Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
07:40:58 (242653): wrapper (7.7.26015): starting
07:40:58 (242653): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 07:40:58] Arguments: --nthreads 12
[2024-05-18 07:40:58] Threads: 12
[2024-05-18 07:40:58] Checking for CVMFS
[2024-05-18 07:40:58] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 07:40:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 07:40:58] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 07:40:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 07:40:59] 2.10.1.0 130235 10476 130624 132882 0 210 35175438 45568000 6733 130560 0 14991324 99.720 11789473 16504 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-05-18 07:40:59] CVMFS is ok
[2024-05-18 07:40:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 07:40:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 07:40:59] Further information can be found at the LHC@home message board.
[2024-05-18 07:40:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 07:40:59] Checking for apptainer binary...
[2024-05-18 07:40:59] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 07:40:59] Running /usr/bin/apptainer --version
[2024-05-18 07:40:59] apptainer version 1.1.8-1.el7
[2024-05-18 07:40:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 07:40:59] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0042.triumf.lcg
[2024-05-18 07:40:59] apptainer works
[2024-05-18 07:40:59] Set ATHENA_PROC_NUMBER=12
[2024-05-18 07:40:59] Set ATHENA_CORE_NUMBER=12
[2024-05-18 07:40:59] Starting ATLAS job with PandaID=6208469045
[2024-05-18 07:40:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 14:07:11]  *** The last 200 lines of the pilot log: ***
[2024-05-18 14:07:11] 2024-05-18 21:06:49,417 | INFO     | preparing for final server update for job 6208469045 in state='finished'
[2024-05-18 14:07:11] 2024-05-18 21:06:49,417 | INFO     | this job has now completed (state=finished)
[2024-05-18 14:07:11] 2024-05-18 21:06:49,418 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-18 14:07:11] 2024-05-18 21:06:49,418 | INFO     | job 6208469045 has finished - writing final server update
[2024-05-18 14:07:11] 2024-05-18 21:06:49,418 | INFO     | total number of processed events: 1950 (read)
[2024-05-18 14:07:11] 2024-05-18 21:06:49,421 | INFO     | executing command: lscpu
[2024-05-18 14:07:11] 2024-05-18 21:06:49,454 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-18 14:07:11] 2024-05-18 21:06:49,454 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 14:07:11] 2024-05-18 21:06:49,492 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 14:07:11] 2024-05-18 21:06:51,902 | INFO     | monitor loop #1722: job 0:6208469045 is in state 'finished'
[2024-05-18 14:07:11] 2024-05-18 21:06:51,902 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 14:07:11] 2024-05-18 21:06:54,403 | INFO     | monitor loop #1723: job 0:6208469045 is in state 'finished'
[2024-05-18 14:07:11] 2024-05-18 21:06:54,403 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 14:07:11] 2024-05-18 21:06:56,906 | INFO     | monitor loop #1724: job 0:6208469045 is in state 'finished'
[2024-05-18 14:07:11] 2024-05-18 21:06:56,906 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 14:07:11] 2024-05-18 21:06:57,640 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-18 14:07:11] 2024-05-18 21:06:57,641 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6208469045/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 14:07:11] 2024-05-18 21:06:57,642 | INFO     | extracted standard info from prmon json
[2024-05-18 14:07:11] 2024-05-18 21:06:57,642 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 14:07:11] 2024-05-18 21:06:57,643 | WARNING  | GPU info not found in prmon json
[2024-05-18 14:07:11] 2024-05-18 21:06:57,649 | INFO     | fitting pss+swap vs Time
[2024-05-18 14:07:11] 2024-05-18 21:06:57,650 | INFO     | model: linear, x: [1716043297.0, 1716043358.0, 1716043419.0, 1716043480.0, 1716043541.0, 1716043602.0, 1716043663.0, 1716043724.0, 1716043785.0, 1716043846.0, 1716
[2024-05-18 14:07:11] 2024-05-18 21:06:57,650 | INFO     | sum of square deviations: 16881915443.071192
[2024-05-18 14:07:11] 2024-05-18 21:06:57,652 | INFO     | sum of deviations: 966356921467.5483
[2024-05-18 14:07:11] 2024-05-18 21:06:57,652 | INFO     | mean x: 1716054826.8153033
[2024-05-18 14:07:11] 2024-05-18 21:06:57,653 | INFO     | mean y: 3755618.8364116093
[2024-05-18 14:07:11] 2024-05-18 21:06:57,653 | INFO     | -- intersect: -98226890370.53114
[2024-05-18 14:07:11] 2024-05-18 21:06:57,653 | INFO     | intersect: -98226890370.53114
[2024-05-18 14:07:11] 2024-05-18 21:06:57,653 | INFO     | chi2: 24.40774784215734
[2024-05-18 14:07:11] 2024-05-18 21:06:57,653 | INFO     | model: linear, x: [1716043297.0, 1716043358.0, 1716043419.0, 1716043480.0, 1716043541.0, 1716043602.0, 1716043663.0, 1716043724.0, 1716043785.0, 1716043846.0, 1716
[2024-05-18 14:07:11] 2024-05-18 21:06:57,653 | INFO     | sum of square deviations: 16222676392.203176
[2024-05-18 14:07:11] 2024-05-18 21:06:57,656 | INFO     | sum of deviations: 1137823072733.3538
[2024-05-18 14:07:11] 2024-05-18 21:06:57,656 | INFO     | mean x: 1716054674.326203
[2024-05-18 14:07:11] 2024-05-18 21:06:57,656 | INFO     | mean y: 3795287.382352941
[2024-05-18 14:07:11] 2024-05-18 21:06:57,656 | INFO     | -- intersect: -120356529687.02837
[2024-05-18 14:07:11] 2024-05-18 21:06:57,656 | INFO     | intersect: -120356529687.02837
[2024-05-18 14:07:11] 2024-05-18 21:06:57,656 | INFO     | chi2: 20.856861397612725
[2024-05-18 14:07:11] 2024-05-18 21:06:57,656 | INFO     | current chi2=20.856861397612725 (change=14.54819374367464 %)
[2024-05-18 14:07:11] 2024-05-18 21:06:57,656 | INFO     | right removable region: 373
[2024-05-18 14:07:11] 2024-05-18 21:06:57,657 | INFO     | model: linear, x: [1716043602.0, 1716043663.0, 1716043724.0, 1716043785.0, 1716043846.0, 1716043907.0, 1716043968.0, 1716044029.0, 1716044090.0, 1716044151.0, 1716
[2024-05-18 14:07:11] 2024-05-18 21:06:57,657 | INFO     | sum of square deviations: 16222487902.203173
[2024-05-18 14:07:11] 2024-05-18 21:06:57,659 | INFO     | sum of deviations: 785318963241.9417
[2024-05-18 14:07:11] 2024-05-18 21:06:57,659 | INFO     | mean x: 1716054979.326203
[2024-05-18 14:07:11] 2024-05-18 21:06:57,659 | INFO     | mean y: 3797467.3529411764
[2024-05-18 14:07:11] 2024-05-18 21:06:57,659 | INFO     | -- intersect: -83069188954.63731
[2024-05-18 14:07:11] 2024-05-18 21:06:57,659 | INFO     | intersect: -83069188954.63731
[2024-05-18 14:07:11] 2024-05-18 21:06:57,660 | INFO     | chi2: 20.547383069060647
[2024-05-18 14:07:11] 2024-05-18 21:06:57,660 | INFO     | current chi2=20.547383069060647 (change=15.816144930951099 %)
[2024-05-18 14:07:11] 2024-05-18 21:06:57,660 | INFO     | left removable region: 10
[2024-05-18 14:07:11] 2024-05-18 21:06:57,660 | INFO     | model: linear, x: [1716043907.0, 1716043968.0, 1716044029.0, 1716044090.0, 1716044151.0, 1716044212.0, 1716044273.0, 1716044334.0, 1716044395.0, 1716044456.0, 1716
[2024-05-18 14:07:11] 2024-05-18 21:06:57,660 | INFO     | sum of square deviations: 14832878827.967022
[2024-05-18 14:07:11] 2024-05-18 21:06:57,662 | INFO     | sum of deviations: 829437698260.2643
[2024-05-18 14:07:11] 2024-05-18 21:06:57,662 | INFO     | mean x: 1716054948.8512397
[2024-05-18 14:07:11] 2024-05-18 21:06:57,662 | INFO     | mean y: 3887020.856749311
[2024-05-18 14:07:11] 2024-05-18 21:06:57,663 | INFO     | -- intersect: -95955952156.1206
[2024-05-18 14:07:11] 2024-05-18 21:06:57,663 | INFO     | intersect: -95955952156.1206
[2024-05-18 14:07:11] 2024-05-18 21:06:57,663 | INFO     | chi2: 13.242928113874095
[2024-05-18 14:07:11] 2024-05-18 21:06:57,663 | INFO     | -- intersect: -95955952156.1206
[2024-05-18 14:07:11] 2024-05-18 21:06:57,663 | INFO     | current memory leak: 55.92 B/s (using 363 data points, chi2=13.24)
[2024-05-18 14:07:11] 2024-05-18 21:06:57,664 | INFO     | ..............................
[2024-05-18 14:07:11] 2024-05-18 21:06:57,664 | INFO     | . Timing measurements:
[2024-05-18 14:07:11] 2024-05-18 21:06:57,664 | INFO     | . get job = 0 s
[2024-05-18 14:07:11] 2024-05-18 21:06:57,664 | INFO     | . initial setup = 2 s
[2024-05-18 14:07:11] 2024-05-18 21:06:57,664 | INFO     | . payload setup = 8 s
[2024-05-18 14:07:11] 2024-05-18 21:06:57,664 | INFO     | . stage-in = 0 s
[2024-05-18 14:07:11] 2024-05-18 21:06:57,664 | INFO     | . payload execution = 23106 s
[2024-05-18 14:07:11] 2024-05-18 21:06:57,664 | INFO     | . stage-out = 3 s
[2024-05-18 14:07:11] 2024-05-18 21:06:57,664 | INFO     | . log creation = 0 s
[2024-05-18 14:07:11] 2024-05-18 21:06:57,664 | INFO     | ..............................
[2024-05-18 14:07:11] 2024-05-18 21:06:57,866 | INFO     | 
[2024-05-18 14:07:11] 2024-05-18 21:06:57,866 | INFO     | job summary report
[2024-05-18 14:07:11] 2024-05-18 21:06:57,866 | INFO     | --------------------------------------------------
[2024-05-18 14:07:11] 2024-05-18 21:06:57,866 | INFO     | PanDA job id: 6208469045
[2024-05-18 14:07:11] 2024-05-18 21:06:57,866 | INFO     | task id: 38734053
[2024-05-18 14:07:11] 2024-05-18 21:06:57,866 | INFO     | errors: (none)
[2024-05-18 14:07:11] 2024-05-18 21:06:57,866 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 14:07:11] 2024-05-18 21:06:57,866 | INFO     | pilot state: finished 
[2024-05-18 14:07:11] 2024-05-18 21:06:57,866 | INFO     | transexitcode: 0
[2024-05-18 14:07:11] 2024-05-18 21:06:57,866 | INFO     | exeerrorcode: 0
[2024-05-18 14:07:11] 2024-05-18 21:06:57,866 | INFO     | exeerrordiag: 
[2024-05-18 14:07:11] 2024-05-18 21:06:57,867 | INFO     | exitcode: 0
[2024-05-18 14:07:11] 2024-05-18 21:06:57,867 | INFO     | exitmsg: OK
[2024-05-18 14:07:11] 2024-05-18 21:06:57,867 | INFO     | cpuconsumptiontime: 197442 s
[2024-05-18 14:07:11] 2024-05-18 21:06:57,867 | INFO     | nevents: 1950
[2024-05-18 14:07:11] 2024-05-18 21:06:57,867 | INFO     | neventsw: 0
[2024-05-18 14:07:11] 2024-05-18 21:06:57,867 | INFO     | pid: 253891
[2024-05-18 14:07:11] 2024-05-18 21:06:57,867 | INFO     | pgrp: 253891
[2024-05-18 14:07:11] 2024-05-18 21:06:57,867 | INFO     | corecount: 12
[2024-05-18 14:07:11] 2024-05-18 21:06:57,867 | INFO     | event service: False
[2024-05-18 14:07:11] 2024-05-18 21:06:57,867 | INFO     | sizes: {0: 2391081, 1: 2392614, 5: 2392820, 12: 2392876, 23119: 2447797, 23124: 2456751, 23125: 2456935, 23133: 2457157}
[2024-05-18 14:07:11] 2024-05-18 21:06:57,867 | INFO     | --------------------------------------------------
[2024-05-18 14:07:11] 2024-05-18 21:06:57,867 | INFO     | 
[2024-05-18 14:07:11] 2024-05-18 21:06:57,867 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 14:07:11] 2024-05-18 21:06:58,075 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 14:07:11] 2024-05-18 21:06:58,076 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 14:07:11] 2024-05-18 21:06:58,076 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 14:07:11] 2024-05-18 21:06:58,076 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 14:07:11] 2024-05-18 21:06:58,076 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 14:07:11] 2024-05-18 21:06:58,076 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 14:07:11] 2024-05-18 21:06:58,076 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 14:07:11] 2024-05-18 21:06:58,076 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 14:07:11] 2024-05-18 21:06:58,076 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 14:07:11] 2024-05-18 21:06:58,076 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 14:07:11] 2024-05-18 21:06:58,076 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 14:07:11] 2024-05-18 21:06:58,076 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 14:07:11] 2024-05-18 21:06:58,076 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 14:07:11] 2024-05-18 21:06:58,076 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 14:07:11] 2024-05-18 21:06:58,076 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 14:07:11] 2024-05-18 21:06:58,076 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 14:07:11] 2024-05-18 21:06:58,076 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 14:07:11] 2024-05-18 21:06:58,076 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 14:07:11] 2024-05-18 21:06:58,076 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 14:07:11] 2024-05-18 21:06:58,076 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 14:07:11] 2024-05-18 21:06:58,077 | INFO     | job 6208469045 has completed (purged errors)
[2024-05-18 14:07:11] 2024-05-18 21:06:58,077 | INFO     | overall cleanup function is called
[2024-05-18 14:07:11] 2024-05-18 21:06:59,085 | INFO     | --- collectZombieJob: --- 10, [253891]
[2024-05-18 14:07:11] 2024-05-18 21:06:59,085 | INFO     | zombie collector waiting for pid 253891
[2024-05-18 14:07:11] 2024-05-18 21:06:59,085 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 14:07:11] 2024-05-18 21:07:00,088 | INFO     | collected zombie processes
[2024-05-18 14:07:11] 2024-05-18 21:07:00,088 | INFO     | will now attempt to kill all subprocesses of pid=253891
[2024-05-18 14:07:11] 2024-05-18 21:07:00,160 | INFO     | process IDs to be killed: [253891] (in reverse order)
[2024-05-18 14:07:11] 2024-05-18 21:07:00,229 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 14:07:11] 2024-05-18 21:07:00,229 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 14:07:11] 2024-05-18 21:07:00,233 | INFO     | did not find any defunct processes belonging to 253891
[2024-05-18 14:07:11] 2024-05-18 21:07:00,236 | INFO     | did not find any defunct processes belonging to 253891
[2024-05-18 14:07:11] 2024-05-18 21:07:00,236 | INFO     | ready for new job
[2024-05-18 14:07:11] 2024-05-18 21:07:00,236 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 14:07:11] 2024-05-18 21:07:00,238 | INFO     | *************************************
[2024-05-18 14:07:11] 2024-05-18 21:07:00,238 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 14:07:11] 2024-05-18 21:07:00,238 | INFO     | *************************************
[2024-05-18 14:07:11] 2024-05-18 21:07:00,238 | INFO     | 
[2024-05-18 14:07:11] 2024-05-18 21:07:00,241 | INFO     | architecture information:
[2024-05-18 14:07:11] 2024-05-18 21:07:00,241 | INFO     | executing command: cat /etc/os-release
[2024-05-18 14:07:11] 2024-05-18 21:07:00,259 | INFO     | cat /etc/os-release:
[2024-05-18 14:07:11] NAME="CentOS Linux"
[2024-05-18 14:07:11] VERSION="7 (Core)"
[2024-05-18 14:07:11] ID="centos"
[2024-05-18 14:07:11] ID_LIKE="rhel fedora"
[2024-05-18 14:07:11] VERSION_ID="7"
[2024-05-18 14:07:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 14:07:11] ANSI_COLOR="0;31"
[2024-05-18 14:07:11] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 14:07:11] HOME_URL="https://www.centos.org/"
[2024-05-18 14:07:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 14:07:11] 
[2024-05-18 14:07:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 14:07:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 14:07:11] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 14:07:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 14:07:11] 
[2024-05-18 14:07:11] 2024-05-18 21:07:00,259 | INFO     | *************************************
[2024-05-18 14:07:11] 2024-05-18 21:07:00,762 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 14:07:11] 2024-05-18 21:07:00,789 | INFO     | sufficient remaining disk space (1961967484928 B)
[2024-05-18 14:07:11] 2024-05-18 21:07:00,790 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 14:07:11] 2024-05-18 21:07:00,790 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 14:07:11] 2024-05-18 21:07:00,791 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 14:07:11] 2024-05-18 21:07:00,791 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 14:07:11] 2024-05-18 21:07:00,791 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-18 14:07:11] 2024-05-18 21:07:00,791 | INFO     | aborting loop
[2024-05-18 14:07:11] 2024-05-18 21:07:00,792 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 14:07:11] 2024-05-18 21:07:00,792 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 14:07:11] 2024-05-18 21:07:00,792 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 14:07:11] 2024-05-18 21:07:01,257 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 14:07:11] 2024-05-18 21:07:01,345 | INFO     | all data control threads have been joined
[2024-05-18 14:07:11] 2024-05-18 21:07:01,549 | INFO     | all job control threads have been joined
[2024-05-18 14:07:11] 2024-05-18 21:07:01,796 | INFO     | [job] job monitor thread has finished
[2024-05-18 14:07:11] 2024-05-18 21:07:01,796 | INFO     | [job] retrieve thread has finished
[2024-05-18 14:07:11] 2024-05-18 21:07:01,867 | INFO     | [data] copytool_in thread has finished
[2024-05-18 14:07:11] 2024-05-18 21:07:01,942 | INFO     | all payload control threads have been joined
[2024-05-18 14:07:11] 2024-05-18 21:07:02,347 | INFO     | [data] control thread has finished
[2024-05-18 14:07:11] 2024-05-18 21:07:02,363 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 14:07:11] 2024-05-18 21:07:02,555 | INFO     | [job] control thread has finished
[2024-05-18 14:07:11] 2024-05-18 21:07:02,561 | INFO     | [payload] validate_post thread has finished
[2024-05-18 14:07:11] 2024-05-18 21:07:02,721 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 14:07:11] 2024-05-18 21:07:02,731 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 14:07:11] 2024-05-18 21:07:02,872 | INFO     | [payload] failed_post thread has finished
[2024-05-18 14:07:11] 2024-05-18 21:07:02,873 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 14:07:11] 2024-05-18 21:07:02,903 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 14:07:11] 2024-05-18 21:07:02,947 | INFO     | [payload] control thread has finished
[2024-05-18 14:07:11] 2024-05-18 21:07:02,956 | INFO     | [job] validate thread has finished
[2024-05-18 14:07:11] 2024-05-18 21:07:03,262 | INFO     | [data] copytool_out thread has finished
[2024-05-18 14:07:11] 2024-05-18 21:07:03,737 | INFO     | [job] queue monitor thread has finished
[2024-05-18 14:07:11] 2024-05-18 21:07:04,795 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 14:07:11] 2024-05-18 21:07:05,161 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140318082725696)>', '<ExcThread(monitor, started 140317878396672)>']
[2024-05-18 14:07:11] 2024-05-18 21:07:05,801 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 14:07:11] 2024-05-18 21:07:05,801 | INFO     | [monitor] control thread has ended
[2024-05-18 14:07:11] 2024-05-18 21:07:10,181 | INFO     | all workflow threads have been joined
[2024-05-18 14:07:11] 2024-05-18 21:07:10,181 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 14:07:11] 2024-05-18 21:07:10,181 | INFO     | traces error code: 0
[2024-05-18 14:07:11] 2024-05-18 21:07:10,182 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 14:07:11] 2024-05-18 21:07:10,256 [wrapper] ==== pilot stdout END ====
[2024-05-18 14:07:11] 2024-05-18 21:07:10,258 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 14:07:11] 2024-05-18 21:07:10,259 [wrapper] pilotpid: 246807
[2024-05-18 14:07:11] 2024-05-18 21:07:10,261 [wrapper] Pilot exit status: 0
[2024-05-18 14:07:11] 2024-05-18 21:07:10,281 [wrapper] pandaids: 6208469045
[2024-05-18 14:07:11] 2024-05-18 21:07:10,325 [wrapper] cleanup: SIGTERM to supervisor_pilot  98124 246808
[2024-05-18 14:07:11] 2024-05-18 21:07:10,334 [wrapper] Test setup, not cleaning
[2024-05-18 14:07:11] 2024-05-18 21:07:10,336 [wrapper] ==== wrapper stdout END ====
[2024-05-18 14:07:11] 2024-05-18 21:07:10,343 [wrapper] ==== wrapper stderr END ====
[2024-05-18 14:07:11] 2024-05-18 21:07:10,347 [wrapper] apfmon messages muted
[2024-05-18 14:07:11]  *** Error codes and diagnostics ***
[2024-05-18 14:07:11]     "exeErrorCode": 0,
[2024-05-18 14:07:11]     "exeErrorDiag": "",
[2024-05-18 14:07:11]     "pilotErrorCode": 0,
[2024-05-18 14:07:11]     "pilotErrorDiag": "",
[2024-05-18 14:07:11]  *** Listing of results directory ***
[2024-05-18 14:07:11] total 1497240
[2024-05-18 14:07:11] -rw-r--r-- 1 boinc boinc     467845 May 17 18:34 pilot3.tar.gz
[2024-05-18 14:07:11] -rwx------ 1 boinc boinc      32251 May 17 18:39 runpilot2-wrapper.sh
[2024-05-18 14:07:11] -rw-r--r-- 1 boinc boinc       5633 May 17 18:39 queuedata.json
[2024-05-18 14:07:11] -rw-r--r-- 1 boinc boinc        100 May 18 07:40 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 14:07:11] -rwxr-xr-x 1 boinc boinc       7986 May 18 07:40 run_atlas
[2024-05-18 14:07:11] -rw-r--r-- 1 boinc boinc        105 May 18 07:40 job.xml
[2024-05-18 14:07:11] -rw-r--r-- 1 boinc boinc       6625 May 18 07:40 init_data.xml
[2024-05-18 14:07:11] -rw-r--r-- 2 boinc boinc  328676704 May 18 07:40 EVNT.38734051._000571.pool.root.1
[2024-05-18 14:07:11] -rw-r--r-- 2 boinc boinc      17537 May 18 07:40 start_atlas.sh
[2024-05-18 14:07:11] drwxrwx--x 2 boinc boinc       4096 May 18 07:40 shared
[2024-05-18 14:07:11] -rw-r--r-- 2 boinc boinc     480165 May 18 07:40 input.tar.gz
[2024-05-18 14:07:11] -rw-r--r-- 1 boinc boinc          0 May 18 07:40 boinc_lockfile
[2024-05-18 14:07:11] -rw-r--r-- 1 boinc boinc       2852 May 18 07:40 pandaJob.out
[2024-05-18 14:07:11] -rw------- 1 boinc boinc        424 May 18 07:41 setup.sh.local
[2024-05-18 14:07:11] -rw------- 1 boinc boinc    1019426 May 18 07:41 agis_schedconf.cvmfs.json
[2024-05-18 14:07:11] -rw------- 1 boinc boinc    1324701 May 18 07:41 cric_ddmendpoints.json
[2024-05-18 14:07:11] drwx------ 4 boinc boinc       4096 May 18 07:41 pilot3
[2024-05-18 14:07:11] -rw-r--r-- 1 boinc boinc        533 May 18 13:55 boinc_task_state.xml
[2024-05-18 14:07:11] -rw------- 1 boinc boinc 1191542257 May 18 14:06 HITS.38734053._008344.pool.root.1
[2024-05-18 14:07:11] -rw------- 1 boinc boinc         95 May 18 14:06 pilot_heartbeat.json
[2024-05-18 14:07:11] -rw------- 1 boinc boinc       1070 May 18 14:06 memory_monitor_summary.json
[2024-05-18 14:07:11] -rw------- 1 boinc boinc          0 May 18 14:06 agis_ddmendpoints.agis.ALL.json
[2024-05-18 14:07:11] -rw------- 1 boinc boinc    2387720 May 18 14:06 log.38734053._008344.job.log.tgz.1
[2024-05-18 14:07:11] -rw------- 1 boinc boinc      28014 May 18 14:06 heartbeat.json
[2024-05-18 14:07:11] -rw-r--r-- 1 boinc boinc       8192 May 18 14:07 boinc_mmap_file
[2024-05-18 14:07:11] -rw-r--r-- 1 boinc boinc         29 May 18 14:07 wrapper_checkpoint.txt
[2024-05-18 14:07:11] -rw------- 1 boinc boinc       4333 May 18 14:07 pilotlog.txt
[2024-05-18 14:07:11] -rw------- 1 boinc boinc    2304191 May 18 14:07 log.38734053._008344.job.log.1
[2024-05-18 14:07:11] -rw------- 1 boinc boinc        353 May 18 14:07 output.list
[2024-05-18 14:07:11] -rw-r--r-- 1 boinc boinc        620 May 18 14:07 runtime_log
[2024-05-18 14:07:11] -rw------- 1 boinc boinc    4730880 May 18 14:07 result.tar.gz
[2024-05-18 14:07:11] -rw-r--r-- 1 boinc boinc      11287 May 18 14:07 runtime_log.err
[2024-05-18 14:07:11] -rw------- 1 boinc boinc        662 May 18 14:07 OIvKDmsDOS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmvqRKDm44ZDln.diag
[2024-05-18 14:07:11] -rw-r--r-- 1 boinc boinc      22246 May 18 14:07 stderr.txt
[2024-05-18 14:07:11] HITS file was successfully produced:
[2024-05-18 14:07:11] -rw------- 1 boinc boinc 1191542257 May 18 14:06 shared/HITS.pool.root.1
[2024-05-18 14:07:11]  *** Contents of shared directory: ***
[2024-05-18 14:07:11] total 1489712
[2024-05-18 14:07:11] -rw-r--r-- 2 boinc boinc  328676704 May 18 07:40 ATLAS.root_0
[2024-05-18 14:07:11] -rw-r--r-- 2 boinc boinc      17537 May 18 07:40 start_atlas.sh
[2024-05-18 14:07:11] -rw-r--r-- 2 boinc boinc     480165 May 18 07:40 input.tar.gz
[2024-05-18 14:07:11] -rw------- 1 boinc boinc 1191542257 May 18 14:06 HITS.pool.root.1
[2024-05-18 14:07:11] -rw------- 1 boinc boinc    4730880 May 18 14:07 result.tar.gz
14:07:12 (242653): run_atlas exited; CPU time 195648.522863
14:07:12 (242653): called boinc_finish(0)

</stderr_txt>
]]>

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