Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:40:29 (37323): wrapper (7.7.26015): starting
01:40:29 (37323): wrapper: running run_atlas (--nthreads 8)
[2024-05-18 01:40:29] Arguments: --nthreads 8
[2024-05-18 01:40:29] Threads: 8
[2024-05-18 01:40:29] Checking for CVMFS
[2024-05-18 01:40:29] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 01:40:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 01:40:30] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 01:40:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 01:40:30] 2.11.2.0 46942 2569 117004 132868 0 278 10808003 18432000 21298 130560 0 18494143 98.510 58971446 66649 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-05-18 01:40:30] CVMFS is ok
[2024-05-18 01:40:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 01:40:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 01:40:30] Further information can be found at the LHC@home message board.
[2024-05-18 01:40:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 01:40:30] Checking for apptainer binary...
[2024-05-18 01:40:30] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 01:40:30] Running /usr/bin/apptainer --version
[2024-05-18 01:40:30] apptainer version 1.3.0-1.el7
[2024-05-18 01:40:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 01:40:32] c-212-14.aglt2.org
[2024-05-18 01:40:32] apptainer works
[2024-05-18 01:40:32] Set ATHENA_PROC_NUMBER=8
[2024-05-18 01:40:32] Set ATHENA_CORE_NUMBER=8
[2024-05-18 01:40:32] Starting ATLAS job with PandaID=6208472581
[2024-05-18 01:40:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 05:14:54]  *** The last 200 lines of the pilot log: ***
[2024-05-18 05:14:54] 2024-05-18 09:14:22,746 | INFO     | monitor loop #931: job 0:6208472581 is in state 'finished'
[2024-05-18 05:14:54] 2024-05-18 09:14:22,746 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 05:14:54] 2024-05-18 09:14:25,254 | INFO     | monitor loop #932: job 0:6208472581 is in state 'finished'
[2024-05-18 05:14:54] 2024-05-18 09:14:25,255 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 05:14:54] 2024-05-18 09:14:27,766 | INFO     | monitor loop #933: job 0:6208472581 is in state 'finished'
[2024-05-18 05:14:54] 2024-05-18 09:14:27,767 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 05:14:54] 2024-05-18 09:14:30,271 | INFO     | monitor loop #934: job 0:6208472581 is in state 'finished'
[2024-05-18 05:14:54] 2024-05-18 09:14:30,273 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 05:14:54] 2024-05-18 09:14:32,783 | INFO     | monitor loop #935: job 0:6208472581 is in state 'finished'
[2024-05-18 05:14:54] 2024-05-18 09:14:32,784 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 05:14:54] 2024-05-18 09:14:35,288 | INFO     | monitor loop #936: job 0:6208472581 is in state 'finished'
[2024-05-18 05:14:54] 2024-05-18 09:14:35,289 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 05:14:54] 2024-05-18 09:14:35,663 | INFO     | CPU arch script returned: x86-64-v3
[2024-05-18 05:14:54] 2024-05-18 09:14:35,664 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6208472581/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 05:14:54] 2024-05-18 09:14:35,664 | INFO     | extracted standard info from prmon json
[2024-05-18 05:14:54] 2024-05-18 09:14:35,665 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 05:14:54] 2024-05-18 09:14:35,665 | WARNING  | GPU info not found in prmon json
