Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2024-05-18 21:10:58 (16360): Detected: vboxwrapper 26206
2024-05-18 21:10:58 (16360): Detected: BOINC client v7.24.1
2024-05-18 21:10:59 (16360): Detected: VirtualBox VboxManage Interface (Version: 7.0.14)
2024-05-18 21:10:59 (16360): Successfully copied 'init_data.xml' to the shared directory.
2024-05-18 21:11:00 (16360): Create VM. (boinc_8d10ec03acd2d449, slot#0)
2024-05-18 21:11:01 (16360): Setting Memory Size for VM. (4600MB)
2024-05-18 21:11:01 (16360): Setting CPU Count for VM. (6)
2024-05-18 21:11:02 (16360): Setting Chipset Options for VM.
2024-05-18 21:11:02 (16360): Setting Graphics Controller Options for VM.
2024-05-18 21:11:02 (16360): Setting Boot Options for VM.
2024-05-18 21:11:03 (16360): Setting Network Configuration for NAT.
2024-05-18 21:11:03 (16360): Enabling VM Network Access.
2024-05-18 21:11:03 (16360): Disabling USB Support for VM.
2024-05-18 21:11:04 (16360): Disabling COM Port Support for VM.
2024-05-18 21:11:04 (16360): Disabling LPT Port Support for VM.
2024-05-18 21:11:05 (16360): Disabling Audio Support for VM.
2024-05-18 21:11:05 (16360): Disabling Clipboard Support for VM.
2024-05-18 21:11:05 (16360): Disabling Drag and Drop Support for VM.
2024-05-18 21:11:06 (16360): Adding storage controller(s) to VM.
2024-05-18 21:11:06 (16360): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-05-18 21:11:09 (16360): Adding VirtualBox Guest Additions to VM.
2024-05-18 21:11:09 (16360): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-05-18 21:11:10 (16360): forwarding host port 49221 to guest port 80
2024-05-18 21:11:10 (16360): Enabling remote desktop for VM.
2024-05-18 21:11:11 (16360): Enabling shared directory for VM.
2024-05-18 21:11:11 (16360): Starting VM using VBoxManage interface. (boinc_8d10ec03acd2d449, slot#0)
2024-05-18 21:11:17 (16360): Successfully started VM. (PID = '1404')
2024-05-18 21:11:17 (16360): Reporting VM Process ID to BOINC.
2024-05-18 21:11:17 (16360): Guest Log: BIOS: VirtualBox 7.0.14
2024-05-18 21:11:17 (16360): Guest Log: CPUID EDX: 0x178bfbff
2024-05-18 21:11:17 (16360): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-05-18 21:11:17 (16360): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-05-18 21:11:17 (16360): VM state change detected. (old = 'poweredoff', new = 'running')
2024-05-18 21:11:17 (16360): Detected: Web Application Enabled (http://localhost:49221)
2024-05-18 21:11:17 (16360): Detected: Remote Desktop Enabled (localhost:49222)
2024-05-18 21:11:17 (16360): Preference change detected
2024-05-18 21:11:17 (16360): Setting CPU throttle for VM. (40%)
2024-05-18 21:11:18 (16360): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-05-18 21:11:19 (16360): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-05-18 21:11:19 (16360): Guest Log: BIOS: Booting from Hard Disk...
