Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
11:00:58 (215260): wrapper (7.7.26015): starting
11:00:58 (215260): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 11:00:58] Arguments: --nthreads 12
[2024-05-18 11:00:58] Threads: 12
[2024-05-18 11:00:58] Checking for CVMFS
[2024-05-18 11:00:58] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 11:00:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 11:00:58] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 11:00:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 11:00:58] 2.10.1.0 136058 185248 151256 132886 3 294 26846957 45568000 6117 130560 0 599450395 99.725 424192072 13849 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-05-18 11:00:58] CVMFS is ok
[2024-05-18 11:00:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 11:00:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 11:00:58] Further information can be found at the LHC@home message board.
[2024-05-18 11:00:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 11:00:58] Checking for apptainer binary...
[2024-05-18 11:00:58] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 11:00:58] Running /usr/bin/apptainer --version
[2024-05-18 11:00:58] apptainer version 1.1.8-1.el7
[2024-05-18 11:00:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 11:00:59] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0039.triumf.lcg
[2024-05-18 11:00:59] apptainer works
[2024-05-18 11:00:59] Set ATHENA_PROC_NUMBER=12
[2024-05-18 11:00:59] Set ATHENA_CORE_NUMBER=12
[2024-05-18 11:00:59] Starting ATLAS job with PandaID=6208469080
[2024-05-18 11:00:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 21:40:30]  *** The last 200 lines of the pilot log: ***
[2024-05-18 21:40:30] 2024-05-19 04:40:05,260 | INFO     | job 6208469080 has state=finished
[2024-05-18 21:40:30] 2024-05-19 04:40:05,260 | INFO     | preparing for final server update for job 6208469080 in state='finished'
[2024-05-18 21:40:30] 2024-05-19 04:40:05,261 | INFO     | this job has now completed (state=finished)
[2024-05-18 21:40:30] 2024-05-19 04:40:05,262 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-18 21:40:30] 2024-05-19 04:40:05,262 | INFO     | job 6208469080 has finished - writing final server update
[2024-05-18 21:40:30] 2024-05-19 04:40:05,262 | INFO     | total number of processed events: 1950 (read)
[2024-05-18 21:40:30] 2024-05-19 04:40:05,269 | INFO     | executing command: lscpu
[2024-05-18 21:40:30] 2024-05-19 04:40:05,330 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-18 21:40:30] 2024-05-19 04:40:05,331 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 21:40:30] 2024-05-19 04:40:05,390 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 21:40:30] 2024-05-19 04:40:06,234 | INFO     | monitor loop #2459: job 0:6208469080 is in state 'finished'
[2024-05-18 21:40:30] 2024-05-19 04:40:06,234 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 21:40:30] 2024-05-19 04:40:08,737 | INFO     | monitor loop #2460: job 0:6208469080 is in state 'finished'
[2024-05-18 21:40:30] 2024-05-19 04:40:08,738 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 21:40:30] 2024-05-19 04:40:09,317 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-18 21:40:30] 2024-05-19 04:40:09,317 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6208469080/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 21:40:30] 2024-05-19 04:40:09,318 | INFO     | extracted standard info from prmon json
[2024-05-18 21:40:30] 2024-05-19 04:40:09,318 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 21:40:30] 2024-05-19 04:40:09,318 | WARNING  | GPU info not found in prmon json
[2024-05-18 21:40:30] 2024-05-19 04:40:09,324 | INFO     | fitting pss+swap vs Time
[2024-05-18 21:40:30] 2024-05-19 04:40:09,324 | INFO     | model: linear, x: [1716055294.0, 1716055355.0, 1716055416.0, 1716055477.0, 1716055538.0, 1716055599.0, 1716055660.0, 1716055721.0, 1716055782.0, 1716055843.0, 1716