[2024-05-18 05:14:54] 2024-05-18 09:14:35,665 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 05:14:54] 2024-05-18 09:14:35,665 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 05:14:54] 2024-05-18 09:14:35,668 | INFO     | fitting pss+swap vs Time
[2024-05-18 05:14:54] 2024-05-18 09:14:35,668 | INFO     | model: linear, x: [1716010971.0, 1716011032.0, 1716011093.0, 1716011154.0, 1716011215.0, 1716011276.0, 1716011337.0, 1716011398.0, 1716011459.0, 1716011520.0, 1716
[2024-05-18 05:14:54] 2024-05-18 09:14:35,669 | INFO     | sum of square deviations: 2790344411.9951944
[2024-05-18 05:14:54] 2024-05-18 09:14:35,669 | INFO     | sum of deviations: 321578714980.70667
[2024-05-18 05:14:54] 2024-05-18 09:14:35,670 | INFO     | mean x: 1716017284.5048077
[2024-05-18 05:14:54] 2024-05-18 09:14:35,670 | INFO     | mean y: 2239200.793269231
[2024-05-18 05:14:54] 2024-05-18 09:14:35,670 | INFO     | -- intersect: -197763538695.11765
[2024-05-18 05:14:54] 2024-05-18 09:14:35,670 | INFO     | intersect: -197763538695.11765
[2024-05-18 05:14:54] 2024-05-18 09:14:35,670 | INFO     | chi2: 14.082689320664345
[2024-05-18 05:14:54] 2024-05-18 09:14:35,670 | INFO     | model: linear, x: [1716010971.0, 1716011032.0, 1716011093.0, 1716011154.0, 1716011215.0, 1716011276.0, 1716011337.0, 1716011398.0, 1716011459.0, 1716011520.0, 1716
[2024-05-18 05:14:54] 2024-05-18 09:14:35,670 | INFO     | sum of square deviations: 2593913126.9950833
[2024-05-18 05:14:54] 2024-05-18 09:14:35,671 | INFO     | sum of deviations: 326116899667.5566
[2024-05-18 05:14:54] 2024-05-18 09:14:35,671 | INFO     | mean x: 1716017132.0049262
[2024-05-18 05:14:54] 2024-05-18 09:14:35,671 | INFO     | mean y: 2242508.4433497535
[2024-05-18 05:14:54] 2024-05-18 09:14:35,671 | INFO     | -- intersect: -215742140386.19604
[2024-05-18 05:14:54] 2024-05-18 09:14:35,671 | INFO     | intersect: -215742140386.19604
[2024-05-18 05:14:54] 2024-05-18 09:14:35,672 | INFO     | chi2: 13.002363647109908
[2024-05-18 05:14:54] 2024-05-18 09:14:35,672 | INFO     | current chi2=13.002363647109908 (change=7.6713023269583385 %)
[2024-05-18 05:14:54] 2024-05-18 09:14:35,672 | INFO     | right removable region: 202
[2024-05-18 05:14:54] 2024-05-18 09:14:35,672 | INFO     | model: linear, x: [1716011276.0, 1716011337.0, 1716011398.0, 1716011459.0, 1716011520.0, 1716011581.0, 1716011642.0, 1716011703.0, 1716011764.0, 1716011825.0, 1716
[2024-05-18 05:14:54] 2024-05-18 09:14:35,672 | INFO     | sum of square deviations: 2593912516.9950833
[2024-05-18 05:14:54] 2024-05-18 09:14:35,673 | INFO     | sum of deviations: 265604995460.84717
[2024-05-18 05:14:54] 2024-05-18 09:14:35,673 | INFO     | mean x: 1716017437.0049262
[2024-05-18 05:14:54] 2024-05-18 09:14:35,673 | INFO     | mean y: 2282562.15270936
[2024-05-18 05:14:54] 2024-05-18 09:14:35,673 | INFO     | -- intersect: -175710198325.37906
[2024-05-18 05:14:54] 2024-05-18 09:14:35,673 | INFO     | intersect: -175710198325.37906
[2024-05-18 05:14:54] 2024-05-18 09:14:35,673 | INFO     | chi2: 11.098931526315043
[2024-05-18 05:14:54] 2024-05-18 09:14:35,673 | INFO     | current chi2=11.098931526315043 (change=21.18741475018597 %)
[2024-05-18 05:14:54] 2024-05-18 09:14:35,673 | INFO     | left removable region: 10
[2024-05-18 05:14:54] 2024-05-18 09:14:35,673 | INFO     | model: linear, x: [1716011581.0, 1716011642.0, 1716011703.0, 1716011764.0, 1716011825.0, 1716011886.0, 1716011947.0, 1716012008.0, 1716012069.0, 1716012130.0, 1716
