:12:50] 2024-05-18 10:12:24,369 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6208472744/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 06:12:50] 2024-05-18 10:12:24,370 | INFO     | extracted standard info from prmon json
[2024-05-18 06:12:50] 2024-05-18 10:12:24,370 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 06:12:50] 2024-05-18 10:12:24,370 | WARNING  | GPU info not found in prmon json
[2024-05-18 06:12:50] 2024-05-18 10:12:24,371 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 06:12:50] 2024-05-18 10:12:24,371 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 06:12:50] 2024-05-18 10:12:24,374 | INFO     | fitting pss+swap vs Time
[2024-05-18 06:12:50] 2024-05-18 10:12:24,374 | INFO     | model: linear, x: [1716014591.0, 1716014652.0, 1716014713.0, 1716014774.0, 1716014835.0, 1716014896.0, 1716014957.0, 1716015018.0, 1716015079.0, 1716015140.0, 1716
[2024-05-18 06:12:50] 2024-05-18 10:12:24,374 | INFO     | sum of square deviations: 2671347503.9804816
[2024-05-18 06:12:50] 2024-05-18 10:12:24,375 | INFO     | sum of deviations: 338370963800.48303
[2024-05-18 06:12:50] 2024-05-18 10:12:24,375 | INFO     | mean x: 1716020813.009756
[2024-05-18 06:12:50] 2024-05-18 10:12:24,375 | INFO     | mean y: 2195628.258536585
[2024-05-18 06:12:50] 2024-05-18 10:12:24,375 | INFO     | -- intersect: -217360620528.97705
[2024-05-18 06:12:50] 2024-05-18 10:12:24,375 | INFO     | intersect: -217360620528.97705
[2024-05-18 06:12:50] 2024-05-18 10:12:24,376 | INFO     | chi2: 14.637818693454118
[2024-05-18 06:12:50] 2024-05-18 10:12:24,376 | INFO     | model: linear, x: [1716014591.0, 1716014652.0, 1716014713.0, 1716014774.0, 1716014835.0, 1716014896.0, 1716014957.0, 1716015018.0, 1716015079.0, 1716015140.0, 1716
[2024-05-18 06:12:50] 2024-05-18 10:12:24,376 | INFO     | sum of square deviations: 2480609653.979985
[2024-05-18 06:12:50] 2024-05-18 10:12:24,377 | INFO     | sum of deviations: 341553397105.5003
[2024-05-18 06:12:50] 2024-05-18 10:12:24,377 | INFO     | mean x: 1716020660.51
[2024-05-18 06:12:50] 2024-05-18 10:12:24,377 | INFO     | mean y: 2197952.75
[2024-05-18 06:12:50] 2024-05-18 10:12:24,377 | INFO     | -- intersect: -236275478851.4313
[2024-05-18 06:12:50] 2024-05-18 10:12:24,377 | INFO     | intersect: -236275478851.4313
[2024-05-18 06:12:50] 2024-05-18 10:12:24,377 | INFO     | chi2: 13.492933482840161
[2024-05-18 06:12:50] 2024-05-18 10:12:24,377 | INFO     | current chi2=13.492933482840161 (change=7.821419533813039 %)
[2024-05-18 06:12:50] 2024-05-18 10:12:24,377 | INFO     | right removable region: 199
[2024-05-18 06:12:50] 2024-05-18 10:12:24,377 | INFO     | model: linear, x: [1716014896.0, 1716014957.0, 1716015018.0, 1716015079.0, 1716015140.0, 1716015201.0, 1716015262.0, 1716015323.0, 1716015384.0, 1716015445.0, 1716
[2024-05-18 06:12:50] 2024-05-18 10:12:24,378 | INFO     | sum of square deviations: 2480608433.979985
[2024-05-18 06:12:50] 2024-05-18 10:12:24,378 | INFO     | sum of deviations: 278166309834.9501
[2024-05-18 06:12:50] 2024-05-18 10:12:24,378 | INFO     | mean x: 1716020965.51
[2024-05-18 06:12:50] 2024-05-18 10:12:24,378 | INFO     | mean y: 2243724.275
[2024-05-18 06:12:50] 2024-05-18 10:12:24,378 | INFO     | -- intersect: -192426038400.6322
