Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:47:23 (34376): wrapper (7.7.26015): starting
00:47:23 (34376): wrapper: running run_atlas (--nthreads 8)
[2024-05-18 00:47:23] Arguments: --nthreads 8
[2024-05-18 00:47:23] Threads: 8
[2024-05-18 00:47:23] Checking for CVMFS
[2024-05-18 00:47:24] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 00:47:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 00:47:24] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 00:47:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 00:47:25] 2.11.2.0 46942 2516 116464 132867 1 209 18333206 18432000 20245 130560 0 18122181 98.522 58265170 66563 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-05-18 00:47:25] CVMFS is ok
[2024-05-18 00:47:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 00:47:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 00:47:25] Further information can be found at the LHC@home message board.
[2024-05-18 00:47:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 00:47:25] Checking for apptainer binary...
[2024-05-18 00:47:25] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 00:47:25] Running /usr/bin/apptainer --version
[2024-05-18 00:47:25] apptainer version 1.3.0-1.el7
[2024-05-18 00:47:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 00:47:30] c-212-14.aglt2.org
[2024-05-18 00:47:30] apptainer works
[2024-05-18 00:47:30] Set ATHENA_PROC_NUMBER=8
[2024-05-18 00:47:30] Set ATHENA_CORE_NUMBER=8
[2024-05-18 00:47:31] Starting ATLAS job with PandaID=6208377976
[2024-05-18 00:47:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 05:42:14]  *** The last 200 lines of the pilot log: ***
[2024-05-18 05:42:14] 2024-05-18 09:41:38,446 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 05:42:14] 2024-05-18 09:41:40,950 | INFO     | monitor loop #1275: job 0:6208377976 is in state 'finished'
[2024-05-18 05:42:14] 2024-05-18 09:41:40,950 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 05:42:14] 2024-05-18 09:41:41,181 | INFO     | 17598s have passed since pilot start
[2024-05-18 05:42:14] 2024-05-18 09:41:43,455 | INFO     | monitor loop #1276: job 0:6208377976 is in state 'finished'
[2024-05-18 05:42:14] 2024-05-18 09:41:43,456 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 05:42:14] 2024-05-18 09:41:45,962 | INFO     | monitor loop #1277: job 0:6208377976 is in state 'finished'
[2024-05-18 05:42:14] 2024-05-18 09:41:45,963 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 05:42:14] 2024-05-18 09:41:48,467 | INFO     | monitor loop #1278: job 0:6208377976 is in state 'finished'
[2024-05-18 05:42:14] 2024-05-18 09:41:48,468 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 05:42:14] 2024-05-18 09:41:50,973 | INFO     | monitor loop #1279: job 0:6208377976 is in state 'finished'
[2024-05-18 05:42:14] 2024-05-18 09:41:50,974 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 05:42:14] 2024-05-18 09:41:53,481 | INFO     | monitor loop #1280: job 0:6208377976 is in state 'finished'
[2024-05-18 05:42:14] 2024-05-18 09:41:53,484 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 05:42:14] 2024-05-18 09:41:55,483 | INFO     | CPU arch script returned: x86-64-v3
[2024-05-18 05:42:14] 2024-05-18 09:41:55,492 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6208377976/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 05:42:14] 2024-05-18 09:41:55,493 | INFO     | extracted standard info from prmon json