[2024-05-18 05:14:54] 2024-05-18 09:14:35,674 | INFO     | sum of square deviations: 2194671603.9948006
[2024-05-18 05:14:54] 2024-05-18 09:14:35,674 | INFO     | sum of deviations: 227369968414.6197
[2024-05-18 05:14:54] 2024-05-18 09:14:35,674 | INFO     | mean x: 1716017406.5052083
[2024-05-18 05:14:54] 2024-05-18 09:14:35,674 | INFO     | mean y: 2322368.8802083335
[2024-05-18 05:14:54] 2024-05-18 09:14:35,674 | INFO     | -- intersect: -177778637117.64493
[2024-05-18 05:14:54] 2024-05-18 09:14:35,674 | INFO     | intersect: -177778637117.64493
[2024-05-18 05:14:54] 2024-05-18 09:14:35,675 | INFO     | chi2: 8.708993010122049
[2024-05-18 05:14:54] 2024-05-18 09:14:35,675 | INFO     | -- intersect: -177778637117.64493
[2024-05-18 05:14:54] 2024-05-18 09:14:35,675 | INFO     | current memory leak: 103.60 B/s (using 192 data points, chi2=8.71)
[2024-05-18 05:14:54] 2024-05-18 09:14:35,675 | INFO     | ..............................
[2024-05-18 05:14:54] 2024-05-18 09:14:35,675 | INFO     | . Timing measurements:
[2024-05-18 05:14:54] 2024-05-18 09:14:35,675 | INFO     | . get job = 0 s
[2024-05-18 05:14:54] 2024-05-18 09:14:35,675 | INFO     | . initial setup = 1 s
[2024-05-18 05:14:54] 2024-05-18 09:14:35,676 | INFO     | . payload setup = 23 s
[2024-05-18 05:14:54] 2024-05-18 09:14:35,676 | INFO     | . stage-in = 0 s
[2024-05-18 05:14:54] 2024-05-18 09:14:35,676 | INFO     | . payload execution = 12679 s
[2024-05-18 05:14:54] 2024-05-18 09:14:35,676 | INFO     | . stage-out = 2 s
[2024-05-18 05:14:54] 2024-05-18 09:14:35,676 | INFO     | . log creation = 0 s
[2024-05-18 05:14:54] 2024-05-18 09:14:35,676 | INFO     | ..............................
[2024-05-18 05:14:54] 2024-05-18 09:14:35,744 | INFO     | 
[2024-05-18 05:14:54] 2024-05-18 09:14:35,745 | INFO     | job summary report
[2024-05-18 05:14:54] 2024-05-18 09:14:35,745 | INFO     | --------------------------------------------------
[2024-05-18 05:14:54] 2024-05-18 09:14:35,745 | INFO     | PanDA job id: 6208472581
[2024-05-18 05:14:54] 2024-05-18 09:14:35,745 | INFO     | task id: 38776125
[2024-05-18 05:14:54] 2024-05-18 09:14:35,745 | INFO     | errors: (none)
[2024-05-18 05:14:54] 2024-05-18 09:14:35,745 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 05:14:54] 2024-05-18 09:14:35,745 | INFO     | pilot state: finished 
[2024-05-18 05:14:54] 2024-05-18 09:14:35,745 | INFO     | transexitcode: 0
[2024-05-18 05:14:54] 2024-05-18 09:14:35,745 | INFO     | exeerrorcode: 0
[2024-05-18 05:14:54] 2024-05-18 09:14:35,745 | INFO     | exeerrordiag: 
[2024-05-18 05:14:54] 2024-05-18 09:14:35,745 | INFO     | exitcode: 0
[2024-05-18 05:14:54] 2024-05-18 09:14:35,745 | INFO     | exitmsg: OK
[2024-05-18 05:14:54] 2024-05-18 09:14:35,745 | INFO     | cpuconsumptiontime: 42639 s
[2024-05-18 05:14:54] 2024-05-18 09:14:35,745 | INFO     | nevents: 400
[2024-05-18 05:14:54] 2024-05-18 09:14:35,745 | INFO     | neventsw: 0
[2024-05-18 05:14:54] 2024-05-18 09:14:35,745 | INFO     | pid: 87222
[2024-05-18 05:14:54] 2024-05-18 09:14:35,745 | INFO     | pgrp: 87222
[2024-05-18 05:14:54] 2024-05-18 09:14:35,745 | INFO     | corecount: 8
[2024-05-18 05:14:54] 2024-05-18 09:14:35,745 | INFO     | event service: False
[2024-05-18 05:14:54] 2024-05-18 09:14:35,745 | INFO     | sizes: {0: 2392244, 11: 2392244, 20: 2392478, 21: 2392506, 12707: 2422150, 12710: 2431294, 12759: 2431408}
[2024-05-18 05:14:54] 2024-05-18 09:14:35,746 | INFO     | --------------------------------------------------