[2024-05-18 06:12:50] 2024-05-18 10:12:24,379 | INFO     | intersect: -192426038400.6322
[2024-05-18 06:12:50] 2024-05-18 10:12:24,379 | INFO     | chi2: 10.934678151503938
[2024-05-18 06:12:50] 2024-05-18 10:12:24,379 | INFO     | current chi2=10.934678151503938 (change=25.298445208958537 %)
[2024-05-18 06:12:50] 2024-05-18 10:12:24,379 | INFO     | model: linear, x: [1716015201.0, 1716015262.0, 1716015323.0, 1716015384.0, 1716015445.0, 1716015506.0, 1716015567.0, 1716015628.0, 1716015689.0, 1716015750.0, 1716
[2024-05-18 06:12:50] 2024-05-18 10:12:24,379 | INFO     | sum of square deviations: 2299171863.979479
[2024-05-18 06:12:50] 2024-05-18 10:12:24,380 | INFO     | sum of deviations: 236220635411.23068
[2024-05-18 06:12:50] 2024-05-18 10:12:24,380 | INFO     | mean x: 1716021118.0102565
[2024-05-18 06:12:50] 2024-05-18 10:12:24,380 | INFO     | mean y: 2278965.3846153845
[2024-05-18 06:12:50] 2024-05-18 10:12:24,380 | INFO     | -- intersect: -176304505762.6888
[2024-05-18 06:12:50] 2024-05-18 10:12:24,380 | INFO     | intersect: -176304505762.6888
[2024-05-18 06:12:50] 2024-05-18 10:12:24,380 | INFO     | chi2: 9.690305053492073
[2024-05-18 06:12:50] 2024-05-18 10:12:24,380 | INFO     | current chi2=9.690305053492073 (change=11.380061495826611 %)
[2024-05-18 06:12:50] 2024-05-18 10:12:24,380 | INFO     | left removable region: 20
[2024-05-18 06:12:50] 2024-05-18 10:12:24,380 | INFO     | model: linear, x: [1716015811.0, 1716015872.0, 1716015933.0, 1716015994.0, 1716016055.0, 1716016116.0, 1716016177.0, 1716016238.0, 1716016299.0, 1716016360.0, 1716
[2024-05-18 06:12:50] 2024-05-18 10:12:24,381 | INFO     | sum of square deviations: 1778380215.977653
[2024-05-18 06:12:50] 2024-05-18 10:12:24,381 | INFO     | sum of deviations: 167305761202.20663
[2024-05-18 06:12:50] 2024-05-18 10:12:24,381 | INFO     | mean x: 1716021240.0111732
[2024-05-18 06:12:50] 2024-05-18 10:12:24,381 | INFO     | mean y: 2352690.3966480447
[2024-05-18 06:12:50] 2024-05-18 10:12:24,381 | INFO     | -- intersect: -161436825062.37225
[2024-05-18 06:12:50] 2024-05-18 10:12:24,381 | INFO     | intersect: -161436825062.37225
[2024-05-18 06:12:50] 2024-05-18 10:12:24,382 | INFO     | chi2: 6.573331090995292
[2024-05-18 06:12:50] 2024-05-18 10:12:24,382 | INFO     | -- intersect: -161436825062.37225
[2024-05-18 06:12:50] 2024-05-18 10:12:24,382 | INFO     | current memory leak: 94.08 B/s (using 179 data points, chi2=6.57)
[2024-05-18 06:12:50] 2024-05-18 10:12:24,382 | INFO     | ..............................
[2024-05-18 06:12:50] 2024-05-18 10:12:24,382 | INFO     | . Timing measurements:
[2024-05-18 06:12:50] 2024-05-18 10:12:24,382 | INFO     | . get job = 0 s
[2024-05-18 06:12:50] 2024-05-18 10:12:24,382 | INFO     | . initial setup = 5 s
[2024-05-18 06:12:50] 2024-05-18 10:12:24,382 | INFO     | . payload setup = 60 s
[2024-05-18 06:12:50] 2024-05-18 10:12:24,382 | INFO     | . stage-in = 0 s
[2024-05-18 06:12:50] 2024-05-18 10:12:24,383 | INFO     | . payload execution = 12555 s
[2024-05-18 06:12:50] 2024-05-18 10:12:24,383 | INFO     | . stage-out = 4 s
[2024-05-18 06:12:50] 2024-05-18 10:12:24,383 | INFO     | . log creation = 0 s
[2024-05-18 06:12:50] 2024-05-18 10:12:24,383 | INFO     | ..............................