[2024-05-18 05:42:14] 2024-05-18 09:41:55,493 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 05:42:14] 2024-05-18 09:41:55,493 | WARNING  | GPU info not found in prmon json
[2024-05-18 05:42:14] 2024-05-18 09:41:55,493 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 05:42:14] 2024-05-18 09:41:55,493 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 05:42:14] 2024-05-18 09:41:55,538 | INFO     | fitting pss+swap vs Time
[2024-05-18 05:42:14] 2024-05-18 09:41:55,538 | INFO     | model: linear, x: [1716007832.0, 1716007893.0, 1716007954.0, 1716008015.0, 1716008076.0, 1716008137.0, 1716008198.0, 1716008259.0, 1716008320.0, 1716008381.0, 1716
[2024-05-18 05:42:14] 2024-05-18 09:41:55,538 | INFO     | sum of square deviations: 7253902263.468534
[2024-05-18 05:42:14] 2024-05-18 09:41:55,553 | INFO     | sum of deviations: 483193004790.0696
[2024-05-18 05:42:14] 2024-05-18 09:41:55,553 | INFO     | mean x: 1716016524.5104895
[2024-05-18 05:42:14] 2024-05-18 09:41:55,553 | INFO     | mean y: 2322297.643356643
[2024-05-18 05:42:14] 2024-05-18 09:41:55,553 | INFO     | -- intersect: -114304040075.5326
[2024-05-18 05:42:14] 2024-05-18 09:41:55,553 | INFO     | intersect: -114304040075.5326
[2024-05-18 05:42:14] 2024-05-18 09:41:55,553 | INFO     | chi2: 15.69538820084886
[2024-05-18 05:42:14] 2024-05-18 09:41:55,554 | INFO     | model: linear, x: [1716007832.0, 1716007893.0, 1716007954.0, 1716008015.0, 1716008076.0, 1716008137.0, 1716008198.0, 1716008259.0, 1716008320.0, 1716008381.0, 1716
[2024-05-18 05:42:14] 2024-05-18 09:41:55,554 | INFO     | sum of square deviations: 6880063610.96798
[2024-05-18 05:42:14] 2024-05-18 09:41:55,555 | INFO     | sum of deviations: 493175276554.2741
[2024-05-18 05:42:14] 2024-05-18 09:41:55,555 | INFO     | mean x: 1716016372.0106761
[2024-05-18 05:42:14] 2024-05-18 09:41:55,556 | INFO     | mean y: 2326254.2419928825
[2024-05-18 05:42:14] 2024-05-18 09:41:55,556 | INFO     | -- intersect: -123004799361.41185
[2024-05-18 05:42:14] 2024-05-18 09:41:55,556 | INFO     | intersect: -123004799361.41185
[2024-05-18 05:42:14] 2024-05-18 09:41:55,556 | INFO     | chi2: 14.779873454134888
[2024-05-18 05:42:14] 2024-05-18 09:41:55,556 | INFO     | current chi2=14.779873454134888 (change=5.833017539919518 %)
[2024-05-18 05:42:14] 2024-05-18 09:41:55,556 | INFO     | right removable region: 280
[2024-05-18 05:42:14] 2024-05-18 09:41:55,575 | INFO     | model: linear, x: [1716008137.0, 1716008198.0, 1716008259.0, 1716008320.0, 1716008381.0, 1716008442.0, 1716008503.0, 1716008564.0, 1716008625.0, 1716008686.0, 1716
[2024-05-18 05:42:14] 2024-05-18 09:41:55,576 | INFO     | sum of square deviations: 6880061780.96798
[2024-05-18 05:42:14] 2024-05-18 09:41:55,577 | INFO     | sum of deviations: 401015121938.687
[2024-05-18 05:42:14] 2024-05-18 09:41:55,577 | INFO     | mean x: 1716016677.0106761
[2024-05-18 05:42:14] 2024-05-18 09:41:55,577 | INFO     | mean y: 2355774.43772242
[2024-05-18 05:42:14] 2024-05-18 09:41:55,578 | INFO     | -- intersect: -100018350272.68715
[2024-05-18 05:42:14] 2024-05-18 09:41:55,578 | INFO     | intersect: -100018350272.68715
[2024-05-18 05:42:14] 2024-05-18 09:41:55,578 | INFO     | chi2: 12.170593367162983
[2024-05-18 05:42:14] 2024-05-18 09:41:55,578 | INFO     | current chi2=12.170593367162983 (change=22.457519295351002 %)
[2024-05-18 05:42:14] 2024-05-18 09:41:55,578 | INFO     | left removable region: 10
