Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
13:29:48 (274856): wrapper (7.7.26015): starting
13:29:48 (274856): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 13:29:48] Arguments: --nthreads 12
[2024-05-18 13:29:48] Threads: 12
[2024-05-18 13:29:48] Checking for CVMFS
[2024-05-18 13:29:49] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 13:29:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 13:29:49] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 13:29:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 13:29:49] 2.10.1.0 2778 174140 141216 132889 1 59 23755331 45568001 3734 130560 0 522039364 99.757 353440888 14145 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-05-18 13:29:49] CVMFS is ok
[2024-05-18 13:29:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 13:29:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 13:29:49] Further information can be found at the LHC@home message board.
[2024-05-18 13:29:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 13:29:49] Checking for apptainer binary...
[2024-05-18 13:29:49] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 13:29:49] Running /usr/bin/apptainer --version
[2024-05-18 13:29:49] apptainer version 1.1.8-1.el7
[2024-05-18 13:29:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 13:29:50] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0163.triumf.lcg
[2024-05-18 13:29:50] apptainer works
[2024-05-18 13:29:50] Set ATHENA_PROC_NUMBER=12
[2024-05-18 13:29:50] Set ATHENA_CORE_NUMBER=12
[2024-05-18 13:29:50] Starting ATLAS job with PandaID=6208472726
[2024-05-18 13:29:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 14:34:49]  *** The last 200 lines of the pilot log: ***
[2024-05-18 14:34:49]  guid=3d4a4954-e543-464e-82fc-a5802969f50b
[2024-05-18 14:34:49]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-18 14:34:49]  is_tar=False
[2024-05-18 14:34:49]  lfn=log.38776104._015069.job.log.tgz.1
[2024-05-18 14:34:49]  mtime=0
[2024-05-18 14:34:49]  protocol_id=None
[2024-05-18 14:34:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-18 14:34:49]  replicas=None
[2024-05-18 14:34:49]  scope=mc23_13p6TeV
[2024-05-18 14:34:49]  status=None
[2024-05-18 14:34:49]  status_code=0
[2024-05-18 14:34:49]  storage_token=
[2024-05-18 14:34:49]  surl=/home/boinc/slots/0/PanDA_Pilot-6208472726/log.38776104._015069.job.log.tgz.1
[2024-05-18 14:34:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/de/a3/log.38776104._015069.job.log.tgz.1
[2024-05-18 14:34:49]  workdir=None
[2024-05-18 14:34:49] ]
[2024-05-18 14:34:49] 2024-05-18 21:34:20,571 | INFO     | transferring file log.38776104._015069.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6208472726/log.38776104._015069.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-18 14:34:49] 2024-05-18 21:34:20,571 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6208472726/log.38776104._015069.job.log.tgz.1 /home/boinc/slots/0/log.38776104._015069.job.log.t
[2024-05-18 14:34:49] 2024-05-18 21:34:20,598 | INFO     | adding to output.list: log.38776104._015069.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/de/a3/log.38776104._015069.job.log.tg
[2024-05-18 14:34:49] 2024-05-18 21:34:20,599 | INFO     | summary of transferred files:
[2024-05-18 14:34:49] 2024-05-18 21:34:20,599 | INFO     |  -- lfn=log.38776104._015069.job.log.tgz.1, status_code=0, status=transferred
[2024-05-18 14:34:49] 2024-05-18 21:34:20,600 | INFO     | stage-out finished correctly
[2024-05-18 14:34:49] 2024-05-18 21:34:21,002 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-18 14:34:49] 2024-05-18 21:34:22,547 | WARNING  | process 7620 is no longer using CPU - aborting
[2024-05-18 14:34:49] 2024-05-18 21:34:22,548 | INFO     | will not send any job update
[2024-05-18 14:34:49] 2024-05-18 21:34:23,924 | INFO     | job 6208472726 has state=finished
