Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
06:05:16 (277518): wrapper (7.7.26015): starting
06:05:16 (277518): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 06:05:16] Arguments: --nthreads 12
[2024-05-18 06:05:16] Threads: 12
[2024-05-18 06:05:16] Checking for CVMFS
[2024-05-18 06:05:17] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 06:05:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 06:05:17] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 06:05:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 06:05:17] 2.10.1.0 2796 173697 180936 132879 2 275 31883861 45568001 11940 130560 0 1122137145 99.767 677291493 15184 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-05-18 06:05:17] CVMFS is ok
[2024-05-18 06:05:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 06:05:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 06:05:17] Further information can be found at the LHC@home message board.
[2024-05-18 06:05:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 06:05:17] Checking for apptainer binary...
[2024-05-18 06:05:17] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 06:05:17] Running /usr/bin/apptainer --version
[2024-05-18 06:05:17] apptainer version 1.1.8-1.el7
[2024-05-18 06:05:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 06:05:18] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0078.triumf.lcg
[2024-05-18 06:05:18] apptainer works
[2024-05-18 06:05:18] Set ATHENA_PROC_NUMBER=12
[2024-05-18 06:05:18] Set ATHENA_CORE_NUMBER=12
[2024-05-18 06:05:18] Starting ATLAS job with PandaID=6208378301
[2024-05-18 06:05:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 06:59:26]  *** The last 200 lines of the pilot log: ***
[2024-05-18 06:59:26]  guid=7b7c4035-016e-48aa-ad6e-8a3426ed03da
[2024-05-18 06:59:26]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-18 06:59:26]  is_tar=False
[2024-05-18 06:59:26]  lfn=log.38776104._014830.job.log.tgz.1
[2024-05-18 06:59:26]  mtime=0
[2024-05-18 06:59:26]  protocol_id=None
[2024-05-18 06:59:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-18 06:59:26]  replicas=None
[2024-05-18 06:59:26]  scope=mc23_13p6TeV
[2024-05-18 06:59:26]  status=None
[2024-05-18 06:59:26]  status_code=0
[2024-05-18 06:59:26]  storage_token=
[2024-05-18 06:59:26]  surl=/home/boinc/slots/0/PanDA_Pilot-6208378301/log.38776104._014830.job.log.tgz.1
[2024-05-18 06:59:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fd/2e/log.38776104._014830.job.log.tgz.1
[2024-05-18 06:59:26]  workdir=None
[2024-05-18 06:59:26] ]
[2024-05-18 06:59:26] 2024-05-18 13:58:54,999 | INFO     | transferring file log.38776104._014830.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6208378301/log.38776104._014830.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-18 06:59:26] 2024-05-18 13:58:54,999 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6208378301/log.38776104._014830.job.log.tgz.1 /home/boinc/slots/0/log.38776104._014830.job.log.t
[2024-05-18 06:59:26] 2024-05-18 13:58:55,028 | INFO     | adding to output.list: log.38776104._014830.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fd/2e/log.38776104._014830.job.log.tg
[2024-05-18 06:59:26] 2024-05-18 13:58:55,029 | INFO     | summary of transferred files:
[2024-05-18 06:59:26] 2024-05-18 13:58:55,029 | INFO     |  -- lfn=log.38776104._014830.job.log.tgz.1, status_code=0, status=transferred
[2024-05-18 06:59:26] 2024-05-18 13:58:55,029 | INFO     | stage-out finished correctly
[2024-05-18 06:59:26] 2024-05-18 13:58:55,575 | INFO     | monitor loop #253: job 0:6208378301 is in state 'finished'
[2024-05-18 06:59:26] 2024-05-18 13:58:55,575 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 06:59:26] 2024-05-18 13:58:57,467 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-18 06:59:26] 2024-05-18 13:58:58,079 | INFO     | monitor loop #254: job 0:6208378301 is in state 'finished'
[2024-05-18 06:59:26] 2024-05-18 13:58:58,079 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 06:59:26] 2024-05-18 13:58:59,959 | INFO     | job 6208378301 has state=finished