[2024-05-18 21:40:30] 2024-05-19 04:40:09,325 | INFO     | sum of square deviations: 76700765811.97438
[2024-05-18 21:40:30] 2024-05-19 04:40:09,330 | INFO     | sum of deviations: 1549817279901.8743
[2024-05-18 21:40:30] 2024-05-19 04:40:09,330 | INFO     | mean x: 1716074406.9936204
[2024-05-18 21:40:30] 2024-05-19 04:40:09,330 | INFO     | mean y: 3926495.9681020733
[2024-05-18 21:40:30] 2024-05-19 04:40:09,330 | INFO     | -- intersect: -34671108901.66886
[2024-05-18 21:40:30] 2024-05-19 04:40:09,330 | INFO     | intersect: -34671108901.66886
[2024-05-18 21:40:30] 2024-05-19 04:40:09,331 | INFO     | chi2: 29.796914981667285
[2024-05-18 21:40:30] 2024-05-19 04:40:09,331 | INFO     | model: linear, x: [1716055294.0, 1716055355.0, 1716055416.0, 1716055477.0, 1716055538.0, 1716055599.0, 1716055660.0, 1716055721.0, 1716055782.0, 1716055843.0, 1716
[2024-05-18 21:40:30] 2024-05-19 04:40:09,331 | INFO     | sum of square deviations: 74869978481.40988
[2024-05-18 21:40:30] 2024-05-19 04:40:09,383 | INFO     | sum of deviations: 1858542717658.8838
[2024-05-18 21:40:30] 2024-05-19 04:40:09,383 | INFO     | mean x: 1716074253.7893891
[2024-05-18 21:40:30] 2024-05-19 04:40:09,383 | INFO     | mean y: 3952324.800643087
[2024-05-18 21:40:30] 2024-05-19 04:40:09,383 | INFO     | -- intersect: -42595195852.24999
[2024-05-18 21:40:30] 2024-05-19 04:40:09,384 | INFO     | intersect: -42595195852.24999
[2024-05-18 21:40:30] 2024-05-19 04:40:09,385 | INFO     | chi2: 26.136362291365142
[2024-05-18 21:40:30] 2024-05-19 04:40:09,385 | INFO     | current chi2=26.136362291365142 (change=12.285005654291119 %)
[2024-05-18 21:40:30] 2024-05-19 04:40:09,385 | INFO     | right removable region: 621
[2024-05-18 21:40:30] 2024-05-19 04:40:09,386 | INFO     | model: linear, x: [1716055599.0, 1716055660.0, 1716055721.0, 1716055782.0, 1716055843.0, 1716055904.0, 1716055965.0, 1716056026.0, 1716056087.0, 1716056148.0, 1716
[2024-05-18 21:40:30] 2024-05-19 04:40:09,386 | INFO     | sum of square deviations: 74882943514.68398
[2024-05-18 21:40:30] 2024-05-19 04:40:09,399 | INFO     | sum of deviations: 1233734784728.437
[2024-05-18 21:40:30] 2024-05-19 04:40:09,399 | INFO     | mean x: 1716074559.6543407
[2024-05-18 21:40:30] 2024-05-19 04:40:09,399 | INFO     | mean y: 3953032.4485530546
[2024-05-18 21:40:30] 2024-05-19 04:40:09,400 | INFO     | -- intersect: -28269252828.081387
[2024-05-18 21:40:30] 2024-05-19 04:40:09,400 | INFO     | intersect: -28269252828.081387
[2024-05-18 21:40:30] 2024-05-19 04:40:09,401 | INFO     | chi2: 25.888873221401898
[2024-05-18 21:40:30] 2024-05-19 04:40:09,401 | INFO     | current chi2=25.888873221401898 (change=13.115591874762309 %)
[2024-05-18 21:40:30] 2024-05-19 04:40:09,401 | INFO     | left removable region: 10
[2024-05-18 21:40:30] 2024-05-19 04:40:09,402 | INFO     | model: linear, x: [1716055904.0, 1716055965.0, 1716056026.0, 1716056087.0, 1716056148.0, 1716056209.0, 1716056270.0, 1716056331.0, 1716056392.0, 1716056453.0, 1716
[2024-05-18 21:40:30] 2024-05-19 04:40:09,402 | INFO     | sum of square deviations: 70970064029.76678
[2024-05-18 21:40:30] 2024-05-19 04:40:09,413 | INFO     | sum of deviations: 1315149875748.468
[2024-05-18 21:40:30] 2024-05-19 04:40:09,413 | INFO     | mean x: 1716074528.4599018
[2024-05-18 21:40:30] 2024-05-19 04:40:09,413 | INFO     | mean y: 4009325.16202946
[2024-05-18 21:40:30] 2024-05-19 04:40:09,413 | INFO     | -- intersect: -31796655275.232685
[2024-05-18 21:40:30] 2024-05-19 04:40:09,413 | INFO     | intersect: -31796655275.232685
[2024-05-18 21:40:30] 2024-05-19 04:40:09,414 | INFO     | chi2: 18.397011130854633
[2024-05-18 21:40:30] 2024-05-19 04:40:09,414 | INFO     | -- intersect: -31796655275.232685
[2024-05-18 21:40:30] 2024-05-19 04:40:09,414 | INFO     | current memory leak: 18.53 B/s (using 611 data points, chi2=18.40)
[2024-05-18 21:40:30] 2024-05-19 04:40:09,415 | INFO     | ..............................
