Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:12:35 (2378810): wrapper (7.7.26015): starting
18:12:35 (2378810): wrapper: running run_atlas (--nthreads 4)
[2024-05-20 18:12:35] Arguments: --nthreads 4
[2024-05-20 18:12:35] Threads: 4
[2024-05-20 18:12:35] Checking for CVMFS
[2024-05-20 18:12:35] No cvmfs_config command found, will try listing directly
[2024-05-20 18:12:35] CVMFS is ok
[2024-05-20 18:12:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-20 18:12:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-20 18:12:35] Further information can be found at the LHC@home message board.
[2024-05-20 18:12:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-20 18:12:35] Checking for apptainer binary...
[2024-05-20 18:12:35] which: no apptainer in ((null))
[2024-05-20 18:12:35] apptainer is not installed, using version from CVMFS
[2024-05-20 18:12:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-20 18:12:35] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2024-05-20 18:12:35] apptainer works
[2024-05-20 18:12:35] Set ATHENA_PROC_NUMBER=4
[2024-05-20 18:12:35] Set ATHENA_CORE_NUMBER=4
[2024-05-20 18:12:35] Starting ATLAS job with PandaID=6208377930
[2024-05-20 18:12:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-20 23:00:48]  *** The last 200 lines of the pilot log: ***
[2024-05-20 23:00:48] 2024-05-20 21:00:27,654 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-20 23:00:48] 2024-05-20 21:00:27,659 | INFO     | fitting pss+swap vs Time
[2024-05-20 23:00:48] 2024-05-20 21:00:27,659 | INFO     | model: linear, x: [1716221587.0, 1716221648.0, 1716221709.0, 1716221770.0, 1716221831.0, 1716221892.0, 1716221953.0, 1716222014.0, 1716222075.0, 1716222136.0, 1716
[2024-05-20 23:00:48] 2024-05-20 21:00:27,660 | INFO     | sum of square deviations: 7028008982.0
[2024-05-20 23:00:48] 2024-05-20 21:00:27,662 | INFO     | sum of deviations: 102872222741.0
[2024-05-20 23:00:48] 2024-05-20 21:00:27,662 | INFO     | mean x: 1716230188.0
[2024-05-20 23:00:48] 2024-05-20 21:00:27,662 | INFO     | mean y: 2322299.7067137808
[2024-05-20 23:00:48] 2024-05-20 21:00:27,662 | INFO     | -- intersect: -25118933894.892197
[2024-05-20 23:00:48] 2024-05-20 21:00:27,663 | INFO     | intersect: -25118933894.892197
[2024-05-20 23:00:48] 2024-05-20 21:00:27,663 | INFO     | chi2: 5.136439034400933
[2024-05-20 23:00:48] 2024-05-20 21:00:27,663 | INFO     | model: linear, x: [1716221587.0, 1716221648.0, 1716221709.0, 1716221770.0, 1716221831.0, 1716221892.0, 1716221953.0, 1716222014.0, 1716222075.0, 1716222136.0, 1716
[2024-05-20 23:00:48] 2024-05-20 21:00:27,664 | INFO     | sum of square deviations: 6662039329.5
[2024-05-20 23:00:48] 2024-05-20 21:00:27,666 | INFO     | sum of deviations: 118486769904.0
[2024-05-20 23:00:48] 2024-05-20 21:00:27,666 | INFO     | mean x: 1716230035.5
[2024-05-20 23:00:48] 2024-05-20 21:00:27,666 | INFO     | mean y: 2328700.848920863
[2024-05-20 23:00:48] 2024-05-20 21:00:27,666 | INFO     | -- intersect: -30521440862.949814
[2024-05-20 23:00:48] 2024-05-20 21:00:27,666 | INFO     | intersect: -30521440862.949814
[2024-05-20 23:00:48] 2024-05-20 21:00:27,666 | INFO     | chi2: 4.397522407459694
[2024-05-20 23:00:48] 2024-05-20 21:00:27,667 | INFO     | current chi2=4.397522407459694 (change=14.385776254568542 %)
[2024-05-20 23:00:48] 2024-05-20 21:00:27,667 | INFO     | right removable region: 277
[2024-05-20 23:00:48] 2024-05-20 21:00:27,667 | INFO     | model: linear, x: [1716221892.0, 1716221953.0, 1716222014.0, 1716222075.0, 1716222136.0, 1716222197.0, 1716222258.0, 1716222319.0, 1716222380.0, 1716222441.0, 1716
[2024-05-20 23:00:48] 2024-05-20 21:00:27,667 | INFO     | sum of square deviations: 6662039329.5
[2024-05-20 23:00:48] 2024-05-20 21:00:27,669 | INFO     | sum of deviations: 34926916857.500015