[2024-05-18 14:34:49] 2024-05-18 21:34:23,925 | INFO     | preparing for final server update for job 6208472726 in state='finished'
[2024-05-18 14:34:49] 2024-05-18 21:34:23,925 | INFO     | this job has now completed (state=finished)
[2024-05-18 14:34:49] 2024-05-18 21:34:23,926 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-18 14:34:49] 2024-05-18 21:34:23,926 | INFO     | job 6208472726 has finished - writing final server update
[2024-05-18 14:34:49] 2024-05-18 21:34:23,926 | INFO     | total number of processed events: 400 (read)
[2024-05-18 14:34:49] 2024-05-18 21:34:23,933 | INFO     | executing command: lscpu
[2024-05-18 14:34:49] 2024-05-18 21:34:23,984 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-18 14:34:49] 2024-05-18 21:34:23,985 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 14:34:49] 2024-05-18 21:34:24,044 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 14:34:49] 2024-05-18 21:34:25,052 | INFO     | monitor loop #306: job 0:6208472726 is in state 'finished'
[2024-05-18 14:34:49] 2024-05-18 21:34:25,052 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 14:34:49] 2024-05-18 21:34:27,556 | INFO     | monitor loop #307: job 0:6208472726 is in state 'finished'
[2024-05-18 14:34:49] 2024-05-18 21:34:27,557 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 14:34:49] 2024-05-18 21:34:28,943 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-18 14:34:49] 2024-05-18 21:34:28,944 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6208472726/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 14:34:49] 2024-05-18 21:34:28,945 | INFO     | extracted standard info from prmon json
[2024-05-18 14:34:49] 2024-05-18 21:34:28,945 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 14:34:49] 2024-05-18 21:34:28,946 | WARNING  | GPU info not found in prmon json
[2024-05-18 14:34:49] 2024-05-18 21:34:28,946 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 14:34:49] 2024-05-18 21:34:28,946 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 14:34:49] 2024-05-18 21:34:28,949 | INFO     | fitting pss+swap vs Time
[2024-05-18 14:34:49] 2024-05-18 21:34:28,949 | INFO     | model: linear, x: [1716064536.0, 1716064597.0, 1716064658.0, 1716064719.0, 1716064780.0, 1716064841.0, 1716064902.0, 1716064963.0, 1716065024.0, 1716065085.0, 1716
[2024-05-18 14:34:49] 2024-05-18 21:34:28,949 | INFO     | sum of square deviations: 54438230.0
[2024-05-18 14:34:49] 2024-05-18 21:34:28,950 | INFO     | sum of deviations: 17110231477.999998
[2024-05-18 14:34:49] 2024-05-18 21:34:28,950 | INFO     | mean x: 1716066213.5
[2024-05-18 14:34:49] 2024-05-18 21:34:28,950 | INFO     | mean y: 2660927.1071428573
[2024-05-18 14:34:49] 2024-05-18 21:34:28,950 | INFO     | -- intersect: -539366274186.3227
[2024-05-18 14:34:49] 2024-05-18 21:34:28,950 | INFO     | intersect: -539366274186.3227
[2024-05-18 14:34:49] 2024-05-18 21:34:28,951 | INFO     | chi2: 2.347589212178492
[2024-05-18 14:34:49] 2024-05-18 21:34:28,951 | INFO     | -- intersect: -539366274186.3227
[2024-05-18 14:34:49] 2024-05-18 21:34:28,951 | INFO     | current memory leak: 314.31 B/s (using 56 data points, chi2=2.35)
[2024-05-18 14:34:49] 2024-05-18 21:34:28,951 | INFO     | ..............................
[2024-05-18 14:34:49] 2024-05-18 21:34:28,952 | INFO     | . Timing measurements:
[2024-05-18 14:34:49] 2024-05-18 21:34:28,952 | INFO     | . get job = 0 s
[2024-05-18 14:34:49] 2024-05-18 21:34:28,952 | INFO     | . initial setup = 2 s
[2024-05-18 14:34:49] 2024-05-18 21:34:28,952 | INFO     | . payload setup = 6 s
[2024-05-18 14:34:49] 2024-05-18 21:34:28,952 | INFO     | . stage-in = 0 s
[2024-05-18 14:34:49] 2024-05-18 21:34:28,952 | INFO     | . payload execution = 3829 s
[2024-05-18 14:34:49] 2024-05-18 21:34:28,952 | INFO     | . stage-out = 0 s
[2024-05-18 14:34:49] 2024-05-18 21:34:28,952 | INFO     | . log creation = 0 s
[2024-05-18 14:34:49] 2024-05-18 21:34:28,952 | INFO     | ..............................