[2024-05-18 06:59:26] 2024-05-18 13:58:59,960 | INFO     | preparing for final server update for job 6208378301 in state='finished'
[2024-05-18 06:59:26] 2024-05-18 13:58:59,961 | INFO     | this job has now completed (state=finished)
[2024-05-18 06:59:26] 2024-05-18 13:58:59,961 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-18 06:59:26] 2024-05-18 13:58:59,961 | INFO     | job 6208378301 has finished - writing final server update
[2024-05-18 06:59:26] 2024-05-18 13:58:59,961 | INFO     | total number of processed events: 400 (read)
[2024-05-18 06:59:26] 2024-05-18 13:58:59,967 | INFO     | executing command: lscpu
[2024-05-18 06:59:26] 2024-05-18 13:59:00,020 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-18 06:59:26] 2024-05-18 13:59:00,021 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 06:59:26] 2024-05-18 13:59:00,079 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 06:59:26] 2024-05-18 13:59:00,582 | INFO     | monitor loop #255: job 0:6208378301 is in state 'finished'
[2024-05-18 06:59:26] 2024-05-18 13:59:00,583 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 06:59:26] 2024-05-18 13:59:03,086 | INFO     | monitor loop #256: job 0:6208378301 is in state 'finished'
[2024-05-18 06:59:26] 2024-05-18 13:59:03,086 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 06:59:26] 2024-05-18 13:59:03,891 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-18 06:59:26] 2024-05-18 13:59:03,892 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6208378301/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 06:59:26] 2024-05-18 13:59:03,893 | INFO     | extracted standard info from prmon json
[2024-05-18 06:59:26] 2024-05-18 13:59:03,893 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 06:59:26] 2024-05-18 13:59:03,894 | WARNING  | GPU info not found in prmon json
[2024-05-18 06:59:26] 2024-05-18 13:59:03,894 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 06:59:26] 2024-05-18 13:59:03,894 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 06:59:26] 2024-05-18 13:59:03,897 | INFO     | fitting pss+swap vs Time
[2024-05-18 06:59:26] 2024-05-18 13:59:03,897 | INFO     | model: linear, x: [1716037858.0, 1716037919.0, 1716037980.0, 1716038041.0, 1716038102.0, 1716038163.0, 1716038224.0, 1716038285.0, 1716038346.0, 1716038407.0, 1716
[2024-05-18 06:59:26] 2024-05-18 13:59:03,897 | INFO     | sum of square deviations: 30168007.5
[2024-05-18 06:59:26] 2024-05-18 13:59:03,898 | INFO     | sum of deviations: 14769433307.499998
[2024-05-18 06:59:26] 2024-05-18 13:59:03,898 | INFO     | mean x: 1716039230.5
[2024-05-18 06:59:26] 2024-05-18 13:59:03,898 | INFO     | mean y: 2515639.934782609
[2024-05-18 06:59:26] 2024-05-18 13:59:03,898 | INFO     | -- intersect: -840123467752.3514
[2024-05-18 06:59:26] 2024-05-18 13:59:03,898 | INFO     | intersect: -840123467752.3514
[2024-05-18 06:59:26] 2024-05-18 13:59:03,898 | INFO     | chi2: 1.4919458596970356
[2024-05-18 06:59:26] 2024-05-18 13:59:03,899 | INFO     | -- intersect: -840123467752.3514
[2024-05-18 06:59:26] 2024-05-18 13:59:03,899 | INFO     | current memory leak: 489.57 B/s (using 46 data points, chi2=1.49)
[2024-05-18 06:59:26] 2024-05-18 13:59:03,899 | INFO     | ..............................
[2024-05-18 06:59:26] 2024-05-18 13:59:03,899 | INFO     | . Timing measurements:
[2024-05-18 06:59:26] 2024-05-18 13:59:03,900 | INFO     | . get job = 0 s
[2024-05-18 06:59:26] 2024-05-18 13:59:03,900 | INFO     | . initial setup = 2 s
[2024-05-18 06:59:26] 2024-05-18 13:59:03,900 | INFO     | . payload setup = 5 s
[2024-05-18 06:59:26] 2024-05-18 13:59:03,900 | INFO     | . stage-in = 0 s
[2024-05-18 06:59:26] 2024-05-18 13:59:03,900 | INFO     | . payload execution = 3180 s
[2024-05-18 06:59:26] 2024-05-18 13:59:03,900 | INFO     | . stage-out = 0 s
[2024-05-18 06:59:26] 2024-05-18 13:59:03,900 | INFO     | . log creation = 0 s
[2024-05-18 06:59:26] 2024-05-18 13:59:03,900 | INFO     | ..............................