[2024-05-18 06:12:50] 2024-05-18 10:12:24,894 | INFO     | 
[2024-05-18 06:12:50] 2024-05-18 10:12:24,894 | INFO     | job summary report
[2024-05-18 06:12:50] 2024-05-18 10:12:24,895 | INFO     | --------------------------------------------------
[2024-05-18 06:12:50] 2024-05-18 10:12:24,895 | INFO     | PanDA job id: 6208472744
[2024-05-18 06:12:50] 2024-05-18 10:12:24,895 | INFO     | task id: 38776104
[2024-05-18 06:12:50] 2024-05-18 10:12:24,895 | INFO     | errors: (none)
[2024-05-18 06:12:50] 2024-05-18 10:12:24,895 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 06:12:50] 2024-05-18 10:12:24,895 | INFO     | pilot state: finished 
[2024-05-18 06:12:50] 2024-05-18 10:12:24,895 | INFO     | transexitcode: 0
[2024-05-18 06:12:50] 2024-05-18 10:12:24,895 | INFO     | exeerrorcode: 0
[2024-05-18 06:12:50] 2024-05-18 10:12:24,895 | INFO     | exeerrordiag: 
[2024-05-18 06:12:50] 2024-05-18 10:12:24,895 | INFO     | exitcode: 0
[2024-05-18 06:12:50] 2024-05-18 10:12:24,895 | INFO     | exitmsg: OK
[2024-05-18 06:12:50] 2024-05-18 10:12:24,895 | INFO     | cpuconsumptiontime: 37413 s
[2024-05-18 06:12:50] 2024-05-18 10:12:24,895 | INFO     | nevents: 400
[2024-05-18 06:12:50] 2024-05-18 10:12:24,895 | INFO     | neventsw: 0
[2024-05-18 06:12:50] 2024-05-18 10:12:24,896 | INFO     | pid: 21938
[2024-05-18 06:12:50] 2024-05-18 10:12:24,896 | INFO     | pgrp: 21938
[2024-05-18 06:12:50] 2024-05-18 10:12:24,896 | INFO     | corecount: 8
[2024-05-18 06:12:50] 2024-05-18 10:12:24,896 | INFO     | event service: False
[2024-05-18 06:12:50] 2024-05-18 10:12:24,896 | INFO     | sizes: {0: 2390745, 1: 2392110, 2: 2392309, 13: 2392309, 23: 2392365, 34: 2392393, 41: 2392755, 45: 2392783, 12619: 2422256, 12620: 2422255, 12625: 2431271, 12628:
[2024-05-18 06:12:50] 2024-05-18 10:12:24,896 | INFO     | --------------------------------------------------
[2024-05-18 06:12:50] 2024-05-18 10:12:24,896 | INFO     | 
[2024-05-18 06:12:50] 2024-05-18 10:12:24,896 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2024-05-18 06:12:50] 2024-05-18 10:12:25,308 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 06:12:50] 2024-05-18 10:12:25,308 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 06:12:50] 2024-05-18 10:12:25,308 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 06:12:50] 2024-05-18 10:12:25,308 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 06:12:50] 2024-05-18 10:12:25,308 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 06:12:50] 2024-05-18 10:12:25,308 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 06:12:50] 2024-05-18 10:12:25,308 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 06:12:50] 2024-05-18 10:12:25,308 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 06:12:50] 2024-05-18 10:12:25,308 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 06:12:50] 2024-05-18 10:12:25,308 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 06:12:50] 2024-05-18 10:12:25,308 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 06:12:50] 2024-05-18 10:12:25,309 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 06:12:50] 2024-05-18 10:12:25,309 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 06:12:50] 2024-05-18 10:12:25,309 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 06:12:50] 2024-05-18 10:12:25,309 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 06:12:50] 2024-05-18 10:12:25,309 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 06:12:50] 2024-05-18 10:12:25,309 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 06:12:50] 2024-05-18 10:12:25,309 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 06:12:50] 2024-05-18 10:12:25,309 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 06:12:50] 2024-05-18 10:12:25,309 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 06:12:50] 2024-05-18 10:12:25,309 | INFO     | job 6208472744 has completed (purged errors)