[2024-05-18 14:34:49] 2024-05-18 21:34:29,505 | INFO     | 
[2024-05-18 14:34:49] 2024-05-18 21:34:29,505 | INFO     | job summary report
[2024-05-18 14:34:49] 2024-05-18 21:34:29,505 | INFO     | --------------------------------------------------
[2024-05-18 14:34:49] 2024-05-18 21:34:29,506 | INFO     | PanDA job id: 6208472726
[2024-05-18 14:34:49] 2024-05-18 21:34:29,506 | INFO     | task id: 38776104
[2024-05-18 14:34:49] 2024-05-18 21:34:29,506 | INFO     | errors: (none)
[2024-05-18 14:34:49] 2024-05-18 21:34:29,506 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 14:34:49] 2024-05-18 21:34:29,506 | INFO     | pilot state: finished 
[2024-05-18 14:34:49] 2024-05-18 21:34:29,506 | INFO     | transexitcode: 0
[2024-05-18 14:34:49] 2024-05-18 21:34:29,506 | INFO     | exeerrorcode: 0
[2024-05-18 14:34:49] 2024-05-18 21:34:29,506 | INFO     | exeerrordiag: 
[2024-05-18 14:34:49] 2024-05-18 21:34:29,507 | INFO     | exitcode: 0
[2024-05-18 14:34:49] 2024-05-18 21:34:29,507 | INFO     | exitmsg: OK
[2024-05-18 14:34:49] 2024-05-18 21:34:29,507 | INFO     | cpuconsumptiontime: 33924 s
[2024-05-18 14:34:49] 2024-05-18 21:34:29,507 | INFO     | nevents: 400
[2024-05-18 14:34:49] 2024-05-18 21:34:29,507 | INFO     | neventsw: 0
[2024-05-18 14:34:49] 2024-05-18 21:34:29,507 | INFO     | pid: 7620
[2024-05-18 14:34:49] 2024-05-18 21:34:29,507 | INFO     | pgrp: 7620
[2024-05-18 14:34:49] 2024-05-18 21:34:29,507 | INFO     | corecount: 12
[2024-05-18 14:34:49] 2024-05-18 21:34:29,507 | INFO     | event service: False
[2024-05-18 14:34:49] 2024-05-18 21:34:29,508 | INFO     | sizes: {0: 2392200, 6: 2392406, 11: 2392434, 3840: 2418062, 3841: 2427016, 3842: 2427072, 3849: 2427370}
[2024-05-18 14:34:49] 2024-05-18 21:34:29,508 | INFO     | --------------------------------------------------
[2024-05-18 14:34:49] 2024-05-18 21:34:29,508 | INFO     | 
[2024-05-18 14:34:49] 2024-05-18 21:34:29,508 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 14:34:49] 2024-05-18 21:34:29,539 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 14:34:49] 2024-05-18 21:34:29,540 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 14:34:49] 2024-05-18 21:34:29,540 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 14:34:49] 2024-05-18 21:34:29,540 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 14:34:49] 2024-05-18 21:34:29,540 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 14:34:49] 2024-05-18 21:34:29,540 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 14:34:49] 2024-05-18 21:34:29,540 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 14:34:49] 2024-05-18 21:34:29,540 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 14:34:49] 2024-05-18 21:34:29,541 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 14:34:49] 2024-05-18 21:34:29,541 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 14:34:49] 2024-05-18 21:34:29,541 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 14:34:49] 2024-05-18 21:34:29,541 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 14:34:49] 2024-05-18 21:34:29,541 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 14:34:49] 2024-05-18 21:34:29,541 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 14:34:49] 2024-05-18 21:34:29,541 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 14:34:49] 2024-05-18 21:34:29,541 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 14:34:49] 2024-05-18 21:34:29,542 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 14:34:49] 2024-05-18 21:34:29,542 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 14:34:49] 2024-05-18 21:34:29,542 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 14:34:49] 2024-05-18 21:34:29,542 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 14:34:49] 2024-05-18 21:34:29,542 | INFO     | job 6208472726 has completed (purged errors)