2024-05-18 21:11:23 (16360): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-05-18 21:11:23 (16360): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-05-18 21:11:23 (16360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-05-18 21:11:23 (16360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-05-18 21:11:23 (16360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-05-18 21:11:23 (16360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-05-18 21:11:23 (16360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-05-18 21:11:23 (16360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-05-18 21:11:23 (16360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-05-18 21:11:23 (16360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-05-18 21:11:23 (16360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-05-18 21:11:23 (16360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-05-18 21:11:23 (16360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-05-18 21:11:23 (16360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-05-18 21:11:23 (16360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-05-18 21:11:23 (16360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-05-18 21:11:23 (16360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-05-18 21:11:23 (16360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-05-18 21:11:23 (16360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-05-18 21:11:23 (16360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-05-18 21:11:23 (16360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-05-18 21:11:23 (16360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-05-18 21:11:23 (16360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-05-18 21:11:23 (16360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-05-18 21:11:23 (16360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-05-18 21:11:23 (16360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-05-18 21:11:23 (16360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-05-18 21:11:23 (16360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-05-18 21:11:23 (16360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-05-18 21:11:23 (16360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-05-18 21:11:23 (16360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-05-18 21:11:23 (16360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-05-18 21:11:34 (16360): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-05-18 21:11:34 (16360): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-05-18 21:11:43 (16360): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-05-18 21:11:43 (16360): Guest Log: 00:00:00.000080 main     Log opened 2024-05-18T21:11:41.066179000Z
2024-05-18 21:11:43 (16360): Guest Log: 00:00:00.000144 main     OS Product: Linux
2024-05-18 21:11:43 (16360): Guest Log: 00:00:00.000174 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-05-18 21:11:43 (16360): Guest Log: 00:00:00.000190 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-05-18 21:11:43 (16360): Guest Log: 00:00:00.000204 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-05-18 21:11:43 (16360): Guest Log: 00:00:00.000205 main     Process ID: 1333
2024-05-18 21:11:43 (16360): Guest Log: 00:00:00.000205 main     Package type: LINUX_64BITS_GENERIC
2024-05-18 21:11:43 (16360): Guest Log: 00:00:00.000583 main     5.2.32 r132073 started. Verbose level = 0
2024-05-18 21:11:43 (16360): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-05-18 21:11:43 (16360): Guest Log: [INFO] Mounting shared directory
2024-05-18 21:11:43 (16360): Guest Log: [INFO] Checking for init_data.xml
2024-05-18 21:11:47 (16360): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-05-18 21:11:47 (16360): Guest Log: [INFO] Detected branch: prod
2024-05-18 21:11:48 (16360): Guest Log: This is the prod version of the ATLAS job wrapper
2024-05-18 21:11:48 (16360): Guest Log: Copying input files
2024-05-18 21:11:53 (16360): Guest Log: 00:00:10.007729 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 587 679 426 000ns (GuestNow=1 716 063 113 388 444 000 ns GuestLast=1 716 066 701 067 870 000 ns fSetTimeLastLoop=true )
2024-05-18 21:11:54 (16360): Guest Log: Copied input files into RunAtlas.
