Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
05:06:02 (205359): wrapper (7.7.26015): starting
05:06:02 (205359): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 05:06:02] Arguments: --nthreads 12
[2024-05-18 05:06:02] Threads: 12
[2024-05-18 05:06:02] Checking for CVMFS
[2024-05-18 05:06:02] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 05:06:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 05:06:02] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 05:06:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 05:06:02] 2.10.1.0 183950 184892 206416 132878 0 279 33593174 45568001 10606 130560 0 1195172337 99.758 743381546 17657 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-05-18 05:06:02] CVMFS is ok
[2024-05-18 05:06:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 05:06:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 05:06:02] Further information can be found at the LHC@home message board.
[2024-05-18 05:06:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 05:06:02] Checking for apptainer binary...
[2024-05-18 05:06:02] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 05:06:02] Running /usr/bin/apptainer --version
[2024-05-18 05:06:02] apptainer version 1.1.8-1.el7
[2024-05-18 05:06:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 05:06:03] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0065.triumf.lcg
[2024-05-18 05:06:03] apptainer works
[2024-05-18 05:06:03] Set ATHENA_PROC_NUMBER=12
[2024-05-18 05:06:03] Set ATHENA_CORE_NUMBER=12
[2024-05-18 05:06:03] Starting ATLAS job with PandaID=6208377984
[2024-05-18 05:06:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 06:35:57]  *** The last 200 lines of the pilot log: ***
[2024-05-18 06:35:57]  direct_access_wan=False
[2024-05-18 06:35:57]  domain=
[2024-05-18 06:35:57]  filesize=381876
[2024-05-18 06:35:57]  filetype=log
[2024-05-18 06:35:57]  guid=92385bce-5093-4b62-a8f6-9f329b5ceca1
[2024-05-18 06:35:57]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-18 06:35:57]  is_tar=False
[2024-05-18 06:35:57]  lfn=log.38920982._003643.job.log.tgz.1
[2024-05-18 06:35:57]  mtime=0
[2024-05-18 06:35:57]  protocol_id=None
[2024-05-18 06:35:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-18 06:35:57]  replicas=None
[2024-05-18 06:35:57]  scope=mc23_13p6TeV
[2024-05-18 06:35:57]  status=None
[2024-05-18 06:35:57]  status_code=0
[2024-05-18 06:35:57]  storage_token=
[2024-05-18 06:35:57]  surl=/home/boinc/slots/0/PanDA_Pilot-6208377984/log.38920982._003643.job.log.tgz.1
[2024-05-18 06:35:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3b/68/log.38920982._003643.job.log.tgz.1
[2024-05-18 06:35:57]  workdir=None
[2024-05-18 06:35:57] ]
[2024-05-18 06:35:57] 2024-05-18 13:35:28,372 | INFO     | transferring file log.38920982._003643.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6208377984/log.38920982._003643.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-18 06:35:57] 2024-05-18 13:35:28,372 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6208377984/log.38920982._003643.job.log.tgz.1 /home/boinc/slots/0/log.38920982._003643.job.log.t
[2024-05-18 06:35:57] 2024-05-18 13:35:28,394 | INFO     | adding to output.list: log.38920982._003643.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3b/68/log.38920982._003643.job.log.tg
[2024-05-18 06:35:57] 2024-05-18 13:35:28,395 | INFO     | summary of transferred files:
[2024-05-18 06:35:57] 2024-05-18 13:35:28,396 | INFO     |  -- lfn=log.38920982._003643.job.log.tgz.1, status_code=0, status=transferred
[2024-05-18 06:35:57] 2024-05-18 13:35:28,396 | INFO     | stage-out finished correctly
[2024-05-18 06:35:57] 2024-05-18 13:35:29,280 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-18 06:35:57] 2024-05-18 13:35:30,680 | INFO     | job 6208377984 has state=finished