[2024-05-18 05:14:54] 2024-05-18 09:14:35,746 | INFO     | 
[2024-05-18 05:14:54] 2024-05-18 09:14:35,746 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2024-05-18 05:14:54] 2024-05-18 09:14:36,064 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 05:14:54] 2024-05-18 09:14:36,064 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 05:14:54] 2024-05-18 09:14:36,064 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 05:14:54] 2024-05-18 09:14:36,065 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 05:14:54] 2024-05-18 09:14:36,065 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 05:14:54] 2024-05-18 09:14:36,065 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 05:14:54] 2024-05-18 09:14:36,065 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 05:14:54] 2024-05-18 09:14:36,065 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 05:14:54] 2024-05-18 09:14:36,065 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 05:14:54] 2024-05-18 09:14:36,065 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 05:14:54] 2024-05-18 09:14:36,065 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 05:14:54] 2024-05-18 09:14:36,065 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 05:14:54] 2024-05-18 09:14:36,065 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 05:14:54] 2024-05-18 09:14:36,065 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 05:14:54] 2024-05-18 09:14:36,065 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 05:14:54] 2024-05-18 09:14:36,065 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 05:14:54] 2024-05-18 09:14:36,065 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 05:14:54] 2024-05-18 09:14:36,065 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 05:14:54] 2024-05-18 09:14:36,065 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 05:14:54] 2024-05-18 09:14:36,065 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 05:14:54] 2024-05-18 09:14:36,066 | INFO     | job 6208472581 has completed (purged errors)
[2024-05-18 05:14:54] 2024-05-18 09:14:36,066 | INFO     | overall cleanup function is called
[2024-05-18 05:14:54] 2024-05-18 09:14:37,080 | INFO     | --- collectZombieJob: --- 10, [87222]
[2024-05-18 05:14:54] 2024-05-18 09:14:37,081 | INFO     | zombie collector waiting for pid 87222
[2024-05-18 05:14:54] 2024-05-18 09:14:37,081 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 05:14:54] 2024-05-18 09:14:38,087 | INFO     | collected zombie processes
[2024-05-18 05:14:54] 2024-05-18 09:14:38,087 | INFO     | will now attempt to kill all subprocesses of pid=87222
[2024-05-18 05:14:54] 2024-05-18 09:14:38,388 | INFO     | process IDs to be killed: [87222] (in reverse order)
[2024-05-18 05:14:54] 2024-05-18 09:14:39,216 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 05:14:54] 2024-05-18 09:14:39,216 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 05:14:54] 2024-05-18 09:14:39,228 | INFO     | did not find any defunct processes belonging to 87222
[2024-05-18 05:14:54] 2024-05-18 09:14:39,239 | INFO     | did not find any defunct processes belonging to 87222
[2024-05-18 05:14:54] 2024-05-18 09:14:39,239 | INFO     | ready for new job
[2024-05-18 05:14:54] 2024-05-18 09:14:39,240 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 05:14:54] 2024-05-18 09:14:39,241 | INFO     | *************************************