[2024-05-18 14:34:49] 2024-05-18 21:34:29,542 | INFO     | overall cleanup function is called
[2024-05-18 14:34:49] 2024-05-18 21:34:30,552 | INFO     | --- collectZombieJob: --- 10, [7620]
[2024-05-18 14:34:49] 2024-05-18 21:34:30,553 | INFO     | zombie collector waiting for pid 7620
[2024-05-18 14:34:49] 2024-05-18 21:34:30,553 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 14:34:49] 2024-05-18 21:34:31,559 | INFO     | collected zombie processes
[2024-05-18 14:34:49] 2024-05-18 21:34:31,559 | INFO     | will now attempt to kill all subprocesses of pid=7620
[2024-05-18 14:34:49] 2024-05-18 21:34:31,657 | INFO     | process IDs to be killed: [7620] (in reverse order)
[2024-05-18 14:34:49] 2024-05-18 21:34:31,754 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 14:34:49] 2024-05-18 21:34:31,755 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 14:34:49] 2024-05-18 21:34:31,762 | INFO     | did not find any defunct processes belonging to 7620
[2024-05-18 14:34:49] 2024-05-18 21:34:31,766 | INFO     | did not find any defunct processes belonging to 7620
[2024-05-18 14:34:49] 2024-05-18 21:34:31,767 | INFO     | ready for new job
[2024-05-18 14:34:49] 2024-05-18 21:34:31,767 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 14:34:49] 2024-05-18 21:34:31,768 | INFO     | *************************************
[2024-05-18 14:34:49] 2024-05-18 21:34:31,768 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 14:34:49] 2024-05-18 21:34:31,768 | INFO     | *************************************
[2024-05-18 14:34:49] 2024-05-18 21:34:31,769 | INFO     | 
[2024-05-18 14:34:49] 2024-05-18 21:34:31,772 | INFO     | architecture information:
[2024-05-18 14:34:49] 2024-05-18 21:34:31,772 | INFO     | executing command: cat /etc/os-release
[2024-05-18 14:34:49] 2024-05-18 21:34:31,794 | INFO     | cat /etc/os-release:
[2024-05-18 14:34:49] NAME="CentOS Linux"
[2024-05-18 14:34:49] VERSION="7 (Core)"
[2024-05-18 14:34:49] ID="centos"
[2024-05-18 14:34:49] ID_LIKE="rhel fedora"
[2024-05-18 14:34:49] VERSION_ID="7"
[2024-05-18 14:34:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 14:34:49] ANSI_COLOR="0;31"
[2024-05-18 14:34:49] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 14:34:49] HOME_URL="https://www.centos.org/"
[2024-05-18 14:34:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 14:34:49] 
[2024-05-18 14:34:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 14:34:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 14:34:49] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 14:34:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 14:34:49] 
[2024-05-18 14:34:49] 2024-05-18 21:34:31,794 | INFO     | *************************************
[2024-05-18 14:34:49] 2024-05-18 21:34:32,298 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 14:34:49] 2024-05-18 21:34:32,322 | INFO     | sufficient remaining disk space (2240368607232 B)
[2024-05-18 14:34:49] 2024-05-18 21:34:32,323 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 14:34:49] 2024-05-18 21:34:32,323 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 14:34:49] 2024-05-18 21:34:32,324 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 14:34:49] 2024-05-18 21:34:32,342 | INFO     | all payload control threads have been joined
[2024-05-18 14:34:49] 2024-05-18 21:34:32,569 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-18 14:34:49] 2024-05-18 21:34:32,569 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-18 14:34:49] 2024-05-18 21:34:32,569 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 14:34:49] 2024-05-18 21:34:32,569 | INFO     | will abort loop
[2024-05-18 14:34:49] 2024-05-18 21:34:32,717 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 14:34:49] 2024-05-18 21:34:32,717 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 14:34:49] 2024-05-18 21:34:32,718 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 14:34:49] 2024-05-18 21:34:33,329 | INFO     | [job] retrieve thread has finished