[2024-05-18 06:35:57] 2024-05-18 13:35:30,681 | INFO     | preparing for final server update for job 6208377984 in state='finished'
[2024-05-18 06:35:57] 2024-05-18 13:35:30,965 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2024-05-18 06:35:57] 2024-05-18 13:35:30,965 | INFO     | this job has now completed (state=finished)
[2024-05-18 06:35:57] 2024-05-18 13:35:30,965 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-18 06:35:57] 2024-05-18 13:35:30,966 | INFO     | job 6208377984 has finished - writing final server update
[2024-05-18 06:35:57] 2024-05-18 13:35:30,966 | INFO     | total number of processed events: 400 (read)
[2024-05-18 06:35:57] 2024-05-18 13:35:30,969 | INFO     | executing command: lscpu
[2024-05-18 06:35:57] 2024-05-18 13:35:31,027 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-18 06:35:57] 2024-05-18 13:35:31,028 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 06:35:57] 2024-05-18 13:35:31,080 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 06:35:57] 2024-05-18 13:35:34,839 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-18 06:35:57] 2024-05-18 13:35:34,843 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6208377984/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 06:35:57] 2024-05-18 13:35:34,846 | INFO     | extracted standard info from prmon json
[2024-05-18 06:35:57] 2024-05-18 13:35:34,846 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 06:35:57] 2024-05-18 13:35:34,846 | WARNING  | GPU info not found in prmon json
[2024-05-18 06:35:57] 2024-05-18 13:35:34,848 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 06:35:57] 2024-05-18 13:35:34,848 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 06:35:57] 2024-05-18 13:35:34,851 | INFO     | fitting pss+swap vs Time
[2024-05-18 06:35:57] 2024-05-18 13:35:34,851 | INFO     | model: linear, x: [1716034306.0, 1716034367.0, 1716034428.0, 1716034489.0, 1716034550.0, 1716034611.0, 1716034672.0, 1716034733.0, 1716034794.0, 1716034855.0, 1716
[2024-05-18 06:35:57] 2024-05-18 13:35:34,852 | INFO     | sum of square deviations: 164765880.0
[2024-05-18 06:35:57] 2024-05-18 13:35:34,852 | INFO     | sum of deviations: 28988505339.0
[2024-05-18 06:35:57] 2024-05-18 13:35:34,853 | INFO     | mean x: 1716036746.0
[2024-05-18 06:35:57] 2024-05-18 13:35:34,853 | INFO     | mean y: 2646598.111111111
[2024-05-18 06:35:57] 2024-05-18 13:35:34,853 | INFO     | -- intersect: -301912655121.7668
[2024-05-18 06:35:57] 2024-05-18 13:35:34,853 | INFO     | intersect: -301912655121.7668
[2024-05-18 06:35:57] 2024-05-18 13:35:34,853 | INFO     | chi2: 2.098279259495493
[2024-05-18 06:35:57] 2024-05-18 13:35:34,853 | INFO     | -- intersect: -301912655121.7668
[2024-05-18 06:35:57] 2024-05-18 13:35:34,853 | INFO     | current memory leak: 175.94 B/s (using 81 data points, chi2=2.10)
[2024-05-18 06:35:57] 2024-05-18 13:35:34,854 | INFO     | ..............................
[2024-05-18 06:35:57] 2024-05-18 13:35:34,854 | INFO     | . Timing measurements:
[2024-05-18 06:35:57] 2024-05-18 13:35:34,854 | INFO     | . get job = 0 s
[2024-05-18 06:35:57] 2024-05-18 13:35:34,854 | INFO     | . initial setup = 5 s
[2024-05-18 06:35:57] 2024-05-18 13:35:34,854 | INFO     | . payload setup = 5 s
[2024-05-18 06:35:57] 2024-05-18 13:35:34,855 | INFO     | . stage-in = 0 s
[2024-05-18 06:35:57] 2024-05-18 13:35:34,855 | INFO     | . payload execution = 5326 s
[2024-05-18 06:35:57] 2024-05-18 13:35:34,855 | INFO     | . stage-out = 0 s
[2024-05-18 06:35:57] 2024-05-18 13:35:34,855 | INFO     | . log creation = 0 s
[2024-05-18 06:35:57] 2024-05-18 13:35:34,855 | INFO     | ..............................