[2024-05-18 05:42:14] 2024-05-18 09:41:55,578 | INFO     | model: linear, x: [1716008442.0, 1716008503.0, 1716008564.0, 1716008625.0, 1716008686.0, 1716008747.0, 1716008808.0, 1716008869.0, 1716008930.0, 1716008991.0, 1716
[2024-05-18 05:42:14] 2024-05-18 09:41:55,578 | INFO     | sum of square deviations: 6103293911.466634
[2024-05-18 05:42:14] 2024-05-18 09:41:55,602 | INFO     | sum of deviations: 350111005968.59973
[2024-05-18 05:42:14] 2024-05-18 09:41:55,602 | INFO     | mean x: 1716016646.511111
[2024-05-18 05:42:14] 2024-05-18 09:41:55,602 | INFO     | mean y: 2386344.1333333333
[2024-05-18 05:42:14] 2024-05-18 09:41:55,602 | INFO     | -- intersect: -98435657617.68785
[2024-05-18 05:42:14] 2024-05-18 09:41:55,602 | INFO     | intersect: -98435657617.68785
[2024-05-18 05:42:14] 2024-05-18 09:41:55,603 | INFO     | chi2: 9.635097257747475
[2024-05-18 05:42:14] 2024-05-18 09:41:55,603 | INFO     | -- intersect: -98435657617.68785
[2024-05-18 05:42:14] 2024-05-18 09:41:55,603 | INFO     | current memory leak: 57.36 B/s (using 270 data points, chi2=9.64)
[2024-05-18 05:42:14] 2024-05-18 09:41:55,603 | INFO     | ..............................
[2024-05-18 05:42:14] 2024-05-18 09:41:55,603 | INFO     | . Timing measurements:
[2024-05-18 05:42:14] 2024-05-18 09:41:55,603 | INFO     | . get job = 0 s
[2024-05-18 05:42:14] 2024-05-18 09:41:55,603 | INFO     | . initial setup = 1 s
[2024-05-18 05:42:14] 2024-05-18 09:41:55,604 | INFO     | . payload setup = 34 s
[2024-05-18 05:42:14] 2024-05-18 09:41:55,604 | INFO     | . stage-in = 0 s
[2024-05-18 05:42:14] 2024-05-18 09:41:55,604 | INFO     | . payload execution = 17458 s
[2024-05-18 05:42:14] 2024-05-18 09:41:55,604 | INFO     | . stage-out = 4 s
[2024-05-18 05:42:14] 2024-05-18 09:41:55,604 | INFO     | . log creation = 1 s
[2024-05-18 05:42:14] 2024-05-18 09:41:55,604 | INFO     | ..............................
[2024-05-18 05:42:14] 2024-05-18 09:41:55,936 | INFO     | 
[2024-05-18 05:42:14] 2024-05-18 09:41:55,937 | INFO     | job summary report
[2024-05-18 05:42:14] 2024-05-18 09:41:55,937 | INFO     | --------------------------------------------------
[2024-05-18 05:42:14] 2024-05-18 09:41:55,937 | INFO     | PanDA job id: 6208377976
[2024-05-18 05:42:14] 2024-05-18 09:41:55,937 | INFO     | task id: 38920982
[2024-05-18 05:42:14] 2024-05-18 09:41:55,937 | INFO     | errors: (none)
[2024-05-18 05:42:14] 2024-05-18 09:41:55,937 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 05:42:14] 2024-05-18 09:41:55,937 | INFO     | pilot state: finished 
[2024-05-18 05:42:14] 2024-05-18 09:41:55,937 | INFO     | transexitcode: 0
[2024-05-18 05:42:14] 2024-05-18 09:41:55,937 | INFO     | exeerrorcode: 0
[2024-05-18 05:42:14] 2024-05-18 09:41:55,937 | INFO     | exeerrordiag: 
[2024-05-18 05:42:14] 2024-05-18 09:41:55,937 | INFO     | exitcode: 0
[2024-05-18 05:42:14] 2024-05-18 09:41:55,937 | INFO     | exitmsg: OK
[2024-05-18 05:42:14] 2024-05-18 09:41:55,937 | INFO     | cpuconsumptiontime: 68393 s
[2024-05-18 05:42:14] 2024-05-18 09:41:55,937 | INFO     | nevents: 400
[2024-05-18 05:42:14] 2024-05-18 09:41:55,937 | INFO     | neventsw: 0
[2024-05-18 05:42:14] 2024-05-18 09:41:55,937 | INFO     | pid: 95418
[2024-05-18 05:42:14] 2024-05-18 09:41:55,937 | INFO     | pgrp: 95418
[2024-05-18 05:42:14] 2024-05-18 09:41:55,938 | INFO     | corecount: 8
[2024-05-18 05:42:14] 2024-05-18 09:41:55,938 | INFO     | event service: False