[2024-05-18 21:40:30] 2024-05-19 04:40:09,416 | INFO     | . Timing measurements:
[2024-05-18 21:40:30] 2024-05-19 04:40:09,416 | INFO     | . get job = 0 s
[2024-05-18 21:40:30] 2024-05-19 04:40:09,416 | INFO     | . initial setup = 2 s
[2024-05-18 21:40:30] 2024-05-19 04:40:09,416 | INFO     | . payload setup = 7 s
[2024-05-18 21:40:30] 2024-05-19 04:40:09,416 | INFO     | . stage-in = 0 s
[2024-05-18 21:40:30] 2024-05-19 04:40:09,416 | INFO     | . payload execution = 38309 s
[2024-05-18 21:40:30] 2024-05-19 04:40:09,416 | INFO     | . stage-out = 3 s
[2024-05-18 21:40:30] 2024-05-19 04:40:09,416 | INFO     | . log creation = 0 s
[2024-05-18 21:40:30] 2024-05-19 04:40:09,416 | INFO     | ..............................
[2024-05-18 21:40:30] 2024-05-19 04:40:09,499 | INFO     | 
[2024-05-18 21:40:30] 2024-05-19 04:40:09,500 | INFO     | job summary report
[2024-05-18 21:40:30] 2024-05-19 04:40:09,500 | INFO     | --------------------------------------------------
[2024-05-18 21:40:30] 2024-05-19 04:40:09,500 | INFO     | PanDA job id: 6208469080
[2024-05-18 21:40:30] 2024-05-19 04:40:09,500 | INFO     | task id: 38734053
[2024-05-18 21:40:30] 2024-05-19 04:40:09,500 | INFO     | errors: (none)
[2024-05-18 21:40:30] 2024-05-19 04:40:09,500 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 21:40:30] 2024-05-19 04:40:09,500 | INFO     | pilot state: finished 
[2024-05-18 21:40:30] 2024-05-19 04:40:09,500 | INFO     | transexitcode: 0
[2024-05-18 21:40:30] 2024-05-19 04:40:09,500 | INFO     | exeerrorcode: 0
[2024-05-18 21:40:30] 2024-05-19 04:40:09,500 | INFO     | exeerrordiag: 
[2024-05-18 21:40:30] 2024-05-19 04:40:09,500 | INFO     | exitcode: 0
[2024-05-18 21:40:30] 2024-05-19 04:40:09,500 | INFO     | exitmsg: OK
[2024-05-18 21:40:30] 2024-05-19 04:40:09,500 | INFO     | cpuconsumptiontime: 208603 s
[2024-05-18 21:40:30] 2024-05-19 04:40:09,500 | INFO     | nevents: 1950
[2024-05-18 21:40:30] 2024-05-19 04:40:09,500 | INFO     | neventsw: 0
[2024-05-18 21:40:30] 2024-05-19 04:40:09,500 | INFO     | pid: 226544
[2024-05-18 21:40:30] 2024-05-19 04:40:09,500 | INFO     | pgrp: 226544
[2024-05-18 21:40:30] 2024-05-19 04:40:09,500 | INFO     | corecount: 12
[2024-05-18 21:40:30] 2024-05-19 04:40:09,500 | INFO     | event service: False
[2024-05-18 21:40:30] 2024-05-19 04:40:09,500 | INFO     | sizes: {0: 2392536, 4: 2392742, 11: 2392770, 38317: 2454633, 38321: 2463643, 38326: 2463809}
[2024-05-18 21:40:30] 2024-05-19 04:40:09,500 | INFO     | --------------------------------------------------
[2024-05-18 21:40:30] 2024-05-19 04:40:09,500 | INFO     | 
[2024-05-18 21:40:30] 2024-05-19 04:40:09,501 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 21:40:30] 2024-05-19 04:40:09,520 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 21:40:30] 2024-05-19 04:40:09,520 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 21:40:30] 2024-05-19 04:40:09,520 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 21:40:30] 2024-05-19 04:40:09,520 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 21:40:30] 2024-05-19 04:40:09,520 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 21:40:30] 2024-05-19 04:40:09,520 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 21:40:30] 