[2024-05-20 23:00:48] 2024-05-20 21:00:27,669 | INFO     | mean x: 1716230340.5
[2024-05-20 23:00:48] 2024-05-20 21:00:27,669 | INFO     | mean y: 2350560.5287769786
[2024-05-20 23:00:48] 2024-05-20 21:00:27,669 | INFO     | -- intersect: -8995289868.51103
[2024-05-20 23:00:48] 2024-05-20 21:00:27,670 | INFO     | intersect: -8995289868.51103
[2024-05-20 23:00:48] 2024-05-20 21:00:27,670 | INFO     | chi2: 2.5525563633311332
[2024-05-20 23:00:48] 2024-05-20 21:00:27,670 | INFO     | current chi2=2.5525563633311332 (change=50.30494188219563 %)
[2024-05-20 23:00:48] 2024-05-20 21:00:27,670 | INFO     | model: linear, x: [1716222197.0, 1716222258.0, 1716222319.0, 1716222380.0, 1716222441.0, 1716222502.0, 1716222563.0, 1716222624.0, 1716222685.0, 1716222746.0, 1716
[2024-05-20 23:00:48] 2024-05-20 21:00:27,671 | INFO     | sum of square deviations: 6309000152.0
[2024-05-20 23:00:48] 2024-05-20 21:00:27,673 | INFO     | sum of deviations: -20990824314.0
[2024-05-20 23:00:48] 2024-05-20 21:00:27,673 | INFO     | mean x: 1716230493.0
[2024-05-20 23:00:48] 2024-05-20 21:00:27,673 | INFO     | mean y: 2374715.395604396
[2024-05-20 23:00:48] 2024-05-20 21:00:27,673 | INFO     | -- intersect: 5712485968.043519
[2024-05-20 23:00:48] 2024-05-20 21:00:27,673 | INFO     | intersect: 5712485968.043519
[2024-05-20 23:00:48] 2024-05-20 21:00:27,673 | INFO     | chi2: 0.9310837725972594
[2024-05-20 23:00:48] 2024-05-20 21:00:27,673 | INFO     | current chi2=0.9310837725972594 (change=63.523478424500766 %)
[2024-05-20 23:00:48] 2024-05-20 21:00:27,674 | INFO     | model: linear, x: [1716222502.0, 1716222563.0, 1716222624.0, 1716222685.0, 1716222746.0, 1716222807.0, 1716222868.0, 1716222929.0, 1716222990.0, 1716223051.0, 1716
[2024-05-20 23:00:48] 2024-05-20 21:00:27,674 | INFO     | sum of square deviations: 5968658887.0
[2024-05-20 23:00:48] 2024-05-20 21:00:27,676 | INFO     | sum of deviations: -33818201597.500004
[2024-05-20 23:00:48] 2024-05-20 21:00:27,676 | INFO     | mean x: 1716230645.5
[2024-05-20 23:00:48] 2024-05-20 21:00:27,676 | INFO     | mean y: 2380431.8619402987
[2024-05-20 23:00:48] 2024-05-20 21:00:27,676 | INFO     | -- intersect: 9726480109.218248
[2024-05-20 23:00:48] 2024-05-20 21:00:27,676 | INFO     | intersect: 9726480109.218248
[2024-05-20 23:00:48] 2024-05-20 21:00:27,676 | INFO     | chi2: 0.8046372277336565
[2024-05-20 23:00:48] 2024-05-20 21:00:27,677 | INFO     | current chi2=0.8046372277336565 (change=13.580576590963458 %)
[2024-05-20 23:00:48] 2024-05-20 21:00:27,677 | INFO     | left removable region: 30
[2024-05-20 23:00:48] 2024-05-20 21:00:27,677 | INFO     | model: linear, x: [1716223417.0, 1716223478.0, 1716223539.0, 1716223600.0, 1716223661.0, 1716223722.0, 1716223783.0, 1716223844.0, 1716223905.0, 1716223966.0, 1716
[2024-05-20 23:00:48] 2024-05-20 21:00:27,677 | INFO     | sum of square deviations: 4672638308.0
[2024-05-20 23:00:48] 2024-05-20 21:00:27,679 | INFO     | sum of deviations: -16626352577.000002
[2024-05-20 23:00:48] 2024-05-20 21:00:27,679 | INFO     | mean x: 1716230920.0
[2024-05-20 23:00:48] 2024-05-20 21:00:27,679 | INFO     | mean y: 2388246.08097166
[2024-05-20 23:00:48] 2024-05-20 21:00:27,679 | INFO     | -- intersect: 6109143894.301172
[2024-05-20 23:00:48] 2024-05-20 21:00:27,679 | INFO     | intersect: 6109143894.301172
[2024-05-20 23:00:48] 2024-05-20 21:00:27,679 | INFO     | chi2: 0.021894567875692002
[2024-05-20 23:00:48] 2024-05-20 21:00:27,680 | INFO     | -- intersect: 6109143894.301172
[2024-05-20 23:00:48] 2024-05-20 21:00:27,680 | INFO     | current memory leak: -3.56 B/s (using 247 data points, chi2=0.02)
[2024-05-20 23:00:48] 2024-05-20 21:00:27,680 | INFO     | ..............................