[2024-05-18 06:35:57] 2024-05-18 13:35:35,029 | WARNING  | process 218238 is no longer using CPU - aborting
[2024-05-18 06:35:57] 2024-05-18 13:35:35,029 | INFO     | aborting job monitoring since job object (job id=6208377984) has expired
[2024-05-18 06:35:57] 2024-05-18 13:35:35,405 | INFO     | 
[2024-05-18 06:35:57] 2024-05-18 13:35:35,405 | INFO     | job summary report
[2024-05-18 06:35:57] 2024-05-18 13:35:35,405 | INFO     | --------------------------------------------------
[2024-05-18 06:35:57] 2024-05-18 13:35:35,405 | INFO     | PanDA job id: 6208377984
[2024-05-18 06:35:57] 2024-05-18 13:35:35,405 | INFO     | task id: 38920982
[2024-05-18 06:35:57] 2024-05-18 13:35:35,405 | INFO     | errors: (none)
[2024-05-18 06:35:57] 2024-05-18 13:35:35,406 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 06:35:57] 2024-05-18 13:35:35,406 | INFO     | pilot state: finished 
[2024-05-18 06:35:57] 2024-05-18 13:35:35,406 | INFO     | transexitcode: 0
[2024-05-18 06:35:57] 2024-05-18 13:35:35,406 | INFO     | exeerrorcode: 0
[2024-05-18 06:35:57] 2024-05-18 13:35:35,406 | INFO     | exeerrordiag: 
[2024-05-18 06:35:57] 2024-05-18 13:35:35,406 | INFO     | exitcode: 0
[2024-05-18 06:35:57] 2024-05-18 13:35:35,406 | INFO     | exitmsg: OK
[2024-05-18 06:35:57] 2024-05-18 13:35:35,406 | INFO     | cpuconsumptiontime: 51340 s
[2024-05-18 06:35:57] 2024-05-18 13:35:35,406 | INFO     | nevents: 400
[2024-05-18 06:35:57] 2024-05-18 13:35:35,407 | INFO     | neventsw: 0
[2024-05-18 06:35:57] 2024-05-18 13:35:35,407 | INFO     | pid: 218238
[2024-05-18 06:35:57] 2024-05-18 13:35:35,407 | INFO     | pgrp: 218238
[2024-05-18 06:35:57] 2024-05-18 13:35:35,407 | INFO     | corecount: 12
[2024-05-18 06:35:57] 2024-05-18 13:35:35,407 | INFO     | event service: False
[2024-05-18 06:35:57] 2024-05-18 13:35:35,407 | INFO     | sizes: {0: 2392184, 4: 2392390, 11: 2392418, 5334: 2418896, 5336: 2427850, 5337: 2427906, 5342: 2428204}
[2024-05-18 06:35:57] 2024-05-18 13:35:35,407 | INFO     | --------------------------------------------------
[2024-05-18 06:35:57] 2024-05-18 13:35:35,407 | INFO     | 
[2024-05-18 06:35:57] 2024-05-18 13:35:35,407 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 06:35:57] 2024-05-18 13:35:35,430 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 06:35:57] 2024-05-18 13:35:35,430 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 06:35:57] 2024-05-18 13:35:35,430 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 06:35:57] 2024-05-18 13:35:35,431 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 06:35:57] 2024-05-18 13:35:35,431 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 06:35:57] 2024-05-18 13:35:35,431 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 06:35:57] 2024-05-18 13:35:35,431 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 06:35:57] 2024-05-18 13:35:35,431 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 06:35:57] 2024-05-18 13:35:35,431 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 06:35:57] 2024-05-18 13:35:35,431 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 06:35:57] 2024-05-18 13:35:35,431 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 06:35:57] 2024-05-18 13:35:35,431 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 06:35:57] 2024-05-18 13:35:35,431 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 06:35:57] 2024-05-18 13:35:35,431 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 06:35:57] 2024-05-18 13:35:35,431 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 06:35:57] 2024-05-18 13:35:35,431 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 06:35:57] 2024-05-18 13:35:35,431 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 06:35:57] 2024-05-18 13:35:35,431 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 06:35:57] 2024-05-18 13:35:35,431 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 06:35:57] 2024-05-18 13:35:35,431 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 06:35:57] 2024-05-18 13:35:35,431 | INFO     | job 6208377984 has completed (purged errors)