2024-05-19 04:40:09,520 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 21:40:30] 2024-05-19 04:40:09,520 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 21:40:30] 2024-05-19 04:40:09,520 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 21:40:30] 2024-05-19 04:40:09,520 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 21:40:30] 2024-05-19 04:40:09,520 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 21:40:30] 2024-05-19 04:40:09,520 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 21:40:30] 2024-05-19 04:40:09,520 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 21:40:30] 2024-05-19 04:40:09,520 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 21:40:30] 2024-05-19 04:40:09,521 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 21:40:30] 2024-05-19 04:40:09,521 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 21:40:30] 2024-05-19 04:40:09,521 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 21:40:30] 2024-05-19 04:40:09,521 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 21:40:30] 2024-05-19 04:40:09,521 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 21:40:30] 2024-05-19 04:40:09,521 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 21:40:30] 2024-05-19 04:40:09,521 | INFO     | job 6208469080 has completed (purged errors)
[2024-05-18 21:40:30] 2024-05-19 04:40:09,521 | INFO     | overall cleanup function is called
[2024-05-18 21:40:30] 2024-05-19 04:40:10,533 | INFO     | --- collectZombieJob: --- 10, [226544]
[2024-05-18 21:40:30] 2024-05-19 04:40:10,533 | INFO     | zombie collector waiting for pid 226544
[2024-05-18 21:40:30] 2024-05-19 04:40:10,533 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 21:40:30] 2024-05-19 04:40:11,538 | INFO     | collected zombie processes
[2024-05-18 21:40:30] 2024-05-19 04:40:11,539 | INFO     | will now attempt to kill all subprocesses of pid=226544
[2024-05-18 21:40:30] 2024-05-19 04:40:11,659 | INFO     | process IDs to be killed: [226544] (in reverse order)
[2024-05-18 21:40:30] 2024-05-19 04:40:11,744 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 21:40:30] 2024-05-19 04:40:11,744 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 21:40:30] 2024-05-19 04:40:11,749 | INFO     | did not find any defunct processes belonging to 226544
[2024-05-18 21:40:30] 2024-05-19 04:40:11,752 | INFO     | did not find any defunct processes belonging to 226544
[2024-05-18 21:40:30] 2024-05-19 04:40:11,753 | INFO     | ready for new job
[2024-05-18 21:40:30] 2024-05-19 04:40:11,753 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 21:40:30] 2024-05-19 04:40:11,755 | INFO     | *************************************
[2024-05-18 21:40:30] 2024-05-19 04:40:11,755 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 21:40:30] 2024-05-19 04:40:11,755 | INFO     | *************************************
[2024-05-18 21:40:30] 2024-05-19 04:40:11,755 | INFO     | 
[2024-05-18 21:40:30] 2024-05-19 04:40:11,757 | INFO     | architecture information:
[2024-05-18 21:40:30] 2024-05-19 04:40:11,758 | INFO     | executing command: cat /etc/os-release
[2024-05-18 21:40:30] 2024-05-19 04:40:11,774 | INFO     | cat /etc/os-release:
[2024-05-18 21:40:30] NAME="CentOS Linux"