[2024-05-20 23:00:48] 2024-05-20 21:00:27,681 | INFO     | . Timing measurements:
[2024-05-20 23:00:48] 2024-05-20 21:00:27,681 | INFO     | . get job = 0 s
[2024-05-20 23:00:48] 2024-05-20 21:00:27,681 | INFO     | . initial setup = 1 s
[2024-05-20 23:00:48] 2024-05-20 21:00:27,681 | INFO     | . payload setup = 4 s
[2024-05-20 23:00:48] 2024-05-20 21:00:27,681 | INFO     | . stage-in = 0 s
[2024-05-20 23:00:48] 2024-05-20 21:00:27,681 | INFO     | . payload execution = 17231 s
[2024-05-20 23:00:48] 2024-05-20 21:00:27,681 | INFO     | . stage-out = 1 s
[2024-05-20 23:00:48] 2024-05-20 21:00:27,681 | INFO     | . log creation = 0 s
[2024-05-20 23:00:48] 2024-05-20 21:00:27,681 | INFO     | ..............................
[2024-05-20 23:00:48] 2024-05-20 21:00:27,757 | INFO     | 
[2024-05-20 23:00:48] 2024-05-20 21:00:27,757 | INFO     | job summary report
[2024-05-20 23:00:48] 2024-05-20 21:00:27,758 | INFO     | --------------------------------------------------
[2024-05-20 23:00:48] 2024-05-20 21:00:27,758 | INFO     | PanDA job id: 6208377930
[2024-05-20 23:00:48] 2024-05-20 21:00:27,758 | INFO     | task id: 38920982
[2024-05-20 23:00:48] 2024-05-20 21:00:27,758 | INFO     | errors: (none)
[2024-05-20 23:00:48] 2024-05-20 21:00:27,758 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-20 23:00:48] 2024-05-20 21:00:27,758 | INFO     | pilot state: finished 
[2024-05-20 23:00:48] 2024-05-20 21:00:27,758 | INFO     | transexitcode: 0
[2024-05-20 23:00:48] 2024-05-20 21:00:27,758 | INFO     | exeerrorcode: 0
[2024-05-20 23:00:48] 2024-05-20 21:00:27,759 | INFO     | exeerrordiag: 
[2024-05-20 23:00:48] 2024-05-20 21:00:27,759 | INFO     | exitcode: 0
[2024-05-20 23:00:48] 2024-05-20 21:00:27,759 | INFO     | exitmsg: OK
[2024-05-20 23:00:48] 2024-05-20 21:00:27,759 | INFO     | cpuconsumptiontime: 65525 s
[2024-05-20 23:00:48] 2024-05-20 21:00:27,759 | INFO     | nevents: 400
[2024-05-20 23:00:48] 2024-05-20 21:00:27,759 | INFO     | neventsw: 0
[2024-05-20 23:00:48] 2024-05-20 21:00:27,759 | INFO     | pid: 2389853
[2024-05-20 23:00:48] 2024-05-20 21:00:27,759 | INFO     | pgrp: 2389853
[2024-05-20 23:00:48] 2024-05-20 21:00:27,760 | INFO     | corecount: 4
[2024-05-20 23:00:48] 2024-05-20 21:00:27,760 | INFO     | event service: False
[2024-05-20 23:00:48] 2024-05-20 21:00:27,760 | INFO     | sizes: {0: 2392198, 4: 2392404, 11: 2392432, 17240: 2424538, 17242: 2433520, 17244: 2433576, 17249: 2433874}
[2024-05-20 23:00:48] 2024-05-20 21:00:27,760 | INFO     | --------------------------------------------------
[2024-05-20 23:00:48] 2024-05-20 21:00:27,760 | INFO     | 
[2024-05-20 23:00:48] 2024-05-20 21:00:27,761 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2024-05-20 23:00:48] 2024-05-20 21:00:27,784 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-20 23:00:48] 2024-05-20 21:00:27,784 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-20 23:00:48] 2024-05-20 21:00:27,784 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-20 23:00:48] 2024-05-20 21:00:27,785 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-20 23:00:48] 2024-05-20 21:00:27,785 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-20 23:00:48] 2024-05-20 21:00:27,785 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-20 23:00:48] 2024-05-20 21:00:27,785 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-20 23:00:48] 2024-05-20 21:00:27,785 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-20 23:00:48] 2024-05-20 21:00:27,785 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-20 23:00:48] 2024-05-20 21:00:27,785 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-20 23:00:48] 2024-05-20 21:00:27,785 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-20 23:00:48] 2024-05-20 21:00:27,786 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-20 23:00:48] 2024-05-20 21:00:27,786 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-20 23:00:48] 2024-05-20 21:00:27,786 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-20 23:00:48] 2024-05-20 21:00:27,786 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-20 23:00:48] 2024-05-20 21:00:27,786 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-20 23:00:48] 2024-05-20 21:00:27,786 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-20 23:00:48] 2024-05-20 21:00:27,786 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-20 23:00:48] 2024-05-20 21:00:27,786 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-20 23:00:48] 2024-05-20 21:00:27,786 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-20 23:00:48] 2024-05-20 21:00:27,787 | INFO     | job 6208377930 has completed (purged errors)