[2024-05-18 05:42:14] 2024-05-18 09:41:55,938 | INFO     | sizes: {0: 2392188, 1: 2392216, 11: 2392216, 22: 2392244, 31: 2392478, 33: 2392506, 17497: 2424178, 17502: 2433138, 17504: 2433194, 17554: 2433364}
[2024-05-18 05:42:14] 2024-05-18 09:41:55,938 | INFO     | --------------------------------------------------
[2024-05-18 05:42:14] 2024-05-18 09:41:55,938 | INFO     | 
[2024-05-18 05:42:14] 2024-05-18 09:41:55,938 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2024-05-18 05:42:14] 2024-05-18 09:41:56,184 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 05:42:14] 2024-05-18 09:41:56,184 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 05:42:14] 2024-05-18 09:41:56,184 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 05:42:14] 2024-05-18 09:41:56,185 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 05:42:14] 2024-05-18 09:41:56,185 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 05:42:14] 2024-05-18 09:41:56,185 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 05:42:14] 2024-05-18 09:41:56,185 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 05:42:14] 2024-05-18 09:41:56,185 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 05:42:14] 2024-05-18 09:41:56,185 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 05:42:14] 2024-05-18 09:41:56,185 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 05:42:14] 2024-05-18 09:41:56,185 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 05:42:14] 2024-05-18 09:41:56,185 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 05:42:14] 2024-05-18 09:41:56,185 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 05:42:14] 2024-05-18 09:41:56,185 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 05:42:14] 2024-05-18 09:41:56,185 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 05:42:14] 2024-05-18 09:41:56,185 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 05:42:14] 2024-05-18 09:41:56,185 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 05:42:14] 2024-05-18 09:41:56,185 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 05:42:14] 2024-05-18 09:41:56,187 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 05:42:14] 2024-05-18 09:41:56,187 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 05:42:14] 2024-05-18 09:41:56,187 | INFO     | job 6208377976 has completed (purged errors)
[2024-05-18 05:42:14] 2024-05-18 09:41:56,188 | INFO     | overall cleanup function is called
[2024-05-18 05:42:14] 2024-05-18 09:41:57,196 | INFO     | --- collectZombieJob: --- 10, [95418]
[2024-05-18 05:42:14] 2024-05-18 09:41:57,197 | INFO     | zombie collector waiting for pid 95418
[2024-05-18 05:42:14] 2024-05-18 09:41:57,197 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 05:42:14] 2024-05-18 09:41:58,204 | INFO     | collected zombie processes
[2024-05-18 05:42:14] 2024-05-18 09:41:58,205 | INFO     | will now attempt to kill all subprocesses of pid=95418
[2024-05-18 05:42:14] 2024-05-18 09:41:58,710 | INFO     | process IDs to be killed: [95418] (in reverse order)
[2024-05-18 05:42:14] 2024-05-18 09:41:59,285 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 05:42:14] 2024-05-18 09:41:59,286 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 05:42:14] 2024-05-18 09:41:59,295 | INFO     | did not find any defunct processes belonging to 95418
[2024-05-18 05:42:14] 2024-05-18 09:41:59,302 | INFO     | did not find any defunct processes belonging to 95418
[2024-05-18 05:42:14] 2024-05-18 09:41:59,303 | INFO     | ready for new job