[2024-05-18 14:34:49] 2024-05-18 21:34:33,347 | INFO     | [payload] control thread has finished
[2024-05-18 14:34:49] 2024-05-18 21:34:33,348 | INFO     | all data control threads have been joined
[2024-05-18 14:34:49] 2024-05-18 21:34:33,355 | INFO     | all job control threads have been joined
[2024-05-18 14:34:49] 2024-05-18 21:34:33,448 | INFO     | [job] validate thread has finished
[2024-05-18 14:34:49] 2024-05-18 21:34:33,504 | INFO     | [payload] validate_post thread has finished
[2024-05-18 14:34:49] 2024-05-18 21:34:33,575 | INFO     | [job] job monitor thread has finished
[2024-05-18 14:34:49] 2024-05-18 21:34:33,702 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 14:34:49] 2024-05-18 21:34:33,806 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 14:34:49] 2024-05-18 21:34:33,922 | INFO     | [payload] failed_post thread has finished
[2024-05-18 14:34:49] 2024-05-18 21:34:33,996 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 14:34:49] 2024-05-18 21:34:34,034 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 14:34:49] 2024-05-18 21:34:34,133 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 14:34:49] 2024-05-18 21:34:34,354 | INFO     | [data] control thread has finished
[2024-05-18 14:34:49] 2024-05-18 21:34:34,361 | INFO     | [job] control thread has finished
[2024-05-18 14:34:49] 2024-05-18 21:34:34,619 | INFO     | [data] copytool_in thread has finished
[2024-05-18 14:34:49] 2024-05-18 21:34:35,040 | INFO     | [job] queue monitor thread has finished
[2024-05-18 14:34:49] 2024-05-18 21:34:35,711 | INFO     | [data] copytool_out thread has finished
[2024-05-18 14:34:49] 2024-05-18 21:34:36,331 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 14:34:49] 2024-05-18 21:34:42,437 | INFO     | job.realtimelogging is not enabled
[2024-05-18 14:34:49] 2024-05-18 21:34:43,442 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 14:34:49] 2024-05-18 21:34:43,457 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140443392931648)>', '<ExcThread(monitor, started 140443106912000)>']
[2024-05-18 14:34:49] 2024-05-18 21:34:43,783 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 14:34:49] 2024-05-18 21:34:43,784 | INFO     | [monitor] control thread has ended
[2024-05-18 14:34:49] 2024-05-18 21:34:48,483 | INFO     | all workflow threads have been joined
[2024-05-18 14:34:49] 2024-05-18 21:34:48,484 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 14:34:49] 2024-05-18 21:34:48,484 | INFO     | traces error code: 0
[2024-05-18 14:34:49] 2024-05-18 21:34:48,485 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 14:34:49] 2024-05-18 21:34:48,557 [wrapper] ==== pilot stdout END ====
[2024-05-18 14:34:49] 2024-05-18 21:34:48,562 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 14:34:49] 2024-05-18 21:34:48,566 [wrapper] pilotpid: 841
[2024-05-18 14:34:49] 2024-05-18 21:34:48,570 [wrapper] Pilot exit status: 0
[2024-05-18 14:34:49] 2024-05-18 21:34:48,585 [wrapper] pandaids: 6208472726
[2024-05-18 14:34:49] 2024-05-18 21:34:48,638 [wrapper] cleanup: SIGTERM to supervisor_pilot  48585 842
[2024-05-18 14:34:49] 2024-05-18 21:34:48,642 [wrapper] Test setup, not cleaning
[2024-05-18 14:34:49] 2024-05-18 21:34:48,645 [wrapper] ==== wrapper stdout END ====
[2024-05-18 14:34:49] 2024-05-18 21:34:48,648 [wrapper] ==== wrapper stderr END ====
[2024-05-18 14:34:49] 2024-05-18 21:34:48,654 [wrapper] apfmon messages muted
[2024-05-18 14:34:49]  *** Error codes and diagnostics ***
[2024-05-18 14:34:49]     "exeErrorCode": 0,
[2024-05-18 14:34:49]     "exeErrorDiag": "",
[2024-05-18 14:34:49]     "pilotErrorCode": 0,
[2024-05-18 14:34:49]     "pilotErrorDiag": "",
[2024-05-18 14:34:49]  *** Listing of results directory ***
[2024-05-18 14:34:49] total 813516