[2024-05-18 05:14:54] 2024-05-18 09:14:39,241 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 05:14:54] 2024-05-18 09:14:39,241 | INFO     | *************************************
[2024-05-18 05:14:54] 2024-05-18 09:14:39,241 | INFO     | 
[2024-05-18 05:14:54] 2024-05-18 09:14:39,246 | INFO     | architecture information:
[2024-05-18 05:14:54] 2024-05-18 09:14:39,257 | INFO     | executing command: cat /etc/os-release
[2024-05-18 05:14:54] 2024-05-18 09:14:39,468 | INFO     | cat /etc/os-release:
[2024-05-18 05:14:54] NAME="CentOS Linux"
[2024-05-18 05:14:54] VERSION="7 (Core)"
[2024-05-18 05:14:54] ID="centos"
[2024-05-18 05:14:54] ID_LIKE="rhel fedora"
[2024-05-18 05:14:54] VERSION_ID="7"
[2024-05-18 05:14:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 05:14:54] ANSI_COLOR="0;31"
[2024-05-18 05:14:54] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 05:14:54] HOME_URL="https://www.centos.org/"
[2024-05-18 05:14:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 05:14:54] 
[2024-05-18 05:14:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 05:14:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 05:14:54] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 05:14:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 05:14:54] 
[2024-05-18 05:14:54] 2024-05-18 09:14:39,468 | INFO     | *************************************
[2024-05-18 05:14:54] 2024-05-18 09:14:39,972 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2024-05-18 05:14:54] 2024-05-18 09:14:40,104 | INFO     | sufficient remaining disk space (99421782016 B)
[2024-05-18 05:14:54] 2024-05-18 09:14:40,104 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 05:14:54] 2024-05-18 09:14:40,105 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 05:14:54] 2024-05-18 09:14:40,105 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 05:14:54] 2024-05-18 09:14:40,292 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 05:14:54] 2024-05-18 09:14:40,292 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 05:14:54] 2024-05-18 09:14:40,292 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 05:14:54] 2024-05-18 09:14:40,302 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-18 05:14:54] 2024-05-18 09:14:40,303 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-18 05:14:54] 2024-05-18 09:14:40,304 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 05:14:54] 2024-05-18 09:14:40,305 | INFO     | will abort loop
[2024-05-18 05:14:54] 2024-05-18 09:14:40,758 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 05:14:54] 2024-05-18 09:14:40,781 | INFO     | all data control threads have been joined
[2024-05-18 05:14:54] 2024-05-18 09:14:41,110 | INFO     | [job] retrieve thread has finished
[2024-05-18 05:14:54] 2024-05-18 09:14:41,311 | INFO     | [job] job monitor thread has finished
[2024-05-18 05:14:54] 2024-05-18 09:14:41,316 | INFO     | all payload control threads have been joined
[2024-05-18 05:14:54] 2024-05-18 09:14:41,333 | INFO     | [payload] validate_post thread has finished
[2024-05-18 05:14:54] 2024-05-18 09:14:41,373 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 05:14:54] 2024-05-18 09:14:41,448 | INFO     | all job control threads have been joined
[2024-05-18 05:14:54] 2024-05-18 09:14:41,694 | INFO     | [payload] failed_post thread has finished
[2024-05-18 05:14:54] 2024-05-18 09:14:41,764 | INFO     | [job] queue monitor thread has finished