[2024-05-18 05:42:14] 2024-05-18 09:41:59,303 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 05:42:14] 2024-05-18 09:41:59,304 | INFO     | *************************************
[2024-05-18 05:42:14] 2024-05-18 09:41:59,304 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 05:42:14] 2024-05-18 09:41:59,304 | INFO     | *************************************
[2024-05-18 05:42:14] 2024-05-18 09:41:59,304 | INFO     | 
[2024-05-18 05:42:14] 2024-05-18 09:41:59,308 | INFO     | architecture information:
[2024-05-18 05:42:14] 2024-05-18 09:41:59,309 | INFO     | executing command: cat /etc/os-release
[2024-05-18 05:42:14] 2024-05-18 09:41:59,431 | INFO     | cat /etc/os-release:
[2024-05-18 05:42:14] NAME="CentOS Linux"
[2024-05-18 05:42:14] VERSION="7 (Core)"
[2024-05-18 05:42:14] ID="centos"
[2024-05-18 05:42:14] ID_LIKE="rhel fedora"
[2024-05-18 05:42:14] VERSION_ID="7"
[2024-05-18 05:42:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 05:42:14] ANSI_COLOR="0;31"
[2024-05-18 05:42:14] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 05:42:14] HOME_URL="https://www.centos.org/"
[2024-05-18 05:42:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 05:42:14] 
[2024-05-18 05:42:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 05:42:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 05:42:14] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 05:42:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 05:42:14] 
[2024-05-18 05:42:14] 2024-05-18 09:41:59,431 | INFO     | *************************************
[2024-05-18 05:42:14] 2024-05-18 09:41:59,943 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2024-05-18 05:42:14] 2024-05-18 09:42:00,083 | INFO     | sufficient remaining disk space (99526639616 B)
[2024-05-18 05:42:14] 2024-05-18 09:42:00,083 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 05:42:14] 2024-05-18 09:42:00,084 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 05:42:14] 2024-05-18 09:42:00,084 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 05:42:14] 2024-05-18 09:42:00,084 | INFO     | aborting loop
[2024-05-18 05:42:14] 2024-05-18 09:42:00,084 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 05:42:14] 2024-05-18 09:42:00,283 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 05:42:14] 2024-05-18 09:42:00,284 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 05:42:14] 2024-05-18 09:42:00,284 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 05:42:14] 2024-05-18 09:42:00,306 | INFO     | all payload control threads have been joined
[2024-05-18 05:42:14] 2024-05-18 09:42:00,610 | INFO     | all job control threads have been joined
[2024-05-18 05:42:14] 2024-05-18 09:42:00,881 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 05:42:14] 2024-05-18 09:42:01,085 | INFO     | all data control threads have been joined
[2024-05-18 05:42:14] 2024-05-18 09:42:01,089 | INFO     | [job] retrieve thread has finished
[2024-05-18 05:42:14] 2024-05-18 09:42:01,090 | INFO     | [job] job monitor thread has finished
[2024-05-18 05:42:14] 2024-05-18 09:42:01,196 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 05:42:14] 2024-05-18 09:42:01,199 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 05:42:14] 2024-05-18 09:42:01,203 | INFO     | [job] validate thread has finished
[2024-05-18 05:42:14] 2024-05-18 09:42:01,312 | INFO     | [payload] control thread has finished
[2024-05-18 05:42:14] 2024-05-18 09:42:01,616 | INFO     | [job] control thread has finished
[2024-05-18 05:42:14] 2024-05-18 09:42:01,635 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 05:42:14] 2024-05-18 09:42:01,765 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 05:42:14] 2024-05-18 09:42:01,853 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 05:42:14] 2024-05-18 09:42:01,886 | INFO     | [job] queue monitor thread has finished
[2024-05-18 05:42:14] 2024-05-18 09:42:02,027 | INFO     | [payload] failed_post thread has finished
[2024-05-18 05:42:14] 2024-05-18 09:42:02,073 | INFO     | [data] copytool_in thread has finished
[2024-05-18 05:42:14] 2024-05-18 09:42:02,091 | INFO     | [data] control thread has finished
[2024-05-18 05:42:14] 2024-05-18 09:42:02,093 | INFO     | [data] copytool_out thread has finished
[2024-05-18 05:42:14] 2024-05-18 09:42:02,415 | INFO     | [payload] validate_post thread has finished
[2024-05-18 05:42:14] 2024-05-18 09:42:05,862 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 05:42:14] 2024-05-18 09:42:06,665 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139645014050624)>', '<ExcThread(monitor, started 139644578539264)>']
[2024-05-18 05:42:14] 2024-05-18 09:42:07,322 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 05:42:14] 2024-05-18 09:42:07,323 | INFO     | [monitor] control thread has ended
[2024-05-18 05:42:14] 2024-05-18 09:42:11,691 | INFO     | all workflow threads have been joined
[2024-05-18 05:42:14] 2024-05-18 09:42:11,695 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 05:42:14] 2024-05-18 09:42:11,696 | INFO     | traces error code: 0
[2024-05-18 05:42:14] 2024-05-18 09:42:11,696 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 05:42:14] 2024-05-18 09:42:12,008 [wrapper] ==== pilot stdout END ====
[2024-05-18 05:42:14] 2024-05-18 09:42:12,061 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 05:42:14] 2024-05-18 09:42:12,115 [wrapper] pilotpid: 60892
[2024-05-18 05:42:14] 2024-05-18 09:42:12,158 [wrapper] Pilot exit status: 0
[2024-05-18 05:42:14] 2024-05-18 09:42:12,180 [wrapper] pandaids: 6208377976
[2024-05-18 05:42:14] 2024-05-18 09:42:12,335 [wrapper] cleanup: SIGTERM to supervisor_pilot 65875 60893
[2024-05-18 05:42:14] 2024-05-18 09:42:12,407 [wrapper] Test setup, not cleaning
[2024-05-18 05:42:14] 2024-05-18 09:42:12,459 [wrapper] ==== wrapper stdout END ====
[2024-05-18 05:42:14] 2024-05-18 09:42:12,505 [wrapper] ==== wrapper stderr END ====
[2024-05-18 05:42:14] 2024-05-18 09:42:12,564 [wrapper] apfmon messages muted
[2024-05-18 05:42:14]  *** Error codes and diagnostics ***
[2024-05-18 05:42:14]     "exeErrorCode": 0,
[2024-05-18 05:42:14]     "exeErrorDiag": "",
[2024-05-18 05:42:14]     "pilotErrorCode": 0,
[2024-05-18 05:42:14]     "pilotErrorDiag": "",
[2024-05-18 05:42:14]  *** Listing of results directory ***
[2024-05-18 05:42:14] total 920812
[2024-05-18 05:42:14] -rw-r--r-- 1 boincer umatlas    467845 May 17 20:42 pilot3.tar.gz
[2024-05-18 05:42:14] -rwx------ 1 boincer umatlas     32251 May 17 20:44 runpilot2-wrapper.sh
[2024-05-18 05:42:14] -rw-r--r-- 1 boincer umatlas      5633 May 17 20:44 queuedata.json
[2024-05-18 05:42:14] -rw-r--r-- 1 boincer umatlas       100 May 18 00:47 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 05:42:14] -rwxr-xr-x 1 boincer umatlas      7986 May 18 00:47 run_atlas
[2024-05-18 05:42:14] -rw-r--r-- 1 boincer umatlas       105 May 18 00:47 job.xml
[2024-05-18 05:42:14] drwxrwx--x 2 boincer umatlas      4096 May 18 00:47 shared