[2024-05-18 06:59:26] 2024-05-18 13:59:03,995 | INFO     | 
[2024-05-18 06:59:26] 2024-05-18 13:59:03,996 | INFO     | job summary report
[2024-05-18 06:59:26] 2024-05-18 13:59:03,996 | INFO     | --------------------------------------------------
[2024-05-18 06:59:26] 2024-05-18 13:59:03,996 | INFO     | PanDA job id: 6208378301
[2024-05-18 06:59:26] 2024-05-18 13:59:03,996 | INFO     | task id: 38776104
[2024-05-18 06:59:26] 2024-05-18 13:59:03,996 | INFO     | errors: (none)
[2024-05-18 06:59:26] 2024-05-18 13:59:03,996 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 06:59:26] 2024-05-18 13:59:03,996 | INFO     | pilot state: finished 
[2024-05-18 06:59:26] 2024-05-18 13:59:03,997 | INFO     | transexitcode: 0
[2024-05-18 06:59:26] 2024-05-18 13:59:03,997 | INFO     | exeerrorcode: 0
[2024-05-18 06:59:26] 2024-05-18 13:59:03,997 | INFO     | exeerrordiag: 
[2024-05-18 06:59:26] 2024-05-18 13:59:03,997 | INFO     | exitcode: 0
[2024-05-18 06:59:26] 2024-05-18 13:59:03,997 | INFO     | exitmsg: OK
[2024-05-18 06:59:26] 2024-05-18 13:59:03,997 | INFO     | cpuconsumptiontime: 26670 s
[2024-05-18 06:59:26] 2024-05-18 13:59:03,997 | INFO     | nevents: 400
[2024-05-18 06:59:26] 2024-05-18 13:59:03,997 | INFO     | neventsw: 0
[2024-05-18 06:59:26] 2024-05-18 13:59:03,998 | INFO     | pid: 10175
[2024-05-18 06:59:26] 2024-05-18 13:59:03,998 | INFO     | pgrp: 10175
[2024-05-18 06:59:26] 2024-05-18 13:59:03,998 | INFO     | corecount: 12
[2024-05-18 06:59:26] 2024-05-18 13:59:03,998 | INFO     | event service: False
[2024-05-18 06:59:26] 2024-05-18 13:59:03,998 | INFO     | sizes: {0: 2391298, 1: 2392233, 5: 2392439, 12: 2392495, 3189: 2418023, 3190: 2427160, 3193: 2427160, 3199: 2427330}
[2024-05-18 06:59:26] 2024-05-18 13:59:03,998 | INFO     | --------------------------------------------------
[2024-05-18 06:59:26] 2024-05-18 13:59:03,998 | INFO     | 
[2024-05-18 06:59:26] 2024-05-18 13:59:03,998 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 06:59:26] 2024-05-18 13:59:04,028 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 06:59:26] 2024-05-18 13:59:04,029 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 06:59:26] 2024-05-18 13:59:04,029 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 06:59:26] 2024-05-18 13:59:04,029 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 06:59:26] 2024-05-18 13:59:04,029 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 06:59:26] 2024-05-18 13:59:04,029 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 06:59:26] 2024-05-18 13:59:04,029 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 06:59:26] 2024-05-18 13:59:04,029 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 06:59:26] 2024-05-18 13:59:04,029 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 06:59:26] 2024-05-18 13:59:04,030 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 06:59:26] 2024-05-18 13:59:04,030 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 06:59:26] 2024-05-18 13:59:04,030 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 06:59:26] 2024-05-18 13:59:04,030 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 06:59:26] 2024-05-18 13:59:04,030 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 06:59:26] 2024-05-18 13:59:04,030 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 06:59:26] 2024-05-18 13:59:04,030 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 06:59:26] 2024-05-18 13:59:04,030 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 06:59:26] 2024-05-18 13:59:04,030 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 06:59:26] 2024-05-18 13:59:04,031 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 06:59:26] 2024-05-18 13:59:04,031 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 06:59:26] 2024-05-18 13:59:04,031 | INFO     | job 6208378301 has completed (purged errors)