[2024-05-18 06:12:50] 2024-05-18 10:12:25,309 | INFO     | overall cleanup function is called
[2024-05-18 06:12:50] 2024-05-18 10:12:26,321 | INFO     | --- collectZombieJob: --- 10, [21938]
[2024-05-18 06:12:50] 2024-05-18 10:12:26,321 | INFO     | zombie collector waiting for pid 21938
[2024-05-18 06:12:50] 2024-05-18 10:12:26,321 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 06:12:50] 2024-05-18 10:12:27,329 | INFO     | collected zombie processes
[2024-05-18 06:12:50] 2024-05-18 10:12:27,329 | INFO     | will now attempt to kill all subprocesses of pid=21938
[2024-05-18 06:12:50] 2024-05-18 10:12:27,916 | INFO     | process IDs to be killed: [21938] (in reverse order)
[2024-05-18 06:12:50] 2024-05-18 10:12:28,681 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 06:12:50] 2024-05-18 10:12:28,681 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 06:12:50] 2024-05-18 10:12:28,759 | INFO     | did not find any defunct processes belonging to 21938
[2024-05-18 06:12:50] 2024-05-18 10:12:28,818 | INFO     | did not find any defunct processes belonging to 21938
[2024-05-18 06:12:50] 2024-05-18 10:12:28,818 | INFO     | ready for new job
[2024-05-18 06:12:50] 2024-05-18 10:12:28,818 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 06:12:50] 2024-05-18 10:12:28,820 | INFO     | *************************************
[2024-05-18 06:12:50] 2024-05-18 10:12:28,820 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 06:12:50] 2024-05-18 10:12:28,820 | INFO     | *************************************
[2024-05-18 06:12:50] 2024-05-18 10:12:28,820 | INFO     | 
[2024-05-18 06:12:50] 2024-05-18 10:12:28,824 | INFO     | architecture information:
[2024-05-18 06:12:50] 2024-05-18 10:12:28,828 | INFO     | executing command: cat /etc/os-release
[2024-05-18 06:12:50] 2024-05-18 10:12:28,922 | INFO     | cat /etc/os-release:
[2024-05-18 06:12:50] NAME="CentOS Linux"
[2024-05-18 06:12:50] VERSION="7 (Core)"
[2024-05-18 06:12:50] ID="centos"
[2024-05-18 06:12:50] ID_LIKE="rhel fedora"
[2024-05-18 06:12:50] VERSION_ID="7"
[2024-05-18 06:12:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 06:12:50] ANSI_COLOR="0;31"
[2024-05-18 06:12:50] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 06:12:50] HOME_URL="https://www.centos.org/"
[2024-05-18 06:12:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 06:12:50] 
[2024-05-18 06:12:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 06:12:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 06:12:50] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 06:12:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 06:12:50] 
[2024-05-18 06:12:50] 2024-05-18 10:12:28,922 | INFO     | *************************************
[2024-05-18 06:12:50] 2024-05-18 10:12:29,425 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2024-05-18 06:12:50] 2024-05-18 10:12:29,539 | INFO     | sufficient remaining disk space (100159979520 B)
[2024-05-18 06:12:50] 2024-05-18 10:12:29,539 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 06:12:50] 2024-05-18 10:12:29,541 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 06:12:50] 2024-05-18 10:12:29,541 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-18 06:12:50] 2024-05-18 10:12:29,541 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 06:12:50] 2024-05-18 10:12:29,541 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 06:12:50] 2024-05-18 10:12:29,541 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 06:12:50] 2024-05-18 10:12:29,541 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 06:12:50] 2024-05-18 10:12:29,542 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 06:12:50] 2024-05-18 10:12:29,546 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 06:12:50] 2024-05-18 10:12:29,546 | INFO     | aborting loop
[2024-05-18 06:12:50] 2024-05-18 10:12:29,554 | INFO     | all job control threads have been joined