[2024-05-18 21:40:30] VERSION="7 (Core)"
[2024-05-18 21:40:30] ID="centos"
[2024-05-18 21:40:30] ID_LIKE="rhel fedora"
[2024-05-18 21:40:30] VERSION_ID="7"
[2024-05-18 21:40:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 21:40:30] ANSI_COLOR="0;31"
[2024-05-18 21:40:30] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 21:40:30] HOME_URL="https://www.centos.org/"
[2024-05-18 21:40:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 21:40:30] 
[2024-05-18 21:40:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 21:40:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 21:40:30] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 21:40:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 21:40:30] 
[2024-05-18 21:40:30] 2024-05-19 04:40:11,774 | INFO     | *************************************
[2024-05-18 21:40:30] 2024-05-19 04:40:12,279 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 21:40:30] 2024-05-19 04:40:12,298 | INFO     | sufficient remaining disk space (2112529367040 B)
[2024-05-18 21:40:30] 2024-05-19 04:40:12,299 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 21:40:30] 2024-05-19 04:40:12,299 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 21:40:30] 2024-05-19 04:40:12,299 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-18 21:40:30] 2024-05-19 04:40:12,299 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 21:40:30] 2024-05-19 04:40:12,300 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 21:40:30] 2024-05-19 04:40:12,300 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 21:40:30] 2024-05-19 04:40:12,300 | INFO     | aborting loop
[2024-05-18 21:40:30] 2024-05-19 04:40:12,300 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 21:40:30] 2024-05-19 04:40:12,301 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 21:40:30] 2024-05-19 04:40:12,695 | INFO     | all data control threads have been joined
[2024-05-18 21:40:30] 2024-05-19 04:40:13,214 | INFO     | all payload control threads have been joined
[2024-05-18 21:40:30] 2024-05-19 04:40:13,303 | INFO     | [job] job monitor thread has finished
[2024-05-18 21:40:30] 2024-05-19 04:40:13,304 | INFO     | [job] retrieve thread has finished
[2024-05-18 21:40:30] 2024-05-19 04:40:13,493 | INFO     | [data] copytool_in thread has finished
[2024-05-18 21:40:30] 2024-05-19 04:40:13,497 | INFO     | all job control threads have been joined
[2024-05-18 21:40:30] 2024-05-19 04:40:13,700 | INFO     | [data] control thread has finished
[2024-05-18 21:40:30] 2024-05-19 04:40:13,743 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 21:40:30] 2024-05-19 04:40:13,922 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 21:40:30] 2024-05-19 04:40:13,936 | INFO     | [job] validate thread has finished
[2024-05-18 21:40:30] 2024-05-19 04:40:13,940 | INFO     | [payload] failed_post thread has finished
[2024-05-18 21:40:30] 2024-05-19 04:40:14,220 | INFO     | [payload] control thread has finished
[2024-05-18 21:40:30] 2024-05-19 04:40:14,305 | INFO     | [data] copytool_out thread has finished
[2024-05-18 21:40:30] 2024-05-19 04:40:14,501 | INFO     | [job] control thread has finished