[2024-05-18 05:42:14] -rw-r--r-- 2 boincer umatlas    480003 May 18 00:47 input.tar.gz
[2024-05-18 05:42:14] -rw-r--r-- 2 boincer umatlas 630290243 May 18 00:47 EVNT.38776160._000141.pool.root.1
[2024-05-18 05:42:14] -rw-r--r-- 2 boincer umatlas     17537 May 18 00:47 start_atlas.sh
[2024-05-18 05:42:14] -rw-r--r-- 1 boincer umatlas         0 May 18 00:47 boinc_lockfile
[2024-05-18 05:42:14] -rw-r--r-- 1 boincer umatlas      2627 May 18 00:47 pandaJob.out
[2024-05-18 05:42:14] -rw------- 1 boincer umatlas       467 May 18 00:47 setup.sh.local
[2024-05-18 05:42:14] -rw------- 1 boincer umatlas   1019065 May 18 00:48 agis_schedconf.cvmfs.json
[2024-05-18 05:42:14] -rw------- 1 boincer umatlas   1324701 May 18 00:48 cric_ddmendpoints.json
[2024-05-18 05:42:14] drwx------ 4 boincer umatlas      4096 May 18 00:48 pilot3
[2024-05-18 05:42:14] -rw-r--r-- 1 boincer umatlas      6388 May 18 05:37 init_data.xml
[2024-05-18 05:42:14] -rw------- 1 boincer umatlas 304925688 May 18 05:39 HITS.38920982._003638.pool.root.1
[2024-05-18 05:42:14] -rw-r--r-- 1 boincer umatlas       531 May 18 05:39 boinc_task_state.xml
[2024-05-18 05:42:14] -rw------- 1 boincer umatlas      1083 May 18 05:40 memory_monitor_summary.json
[2024-05-18 05:42:14] -rw------- 1 boincer umatlas         0 May 18 05:41 agis_ddmendpoints.agis.ALL.json
[2024-05-18 05:42:14] -rw------- 1 boincer umatlas    438054 May 18 05:41 log.38920982._003638.job.log.tgz.1
[2024-05-18 05:42:14] -rw------- 1 boincer umatlas        95 May 18 05:41 pilot_heartbeat.json
[2024-05-18 05:42:14] -rw------- 1 boincer umatlas      7747 May 18 05:41 heartbeat.json
[2024-05-18 05:42:14] -rw-r--r-- 1 boincer umatlas        28 May 18 05:42 wrapper_checkpoint.txt
[2024-05-18 05:42:14] -rw-r--r-- 1 boincer umatlas      8192 May 18 05:42 boinc_mmap_file
[2024-05-18 05:42:14] -rw------- 1 boincer umatlas      4211 May 18 05:42 pilotlog.txt
[2024-05-18 05:42:14] -rw------- 1 boincer umatlas   1645033 May 18 05:42 log.38920982._003638.job.log.1
[2024-05-18 05:42:14] -rw------- 1 boincer umatlas       357 May 18 05:42 output.list
[2024-05-18 05:42:14] -rw-r--r-- 1 boincer umatlas       620 May 18 05:42 runtime_log
[2024-05-18 05:42:14] -rw------- 1 boincer umatlas   2099200 May 18 05:42 result.tar.gz
[2024-05-18 05:42:14] -rw-r--r-- 1 boincer umatlas     11405 May 18 05:42 runtime_log.err
[2024-05-18 05:42:14] -rw------- 1 boincer umatlas       652 May 18 05:42 ChXLDmZMNS5n7Olcko1bjSoqABFKDmABFKDmOtvXDmA1ZKDmIgSgdn.diag
[2024-05-18 05:42:14] -rw-r--r-- 1 boincer umatlas     21879 May 18 05:42 stderr.txt
[2024-05-18 05:42:14] HITS file was successfully produced:
[2024-05-18 05:42:14] -rw------- 1 boincer umatlas 304925688 May 18 05:39 shared/HITS.pool.root.1
[2024-05-18 05:42:14]  *** Contents of shared directory: ***
[2024-05-18 05:42:14] total 915852
[2024-05-18 05:42:14] -rw-r--r-- 2 boincer umatlas    480003 May 18 00:47 input.tar.gz
[2024-05-18 05:42:14] -rw-r--r-- 2 boincer umatlas 630290243 May 18 00:47 ATLAS.root_0
[2024-05-18 05:42:14] -rw-r--r-- 2 boincer umatlas     17537 May 18 00:47 start_atlas.sh
[2024-05-18 05:42:14] -rw------- 1 boincer umatlas 304925688 May 18 05:39 HITS.pool.root.1
[2024-05-18 05:42:14] -rw------- 1 boincer umatlas   2099200 May 18 05:42 result.tar.gz
05:42:15 (34376): run_atlas exited; CPU time 67032.925834
05:42:15 (34376): called boinc_finish(0)

</stderr_txt>
]]>

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