[2024-05-18 06:35:57] 2024-05-18 13:35:35,431 | INFO     | overall cleanup function is called
[2024-05-18 06:35:57] 2024-05-18 13:35:36,439 | INFO     | --- collectZombieJob: --- 10, [218238]
[2024-05-18 06:35:57] 2024-05-18 13:35:36,439 | INFO     | zombie collector waiting for pid 218238
[2024-05-18 06:35:57] 2024-05-18 13:35:36,439 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 06:35:57] 2024-05-18 13:35:37,444 | INFO     | collected zombie processes
[2024-05-18 06:35:57] 2024-05-18 13:35:37,445 | INFO     | will now attempt to kill all subprocesses of pid=218238
[2024-05-18 06:35:57] 2024-05-18 13:35:37,644 | INFO     | process IDs to be killed: [218238] (in reverse order)
[2024-05-18 06:35:57] 2024-05-18 13:35:37,767 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 06:35:57] 2024-05-18 13:35:37,768 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 06:35:57] 2024-05-18 13:35:37,774 | INFO     | did not find any defunct processes belonging to 218238
[2024-05-18 06:35:57] 2024-05-18 13:35:37,780 | INFO     | did not find any defunct processes belonging to 218238
[2024-05-18 06:35:57] 2024-05-18 13:35:37,780 | INFO     | ready for new job
[2024-05-18 06:35:57] 2024-05-18 13:35:37,781 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 06:35:57] 2024-05-18 13:35:37,782 | INFO     | *************************************
[2024-05-18 06:35:57] 2024-05-18 13:35:37,782 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 06:35:57] 2024-05-18 13:35:37,782 | INFO     | *************************************
[2024-05-18 06:35:57] 2024-05-18 13:35:37,782 | INFO     | 
[2024-05-18 06:35:57] 2024-05-18 13:35:37,784 | INFO     | architecture information:
[2024-05-18 06:35:57] 2024-05-18 13:35:37,785 | INFO     | executing command: cat /etc/os-release
[2024-05-18 06:35:57] 2024-05-18 13:35:37,806 | INFO     | cat /etc/os-release:
[2024-05-18 06:35:57] NAME="CentOS Linux"
[2024-05-18 06:35:57] VERSION="7 (Core)"
[2024-05-18 06:35:57] ID="centos"
[2024-05-18 06:35:57] ID_LIKE="rhel fedora"
[2024-05-18 06:35:57] VERSION_ID="7"
[2024-05-18 06:35:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 06:35:57] ANSI_COLOR="0;31"
[2024-05-18 06:35:57] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 06:35:57] HOME_URL="https://www.centos.org/"
[2024-05-18 06:35:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 06:35:57] 
[2024-05-18 06:35:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 06:35:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 06:35:57] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 06:35:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 06:35:57] 
[2024-05-18 06:35:57] 2024-05-18 13:35:37,806 | INFO     | *************************************
[2024-05-18 06:35:57] 2024-05-18 13:35:38,309 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 06:35:57] 2024-05-18 13:35:38,330 | INFO     | sufficient remaining disk space (2058340007936 B)
[2024-05-18 06:35:57] 2024-05-18 13:35:38,330 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 06:35:57] 2024-05-18 13:35:38,330 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 06:35:57] 2024-05-18 13:35:38,331 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-18 06:35:57] 2024-05-18 13:35:38,331 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 06:35:57] 2024-05-18 13:35:38,331 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 06:35:57] 2024-05-18 13:35:38,331 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 06:35:57] 2024-05-18 13:35:38,536 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 06:35:57] 2024-05-18 13:35:38,537 | INFO     | aborting loop
[2024-05-18 06:35:57] 2024-05-18 13:35:38,968 | INFO     | all data control threads have been joined
[2024-05-18 06:35:57] 2024-05-18 13:35:38,980 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 06:35:57] 2024-05-18 13:35:39,174 | INFO     | all job control threads have been joined
[2024-05-18 06:35:57] 2024-05-18 13:35:39,331 | INFO     | [job] retrieve thread has finished
[2024-05-18 06:35:57] 2024-05-18 13:35:39,434 | INFO     | [job] validate thread has finished
[2024-05-18 06:35:57] 2024-05-18 13:35:39,437 | INFO     | all payload control threads have been joined
[2024-05-18 06:35:57] 2024-05-18 13:35:39,541 | INFO     | [job] job monitor thread has finished
[2024-05-18 06:35:57] 2024-05-18 13:35:39,670 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 06:35:57] 2024-05-18 13:35:39,838 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 06:35:57] 2024-05-18 13:35:39,958 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 06:35:57] 2024-05-18 13:35:39,972 | INFO     | [data] control thread has finished
[2024-05-18 06:35:57] 2024-05-18 13:35:40,041 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 06:35:57] 2024-05-18 13:35:40,179 | INFO     | [job] control thread has finished
[2024-05-18 06:35:57] 2024-05-18 13:35:40,382 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 06:35:57] 2024-05-18 13:35:40,443 | INFO     | [payload] control thread has finished
[2024-05-18 06:35:57] 2024-05-18 13:35:40,798 | INFO     | [data] copytool_in thread has finished
[2024-05-18 06:35:57] 2024-05-18 13:35:40,921 | INFO     | [payload] failed_post thread has finished
[2024-05-18 06:35:57] 2024-05-18 13:35:40,932 | INFO     | [payload] validate_post thread has finished
[2024-05-18 06:35:57] 2024-05-18 13:35:40,964 | INFO     | [job] queue monitor thread has finished
[2024-05-18 06:35:57] 2024-05-18 13:35:40,985 | INFO     | [data] copytool_out thread has finished
[2024-05-18 06:35:57] 2024-05-18 13:35:43,844 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 06:35:57] 2024-05-18 13:35:48,844 | INFO     | job.realtimelogging is not enabled
[2024-05-18 06:35:57] 2024-05-18 13:35:49,849 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 06:35:57] 2024-05-18 13:35:51,719 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140170937390912)>', '<ExcThread(monitor, started 140170519099136)>']
[2024-05-18 06:35:57] 2024-05-18 13:35:52,386 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 06:35:57] 2024-05-18 13:35:52,386 | INFO     | [monitor] control thread has ended
[2024-05-18 06:35:57] 2024-05-18 13:35:56,745 | INFO     | all workflow threads have been joined
[2024-05-18 06:35:57] 2024-05-18 13:35:56,745 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 06:35:57] 2024-05-18 13:35:56,745 | INFO     | traces error code: 0
[2024-05-18 06:35:57] 2024-05-18 13:35:56,746 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 06:35:57] 2024-05-18 13:35:56,849 [wrapper] ==== pilot stdout END ====
[2024-05-18 06:35:57] 2024-05-18 13:35:56,853 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 06:35:57] 2024-05-18 13:35:56,857 [wrapper] pilotpid: 211677
[2024-05-18 06:35:57] 2024-05-18 13:35:56,861 [wrapper] Pilot exit status: 0
[2024-05-18 06:35:57] 2024-05-18 13:35:56,872 [wrapper] pandaids: 6208377984
[2024-05-18 06:35:57] 2024-05-18 13:35:56,968 [wrapper] cleanup: SIGTERM to supervisor_pilot  49589 211678
[2024-05-18 06:35:57] 2024-05-18 13:35:56,971 [wrapper] Test setup, not cleaning
[2024-05-18 06:35:57] 2024-05-18 13:35:56,973 [wrapper] ==== wrapper stdout END ====
[2024-05-18 06:35:57] 2024-05-18 13:35:56,975 [wrapper] ==== wrapper stderr END ====
[2024-05-18 06:35:57] 2024-05-18 13:35:56,980 [wrapper] apfmon messages muted
[2024-05-18 06:35:57]  *** Error codes and diagnostics ***
[2024-05-18 06:35:57]     "exeErrorCode": 0,
[2024-05-18 06:35:57]     "exeErrorDiag": "",
[2024-05-18 06:35:57]     "pilotErrorCode": 0,
[2024-05-18 06:35:57]     "pilotErrorDiag": "",
[2024-05-18 06:35:57]  *** Listing of results directory ***
[2024-05-18 06:35:57] total 920492
[2024-05-18 06:35:57] -rw-r--r-- 1 boinc boinc    467845 May 17 17:42 pilot3.tar.gz
[2024-05-18 06:35:57] -rwx------ 1 boinc boinc     32251 May 17 17:45 runpilot2-wrapper.sh
[2024-05-18 06:35:57] -rw-r--r-- 1 boinc boinc      5633 May 17 17:45 queuedata.json
[2024-05-18 06:35:57] -rw-r--r-- 1 boinc boinc       100 May 18 05:06 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 06:35:57] -rwxr-xr-x 1 boinc boinc      7986 May 18 05:06 run_atlas
[2024-05-18 06:35:57] -rw-r--r-- 1 boinc boinc       105 May 18 05:06 job.xml
[2024-05-18 06:35:57] -rw-r--r-- 2 boinc boinc 630290243 May 18 05:06 EVNT.38776160._000141.pool.root.1
[2024-05-18 06:35:57] -rw-r--r-- 1 boinc boinc      6627 May 18 05:06 init_data.xml
[2024-05-18 06:35:57] -rw-r--r-- 2 boinc boinc    480003 May 18 05:06 input.tar.gz
[2024-05-18 06:35:57] -rw-r--r-- 2 boinc boinc     17537 May 18 05:06 start_atlas.sh
[2024-05-18 06:35:57] drwxrwx--x 2 boinc boinc      4096 May 18 05:06 shared
[2024-05-18 06:35:57] -rw-r--r-- 1 boinc boinc         0 May 18 05:06 boinc_lockfile
[2024-05-18 06:35:57] -rw-r--r-- 1 boinc boinc      2626 May 18 05:06 pandaJob.out
[2024-05-18 06:35:57] -rw------- 1 boinc boinc       424 May 18 05:06 setup.sh.local
[2024-05-18 06:35:57] -rw------- 1 boinc boinc   1019073 May 18 05:06 agis_schedconf.cvmfs.json
[2024-05-18 06:35:57] -rw------- 1 boinc boinc         0 May 18 05:06 agis_ddmendpoints.agis.ALL.json
[2024-05-18 06:35:57] -rw------- 1 boinc boinc   1324701 May 18 05:06 cric_ddmendpoints.json
[2024-05-18 06:35:57] drwx------ 4 boinc boinc      4096 May 18 05:06 pilot3
[2024-05-18 06:35:57] -rw------- 1 boinc boinc 306956452 May 18 06:34 HITS.38920982._003643.pool.root.1
[2024-05-18 06:35:57] -rw-r--r-- 1 boinc boinc       530 May 18 06:35 boinc_task_state.xml
[2024-05-18 06:35:57] -rw------- 1 boinc boinc      1059 May 18 06:35 memory_monitor_summary.json
[2024-05-18 06:35:57] -rw------- 1 boinc boinc        95 May 18 06:35 pilot_heartbeat.json
[2024-05-18 06:35:57] -rw------- 1 boinc boinc    381876 May 18 06:35 log.38920982._003643.job.log.tgz.1
[2024-05-18 06:35:57] -rw------- 1 boinc boinc      7772 May 18 06:35 heartbeat.json
[2024-05-18 06:35:57] -rw-r--r-- 1 boinc boinc        27 May 18 06:35 wrapper_checkpoint.txt
[2024-05-18 06:35:57] -rw-r--r-- 1 boinc boinc      8192 May 18 06:35 boinc_mmap_file
[2024-05-18 06:35:57] -rw------- 1 boinc boinc      4405 May 18 06:35 pilotlog.txt
[2024-05-18 06:35:57] -rw------- 1 boinc boinc    519758 May 18 06:35 log.38920982._003643.job.log.1
[2024-05-18 06:35:57] -rw------- 1 boinc boinc       357 May 18 06:35 output.list
[2024-05-18 06:35:57] -rw-r--r-- 1 boinc boinc       620 May 18 06:35 runtime_log
[2024-05-18 06:35:57] -rw------- 1 boinc boinc    921600 May 18 06:35 result.tar.gz
[2024-05-18 06:35:57] -rw------- 1 boinc boinc       652 May 18 06:35 Sx4KDmbNNS5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmTbLKDma8lO2m.diag
[2024-05-18 06:35:57] -rw-r--r-- 1 boinc boinc     11286 May 18 06:35 runtime_log.err
[2024-05-18 06:35:57] -rw-r--r-- 1 boinc boinc     21422 May 18 06:35 stderr.txt
[2024-05-18 06:35:57] HITS file was successfully produced:
[2024-05-18 06:35:57] -rw------- 1 boinc boinc 306956452 May 18 06:34 shared/HITS.pool.root.1
[2024-05-18 06:35:57]  *** Contents of shared directory: ***
[2024-05-18 06:35:57] total 916684
[2024-05-18 06:35:57] -rw-r--r-- 2 boinc boinc 630290243 May 18 05:06 ATLAS.root_0
[2024-05-18 06:35:57] -rw-r--r-- 2 boinc boinc    480003 May 18 05:06 input.tar.gz
[2024-05-18 06:35:57] -rw-r--r-- 2 boinc boinc     17537 May 18 05:06 start_atlas.sh
[2024-05-18 06:35:57] -rw------- 1 boinc boinc 306956452 May 18 06:34 HITS.pool.root.1
[2024-05-18 06:35:57] -rw------- 1 boinc boinc    921600 May 18 06:35 result.tar.gz
06:35:59 (205359): run_atlas exited; CPU time 51156.572749
06:35:59 (205359): called boinc_finish(0)

</stderr_txt>
]]>

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