[2024-05-18 05:14:54] 2024-05-18 09:14:41,787 | INFO     | [data] control thread has finished
[2024-05-18 05:14:54] 2024-05-18 09:14:41,792 | INFO     | [job] validate thread has finished
[2024-05-18 05:14:54] 2024-05-18 09:14:42,081 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 05:14:54] 2024-05-18 09:14:42,111 | INFO     | [data] copytool_out thread has finished
[2024-05-18 05:14:54] 2024-05-18 09:14:42,294 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 05:14:54] 2024-05-18 09:14:42,323 | INFO     | [payload] control thread has finished
[2024-05-18 05:14:54] 2024-05-18 09:14:42,453 | INFO     | [job] control thread has finished
[2024-05-18 05:14:54] 2024-05-18 09:14:42,510 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 05:14:54] 2024-05-18 09:14:42,576 | INFO     | [data] copytool_in thread has finished
[2024-05-18 05:14:54] 2024-05-18 09:14:42,856 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 05:14:54] 2024-05-18 09:14:46,865 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 05:14:54] 2024-05-18 09:14:47,380 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140648709523264)>', '<ExcThread(monitor, started 140648267101952)>']
[2024-05-18 05:14:54] 2024-05-18 09:14:48,338 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 05:14:54] 2024-05-18 09:14:48,339 | INFO     | [monitor] control thread has ended
[2024-05-18 05:14:54] 2024-05-18 09:14:52,406 | INFO     | all workflow threads have been joined
[2024-05-18 05:14:54] 2024-05-18 09:14:52,407 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 05:14:54] 2024-05-18 09:14:52,407 | INFO     | traces error code: 0
[2024-05-18 05:14:54] 2024-05-18 09:14:52,407 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 05:14:54] 2024-05-18 09:14:52,625 [wrapper] ==== pilot stdout END ====
[2024-05-18 05:14:54] 2024-05-18 09:14:52,630 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 05:14:54] 2024-05-18 09:14:52,663 [wrapper] pilotpid: 51064
[2024-05-18 05:14:54] 2024-05-18 09:14:52,687 [wrapper] Pilot exit status: 0
[2024-05-18 05:14:54] 2024-05-18 09:14:52,859 [wrapper] pandaids: 6208472581
[2024-05-18 05:14:54] 2024-05-18 09:14:53,151 [wrapper] cleanup: SIGTERM to supervisor_pilot 89064 51065
[2024-05-18 05:14:54] 2024-05-18 09:14:53,183 [wrapper] Test setup, not cleaning
[2024-05-18 05:14:54] 2024-05-18 09:14:53,206 [wrapper] ==== wrapper stdout END ====
[2024-05-18 05:14:54] 2024-05-18 09:14:53,215 [wrapper] ==== wrapper stderr END ====
[2024-05-18 05:14:54] 2024-05-18 09:14:53,237 [wrapper] apfmon messages muted
[2024-05-18 05:14:54]  *** Error codes and diagnostics ***
[2024-05-18 05:14:54]     "exeErrorCode": 0,
[2024-05-18 05:14:54]     "exeErrorDiag": "",
[2024-05-18 05:14:54]     "pilotErrorCode": 0,
[2024-05-18 05:14:54]     "pilotErrorDiag": "",
[2024-05-18 05:14:54]  *** Listing of results directory ***
[2024-05-18 05:14:54] total 836948
[2024-05-18 05:14:54] -rw-r--r-- 1 boincer umatlas    467845 May 17 21:53 pilot3.tar.gz
[2024-05-18 05:14:54] -rw-r--r-- 1 boincer umatlas      5633 May 17 22:07 queuedata.json
[2024-05-18 05:14:54] -rwx------ 1 boincer umatlas     32251 May 17 22:07 runpilot2-wrapper.sh
[2024-05-18 05:14:54] -rw-r--r-- 1 boincer umatlas       100 May 18 01:40 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 05:14:54] -rwxr-xr-x 1 boincer umatlas      7986 May 18 01:40 run_atlas
[2024-05-18 05:14:54] -rw-r--r-- 1 boincer umatlas       105 May 18 01:40 job.xml
