Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
01:22:06 (256556): wrapper (7.7.26015): starting
01:22:06 (256556): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 01:22:06] Arguments: --nthreads 12
[2024-05-18 01:22:06] Threads: 12
[2024-05-18 01:22:06] Checking for CVMFS
[2024-05-18 01:22:06] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 01:22:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 01:22:06] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 01:22:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 01:22:07] 2.10.1.0 209053 184669 188832 132872 3 103 43283015 45568000 12991 130560 0 1091070223 99.766 653956187 17033 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-05-18 01:22:07] CVMFS is ok
[2024-05-18 01:22:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 01:22:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 01:22:07] Further information can be found at the LHC@home message board.
[2024-05-18 01:22:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 01:22:07] Checking for apptainer binary...
[2024-05-18 01:22:07] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 01:22:07] Running /usr/bin/apptainer --version
[2024-05-18 01:22:07] apptainer version 1.1.8-1.el7
[2024-05-18 01:22:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 01:22:08] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0110.triumf.lcg
[2024-05-18 01:22:08] apptainer works
[2024-05-18 01:22:08] Set ATHENA_PROC_NUMBER=12
[2024-05-18 01:22:08] Set ATHENA_CORE_NUMBER=12
[2024-05-18 01:22:08] Starting ATLAS job with PandaID=6208378416
[2024-05-18 01:22:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 02:28:05]  *** The last 200 lines of the pilot log: ***
[2024-05-18 02:28:05]  filesize=371280
[2024-05-18 02:28:05]  filetype=log
[2024-05-18 02:28:05]  guid=f3a52615-959d-4f09-aad6-984d71170cbb
[2024-05-18 02:28:05]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-18 02:28:05]  is_tar=False
[2024-05-18 02:28:05]  lfn=log.38776104._014921.job.log.tgz.1
[2024-05-18 02:28:05]  mtime=0
[2024-05-18 02:28:05]  protocol_id=None
[2024-05-18 02:28:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-18 02:28:05]  replicas=None
[2024-05-18 02:28:05]  scope=mc23_13p6TeV
[2024-05-18 02:28:05]  status=None
[2024-05-18 02:28:05]  status_code=0
[2024-05-18 02:28:05]  storage_token=
[2024-05-18 02:28:05]  surl=/home/boinc/slots/0/PanDA_Pilot-6208378416/log.38776104._014921.job.log.tgz.1
[2024-05-18 02:28:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/43/97/log.38776104._014921.job.log.tgz.1
[2024-05-18 02:28:05]  workdir=None
[2024-05-18 02:28:05] ]
[2024-05-18 02:28:05] 2024-05-18 09:27:36,936 | INFO     | transferring file log.38776104._014921.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6208378416/log.38776104._014921.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-18 02:28:05] 2024-05-18 09:27:36,936 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6208378416/log.38776104._014921.job.log.tgz.1 /home/boinc/slots/0/log.38776104._014921.job.log.t
[2024-05-18 02:28:05] 2024-05-18 09:27:36,960 | INFO     | adding to output.list: log.38776104._014921.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/43/97/log.38776104._014921.job.log.tg
[2024-05-18 02:28:05] 2024-05-18 09:27:36,960 | INFO     | summary of transferred files:
[2024-05-18 02:28:05] 2024-05-18 09:27:36,960 | INFO     |  -- lfn=log.38776104._014921.job.log.tgz.1, status_code=0, status=transferred
[2024-05-18 02:28:05] 2024-05-18 09:27:36,961 | INFO     | stage-out finished correctly
[2024-05-18 02:28:05] 2024-05-18 09:27:37,781 | WARNING  | process 269295 is no longer using CPU - aborting
[2024-05-18 02:28:05] 2024-05-18 09:27:37,781 | INFO     | will not send any job update
[2024-05-18 02:28:05] 2024-05-18 09:27:38,263 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-18 02:28:05] 2024-05-18 09:27:38,337 | INFO     | job 6208378416 has state=finished