2024-05-18 21:11:54 (16360): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-05-18 21:11:54 (16360): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-05-18 21:11:54 (16360): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-05-18 21:11:54 (16360): Guest Log: Further information can be found at the LHC@home message board.
2024-05-18 21:12:08 (16360): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-05-18 21:12:09 (16360): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-05-18 21:12:09 (16360): Guest Log: 2.6.3.0 1608 0 30144 132888 4 1 3116989 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2024-05-18 21:12:11 (16360): Guest Log: copied the webapp to /var/www
2024-05-18 21:12:11 (16360): Guest Log: ATHENA_PROC_NUMBER=6
2024-05-18 21:12:11 (16360): Guest Log: ATHENA_CORE_NUMBER=6
2024-05-18 21:12:12 (16360): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-05-18 21:12:12 (16360): Guest Log:  *** Starting ATLAS job. (PandaID=6208378027 taskID=38920982) ***
2024-05-18 22:51:20 (16360): Status Report: Elapsed Time: '6000.000000'
2024-05-18 22:51:20 (16360): Status Report: CPU Time: '12537.828125'
2024-05-19 00:31:22 (16360): Status Report: Elapsed Time: '12000.000000'
2024-05-19 00:31:22 (16360): Status Report: CPU Time: '28772.671875'
2024-05-19 02:11:24 (16360): Status Report: Elapsed Time: '18000.000000'
2024-05-19 02:11:24 (16360): Status Report: CPU Time: '45012.000000'
2024-05-19 03:51:26 (16360): Status Report: Elapsed Time: '24000.000000'
2024-05-19 03:51:26 (16360): Status Report: CPU Time: '61253.406250'
2024-05-19 05:12:40 (16360): Guest Log:  *** Job finished ***
2024-05-19 05:12:40 (16360): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-05-19 05:12:40 (16360): Guest Log: 2024-05-19 04:12:26,759 | INFO     | [data] queue_monitor thread has finished
2024-05-19 05:12:40 (16360): Guest Log: 2024-05-19 04:12:32,239 | INFO     | job.realtimelogging is not enabled
2024-05-19 05:12:40 (16360): Guest Log: 2024-05-19 04:12:33,241 | INFO     | [payload] run_realtimelog thread has finished
2024-05-19 05:12:40 (16360): Guest Log: 2024-05-19 04:12:33,431 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139733332117312)>', '<ExcThread(monitor, started 139732449220352)>']
2024-05-19 05:12:40 (16360): Guest Log: 2024-05-19 04:12:34,338 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-05-19 05:12:40 (16360): Guest Log: 2024-05-19 04:12:34,338 | INFO     | [monitor] control thread has ended
2024-05-19 05:12:40 (16360): Guest Log: 2024-05-19 04:12:38,452 | INFO     | all workflow threads have been joined
2024-05-19 05:12:40 (16360): Guest Log: 2024-05-19 04:12:38,452 | INFO     | end of generic workflow (traces error code: 0)
2024-05-19 05:12:40 (16360): Guest Log: 2024-05-19 04:12:38,452 | INFO     | traces error code: 0
2024-05-19 05:12:40 (16360): Guest Log: 2024-05-19 04:12:38,452 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-05-19 05:12:40 (16360): Guest Log: 2024-05-19 04:12:38,673 [wrapper] ==== pilot stdout END ====
2024-05-19 05:12:40 (16360): Guest Log: 2024-05-19 04:12:38,676 [wrapper] ==== wrapper stdout RESUME ====
2024-05-19 05:12:40 (16360): Guest Log: 2024-05-19 04:12:38,678 [wrapper] pilotpid: 6508
2024-05-19 05:12:40 (16360): Guest Log: 2024-05-19 04:12:38,680 [wrapper] Pilot exit status: 0
2024-05-19 05:12:40 (16360): Guest Log: 2024-05-19 04:12:38,756 [wrapper] pandaids: 6208378027
2024-05-19 05:12:40 (16360): Guest Log: 2024-05-19 04:12:38,771 [wrapper] cleanup: SIGTERM to supervisor_pilot  1736 6509
2024-05-19 05:12:40 (16360): Guest Log: 2024-05-19 04:12:38,773 [wrapper] Test setup, not cleaning
2024-05-19 05:12:40 (16360): Guest Log: 2024-05-19 04:12:38,775 [wrapper] ==== wrapper stdout END ====
2024-05-19 05:12:40 (16360): Guest Log: 2024-05-19 04:12:38,778 [wrapper] ==== wrapper stderr END ====
2024-05-19 05:12:40 (16360): Guest Log: 2024-05-19 04:12:38,782 [wrapper] apfmon messages muted
2024-05-19 05:12:40 (16360): Guest Log:  *** Error codes and diagnostics ***
2024-05-19 05:12:40 (16360): Guest Log:     "exeErrorCode": 0,
2024-05-19 05:12:40 (16360): Guest Log:     "exeErrorDiag": "",
2024-05-19 05:12:40 (16360): Guest Log:     "pilotErrorCode": 0,
2024-05-19 05:12:40 (16360): Guest Log:     "pilotErrorDiag": "",
2024-05-19 05:12:40 (16360): Guest Log:  *** Listing of results directory ***
2024-05-19 05:12:40 (16360): Guest Log: total 313572
2024-05-19 05:12:40 (16360): Guest Log: -rw-r--r--. 1 atlas atlas    467845 May 18 00:42 pilot3.tar.gz
2024-05-19 05:12:40 (16360): Guest Log: -rwx------. 1 atlas atlas     32251 May 18 00:46 runpilot2-wrapper.sh
2024-05-19 05:12:40 (16360): Guest Log: -rw-r--r--. 1 atlas atlas      5633 May 18 00:46 queuedata.json
2024-05-19 05:12:40 (16360): Guest Log: -rwxr-xr-x. 1 atlas atlas     17537 May 18 20:11 start_atlas.sh
2024-05-19 05:12:40 (16360): Guest Log: -rwxr-xr-x. 1 atlas atlas    480009 May 18 20:11 input.tar.gz
2024-05-19 05:12:40 (16360): Guest Log: -rwxr-xr-x. 1 atlas atlas      9008 May 18 20:11 init_data.xml
2024-05-19 05:12:40 (16360): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 18 20:11 EVNT.38776160._000142.pool.root.1 -> /data/./ATLAS.root_0
2024-05-19 05:12:40 (16360): Guest Log: -rw-r--r--. 1 atlas atlas      2626 May 18 20:12 pandaJob.out
2024-05-19 05:12:40 (16360): Guest Log: -rw-------. 1 atlas atlas       424 May 18 20:12 setup.sh.local
2024-05-19 05:12:40 (16360): Guest Log: -rw-------. 1 atlas atlas   1019083 May 18 20:13 agis_schedconf.cvmfs.json
2024-05-19 05:12:40 (16360): Guest Log: -rw-------. 1 atlas atlas   1324701 May 18 20:13 cric_ddmendpoints.json
2024-05-19 05:12:40 (16360): Guest Log: drwx------. 4 atlas atlas      4096 May 18 20:13 pilot3
2024-05-19 05:12:40 (16360): Guest Log: -rw-------. 1 atlas atlas 311901520 May 19 04:11 HITS.38920982._003668.pool.root.1
2024-05-19 05:12:40 (16360): Guest Log: -rw-------. 1 atlas atlas        95 May 19 04:11 pilot_heartbeat.json
2024-05-19 05:12:40 (16360): Guest Log: -rw-------. 1 atlas atlas      1031 May 19 04:12 memory_monitor_summary.json
2024-05-19 05:12:40 (16360): Guest Log: -rw-------. 1 atlas atlas         0 May 19 04:12 agis_ddmendpoints.agis.ALL.json
2024-05-19 05:12:40 (16360): Guest Log: -rw-------. 1 atlas atlas    469769 May 19 04:12 log.38920982._003668.job.log.tgz.1
2024-05-19 05:12:40 (16360): Guest Log: -rw-------. 1 atlas atlas      7737 May 19 04:12 heartbeat.json
2024-05-19 05:12:40 (16360): Guest Log: -rw-------. 1 atlas atlas      4343 May 19 04:12 pilotlog.txt
2024-05-19 05:12:40 (16360): Guest Log: -rw-------. 1 atlas atlas   2394543 May 19 04:12 log.38920982._003668.job.log.1
2024-05-19 05:12:40 (16360): Guest Log: -rw-------. 1 atlas atlas       357 May 19 04:12 output.list
2024-05-19 05:12:40 (16360): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 19 04:12 runtime_log
2024-05-19 05:12:40 (16360): Guest Log: -rw-------. 1 atlas atlas   2887680 May 19 04:12 result.tar.gz
2024-05-19 05:12:40 (16360): Guest Log: -rw-r--r--. 1 atlas atlas     10934 May 19 04:12 runtime_log.err
2024-05-19 05:12:40 (16360): Guest Log: -rw-------. 1 atlas atlas       651 May 19 04:12 2n9NDmXONS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmgmRKDmJLgoAn.diag
2024-05-19 05:12:40 (16360): Guest Log: Looking for outputfile HITS.38920982._003668.pool.root.1
2024-05-19 05:12:40 (16360): Guest Log: HITS file was successfully produced
2024-05-19 05:12:40 (16360): Guest Log: -rw-------. 1 atlas atlas 311901520 May 19 04:11 /home/atlas/RunAtlas/HITS.38920982._003668.pool.root.1
2024-05-19 05:12:42 (16360): Guest Log: Successfully finished the ATLAS job!
2024-05-19 05:12:42 (16360): Guest Log: Copying the results back to the shared directory!
2024-05-19 05:12:42 (16360): Guest Log:  *** Contents of shared directory: ***
2024-05-19 05:12:42 (16360): Guest Log: total 923500
2024-05-19 05:12:42 (16360): Guest Log: -rwxrwxrwx. 1 root root 630358011 May 18 20:10 ATLAS.root_0
2024-05-19 05:12:42 (16360): Guest Log: -rwxrwxrwx. 1 root root 311901520 May 19 04:12 HITS.pool.root.1
2024-05-19 05:12:42 (16360): Guest Log: -rwxrwxrwx. 1 root root      9008 May 18 20:10 init_data.xml
2024-05-19 05:12:42 (16360): Guest Log: -rwxrwxrwx. 1 root root    480009 May 18 04:21 input.tar.gz
2024-05-19 05:12:42 (16360): Guest Log: -rwxrwxrwx. 1 root root   2887680 May 19 04:12 result.tar.gz
2024-05-19 05:12:42 (16360): Guest Log: -rwxrwxrwx. 1 root root     17537 May 18 04:21 start_atlas.sh
2024-05-19 05:12:42 (16360): Guest Log:  *** Success! Shutting down the machine. ***
2024-05-19 05:12:42 (16360): VM Completion File Detected.
2024-05-19 05:12:42 (16360): Powering off VM.
2024-05-19 05:12:42 (16360): Successfully stopped VM.
2024-05-19 05:12:42 (16360): Deregistering VM. (boinc_8d10ec03acd2d449, slot#0)
2024-05-19 05:12:42 (16360): Removing network bandwidth throttle group from VM.
2024-05-19 05:12:43 (16360): Removing VM from VirtualBox.
05:12:48 (16360): called boinc_finish(0)

</stderr_txt>
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