[2024-05-18 21:40:30] 2024-05-19 04:40:14,509 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 21:40:30] 2024-05-19 04:40:14,547 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 21:40:30] 2024-05-19 04:40:14,600 | INFO     | [payload] validate_post thread has finished
[2024-05-18 21:40:30] 2024-05-19 04:40:15,208 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 21:40:30] 2024-05-19 04:40:15,514 | INFO     | [job] queue monitor thread has finished
[2024-05-18 21:40:30] 2024-05-19 04:40:19,214 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 21:40:30] 2024-05-19 04:40:22,786 | INFO     | job.realtimelogging is not enabled
[2024-05-18 21:40:30] 2024-05-19 04:40:23,791 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 21:40:30] 2024-05-19 04:40:24,447 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139720761640768)>', '<ExcThread(monitor, started 139720478664448)>']
[2024-05-18 21:40:30] 2024-05-19 04:40:25,356 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 21:40:30] 2024-05-19 04:40:25,356 | INFO     | [monitor] control thread has ended
[2024-05-18 21:40:30] 2024-05-19 04:40:29,472 | INFO     | all workflow threads have been joined
[2024-05-18 21:40:30] 2024-05-19 04:40:29,473 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 21:40:30] 2024-05-19 04:40:29,473 | INFO     | traces error code: 0
[2024-05-18 21:40:30] 2024-05-19 04:40:29,477 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 21:40:30] 2024-05-19 04:40:29,590 [wrapper] ==== pilot stdout END ====
[2024-05-18 21:40:30] 2024-05-19 04:40:29,592 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 21:40:30] 2024-05-19 04:40:29,594 [wrapper] pilotpid: 219452
[2024-05-18 21:40:30] 2024-05-19 04:40:29,596 [wrapper] Pilot exit status: 0
[2024-05-18 21:40:30] 2024-05-19 04:40:29,606 [wrapper] pandaids: 6208469080
[2024-05-18 21:40:30] 2024-05-19 04:40:29,652 [wrapper] cleanup: SIGTERM to supervisor_pilot 264259 219453
[2024-05-18 21:40:30] 2024-05-19 04:40:29,654 [wrapper] Test setup, not cleaning
[2024-05-18 21:40:30] 2024-05-19 04:40:29,656 [wrapper] ==== wrapper stdout END ====
[2024-05-18 21:40:30] 2024-05-19 04:40:29,658 [wrapper] ==== wrapper stderr END ====
[2024-05-18 21:40:30] 2024-05-19 04:40:29,661 [wrapper] apfmon messages muted
[2024-05-18 21:40:30]  *** Error codes and diagnostics ***
[2024-05-18 21:40:30]     "exeErrorCode": 0,
[2024-05-18 21:40:30]     "exeErrorDiag": "",
[2024-05-18 21:40:30]     "pilotErrorCode": 0,
[2024-05-18 21:40:30]     "pilotErrorDiag": "",
[2024-05-18 21:40:30]  *** Listing of results directory ***
[2024-05-18 21:40:30] total 1506872
[2024-05-18 21:40:30] -rw-r--r-- 1 boinc boinc     467845 May 17 18:34 pilot3.tar.gz
[2024-05-18 21:40:30] -rw-r--r-- 1 boinc boinc       5633 May 17 18:41 queuedata.json
[2024-05-18 21:40:30] -rwx------ 1 boinc boinc      32251 May 17 18:41 runpilot2-wrapper.sh
[2024-05-18 21:40:30] -rw-r--r-- 1 boinc boinc        100 May 18 11:00 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 21:40:30] -rwxr-xr-x 1 boinc boinc       7986 May 18 11:00 run_atlas
[2024-05-18 21:40:30] -rw-r--r-- 1 boinc boinc        105 May 18 11:00 job.xml
[2024-05-18 21:40:30] -rw-r--r-- 1 boinc boinc       6628 May 18 11:00 init_data.xml
[2024-05-18 21:40:30] -rw-r--r-- 2 boinc boinc  326396459 May 18 11:00 EVNT.38734051._000718.pool.root.1