[2024-05-18 14:34:49] -rw-r--r-- 1 boinc boinc    467845 May 17 18:53 pilot3.tar.gz
[2024-05-18 14:34:49] -rwx------ 1 boinc boinc     32251 May 17 19:12 runpilot2-wrapper.sh
[2024-05-18 14:34:49] -rw-r--r-- 1 boinc boinc      5633 May 17 19:12 queuedata.json
[2024-05-18 14:34:49] -rw-r--r-- 1 boinc boinc       100 May 18 13:29 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 14:34:49] -rwxr-xr-x 1 boinc boinc      7986 May 18 13:29 run_atlas
[2024-05-18 14:34:49] -rw-r--r-- 1 boinc boinc       105 May 18 13:29 job.xml
[2024-05-18 14:34:49] -rw-r--r-- 1 boinc boinc      6623 May 18 13:29 init_data.xml
[2024-05-18 14:34:49] -rw-r--r-- 2 boinc boinc 597835718 May 18 13:29 EVNT.38776100._000228.pool.root.1
[2024-05-18 14:34:49] -rw-r--r-- 2 boinc boinc     17537 May 18 13:29 start_atlas.sh
[2024-05-18 14:34:49] drwxrwx--x 2 boinc boinc      4096 May 18 13:29 shared
[2024-05-18 14:34:49] -rw-r--r-- 2 boinc boinc    480009 May 18 13:29 input.tar.gz
[2024-05-18 14:34:49] -rw-r--r-- 1 boinc boinc         0 May 18 13:29 boinc_lockfile
[2024-05-18 14:34:49] -rw-r--r-- 1 boinc boinc      2642 May 18 13:29 pandaJob.out
[2024-05-18 14:34:49] -rw------- 1 boinc boinc       424 May 18 13:29 setup.sh.local
[2024-05-18 14:34:49] -rw------- 1 boinc boinc   1019075 May 18 13:30 agis_schedconf.cvmfs.json
[2024-05-18 14:34:49] -rw------- 1 boinc boinc         0 May 18 13:30 agis_ddmendpoints.agis.ALL.json
[2024-05-18 14:34:49] -rw------- 1 boinc boinc   1324701 May 18 13:30 cric_ddmendpoints.json
[2024-05-18 14:34:49] drwx------ 4 boinc boinc      4096 May 18 13:30 pilot3
[2024-05-18 14:34:49] -rw------- 1 boinc boinc 230175209 May 18 14:33 HITS.38776104._015069.pool.root.1
[2024-05-18 14:34:49] -rw-r--r-- 1 boinc boinc       530 May 18 14:34 boinc_task_state.xml
[2024-05-18 14:34:49] -rw------- 1 boinc boinc        95 May 18 14:34 pilot_heartbeat.json
[2024-05-18 14:34:49] -rw------- 1 boinc boinc      1044 May 18 14:34 memory_monitor_summary.json
[2024-05-18 14:34:49] -rw------- 1 boinc boinc    351456 May 18 14:34 log.38776104._015069.job.log.tgz.1
[2024-05-18 14:34:49] -rw------- 1 boinc boinc      7756 May 18 14:34 heartbeat.json
[2024-05-18 14:34:49] -rw-r--r-- 1 boinc boinc        27 May 18 14:34 wrapper_checkpoint.txt
[2024-05-18 14:34:49] -rw-r--r-- 1 boinc boinc      8192 May 18 14:34 boinc_mmap_file
[2024-05-18 14:34:49] -rw------- 1 boinc boinc      4468 May 18 14:34 pilotlog.txt
[2024-05-18 14:34:49] -rw------- 1 boinc boinc    395573 May 18 14:34 log.38776104._015069.job.log.1
[2024-05-18 14:34:49] -rw------- 1 boinc boinc       357 May 18 14:34 output.list
[2024-05-18 14:34:49] -rw-r--r-- 1 boinc boinc       620 May 18 14:34 runtime_log
[2024-05-18 14:34:49] -rw------- 1 boinc boinc    768000 May 18 14:34 result.tar.gz
[2024-05-18 14:34:49] -rw-r--r-- 1 boinc boinc     11286 May 18 14:34 runtime_log.err
[2024-05-18 14:34:49] -rw------- 1 boinc boinc       651 May 18 14:34 lz5NDm7jOS5n7Olcko1bjSoqABFKDmABFKDmOtvXDmh2ZKDmTB80Hn.diag
[2024-05-18 14:34:49] -rw-r--r-- 1 boinc boinc     21679 May 18 14:34 stderr.txt
[2024-05-18 14:34:49] HITS file was successfully produced:
[2024-05-18 14:34:49] -rw------- 1 boinc boinc 230175209 May 18 14:33 shared/HITS.pool.root.1
[2024-05-18 14:34:49]  *** Contents of shared directory: ***
[2024-05-18 14:34:49] total 809860
[2024-05-18 14:34:49] -rw-r--r-- 2 boinc boinc 597835718 May 18 13:29 ATLAS.root_0
[2024-05-18 14:34:49] -rw-r--r-- 2 boinc boinc     17537 May 18 13:29 start_atlas.sh
[2024-05-18 14:34:49] -rw-r--r-- 2 boinc boinc    480009 May 18 13:29 input.tar.gz
[2024-05-18 14:34:49] -rw------- 1 boinc boinc 230175209 May 18 14:33 HITS.pool.root.1
[2024-05-18 14:34:49] -rw------- 1 boinc boinc    768000 May 18 14:34 result.tar.gz
14:34:51 (274856): run_atlas exited; CPU time 33843.682249
14:34:51 (274856): called boinc_finish(0)

</stderr_txt>
]]>

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