[2024-05-18 06:59:26] 2024-05-18 13:59:04,031 | INFO     | overall cleanup function is called
[2024-05-18 06:59:26] 2024-05-18 13:59:05,040 | INFO     | --- collectZombieJob: --- 10, [10175]
[2024-05-18 06:59:26] 2024-05-18 13:59:05,040 | INFO     | zombie collector waiting for pid 10175
[2024-05-18 06:59:26] 2024-05-18 13:59:05,040 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 06:59:26] 2024-05-18 13:59:06,046 | INFO     | collected zombie processes
[2024-05-18 06:59:26] 2024-05-18 13:59:06,046 | INFO     | will now attempt to kill all subprocesses of pid=10175
[2024-05-18 06:59:26] 2024-05-18 13:59:06,192 | INFO     | process IDs to be killed: [10175] (in reverse order)
[2024-05-18 06:59:26] 2024-05-18 13:59:06,294 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 06:59:26] 2024-05-18 13:59:06,294 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 06:59:26] 2024-05-18 13:59:06,307 | INFO     | did not find any defunct processes belonging to 10175
[2024-05-18 06:59:26] 2024-05-18 13:59:06,319 | INFO     | did not find any defunct processes belonging to 10175
[2024-05-18 06:59:26] 2024-05-18 13:59:06,319 | INFO     | ready for new job
[2024-05-18 06:59:26] 2024-05-18 13:59:06,319 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 06:59:26] 2024-05-18 13:59:06,321 | INFO     | *************************************
[2024-05-18 06:59:26] 2024-05-18 13:59:06,322 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 06:59:26] 2024-05-18 13:59:06,322 | INFO     | *************************************
[2024-05-18 06:59:26] 2024-05-18 13:59:06,322 | INFO     | 
[2024-05-18 06:59:26] 2024-05-18 13:59:06,326 | INFO     | architecture information:
[2024-05-18 06:59:26] 2024-05-18 13:59:06,327 | INFO     | executing command: cat /etc/os-release
[2024-05-18 06:59:26] 2024-05-18 13:59:06,345 | INFO     | cat /etc/os-release:
[2024-05-18 06:59:26] NAME="CentOS Linux"
[2024-05-18 06:59:26] VERSION="7 (Core)"
[2024-05-18 06:59:26] ID="centos"
[2024-05-18 06:59:26] ID_LIKE="rhel fedora"
[2024-05-18 06:59:26] VERSION_ID="7"
[2024-05-18 06:59:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 06:59:26] ANSI_COLOR="0;31"
[2024-05-18 06:59:26] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 06:59:26] HOME_URL="https://www.centos.org/"
[2024-05-18 06:59:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 06:59:26] 
[2024-05-18 06:59:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 06:59:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 06:59:26] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 06:59:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 06:59:26] 
[2024-05-18 06:59:26] 2024-05-18 13:59:06,345 | INFO     | *************************************
[2024-05-18 06:59:26] 2024-05-18 13:59:06,849 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 06:59:26] 2024-05-18 13:59:06,875 | INFO     | sufficient remaining disk space (2087012270080 B)
[2024-05-18 06:59:26] 2024-05-18 13:59:06,877 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 06:59:26] 2024-05-18 13:59:06,877 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 06:59:26] 2024-05-18 13:59:06,878 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 06:59:26] 2024-05-18 13:59:06,878 | INFO     | aborting loop
[2024-05-18 06:59:26] 2024-05-18 13:59:07,613 | INFO     | all job control threads have been joined
[2024-05-18 06:59:26] 2024-05-18 13:59:07,769 | INFO     | all data control threads have been joined
[2024-05-18 06:59:26] 2024-05-18 13:59:07,801 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 06:59:26] 2024-05-18 13:59:07,801 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 06:59:26] 2024-05-18 13:59:07,801 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 06:59:26] 2024-05-18 13:59:07,825 | INFO     | all payload control threads have been joined
[2024-05-18 06:59:26] 2024-05-18 13:59:07,881 | INFO     | [job] job monitor thread has finished
[2024-05-18 06:59:26] 2024-05-18 13:59:07,883 | INFO     | [job] retrieve thread has finished
[2024-05-18 06:59:26] 2024-05-18 13:59:08,076 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 06:59:26] 2024-05-18 13:59:08,092 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 06:59:26] 2024-05-18 13:59:08,119 | INFO     | [payload] validate_post thread has finished
[2024-05-18 06:59:26] 2024-05-18 13:59:08,314 | INFO     | [data] copytool_in thread has finished
[2024-05-18 06:59:26] 2024-05-18 13:59:08,601 | INFO     | [payload] failed_post thread has finished
[2024-05-18 06:59:26] 2024-05-18 13:59:08,614 | INFO     | [job] control thread has finished
[2024-05-18 06:59:26] 2024-05-18 13:59:08,753 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 06:59:26] 2024-05-18 13:59:08,775 | INFO     | [data] control thread has finished
[2024-05-18 06:59:26] 2024-05-18 13:59:08,826 | INFO     | [payload] control thread has finished
[2024-05-18 06:59:26] 2024-05-18 13:59:08,850 | INFO     | [job] validate thread has finished
[2024-05-18 06:59:26] 2024-05-18 13:59:09,008 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 06:59:26] 2024-05-18 13:59:09,244 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 06:59:26] 2024-05-18 13:59:09,344 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 06:59:26] 2024-05-18 13:59:10,016 | INFO     | [job] queue monitor thread has finished
[2024-05-18 06:59:26] 2024-05-18 13:59:10,097 | INFO     | [data] copytool_out thread has finished
[2024-05-18 06:59:26] 2024-05-18 13:59:12,083 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 06:59:26] 2024-05-18 13:59:17,324 | INFO     | job.realtimelogging is not enabled
[2024-05-18 06:59:26] 2024-05-18 13:59:18,329 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 06:59:26] 2024-05-18 13:59:20,442 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140051087234880)>', '<ExcThread(monitor, started 140050671060736)>']
[2024-05-18 06:59:26] 2024-05-18 13:59:20,877 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 06:59:26] 2024-05-18 13:59:20,877 | INFO     | [monitor] control thread has ended
[2024-05-18 06:59:26] 2024-05-18 13:59:25,464 | INFO     | all workflow threads have been joined
[2024-05-18 06:59:26] 2024-05-18 13:59:25,464 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 06:59:26] 2024-05-18 13:59:25,464 | INFO     | traces error code: 0
[2024-05-18 06:59:26] 2024-05-18 13:59:25,464 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 06:59:26] 2024-05-18 13:59:25,553 [wrapper] ==== pilot stdout END ====
[2024-05-18 06:59:26] 2024-05-18 13:59:25,557 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 06:59:26] 2024-05-18 13:59:25,561 [wrapper] pilotpid: 3652
[2024-05-18 06:59:26] 2024-05-18 13:59:25,564 [wrapper] Pilot exit status: 0
[2024-05-18 06:59:26] 2024-05-18 13:59:25,574 [wrapper] pandaids: 6208378301
[2024-05-18 06:59:26] 2024-05-18 13:59:25,656 [wrapper] cleanup: SIGTERM to supervisor_pilot 259482 3653
[2024-05-18 06:59:26] 2024-05-18 13:59:25,659 [wrapper] Test setup, not cleaning
[2024-05-18 06:59:26] 2024-05-18 13:59:25,662 [wrapper] ==== wrapper stdout END ====
[2024-05-18 06:59:26] 2024-05-18 13:59:25,664 [wrapper] ==== wrapper stderr END ====
[2024-05-18 06:59:26] 2024-05-18 13:59:25,669 [wrapper] apfmon messages muted
[2024-05-18 06:59:26]  *** Error codes and diagnostics ***
[2024-05-18 06:59:26]     "exeErrorCode": 0,
[2024-05-18 06:59:26]     "exeErrorDiag": "",
[2024-05-18 06:59:26]     "pilotErrorCode": 0,
[2024-05-18 06:59:26]     "pilotErrorDiag": "",
[2024-05-18 06:59:26]  *** Listing of results directory ***
[2024-05-18 06:59:26] total 813980
[2024-05-18 06:59:26] -rw-r--r-- 1 boinc boinc    467845 May 17 17:56 pilot3.tar.gz