[2024-05-18 02:28:05] 2024-05-18 09:27:38,337 | INFO     | preparing for final server update for job 6208378416 in state='finished'
[2024-05-18 02:28:05] 2024-05-18 09:27:38,338 | INFO     | this job has now completed (state=finished)
[2024-05-18 02:28:05] 2024-05-18 09:27:38,338 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-18 02:28:05] 2024-05-18 09:27:38,338 | INFO     | job 6208378416 has finished - writing final server update
[2024-05-18 02:28:05] 2024-05-18 09:27:38,338 | INFO     | total number of processed events: 400 (read)
[2024-05-18 02:28:05] 2024-05-18 09:27:38,343 | INFO     | executing command: lscpu
[2024-05-18 02:28:05] 2024-05-18 09:27:38,398 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-18 02:28:05] 2024-05-18 09:27:38,398 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 02:28:05] 2024-05-18 09:27:38,462 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 02:28:05] 2024-05-18 09:27:40,284 | INFO     | monitor loop #307: job 0:6208378416 is in state 'finished'
[2024-05-18 02:28:05] 2024-05-18 09:27:40,285 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 02:28:05] 2024-05-18 09:27:42,356 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-18 02:28:05] 2024-05-18 09:27:42,356 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6208378416/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 02:28:05] 2024-05-18 09:27:42,357 | INFO     | extracted standard info from prmon json
[2024-05-18 02:28:05] 2024-05-18 09:27:42,357 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 02:28:05] 2024-05-18 09:27:42,357 | WARNING  | GPU info not found in prmon json
[2024-05-18 02:28:05] 2024-05-18 09:27:42,358 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 02:28:05] 2024-05-18 09:27:42,358 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 02:28:05] 2024-05-18 09:27:42,359 | INFO     | fitting pss+swap vs Time
[2024-05-18 02:28:05] 2024-05-18 09:27:42,359 | INFO     | model: linear, x: [1716020869.0, 1716020930.0, 1716020991.0, 1716021052.0, 1716021113.0, 1716021174.0, 1716021235.0, 1716021296.0, 1716021357.0, 1716021418.0, 1716
[2024-05-18 02:28:05] 2024-05-18 09:27:42,359 | INFO     | sum of square deviations: 57407588.0
[2024-05-18 02:28:05] 2024-05-18 09:27:42,359 | INFO     | sum of deviations: 19265586568.0
[2024-05-18 02:28:05] 2024-05-18 09:27:42,360 | INFO     | mean x: 1716022577.0
[2024-05-18 02:28:05] 2024-05-18 09:27:42,360 | INFO     | mean y: 2719259.8421052634
[2024-05-18 02:28:05] 2024-05-18 09:27:42,360 | INFO     | -- intersect: -575882501868.6948
[2024-05-18 02:28:05] 2024-05-18 09:27:42,360 | INFO     | intersect: -575882501868.6948
[2024-05-18 02:28:05] 2024-05-18 09:27:42,360 | INFO     | chi2: 2.249488464738594
[2024-05-18 02:28:05] 2024-05-18 09:27:42,360 | INFO     | -- intersect: -575882501868.6948
[2024-05-18 02:28:05] 2024-05-18 09:27:42,360 | INFO     | current memory leak: 335.59 B/s (using 57 data points, chi2=2.25)
[2024-05-18 02:28:05] 2024-05-18 09:27:42,360 | INFO     | ..............................
[2024-05-18 02:28:05] 2024-05-18 09:27:42,360 | INFO     | . Timing measurements:
[2024-05-18 02:28:05] 2024-05-18 09:27:42,360 | INFO     | . get job = 0 s
[2024-05-18 02:28:05] 2024-05-18 09:27:42,361 | INFO     | . initial setup = 2 s
[2024-05-18 02:28:05] 2024-05-18 09:27:42,361 | INFO     | . payload setup = 5 s
[2024-05-18 02:28:05] 2024-05-18 09:27:42,361 | INFO     | . stage-in = 0 s
[2024-05-18 02:28:05] 2024-05-18 09:27:42,361 | INFO     | . payload execution = 3891 s
[2024-05-18 02:28:05] 2024-05-18 09:27:42,361 | INFO     | . stage-out = 0 s
[2024-05-18 02:28:05] 2024-05-18 09:27:42,361 | INFO     | . log creation = 0 s
[2024-05-18 02:28:05] 2024-05-18 09:27:42,361 | INFO     | ..............................