[2024-05-18 05:14:54] -rw-r--r-- 2 boincer umatlas 602504668 May 18 01:40 EVNT.38776119._000119.pool.root.1
[2024-05-18 05:14:54] -rw-r--r-- 2 boincer umatlas     17537 May 18 01:40 start_atlas.sh
[2024-05-18 05:14:54] drwxrwx--x 2 boincer umatlas      4096 May 18 01:40 shared
[2024-05-18 05:14:54] -rw-r--r-- 2 boincer umatlas    480012 May 18 01:40 input.tar.gz
[2024-05-18 05:14:54] -rw-r--r-- 1 boincer umatlas         0 May 18 01:40 boinc_lockfile
[2024-05-18 05:14:54] -rw-r--r-- 1 boincer umatlas      2633 May 18 01:40 pandaJob.out
[2024-05-18 05:14:54] -rw------- 1 boincer umatlas       467 May 18 01:40 setup.sh.local
[2024-05-18 05:14:54] -rw------- 1 boincer umatlas   1019057 May 18 01:41 agis_schedconf.cvmfs.json
[2024-05-18 05:14:54] -rw------- 1 boincer umatlas   1324701 May 18 01:41 cric_ddmendpoints.json
[2024-05-18 05:14:54] drwx------ 4 boincer umatlas      4096 May 18 01:41 pilot3
[2024-05-18 05:14:54] -rw-r--r-- 1 boincer umatlas      6388 May 18 05:10 init_data.xml
[2024-05-18 05:14:54] -rw------- 1 boincer umatlas 247875937 May 18 05:12 HITS.38776125._015648.pool.root.1
[2024-05-18 05:14:54] -rw-r--r-- 1 boincer umatlas       532 May 18 05:12 boinc_task_state.xml
[2024-05-18 05:14:54] -rw------- 1 boincer umatlas      1082 May 18 05:13 memory_monitor_summary.json
[2024-05-18 05:14:54] -rw------- 1 boincer umatlas         0 May 18 05:13 agis_ddmendpoints.agis.ALL.json
[2024-05-18 05:14:54] -rw------- 1 boincer umatlas    390130 May 18 05:13 log.38776125._015648.job.log.tgz.1
[2024-05-18 05:14:54] -rw------- 1 boincer umatlas        95 May 18 05:14 pilot_heartbeat.json
[2024-05-18 05:14:54] -rw------- 1 boincer umatlas      7755 May 18 05:14 heartbeat.json
[2024-05-18 05:14:54] -rw------- 1 boincer umatlas      4397 May 18 05:14 pilotlog.txt
[2024-05-18 05:14:54] -rw------- 1 boincer umatlas   1172630 May 18 05:14 log.38776125._015648.job.log.1
[2024-05-18 05:14:54] -rw-r--r-- 1 boincer umatlas        28 May 18 05:14 wrapper_checkpoint.txt
[2024-05-18 05:14:54] -rw------- 1 boincer umatlas       357 May 18 05:14 output.list
[2024-05-18 05:14:54] -rw-r--r-- 1 boincer umatlas      8192 May 18 05:14 boinc_mmap_file
[2024-05-18 05:14:54] -rw-r--r-- 1 boincer umatlas       620 May 18 05:14 runtime_log
[2024-05-18 05:14:54] -rw------- 1 boincer umatlas   1576960 May 18 05:14 result.tar.gz
[2024-05-18 05:14:54] -rw-r--r-- 1 boincer umatlas     11405 May 18 05:14 runtime_log.err
[2024-05-18 05:14:54] -rw------- 1 boincer umatlas       651 May 18 05:14 n6HNDm0eOS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmwsRKDmXAa0pn.diag
[2024-05-18 05:14:54] -rw-r--r-- 1 boincer umatlas     21843 May 18 05:14 stderr.txt
[2024-05-18 05:14:54] HITS file was successfully produced:
[2024-05-18 05:14:54] -rw------- 1 boincer umatlas 247875937 May 18 05:12 shared/HITS.pool.root.1
[2024-05-18 05:14:54]  *** Contents of shared directory: ***
[2024-05-18 05:14:54] total 832492
[2024-05-18 05:14:54] -rw-r--r-- 2 boincer umatlas 602504668 May 18 01:40 ATLAS.root_0
[2024-05-18 05:14:54] -rw-r--r-- 2 boincer umatlas     17537 May 18 01:40 start_atlas.sh
[2024-05-18 05:14:54] -rw-r--r-- 2 boincer umatlas    480012 May 18 01:40 input.tar.gz
[2024-05-18 05:14:54] -rw------- 1 boincer umatlas 247875937 May 18 05:12 HITS.pool.root.1
[2024-05-18 05:14:54] -rw------- 1 boincer umatlas   1576960 May 18 05:14 result.tar.gz
05:14:56 (37323): run_atlas exited; CPU time 41423.574426
05:14:56 (37323): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN