Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
00:32:22 (32504): wrapper (7.7.26015): starting
00:32:22 (32504): wrapper: running run_atlas (--nthreads 8)
[2024-05-18 00:32:22] Arguments: --nthreads 8
[2024-05-18 00:32:22] Threads: 8
[2024-05-18 00:32:22] Checking for CVMFS
[2024-05-18 00:32:22] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 00:32:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 00:32:23] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 00:32:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 00:32:23] 2.10.1.0 29313 184623 242596 132871 1 90 39292398 45568001 13309 130560 0 951459173 99.711 740327661 4188 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-05-18 00:32:23] CVMFS is ok
[2024-05-18 00:32:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 00:32:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 00:32:23] Further information can be found at the LHC@home message board.
[2024-05-18 00:32:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 00:32:23] Checking for apptainer binary...
[2024-05-18 00:32:23] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 00:32:23] Running /usr/bin/apptainer --version
[2024-05-18 00:32:23] apptainer version 1.1.8-1.el7
[2024-05-18 00:32:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 00:32:24] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0021.triumf.lcg
[2024-05-18 00:32:24] apptainer works
[2024-05-18 00:32:24] Set ATHENA_PROC_NUMBER=8
[2024-05-18 00:32:24] Set ATHENA_CORE_NUMBER=8
[2024-05-18 00:32:24] Starting ATLAS job with PandaID=6208378115
[2024-05-18 00:32:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 02:21:54]  *** The last 200 lines of the pilot log: ***
[2024-05-18 02:21:54] 2024-05-18 09:21:40,837 | INFO     | model: linear, x: [1716017576.0, 1716017637.0, 1716017698.0, 1716017759.0, 1716017820.0, 1716017881.0, 1716017942.0, 1716018003.0, 1716018064.0, 1716018125.0, 1716
[2024-05-18 02:21:54] 2024-05-18 09:21:40,837 | INFO     | sum of square deviations: 329034641.49019575
[2024-05-18 02:21:54] 2024-05-18 09:21:40,837 | INFO     | sum of deviations: 43863608115.39216
[2024-05-18 02:21:54] 2024-05-18 09:21:40,837 | INFO     | mean x: 1716020656.509804
[2024-05-18 02:21:54] 2024-05-18 09:21:40,837 | INFO     | mean y: 2435647.6078431373
[2024-05-18 02:21:54] 2024-05-18 09:21:40,837 | INFO     | -- intersect: -228760278375.9454
[2024-05-18 02:21:54] 2024-05-18 09:21:40,837 | INFO     | intersect: -228760278375.9454
[2024-05-18 02:21:54] 2024-05-18 09:21:40,837 | INFO     | chi2: 4.882390547008118
[2024-05-18 02:21:54] 2024-05-18 09:21:40,838 | INFO     | current chi2=4.882390547008118 (change=0.33795917028696953 %)
[2024-05-18 02:21:54] 2024-05-18 09:21:40,838 | INFO     | right removable region: 101
[2024-05-18 02:21:54] 2024-05-18 09:21:40,838 | INFO     | model: linear, x: [1716017881.0, 1716017942.0, 1716018003.0, 1716018064.0, 1716018125.0, 1716018186.0, 1716018247.0, 1716018308.0, 1716018369.0, 1716018430.0, 1716
[2024-05-18 02:21:54] 2024-05-18 09:21:40,838 | INFO     | sum of square deviations: 329034031.49019575
[2024-05-18 02:21:54] 2024-05-18 09:21:40,838 | INFO     | sum of deviations: 19463555733.019608
[2024-05-18 02:21:54] 2024-05-18 09:21:40,839 | INFO     | mean x: 1716020961.509804
[2024-05-18 02:21:54] 2024-05-18 09:21:40,839 | INFO     | mean y: 2520969.9803921566
[2024-05-18 02:21:54] 2024-05-18 09:21:40,839 | INFO     | -- intersect: -101506339594.10136
[2024-05-18 02:21:54] 2024-05-18 09:21:40,839 | INFO     | intersect: -101506339594.10136
[2024-05-18 02:21:54] 2024-05-18 09:21:40,839 | INFO     | chi2: 2.2395284947687615
[2024-05-18 02:21:54] 2024-05-18 09:21:40,839 | INFO     | current chi2=2.2395284947687615 (change=54.285512775760544 %)
[2024-05-18 02:21:54] 2024-05-18 09:21:40,839 | INFO     | model: linear, x: [1716018186.0, 1716018247.0, 1716018308.0, 1716018369.0, 1716018430.0, 1716018491.0, 1716018552.0, 1716018613.0, 1716018674.0, 1716018735.0, 1716
[2024-05-18 02:21:54] 2024-05-18 09:21:40,839 | INFO     | sum of square deviations: 282977048.9896903
[2024-05-18 02:21:54] 2024-05-18 09:21:40,840 | INFO     | sum of deviations: -170732609.6907205
[2024-05-18 02:21:54] 2024-05-18 09:21:40,840 | INFO     | mean x: 1716021114.0103092
[2024-05-18 02:21:54] 2024-05-18 09:21:40,840 | INFO     | mean y: 2586019.6907216497
[2024-05-18 02:21:54] 2024-05-18 09:21:40,840 | INFO     | -- intersect: 1037937699.7134774
[2024-05-18 02:21:54] 2024-05-18 09:21:40,840 | INFO     | intersect: 1037937699.7134774
[2024-05-18 02:21:54] 2024-05-18 09:21:40,840 | INFO     | chi2: 0.8107356230345567
[2024-05-18 02:21:54] 2024-05-18 09:21:40,840 | INFO     | current chi2=0.8107356230345567 (change=63.79882529164838 %)
[2024-05-18 02:21:54] 2024-05-18 09:21:40,840 | INFO     | model: linear, x: [1716018491.0, 1716018552.0, 1716018613.0, 1716018674.0, 1716018735.0, 1716018796.0, 1716018857.0, 1716018918.0, 1716018979.0, 1716019040.0, 1716
[2024-05-18 02:21:54] 2024-05-18 09:21:40,841 | INFO     | sum of square deviations: 241431778.9891305
[2024-05-18 02:21:54] 2024-05-18 09:21:40,841 | INFO     | sum of deviations: -11460295808.315214
[2024-05-18 02:21:54] 2024-05-18 09:21:40,841 | INFO     | mean x: 1716021266.5108695
[2024-05-18 02:21:54] 2024-05-18 09:21:40,841 | INFO     | mean y: 2626769.815217391
[2024-05-18 02:21:54] 2024-05-18 09:21:40,841 | INFO     | -- intersect: 81458810416.87218
[2024-05-18 02:21:54] 2024-05-18 09:21:40,841 | INFO     | intersect: 81458810416.87218
[2024-05-18 02:21:54] 2024-05-18 09:21:40,842 | INFO     | chi2: 0.10917522102514383
[2024-05-18 02:21:54] 2024-05-18 09:21:40,842 | INFO     | current chi2=0.10917522102514383 (change=86.53380733209865 %)
[2024-05-18 02:21:54] 2024-05-18 09:21:40,842 | INFO     | model: linear, x: [1716018796.0, 1716018857.0, 1716018918.0, 1716018979.0, 1716019040.0, 1716019101.0, 1716019162.0, 1716019223.0, 1716019284.0, 1716019345.0, 1716
[2024-05-18 02:21:54] 2024-05-18 09:21:40,842 | INFO     | sum of square deviations: 204165658.9885056
[2024-05-18 02:21:54] 2024-05-18 09:21:40,842 | INFO     | sum of deviations: -10723098214.988504
[2024-05-18 02:21:54] 2024-05-18 09:21:40,842 | INFO     | mean x: 1716021419.0114942
[2024-05-18 02:21:54] 2024-05-18 09:21:40,842 | INFO     | mean y: 2623539.988505747
[2024-05-18 02:21:54] 2024-05-18 09:21:40,842 | INFO     | -- intersect: 90130739630.85452
[2024-05-18 02:21:54] 2024-05-18 09:21:40,843 | INFO     | intersect: 90130739630.85452
[2024-05-18 02:21:54] 2024-05-18 09:21:40,843 | INFO     | chi2: 0.09278781035007022
[2024-05-18 02:21:54] 2024-05-18 09:21:40,843 | INFO     | current chi2=0.09278781035007022 (change=15.010192350606255 %)
[2024-05-18 02:21:54] 2024-05-18 09:21:40,843 | INFO     | left removable region: 40
[2024-05-18 02:21:54] 2024-05-18 09:21:40,843 | INFO     | model: linear, x: [1716020016.0, 1716020077.0, 1716020138.0, 1716020199.0, 1716020260.0, 1716020321.0, 1716020382.0, 1716020443.0, 1716020504.0, 1716020565.0, 1716
[2024-05-18 02:21:54] 2024-05-18 09:21:40,843 | INFO     | sum of square deviations: 70365086.98360646
[2024-05-18 02:21:54] 2024-05-18 09:21:40,843 | INFO     | sum of deviations: 549686495.8688525
[2024-05-18 02:21:54] 2024-05-18 09:21:40,843 | INFO     | mean x: 1716021846.0163934
[2024-05-18 02:21:54] 2024-05-18 09:21:40,843 | INFO     | mean y: 2558004.131147541
[2024-05-18 02:21:54] 2024-05-18 09:21:40,843 | INFO     | -- intersect: -13402868974.036495
[2024-05-18 02:21:54] 2024-05-18 09:21:40,844 | INFO     | intersect: -13402868974.036495
[2024-05-18 02:21:54] 2024-05-18 09:21:40,844 | INFO     | chi2: 7.459417171201989e-05
[2024-05-18 02:21:54] 2024-05-18 09:21:40,844 | INFO     | -- intersect: -13402868974.036495
[2024-05-18 02:21:54] 2024-05-18 09:21:40,844 | INFO     | current memory leak: 7.81 B/s (using 61 data points, chi2=0.00)
[2024-05-18 02:21:54] 2024-05-18 09:21:40,844 | INFO     | ..............................
[2024-05-18 02:21:54] 2024-05-18 09:21:40,844 | INFO     | . Timing measurements:
[2024-05-18 02:21:54] 2024-05-18 09:21:40,845 | INFO     | . get job = 0 s
[2024-05-18 02:21:54] 2024-05-18 09:21:40,845 | INFO     | . initial setup = 2 s
[2024-05-18 02:21:54] 2024-05-18 09:21:40,845 | INFO     | . payload setup = 4 s
[2024-05-18 02:21:54] 2024-05-18 09:21:40,845 | INFO     | . stage-in = 0 s
[2024-05-18 02:21:54] 2024-05-18 09:21:40,845 | INFO     | . payload execution = 6517 s
[2024-05-18 02:21:54] 2024-05-18 09:21:40,845 | INFO     | . stage-out = 0 s
[2024-05-18 02:21:54] 2024-05-18 09:21:40,845 | INFO     | . log creation = 0 s
[2024-05-18 02:21:54] 2024-05-18 09:21:40,845 | INFO     | ..............................
[2024-05-18 02:21:54] 2024-05-18 09:21:40,916 | INFO     | 
[2024-05-18 02:21:54] 2024-05-18 09:21:40,917 | INFO     | job summary report
[2024-05-18 02:21:54] 2024-05-18 09:21:40,917 | INFO     | --------------------------------------------------
[2024-05-18 02:21:54] 2024-05-18 09:21:40,917 | INFO     | PanDA job id: 6208378115
[2024-05-18 02:21:54] 2024-05-18 09:21:40,917 | INFO     | task id: 38776104
[2024-05-18 02:21:54] 2024-05-18 09:21:40,917 | INFO     | errors: (none)
[2024-05-18 02:21:54] 2024-05-18 09:21:40,917 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 02:21:54] 2024-05-18 09:21:40,917 | INFO     | pilot state: finished 
[2024-05-18 02:21:54] 2024-05-18 09:21:40,918 | INFO     | transexitcode: 0
[2024-05-18 02:21:54] 2024-05-18 09:21:40,918 | INFO     | exeerrorcode: 0
[2024-05-18 02:21:54] 2024-05-18 09:21:40,918 | INFO     | exeerrordiag: 
[2024-05-18 02:21:54] 2024-05-18 09:21:40,918 | INFO     | exitcode: 0
[2024-05-18 02:21:54] 2024-05-18 09:21:40,918 | INFO     | exitmsg: OK
[2024-05-18 02:21:54] 2024-05-18 09:21:40,918 | INFO     | cpuconsumptiontime: 38559 s
[2024-05-18 02:21:54] 2024-05-18 09:21:40,918 | INFO     | nevents: 400
[2024-05-18 02:21:54] 2024-05-18 09:21:40,919 | INFO     | neventsw: 0
[2024-05-18 02:21:54] 2024-05-18 09:21:40,919 | INFO     | pid: 13648
[2024-05-18 02:21:54] 2024-05-18 09:21:40,919 | INFO     | pgrp: 13648
[2024-05-18 02:21:54] 2024-05-18 09:21:40,919 | INFO     | corecount: 8
[2024-05-18 02:21:54] 2024-05-18 09:21:40,919 | INFO     | event service: False
[2024-05-18 02:21:54] 2024-05-18 09:21:40,919 | INFO     | sizes: {0: 2392205, 4: 2392411, 11: 2392439, 6526: 2419458, 6528: 2428412, 6530: 2428468, 6534: 2428766}
[2024-05-18 02:21:54] 2024-05-18 09:21:40,919 | INFO     | --------------------------------------------------
[2024-05-18 02:21:54] 2024-05-18 09:21:40,919 | INFO     | 
[2024-05-18 02:21:54] 2024-05-18 09:21:40,919 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 02:21:54] 2024-05-18 09:21:40,940 | WARNING  | process 13648 is no longer using CPU - aborting
[2024-05-18 02:21:54] 2024-05-18 09:21:40,940 | INFO     | aborting job monitoring since job object (job id=6208378115) has expired
[2024-05-18 02:21:54] 2024-05-18 09:21:40,957 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 02:21:54] 2024-05-18 09:21:40,958 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 02:21:54] 2024-05-18 09:21:40,958 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 02:21:54] 2024-05-18 09:21:40,958 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 02:21:54] 2024-05-18 09:21:40,958 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 02:21:54] 2024-05-18 09:21:40,958 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 02:21:54] 2024-05-18 09:21:40,958 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 02:21:54] 2024-05-18 09:21:40,958 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 02:21:54] 2024-05-18 09:21:40,958 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 02:21:54] 2024-05-18 09:21:40,958 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 02:21:54] 2024-05-18 09:21:40,959 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 02:21:54] 2024-05-18 09:21:40,959 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 02:21:54] 2024-05-18 09:21:40,959 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 02:21:54] 2024-05-18 09:21:40,959 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 02:21:54] 2024-05-18 09:21:40,959 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 02:21:54] 2024-05-18 09:21:40,959 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 02:21:54] 2024-05-18 09:21:40,959 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 02:21:54] 2024-05-18 09:21:40,959 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 02:21:54] 2024-05-18 09:21:40,959 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 02:21:54] 2024-05-18 09:21:40,959 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 02:21:54] 2024-05-18 09:21:40,960 | INFO     | job 6208378115 has completed (purged errors)
[2024-05-18 02:21:54] 2024-05-18 09:21:40,960 | INFO     | overall cleanup function is called
[2024-05-18 02:21:54] 2024-05-18 09:21:41,968 | INFO     | --- collectZombieJob: --- 10, [13648]
[2024-05-18 02:21:54] 2024-05-18 09:21:41,968 | INFO     | zombie collector waiting for pid 13648
[2024-05-18 02:21:54] 2024-05-18 09:21:41,968 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 02:21:54] 2024-05-18 09:21:42,973 | INFO     | collected zombie processes
[2024-05-18 02:21:54] 2024-05-18 09:21:42,974 | INFO     | will now attempt to kill all subprocesses of pid=13648
[2024-05-18 02:21:54] 2024-05-18 09:21:43,103 | INFO     | process IDs to be killed: [13648] (in reverse order)
[2024-05-18 02:21:54] 2024-05-18 09:21:43,196 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 02:21:54] 2024-05-18 09:21:43,196 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 02:21:54] 2024-05-18 09:21:43,202 | INFO     | did not find any defunct processes belonging to 13648
[2024-05-18 02:21:54] 2024-05-18 09:21:43,207 | INFO     | did not find any defunct processes belonging to 13648
[2024-05-18 02:21:54] 2024-05-18 09:21:43,207 | INFO     | ready for new job
[2024-05-18 02:21:54] 2024-05-18 09:21:43,207 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 02:21:54] 2024-05-18 09:21:43,208 | INFO     | *************************************
[2024-05-18 02:21:54] 2024-05-18 09:21:43,209 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 02:21:54] 2024-05-18 09:21:43,209 | INFO     | *************************************
[2024-05-18 02:21:54] 2024-05-18 09:21:43,209 | INFO     | 
[2024-05-18 02:21:54] 2024-05-18 09:21:43,210 | INFO     | architecture information:
[2024-05-18 02:21:54] 2024-05-18 09:21:43,210 | INFO     | executing command: cat /etc/os-release
[2024-05-18 02:21:54] 2024-05-18 09:21:43,223 | INFO     | cat /etc/os-release:
[2024-05-18 02:21:54] NAME="CentOS Linux"
[2024-05-18 02:21:54] VERSION="7 (Core)"
[2024-05-18 02:21:54] ID="centos"
[2024-05-18 02:21:54] ID_LIKE="rhel fedora"
[2024-05-18 02:21:54] VERSION_ID="7"
[2024-05-18 02:21:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 02:21:54] ANSI_COLOR="0;31"
[2024-05-18 02:21:54] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 02:21:54] HOME_URL="https://www.centos.org/"
[2024-05-18 02:21:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 02:21:54] 
[2024-05-18 02:21:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 02:21:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 02:21:54] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 02:21:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 02:21:54] 
[2024-05-18 02:21:54] 2024-05-18 09:21:43,223 | INFO     | *************************************
[2024-05-18 02:21:54] 2024-05-18 09:21:43,725 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 02:21:54] 2024-05-18 09:21:43,744 | INFO     | sufficient remaining disk space (1254287736832 B)
[2024-05-18 02:21:54] 2024-05-18 09:21:43,744 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 02:21:54] 2024-05-18 09:21:43,744 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 02:21:54] 2024-05-18 09:21:43,745 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-18 02:21:54] 2024-05-18 09:21:43,745 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 02:21:54] 2024-05-18 09:21:43,745 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 02:21:54] 2024-05-18 09:21:43,746 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 02:21:54] 2024-05-18 09:21:43,746 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 02:21:54] 2024-05-18 09:21:43,746 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 02:21:54] 2024-05-18 09:21:44,366 | INFO     | all job control threads have been joined
[2024-05-18 02:21:54] 2024-05-18 09:21:44,448 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 02:21:54] 2024-05-18 09:21:44,449 | INFO     | aborting loop
[2024-05-18 02:21:54] 2024-05-18 09:21:44,561 | INFO     | all data control threads have been joined
[2024-05-18 02:21:54] 2024-05-18 09:21:44,746 | INFO     | [job] retrieve thread has finished
[2024-05-18 02:21:54] 2024-05-18 09:21:44,931 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 02:21:54] 2024-05-18 09:21:45,135 | INFO     | all payload control threads have been joined
[2024-05-18 02:21:54] 2024-05-18 09:21:45,153 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 02:21:54] 2024-05-18 09:21:45,353 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 02:21:54] 2024-05-18 09:21:45,372 | INFO     | [job] control thread has finished
[2024-05-18 02:21:54] 2024-05-18 09:21:45,454 | INFO     | [job] job monitor thread has finished
[2024-05-18 02:21:54] 2024-05-18 09:21:45,544 | INFO     | [job] validate thread has finished
[2024-05-18 02:21:54] 2024-05-18 09:21:45,559 | INFO     | [payload] validate_post thread has finished
[2024-05-18 02:21:54] 2024-05-18 09:21:45,566 | INFO     | [data] control thread has finished
[2024-05-18 02:21:54] 2024-05-18 09:21:45,638 | INFO     | [payload] failed_post thread has finished
[2024-05-18 02:21:54] 2024-05-18 09:21:45,747 | INFO     | [data] copytool_out thread has finished
[2024-05-18 02:21:54] 2024-05-18 09:21:45,846 | INFO     | [data] copytool_in thread has finished
[2024-05-18 02:21:54] 2024-05-18 09:21:45,927 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 02:21:54] 2024-05-18 09:21:45,955 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 02:21:54] 2024-05-18 09:21:46,141 | INFO     | [payload] control thread has finished
[2024-05-18 02:21:54] 2024-05-18 09:21:46,933 | INFO     | [job] queue monitor thread has finished
[2024-05-18 02:21:54] 2024-05-18 09:21:47,753 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 02:21:54] 2024-05-18 09:21:49,088 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140645593605952)>', '<ExcThread(monitor, started 140644945229568)>']
[2024-05-18 02:21:54] 2024-05-18 09:21:49,777 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 02:21:54] 2024-05-18 09:21:49,777 | INFO     | [monitor] control thread has ended
[2024-05-18 02:21:54] 2024-05-18 09:21:54,114 | INFO     | all workflow threads have been joined
[2024-05-18 02:21:54] 2024-05-18 09:21:54,115 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 02:21:54] 2024-05-18 09:21:54,115 | INFO     | traces error code: 0
[2024-05-18 02:21:54] 2024-05-18 09:21:54,115 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 02:21:54] 2024-05-18 09:21:54,202 [wrapper] ==== pilot stdout END ====
[2024-05-18 02:21:54] 2024-05-18 09:21:54,204 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 02:21:54] 2024-05-18 09:21:54,207 [wrapper] pilotpid: 4515
[2024-05-18 02:21:54] 2024-05-18 09:21:54,209 [wrapper] Pilot exit status: 0
[2024-05-18 02:21:54] 2024-05-18 09:21:54,219 [wrapper] pandaids: 6208378115
[2024-05-18 02:21:54] 2024-05-18 09:21:54,273 [wrapper] cleanup: SIGTERM to supervisor_pilot 16556 4516
[2024-05-18 02:21:54] 2024-05-18 09:21:54,275 [wrapper] Test setup, not cleaning
[2024-05-18 02:21:54] 2024-05-18 09:21:54,277 [wrapper] ==== wrapper stdout END ====
[2024-05-18 02:21:54] 2024-05-18 09:21:54,279 [wrapper] ==== wrapper stderr END ====
[2024-05-18 02:21:54] 2024-05-18 09:21:54,283 [wrapper] apfmon messages muted
[2024-05-18 02:21:54]  *** Error codes and diagnostics ***
[2024-05-18 02:21:54]     "exeErrorCode": 0,
[2024-05-18 02:21:54]     "exeErrorDiag": "",
[2024-05-18 02:21:54]     "pilotErrorCode": 0,
[2024-05-18 02:21:54]     "pilotErrorDiag": "",
[2024-05-18 02:21:54]  *** Listing of results directory ***
[2024-05-18 02:21:54] total 823480
[2024-05-18 02:21:54] -rw-r--r-- 1 boinc boinc      5633 May 17 17:56 queuedata.json
[2024-05-18 02:21:54] -rw-r--r-- 1 boinc boinc    467845 May 17 17:56 pilot3.tar.gz
[2024-05-18 02:21:54] -rwx------ 1 boinc boinc     32251 May 17 17:57 runpilot2-wrapper.sh
[2024-05-18 02:21:54] -rw-r--r-- 1 boinc boinc       100 May 18 00:32 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 02:21:54] -rwxr-xr-x 1 boinc boinc      7986 May 18 00:32 run_atlas
[2024-05-18 02:21:54] -rw-r--r-- 1 boinc boinc       105 May 18 00:32 job.xml
[2024-05-18 02:21:54] -rw-r--r-- 1 boinc boinc      6483 May 18 00:32 init_data.xml
[2024-05-18 02:21:54] -rw-r--r-- 2 boinc boinc 601356654 May 18 00:32 EVNT.38776100._000501.pool.root.1
[2024-05-18 02:21:54] -rw-r--r-- 2 boinc boinc     17537 May 18 00:32 start_atlas.sh
[2024-05-18 02:21:54] drwxrwx--x 2 boinc boinc      4096 May 18 00:32 shared
[2024-05-18 02:21:54] -rw-r--r-- 2 boinc boinc    480004 May 18 00:32 input.tar.gz
[2024-05-18 02:21:54] -rw-r--r-- 1 boinc boinc         0 May 18 00:32 boinc_lockfile
[2024-05-18 02:21:54] -rw-r--r-- 1 boinc boinc      2645 May 18 00:32 pandaJob.out
[2024-05-18 02:21:54] -rw------- 1 boinc boinc       424 May 18 00:32 setup.sh.local
[2024-05-18 02:21:54] -rw------- 1 boinc boinc   1019073 May 18 00:32 agis_schedconf.cvmfs.json
[2024-05-18 02:21:54] -rw------- 1 boinc boinc         0 May 18 00:32 agis_ddmendpoints.agis.ALL.json
[2024-05-18 02:21:54] -rw------- 1 boinc boinc   1324701 May 18 00:32 cric_ddmendpoints.json
[2024-05-18 02:21:54] drwx------ 4 boinc boinc      4096 May 18 00:32 pilot3
[2024-05-18 02:21:54] -rw-r--r-- 1 boinc boinc       531 May 18 02:20 boinc_task_state.xml
[2024-05-18 02:21:54] -rw------- 1 boinc boinc 236482284 May 18 02:20 HITS.38776104._014705.pool.root.1
[2024-05-18 02:21:54] -rw------- 1 boinc boinc        95 May 18 02:21 pilot_heartbeat.json
[2024-05-18 02:21:54] -rw------- 1 boinc boinc      1060 May 18 02:21 memory_monitor_summary.json
[2024-05-18 02:21:54] -rw------- 1 boinc boinc    316494 May 18 02:21 log.38776104._014705.job.log.tgz.1
[2024-05-18 02:21:54] -rw------- 1 boinc boinc      7775 May 18 02:21 heartbeat.json
[2024-05-18 02:21:54] -rw-r--r-- 1 boinc boinc      8192 May 18 02:21 boinc_mmap_file
[2024-05-18 02:21:54] -rw-r--r-- 1 boinc boinc        27 May 18 02:21 wrapper_checkpoint.txt
[2024-05-18 02:21:54] -rw------- 1 boinc boinc      4333 May 18 02:21 pilotlog.txt
[2024-05-18 02:21:54] -rw------- 1 boinc boinc    619731 May 18 02:21 log.38776104._014705.job.log.1
[2024-05-18 02:21:54] -rw------- 1 boinc boinc       357 May 18 02:21 output.list
[2024-05-18 02:21:54] -rw-r--r-- 1 boinc boinc       620 May 18 02:21 runtime_log
[2024-05-18 02:21:54] -rw------- 1 boinc boinc    952320 May 18 02:21 result.tar.gz
[2024-05-18 02:21:54] -rw------- 1 boinc boinc       653 May 18 02:21 uonMDmrYNS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmInRKDmsYhC2m.diag
[2024-05-18 02:21:54] -rw-r--r-- 1 boinc boinc     11284 May 18 02:21 runtime_log.err
[2024-05-18 02:21:54] -rw-r--r-- 1 boinc boinc     21987 May 18 02:21 stderr.txt
[2024-05-18 02:21:55] HITS file was successfully produced:
[2024-05-18 02:21:55] -rw------- 1 boinc boinc 236482284 May 18 02:20 shared/HITS.pool.root.1
[2024-05-18 02:21:55]  *** Contents of shared directory: ***
[2024-05-18 02:21:55] total 819636
[2024-05-18 02:21:55] -rw-r--r-- 2 boinc boinc 601356654 May 18 00:32 ATLAS.root_0
[2024-05-18 02:21:55] -rw-r--r-- 2 boinc boinc     17537 May 18 00:32 start_atlas.sh
[2024-05-18 02:21:55] -rw-r--r-- 2 boinc boinc    480004 May 18 00:32 input.tar.gz
[2024-05-18 02:21:55] -rw------- 1 boinc boinc 236482284 May 18 02:20 HITS.pool.root.1
[2024-05-18 02:21:55] -rw------- 1 boinc boinc    952320 May 18 02:21 result.tar.gz
02:21:56 (32504): run_atlas exited; CPU time 37878.517289
02:21:56 (32504): called boinc_finish(0)

</stderr_txt>
]]>

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