[2024-05-18 02:28:05] 2024-05-18 09:27:42,429 | INFO     | 
[2024-05-18 02:28:05] 2024-05-18 09:27:42,430 | INFO     | job summary report
[2024-05-18 02:28:05] 2024-05-18 09:27:42,430 | INFO     | --------------------------------------------------
[2024-05-18 02:28:05] 2024-05-18 09:27:42,430 | INFO     | PanDA job id: 6208378416
[2024-05-18 02:28:05] 2024-05-18 09:27:42,430 | INFO     | task id: 38776104
[2024-05-18 02:28:05] 2024-05-18 09:27:42,430 | INFO     | errors: (none)
[2024-05-18 02:28:05] 2024-05-18 09:27:42,430 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 02:28:05] 2024-05-18 09:27:42,430 | INFO     | pilot state: finished 
[2024-05-18 02:28:05] 2024-05-18 09:27:42,430 | INFO     | transexitcode: 0
[2024-05-18 02:28:05] 2024-05-18 09:27:42,430 | INFO     | exeerrorcode: 0
[2024-05-18 02:28:05] 2024-05-18 09:27:42,430 | INFO     | exeerrordiag: 
[2024-05-18 02:28:05] 2024-05-18 09:27:42,430 | INFO     | exitcode: 0
[2024-05-18 02:28:05] 2024-05-18 09:27:42,430 | INFO     | exitmsg: OK
[2024-05-18 02:28:05] 2024-05-18 09:27:42,430 | INFO     | cpuconsumptiontime: 34548 s
[2024-05-18 02:28:05] 2024-05-18 09:27:42,430 | INFO     | nevents: 400
[2024-05-18 02:28:05] 2024-05-18 09:27:42,430 | INFO     | neventsw: 0
[2024-05-18 02:28:05] 2024-05-18 09:27:42,431 | INFO     | pid: 269295
[2024-05-18 02:28:05] 2024-05-18 09:27:42,431 | INFO     | pgrp: 269295
[2024-05-18 02:28:05] 2024-05-18 09:27:42,431 | INFO     | corecount: 12
[2024-05-18 02:28:05] 2024-05-18 09:27:42,431 | INFO     | event service: False
[2024-05-18 02:28:05] 2024-05-18 09:27:42,431 | INFO     | sizes: {0: 2392204, 4: 2392410, 11: 2392438, 3901: 2418222, 3903: 2427176, 3904: 2427232, 3908: 2427530}
[2024-05-18 02:28:05] 2024-05-18 09:27:42,431 | INFO     | --------------------------------------------------
[2024-05-18 02:28:05] 2024-05-18 09:27:42,431 | INFO     | 
[2024-05-18 02:28:05] 2024-05-18 09:27:42,431 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 02:28:05] 2024-05-18 09:27:42,461 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 02:28:05] 2024-05-18 09:27:42,462 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 02:28:05] 2024-05-18 09:27:42,462 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 02:28:05] 2024-05-18 09:27:42,462 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 02:28:05] 2024-05-18 09:27:42,462 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 02:28:05] 2024-05-18 09:27:42,462 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 02:28:05] 2024-05-18 09:27:42,462 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 02:28:05] 2024-05-18 09:27:42,462 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 02:28:05] 2024-05-18 09:27:42,462 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 02:28:05] 2024-05-18 09:27:42,462 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 02:28:05] 2024-05-18 09:27:42,462 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 02:28:05] 2024-05-18 09:27:42,462 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 02:28:05] 2024-05-18 09:27:42,462 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 02:28:05] 2024-05-18 09:27:42,462 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 02:28:05] 2024-05-18 09:27:42,462 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 02:28:05] 2024-05-18 09:27:42,463 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 02:28:05] 2024-05-18 09:27:42,463 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 02:28:05] 2024-05-18 09:27:42,463 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 02:28:05] 2024-05-18 09:27:42,463 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 02:28:05] 2024-05-18 09:27:42,463 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 02:28:05] 2024-05-18 09:27:42,463 | INFO     | job 6208378416 has completed (purged errors)
[2024-05-18 02:28:05] 2024-05-18 09:27:42,463 | INFO     | overall cleanup function is called
[2024-05-18 02:28:05] 2024-05-18 09:27:43,470 | INFO     | --- collectZombieJob: --- 10, [269295]
[2024-05-18 02:28:05] 2024-05-18 09:27:43,470 | INFO     | zombie collector waiting for pid 269295
[2024-05-18 02:28:05] 2024-05-18 09:27:43,471 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 02:28:05] 2024-05-18 09:27:44,475 | INFO     | collected zombie processes
[2024-05-18 02:28:05] 2024-05-18 09:27:44,475 | INFO     | will now attempt to kill all subprocesses of pid=269295
[2024-05-18 02:28:05] 2024-05-18 09:27:44,634 | INFO     | process IDs to be killed: [269295] (in reverse order)
[2024-05-18 02:28:05] 2024-05-18 09:27:44,742 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 02:28:05] 2024-05-18 09:27:44,742 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 02:28:05] 2024-05-18 09:27:44,749 | INFO     | did not find any defunct processes belonging to 269295
[2024-05-18 02:28:05] 2024-05-18 09:27:44,754 | INFO     | did not find any defunct processes belonging to 269295
[2024-05-18 02:28:05] 2024-05-18 09:27:44,755 | INFO     | ready for new job
[2024-05-18 02:28:05] 2024-05-18 09:27:44,755 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 02:28:05] 2024-05-18 09:27:44,756 | INFO     | *************************************
[2024-05-18 02:28:05] 2024-05-18 09:27:44,756 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 02:28:05] 2024-05-18 09:27:44,756 | INFO     | *************************************
[2024-05-18 02:28:05] 2024-05-18 09:27:44,756 | INFO     | 
[2024-05-18 02:28:05] 2024-05-18 09:27:44,759 | INFO     | architecture information:
[2024-05-18 02:28:05] 2024-05-18 09:27:44,759 | INFO     | executing command: cat /etc/os-release
[2024-05-18 02:28:05] 2024-05-18 09:27:44,774 | INFO     | cat /etc/os-release:
[2024-05-18 02:28:05] NAME="CentOS Linux"
[2024-05-18 02:28:05] VERSION="7 (Core)"
[2024-05-18 02:28:05] ID="centos"
[2024-05-18 02:28:05] ID_LIKE="rhel fedora"
[2024-05-18 02:28:05] VERSION_ID="7"
[2024-05-18 02:28:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 02:28:05] ANSI_COLOR="0;31"
[2024-05-18 02:28:05] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 02:28:05] HOME_URL="https://www.centos.org/"
[2024-05-18 02:28:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 02:28:05] 
[2024-05-18 02:28:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 02:28:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 02:28:05] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 02:28:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 02:28:05] 
[2024-05-18 02:28:05] 2024-05-18 09:27:44,774 | INFO     | *************************************
[2024-05-18 02:28:05] 2024-05-18 09:27:45,276 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 02:28:05] 2024-05-18 09:27:45,292 | INFO     | sufficient remaining disk space (2129097916416 B)
[2024-05-18 02:28:05] 2024-05-18 09:27:45,292 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 02:28:05] 2024-05-18 09:27:45,293 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 02:28:05] 2024-05-18 09:27:45,293 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 02:28:05] 2024-05-18 09:27:45,293 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 02:28:05] 2024-05-18 09:27:45,294 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-18 02:28:05] 2024-05-18 09:27:45,295 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-18 02:28:05] 2024-05-18 09:27:45,295 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 02:28:05] 2024-05-18 09:27:45,295 | INFO     | will abort loop
[2024-05-18 02:28:05] 2024-05-18 09:27:45,382 | INFO     | all data control threads have been joined
[2024-05-18 02:28:05] 2024-05-18 09:27:45,475 | INFO     | all payload control threads have been joined