[2024-05-18 21:40:30] -rw-r--r-- 2 boinc boinc      17537 May 18 11:00 start_atlas.sh
[2024-05-18 21:40:30] drwxrwx--x 2 boinc boinc       4096 May 18 11:00 shared
[2024-05-18 21:40:30] -rw-r--r-- 2 boinc boinc     480172 May 18 11:00 input.tar.gz
[2024-05-18 21:40:30] -rw-r--r-- 1 boinc boinc          0 May 18 11:00 boinc_lockfile
[2024-05-18 21:40:30] -rw-r--r-- 1 boinc boinc       2852 May 18 11:00 pandaJob.out
[2024-05-18 21:40:30] -rw------- 1 boinc boinc        424 May 18 11:01 setup.sh.local
[2024-05-18 21:40:30] -rw------- 1 boinc boinc    1019065 May 18 11:01 agis_schedconf.cvmfs.json
[2024-05-18 21:40:30] -rw------- 1 boinc boinc    1324701 May 18 11:01 cric_ddmendpoints.json
[2024-05-18 21:40:30] drwx------ 4 boinc boinc       4096 May 18 11:01 pilot3
[2024-05-18 21:40:30] -rw-r--r-- 1 boinc boinc        533 May 18 21:23 boinc_task_state.xml
[2024-05-18 21:40:30] -rw------- 1 boinc boinc 1200632134 May 18 21:39 HITS.38734053._008360.pool.root.1
[2024-05-18 21:40:30] -rw------- 1 boinc boinc       1067 May 18 21:40 memory_monitor_summary.json
[2024-05-18 21:40:30] -rw------- 1 boinc boinc          0 May 18 21:40 agis_ddmendpoints.agis.ALL.json
[2024-05-18 21:40:30] -rw------- 1 boinc boinc    2544024 May 18 21:40 log.38734053._008360.job.log.tgz.1
[2024-05-18 21:40:30] -rw------- 1 boinc boinc         95 May 18 21:40 pilot_heartbeat.json
[2024-05-18 21:40:30] -rw------- 1 boinc boinc      28321 May 18 21:40 heartbeat.json
[2024-05-18 21:40:30] -rw-r--r-- 1 boinc boinc       8192 May 18 21:40 boinc_mmap_file
[2024-05-18 21:40:30] -rw-r--r-- 1 boinc boinc         29 May 18 21:40 wrapper_checkpoint.txt
[2024-05-18 21:40:30] -rw------- 1 boinc boinc       4405 May 18 21:40 pilotlog.txt
[2024-05-18 21:40:30] -rw------- 1 boinc boinc    3670883 May 18 21:40 log.38734053._008360.job.log.1
[2024-05-18 21:40:30] -rw------- 1 boinc boinc        353 May 18 21:40 output.list
[2024-05-18 21:40:30] -rw-r--r-- 1 boinc boinc        620 May 18 21:40 runtime_log
[2024-05-18 21:40:30] -rw------- 1 boinc boinc    6256640 May 18 21:40 result.tar.gz
[2024-05-18 21:40:30] -rw------- 1 boinc boinc        664 May 18 21:40 USLKDm0FOS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmCrRKDmNlq4on.diag
[2024-05-18 21:40:30] -rw-r--r-- 1 boinc boinc      11287 May 18 21:40 runtime_log.err
[2024-05-18 21:40:30] -rw-r--r-- 1 boinc boinc      22156 May 18 21:40 stderr.txt
[2024-05-18 21:40:30] HITS file was successfully produced:
[2024-05-18 21:40:30] -rw------- 1 boinc boinc 1200632134 May 18 21:39 shared/HITS.pool.root.1
[2024-05-18 21:40:30]  *** Contents of shared directory: ***
[2024-05-18 21:40:30] total 1497852
[2024-05-18 21:40:30] -rw-r--r-- 2 boinc boinc  326396459 May 18 11:00 ATLAS.root_0
[2024-05-18 21:40:30] -rw-r--r-- 2 boinc boinc      17537 May 18 11:00 start_atlas.sh
[2024-05-18 21:40:30] -rw-r--r-- 2 boinc boinc     480172 May 18 11:00 input.tar.gz
[2024-05-18 21:40:30] -rw------- 1 boinc boinc 1200632134 May 18 21:39 HITS.pool.root.1
[2024-05-18 21:40:30] -rw------- 1 boinc boinc    6256640 May 18 21:40 result.tar.gz
21:40:31 (215260): run_atlas exited; CPU time 200404.207256
21:40:31 (215260): called boinc_finish(0)

</stderr_txt>
]]>

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