[2024-05-18 06:12:50] 2024-05-18 10:12:29,997 | INFO     | all data control threads have been joined
[2024-05-18 06:12:50] 2024-05-18 10:12:30,174 | INFO     | all payload control threads have been joined
[2024-05-18 06:12:50] 2024-05-18 10:12:30,547 | INFO     | [job] retrieve thread has finished
[2024-05-18 06:12:50] 2024-05-18 10:12:30,551 | INFO     | [job] queue monitor thread has finished
[2024-05-18 06:12:50] 2024-05-18 10:12:30,557 | INFO     | [job] job monitor thread has finished
[2024-05-18 06:12:50] 2024-05-18 10:12:30,561 | INFO     | [job] control thread has finished
[2024-05-18 06:12:50] 2024-05-18 10:12:30,932 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 06:12:50] 2024-05-18 10:12:31,003 | INFO     | [data] control thread has finished
[2024-05-18 06:12:50] 2024-05-18 10:12:31,010 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 06:12:50] 2024-05-18 10:12:31,082 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 06:12:50] 2024-05-18 10:12:31,180 | INFO     | [payload] control thread has finished
[2024-05-18 06:12:50] 2024-05-18 10:12:31,352 | INFO     | [data] copytool_in thread has finished
[2024-05-18 06:12:50] 2024-05-18 10:12:31,548 | INFO     | [data] copytool_out thread has finished
[2024-05-18 06:12:50] 2024-05-18 10:12:31,629 | INFO     | [payload] validate_post thread has finished
[2024-05-18 06:12:50] 2024-05-18 10:12:31,952 | INFO     | [job] validate thread has finished
[2024-05-18 06:12:50] 2024-05-18 10:12:31,957 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 06:12:50] 2024-05-18 10:12:32,074 | INFO     | [payload] failed_post thread has finished
[2024-05-18 06:12:50] 2024-05-18 10:12:35,105 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 06:12:50] 2024-05-18 10:12:40,146 | INFO     | job.realtimelogging is not enabled
[2024-05-18 06:12:50] 2024-05-18 10:12:41,152 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 06:12:50] 2024-05-18 10:12:42,082 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140091009029952)>', '<ExcThread(monitor, started 140090718267136)>']
[2024-05-18 06:12:50] 2024-05-18 10:12:42,645 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 06:12:50] 2024-05-18 10:12:42,645 | INFO     | [monitor] control thread has ended
[2024-05-18 06:12:50] 2024-05-18 10:12:47,108 | INFO     | all workflow threads have been joined
[2024-05-18 06:12:50] 2024-05-18 10:12:47,108 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 06:12:50] 2024-05-18 10:12:47,109 | INFO     | traces error code: 0
[2024-05-18 06:12:50] 2024-05-18 10:12:47,109 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 06:12:50] 2024-05-18 10:12:47,424 [wrapper] ==== pilot stdout END ====
[2024-05-18 06:12:50] 2024-05-18 10:12:47,466 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 06:12:50] 2024-05-18 10:12:47,499 [wrapper] pilotpid: 73561
[2024-05-18 06:12:50] 2024-05-18 10:12:47,515 [wrapper] Pilot exit status: 0
[2024-05-18 06:12:50] 2024-05-18 10:12:47,724 [wrapper] pandaids: 6208472744
[2024-05-18 06:12:50] 2024-05-18 10:12:48,335 [wrapper] cleanup: SIGTERM to supervisor_pilot 49625 73562
[2024-05-18 06:12:50] 2024-05-18 10:12:48,369 [wrapper] Test setup, not cleaning
[2024-05-18 06:12:50] 2024-05-18 10:12:48,413 [wrapper] ==== wrapper stdout END ====
[2024-05-18 06:12:50] 2024-05-18 10:12:48,478 [wrapper] ==== wrapper stderr END ====
[2024-05-18 06:12:50] 2024-05-18 10:12:48,528 [wrapper] apfmon messages muted
[2024-05-18 06:12:50]  *** Error codes and diagnostics ***
[2024-05-18 06:12:50]     "exeErrorCode": 0,
[2024-05-18 06:12:50]     "exeErrorDiag": "",
[2024-05-18 06:12:50]     "pilotErrorCode": 0,
[2024-05-18 06:12:50]     "pilotErrorDiag": "",
[2024-05-18 06:12:50]  *** Listing of results directory ***
[2024-05-18 06:12:50] total 824124
[2024-05-18 06:12:50] -rw-r--r-- 1 boincer umatlas    467845 May 17 21:53 pilot3.tar.gz
[2024-05-18 06:12:50] -rw-r--r-- 1 boincer umatlas      5633 May 17 22:14 queuedata.json
[2024-05-18 06:12:50] -rwx------ 1 boincer umatlas     32251 May 17 22:14 runpilot2-wrapper.sh
[2024-05-18 06:12:50] -rw-r--r-- 1 boincer umatlas       100 May 18 02:37 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 06:12:50] -rwxr-xr-x 1 boincer umatlas      7986 May 18 02:37 run_atlas
[2024-05-18 06:12:50] -rw-r--r-- 1 boincer umatlas       105 May 18 02:37 job.xml
[2024-05-18 06:12:50] -rw-r--r-- 2 boincer umatlas 602703503 May 18 02:37 EVNT.38776100._000232.pool.root.1
[2024-05-18 06:12:50] drwxrwx--x 2 boincer umatlas      4096 May 18 02:37 shared
[2024-05-18 06:12:50] -rw-r--r-- 2 boincer umatlas    480004 May 18 02:37 input.tar.gz
[2024-05-18 06:12:50] -rw-r--r-- 2 boincer umatlas     17537 May 18 02:37 start_atlas.sh
[2024-05-18 06:12:50] -rw-r--r-- 1 boincer umatlas         0 May 18 02:37 boinc_lockfile
[2024-05-18 06:12:50] -rw-r--r-- 1 boincer umatlas      2642 May 18 02:38 pandaJob.out
[2024-05-18 06:12:50] -rw------- 1 boincer umatlas       467 May 18 02:38 setup.sh.local
[2024-05-18 06:12:50] -rw------- 1 boincer umatlas   1019065 May 18 02:39 agis_schedconf.cvmfs.json
[2024-05-18 06:12:50] -rw------- 1 boincer umatlas   1324701 May 18 02:39 cric_ddmendpoints.json
[2024-05-18 06:12:50] drwx------ 4 boincer umatlas      4096 May 18 02:39 pilot3
[2024-05-18 06:12:50] -rw------- 1 boincer umatlas 234567015 May 18 06:09 HITS.38776104._015087.pool.root.1
[2024-05-18 06:12:50] -rw-r--r-- 1 boincer umatlas       532 May 18 06:09 boinc_task_state.xml
[2024-05-18 06:12:50] -rw------- 1 boincer umatlas      1102 May 18 06:11 memory_monitor_summary.json
[2024-05-18 06:12:50] -rw------- 1 boincer umatlas         0 May 18 06:11 agis_ddmendpoints.agis.ALL.json
[2024-05-18 06:12:50] -rw------- 1 boincer umatlas    396400 May 18 06:11 log.38776104._015087.job.log.tgz.1
[2024-05-18 06:12:50] -rw------- 1 boincer umatlas        95 May 18 06:11 pilot_heartbeat.json
[2024-05-18 06:12:50] -rw------- 1 boincer umatlas      7765 May 18 06:12 heartbeat.json
[2024-05-18 06:12:50] -rw-r--r-- 1 boincer umatlas      6389 May 18 06:12 init_data.xml
[2024-05-18 06:12:50] -rw-r--r-- 1 boincer umatlas      8192 May 18 06:12 boinc_mmap_file
[2024-05-18 06:12:50] -rw-r--r-- 1 boincer umatlas        28 May 18 06:12 wrapper_checkpoint.txt
[2024-05-18 06:12:50] -rw------- 1 boincer umatlas      4407 May 18 06:12 pilotlog.txt
[2024-05-18 06:12:50] -rw------- 1 boincer umatlas   1163269 May 18 06:12 log.38776104._015087.job.log.1
[2024-05-18 06:12:50] -rw------- 1 boincer umatlas       357 May 18 06:12 output.list
[2024-05-18 06:12:50] -rw-r--r-- 1 boincer umatlas       620 May 18 06:12 runtime_log
[2024-05-18 06:12:50] -rw------- 1 boincer umatlas   1576960 May 18 06:12 result.tar.gz
[2024-05-18 06:12:50] -rw-r--r-- 1 boincer umatlas     11405 May 18 06:12 runtime_log.err
[2024-05-18 06:12:50] -rw------- 1 boincer umatlas       651 May 18 06:12 m1qLDmAmOS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmUtRKDm5s9tLn.diag
[2024-05-18 06:12:50] -rw-r--r-- 1 boincer umatlas      2067 May 18 06:12 stderr.txt
[2024-05-18 06:12:50] HITS file was successfully produced:
[2024-05-18 06:12:50] -rw------- 1 boincer umatlas 234567015 May 18 06:09 shared/HITS.pool.root.1
[2024-05-18 06:12:50]  *** Contents of shared directory: ***
[2024-05-18 06:12:50] total 819692
[2024-05-18 06:12:50] -rw-r--r-- 2 boincer umatlas 602703503 May 18 02:37 ATLAS.root_0
[2024-05-18 06:12:50] -rw-r--r-- 2 boincer umatlas    480004 May 18 02:37 input.tar.gz
[2024-05-18 06:12:50] -rw-r--r-- 2 boincer umatlas     17537 May 18 02:37 start_atlas.sh
[2024-05-18 06:12:50] -rw------- 1 boincer umatlas 234567015 May 18 06:09 HITS.pool.root.1
[2024-05-18 06:12:50] -rw------- 1 boincer umatlas   1576960 May 18 06:12 result.tar.gz
06:12:52 (47369): run_atlas exited; CPU time 36436.460468
06:12:52 (47369): called boinc_finish(0)

</stderr_txt>
]]>

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