[2024-05-18 02:28:05] 2024-05-18 09:27:45,743 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 02:28:05] 2024-05-18 09:27:45,743 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 02:28:05] 2024-05-18 09:27:45,744 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 02:28:05] 2024-05-18 09:27:46,297 | INFO     | [job] retrieve thread has finished
[2024-05-18 02:28:05] 2024-05-18 09:27:46,299 | INFO     | [job] job monitor thread has finished
[2024-05-18 02:28:05] 2024-05-18 09:27:46,387 | INFO     | [data] control thread has finished
[2024-05-18 02:28:05] 2024-05-18 09:27:46,480 | INFO     | [payload] control thread has finished
[2024-05-18 02:28:05] 2024-05-18 09:27:46,584 | INFO     | all job control threads have been joined
[2024-05-18 02:28:05] 2024-05-18 09:27:46,629 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 02:28:05] 2024-05-18 09:27:46,662 | INFO     | [job] validate thread has finished
[2024-05-18 02:28:05] 2024-05-18 09:27:47,015 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 02:28:05] 2024-05-18 09:27:47,298 | INFO     | [data] copytool_out thread has finished
[2024-05-18 02:28:05] 2024-05-18 09:27:47,303 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 02:28:05] 2024-05-18 09:27:47,443 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 02:28:05] 2024-05-18 09:27:47,468 | INFO     | [data] copytool_in thread has finished
[2024-05-18 02:28:05] 2024-05-18 09:27:47,589 | INFO     | [job] control thread has finished
[2024-05-18 02:28:05] 2024-05-18 09:27:47,706 | INFO     | [payload] validate_post thread has finished
[2024-05-18 02:28:05] 2024-05-18 09:27:47,872 | INFO     | [payload] failed_post thread has finished
[2024-05-18 02:28:05] 2024-05-18 09:27:48,449 | INFO     | [job] queue monitor thread has finished
[2024-05-18 02:28:05] 2024-05-18 09:27:49,298 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 02:28:05] 2024-05-18 09:27:56,338 | INFO     | job.realtimelogging is not enabled
[2024-05-18 02:28:05] 2024-05-18 09:27:57,344 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 02:28:05] 2024-05-18 09:27:58,973 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139745148643136)>', '<ExcThread(monitor, started 139744595924736)>']
[2024-05-18 02:28:05] 2024-05-18 09:27:59,813 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 02:28:05] 2024-05-18 09:27:59,814 | INFO     | [monitor] control thread has ended
[2024-05-18 02:28:05] 2024-05-18 09:28:03,998 | INFO     | all workflow threads have been joined
[2024-05-18 02:28:05] 2024-05-18 09:28:03,998 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 02:28:05] 2024-05-18 09:28:03,999 | INFO     | traces error code: 0
[2024-05-18 02:28:05] 2024-05-18 09:28:03,999 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 02:28:05] 2024-05-18 09:28:04,076 [wrapper] ==== pilot stdout END ====
[2024-05-18 02:28:05] 2024-05-18 09:28:04,079 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 02:28:05] 2024-05-18 09:28:04,082 [wrapper] pilotpid: 262771
[2024-05-18 02:28:05] 2024-05-18 09:28:04,085 [wrapper] Pilot exit status: 0
[2024-05-18 02:28:05] 2024-05-18 09:28:04,094 [wrapper] pandaids: 6208378416
[2024-05-18 02:28:05] 2024-05-18 09:28:04,165 [wrapper] cleanup: SIGTERM to supervisor_pilot 123270 262772
[2024-05-18 02:28:05] 2024-05-18 09:28:04,170 [wrapper] Test setup, not cleaning
[2024-05-18 02:28:05] 2024-05-18 09:28:04,173 [wrapper] ==== wrapper stdout END ====
[2024-05-18 02:28:05] 2024-05-18 09:28:04,175 [wrapper] ==== wrapper stderr END ====
[2024-05-18 02:28:05] 2024-05-18 09:28:04,181 [wrapper] apfmon messages muted
[2024-05-18 02:28:05]  *** Error codes and diagnostics ***
[2024-05-18 02:28:05]     "exeErrorCode": 0,
[2024-05-18 02:28:05]     "exeErrorDiag": "",
[2024-05-18 02:28:05]     "pilotErrorCode": 0,
[2024-05-18 02:28:05]     "pilotErrorDiag": "",
[2024-05-18 02:28:05]  *** Listing of results directory ***
[2024-05-18 02:28:05] total 818872
[2024-05-18 02:28:05] -rw-r--r-- 1 boinc boinc      5633 May 17 18:22 queuedata.json
[2024-05-18 02:28:05] -rwx------ 1 boinc boinc     32251 May 17 18:23 runpilot2-wrapper.sh
[2024-05-18 02:28:05] -rw-r--r-- 1 boinc boinc    467845 May 17 18:24 pilot3.tar.gz
[2024-05-18 02:28:05] -rw-r--r-- 1 boinc boinc       100 May 18 01:22 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 02:28:05] -rwxr-xr-x 1 boinc boinc      7986 May 18 01:22 run_atlas
[2024-05-18 02:28:05] -rw-r--r-- 1 boinc boinc       105 May 18 01:22 job.xml
[2024-05-18 02:28:05] -rw-r--r-- 2 boinc boinc 602114511 May 18 01:22 EVNT.38776100._000509.pool.root.1
[2024-05-18 02:28:05] -rw-r--r-- 2 boinc boinc     17537 May 18 01:22 start_atlas.sh
[2024-05-18 02:28:05] drwxrwx--x 2 boinc boinc      4096 May 18 01:22 shared
[2024-05-18 02:28:05] -rw-r--r-- 2 boinc boinc    480002 May 18 01:22 input.tar.gz
[2024-05-18 02:28:05] -rw-r--r-- 1 boinc boinc      6622 May 18 01:22 init_data.xml
[2024-05-18 02:28:05] -rw-r--r-- 1 boinc boinc         0 May 18 01:22 boinc_lockfile
[2024-05-18 02:28:05] -rw-r--r-- 1 boinc boinc      2644 May 18 01:22 pandaJob.out
[2024-05-18 02:28:05] -rw------- 1 boinc boinc       424 May 18 01:22 setup.sh.local
[2024-05-18 02:28:05] -rw------- 1 boinc boinc   1019073 May 18 01:22 agis_schedconf.cvmfs.json
[2024-05-18 02:28:05] -rw------- 1 boinc boinc         0 May 18 01:22 agis_ddmendpoints.agis.ALL.json
[2024-05-18 02:28:05] -rw------- 1 boinc boinc   1324701 May 18 01:22 cric_ddmendpoints.json
[2024-05-18 02:28:05] drwx------ 4 boinc boinc      4096 May 18 01:22 pilot3
[2024-05-18 02:28:05] -rw------- 1 boinc boinc 231334662 May 18 02:26 HITS.38776104._014921.pool.root.1
[2024-05-18 02:28:05] -rw-r--r-- 1 boinc boinc       530 May 18 02:26 boinc_task_state.xml
[2024-05-18 02:28:05] -rw------- 1 boinc boinc        95 May 18 02:27 pilot_heartbeat.json
[2024-05-18 02:28:05] -rw------- 1 boinc boinc      1056 May 18 02:27 memory_monitor_summary.json
[2024-05-18 02:28:05] -rw------- 1 boinc boinc    371280 May 18 02:27 log.38776104._014921.job.log.tgz.1
[2024-05-18 02:28:05] -rw------- 1 boinc boinc      7777 May 18 02:27 heartbeat.json
[2024-05-18 02:28:05] -rw-r--r-- 1 boinc boinc        27 May 18 02:28 wrapper_checkpoint.txt
[2024-05-18 02:28:05] -rw-r--r-- 1 boinc boinc      8192 May 18 02:28 boinc_mmap_file
[2024-05-18 02:28:05] -rw------- 1 boinc boinc      4468 May 18 02:28 pilotlog.txt
[2024-05-18 02:28:05] -rw------- 1 boinc boinc    397358 May 18 02:28 log.38776104._014921.job.log.1
[2024-05-18 02:28:05] -rw------- 1 boinc boinc       357 May 18 02:28 output.list
[2024-05-18 02:28:05] -rw-r--r-- 1 boinc boinc       620 May 18 02:28 runtime_log
[2024-05-18 02:28:05] -rw------- 1 boinc boinc    788480 May 18 02:28 result.tar.gz
[2024-05-18 02:28:05] -rw------- 1 boinc boinc       651 May 18 02:28 TbSMDmxyNS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmBpRKDmfi6Gzn.diag
[2024-05-18 02:28:05] -rw-r--r-- 1 boinc boinc     11286 May 18 02:28 runtime_log.err
[2024-05-18 02:28:05] -rw-r--r-- 1 boinc boinc     21521 May 18 02:28 stderr.txt
[2024-05-18 02:28:05] HITS file was successfully produced:
[2024-05-18 02:28:05] -rw------- 1 boinc boinc 231334662 May 18 02:26 shared/HITS.pool.root.1
[2024-05-18 02:28:05]  *** Contents of shared directory: ***
[2024-05-18 02:28:05] total 815192
[2024-05-18 02:28:05] -rw-r--r-- 2 boinc boinc 602114511 May 18 01:22 ATLAS.root_0
[2024-05-18 02:28:05] -rw-r--r-- 2 boinc boinc     17537 May 18 01:22 start_atlas.sh
[2024-05-18 02:28:05] -rw-r--r-- 2 boinc boinc    480002 May 18 01:22 input.tar.gz
[2024-05-18 02:28:05] -rw------- 1 boinc boinc 231334662 May 18 02:26 HITS.pool.root.1
[2024-05-18 02:28:05] -rw------- 1 boinc boinc    788480 May 18 02:28 result.tar.gz
02:28:06 (256556): run_atlas exited; CPU time 34383.301268
02:28:06 (256556): called boinc_finish(0)

</stderr_txt>
]]>

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