[2024-05-18 06:59:26] -rw-r--r-- 1 boinc boinc      5633 May 17 18:13 queuedata.json
[2024-05-18 06:59:26] -rwx------ 1 boinc boinc     32251 May 17 18:14 runpilot2-wrapper.sh
[2024-05-18 06:59:26] -rw-r--r-- 1 boinc boinc       100 May 18 06:05 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 06:59:26] -rwxr-xr-x 1 boinc boinc      7986 May 18 06:05 run_atlas
[2024-05-18 06:59:26] -rw-r--r-- 1 boinc boinc       105 May 18 06:05 job.xml
[2024-05-18 06:59:26] -rw-r--r-- 1 boinc boinc      6626 May 18 06:05 init_data.xml
[2024-05-18 06:59:26] -rw-r--r-- 2 boinc boinc 599033517 May 18 06:05 EVNT.38776100._000506.pool.root.1
[2024-05-18 06:59:26] drwxrwx--x 2 boinc boinc      4096 May 18 06:05 shared
[2024-05-18 06:59:26] -rw-r--r-- 2 boinc boinc    480008 May 18 06:05 input.tar.gz
[2024-05-18 06:59:26] -rw-r--r-- 2 boinc boinc     17537 May 18 06:05 start_atlas.sh
[2024-05-18 06:59:26] -rw-r--r-- 1 boinc boinc         0 May 18 06:05 boinc_lockfile
[2024-05-18 06:59:26] -rw-r--r-- 1 boinc boinc      2645 May 18 06:05 pandaJob.out
[2024-05-18 06:59:26] -rw------- 1 boinc boinc       424 May 18 06:05 setup.sh.local
[2024-05-18 06:59:26] -rw------- 1 boinc boinc   1019073 May 18 06:05 agis_schedconf.cvmfs.json
[2024-05-18 06:59:26] -rw------- 1 boinc boinc         0 May 18 06:05 agis_ddmendpoints.agis.ALL.json
[2024-05-18 06:59:26] -rw------- 1 boinc boinc   1324701 May 18 06:05 cric_ddmendpoints.json
[2024-05-18 06:59:26] drwx------ 4 boinc boinc      4096 May 18 06:05 pilot3
[2024-05-18 06:59:26] -rw------- 1 boinc boinc 229591276 May 18 06:58 HITS.38776104._014830.pool.root.1
[2024-05-18 06:59:26] -rw-r--r-- 1 boinc boinc       530 May 18 06:58 boinc_task_state.xml
[2024-05-18 06:59:26] -rw------- 1 boinc boinc        95 May 18 06:58 pilot_heartbeat.json
[2024-05-18 06:59:26] -rw------- 1 boinc boinc      1056 May 18 06:58 memory_monitor_summary.json
[2024-05-18 06:59:26] -rw------- 1 boinc boinc    344400 May 18 06:58 log.38776104._014830.job.log.tgz.1
[2024-05-18 06:59:26] -rw------- 1 boinc boinc      7771 May 18 06:59 heartbeat.json
[2024-05-18 06:59:26] -rw------- 1 boinc boinc      4282 May 18 06:59 pilotlog.txt
[2024-05-18 06:59:26] -rw-r--r-- 1 boinc boinc        27 May 18 06:59 wrapper_checkpoint.txt
[2024-05-18 06:59:26] -rw------- 1 boinc boinc    333551 May 18 06:59 log.38776104._014830.job.log.1
[2024-05-18 06:59:26] -rw------- 1 boinc boinc       357 May 18 06:59 output.list
[2024-05-18 06:59:26] -rw-r--r-- 1 boinc boinc       620 May 18 06:59 runtime_log
[2024-05-18 06:59:26] -rw------- 1 boinc boinc    696320 May 18 06:59 result.tar.gz
[2024-05-18 06:59:26] -rw------- 1 boinc boinc       651 May 18 06:59 TK2KDmdpNS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmQoRKDmEoJE4m.diag
[2024-05-18 06:59:26] -rw-r--r-- 1 boinc boinc     11286 May 18 06:59 runtime_log.err
[2024-05-18 06:59:26] -rw-r--r-- 1 boinc boinc      8192 May 18 06:59 boinc_mmap_file
[2024-05-18 06:59:26] -rw-r--r-- 1 boinc boinc     21794 May 18 06:59 stderr.txt
[2024-05-18 06:59:26] HITS file was successfully produced:
[2024-05-18 06:59:26] -rw------- 1 boinc boinc 229591276 May 18 06:58 shared/HITS.pool.root.1
[2024-05-18 06:59:26]  *** Contents of shared directory: ***
[2024-05-18 06:59:26] total 810388
[2024-05-18 06:59:26] -rw-r--r-- 2 boinc boinc 599033517 May 18 06:05 ATLAS.root_0
[2024-05-18 06:59:26] -rw-r--r-- 2 boinc boinc    480008 May 18 06:05 input.tar.gz
[2024-05-18 06:59:26] -rw-r--r-- 2 boinc boinc     17537 May 18 06:05 start_atlas.sh
[2024-05-18 06:59:26] -rw------- 1 boinc boinc 229591276 May 18 06:58 HITS.pool.root.1
[2024-05-18 06:59:26] -rw------- 1 boinc boinc    696320 May 18 06:59 result.tar.gz
06:59:27 (277518): run_atlas exited; CPU time 26565.032227
06:59:27 (277518): called boinc_finish(0)

</stderr_txt>
]]>

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