[2024-05-20 23:00:48] 2024-05-20 21:00:27,787 | INFO     | overall cleanup function is called
[2024-05-20 23:00:48] 2024-05-20 21:00:28,795 | INFO     | --- collectZombieJob: --- 10, [2389853]
[2024-05-20 23:00:48] 2024-05-20 21:00:28,795 | INFO     | zombie collector waiting for pid 2389853
[2024-05-20 23:00:48] 2024-05-20 21:00:28,796 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-20 23:00:48] 2024-05-20 21:00:29,801 | INFO     | collected zombie processes
[2024-05-20 23:00:48] 2024-05-20 21:00:29,801 | INFO     | will now attempt to kill all subprocesses of pid=2389853
[2024-05-20 23:00:48] 2024-05-20 21:00:29,925 | INFO     | process IDs to be killed: [2389853] (in reverse order)
[2024-05-20 23:00:48] 2024-05-20 21:00:30,007 | WARNING  | found no corresponding commands to process id(s)
[2024-05-20 23:00:48] 2024-05-20 21:00:30,008 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-20 23:00:48] 2024-05-20 21:00:30,015 | INFO     | did not find any defunct processes belonging to 2389853
[2024-05-20 23:00:48] 2024-05-20 21:00:30,021 | INFO     | did not find any defunct processes belonging to 2389853
[2024-05-20 23:00:48] 2024-05-20 21:00:30,022 | INFO     | ready for new job
[2024-05-20 23:00:48] 2024-05-20 21:00:30,022 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-20 23:00:48] 2024-05-20 21:00:30,025 | INFO     | *************************************
[2024-05-20 23:00:48] 2024-05-20 21:00:30,026 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-20 23:00:48] 2024-05-20 21:00:30,026 | INFO     | *************************************
[2024-05-20 23:00:48] 2024-05-20 21:00:30,026 | INFO     | 
[2024-05-20 23:00:48] 2024-05-20 21:00:30,028 | INFO     | architecture information:
[2024-05-20 23:00:48] 2024-05-20 21:00:30,029 | INFO     | executing command: cat /etc/os-release
[2024-05-20 23:00:48] 2024-05-20 21:00:30,045 | INFO     | cat /etc/os-release:
[2024-05-20 23:00:48] NAME="CentOS Linux"
[2024-05-20 23:00:48] VERSION="7 (Core)"
[2024-05-20 23:00:48] ID="centos"
[2024-05-20 23:00:48] ID_LIKE="rhel fedora"
[2024-05-20 23:00:48] VERSION_ID="7"
[2024-05-20 23:00:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-20 23:00:48] ANSI_COLOR="0;31"
[2024-05-20 23:00:48] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-20 23:00:48] HOME_URL="https://www.centos.org/"
[2024-05-20 23:00:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-20 23:00:48] 
[2024-05-20 23:00:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-20 23:00:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-20 23:00:48] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-20 23:00:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-20 23:00:48] 
[2024-05-20 23:00:48] 2024-05-20 21:00:30,046 | INFO     | *************************************
[2024-05-20 23:00:48] 2024-05-20 21:00:30,549 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2024-05-20 23:00:48] 2024-05-20 21:00:30,570 | INFO     | sufficient remaining disk space (1626815332352 B)
[2024-05-20 23:00:48] 2024-05-20 21:00:30,570 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-20 23:00:48] 2024-05-20 21:00:30,571 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-20 23:00:48] 2024-05-20 21:00:30,571 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-20 23:00:48] 2024-05-20 21:00:30,571 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-20 23:00:48] 2024-05-20 21:00:30,572 | INFO     | aborting loop
[2024-05-20 23:00:48] 2024-05-20 21:00:30,572 | INFO     | found 0 job(s) in 20 queues
[2024-05-20 23:00:48] 2024-05-20 21:00:30,572 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-20 23:00:48] 2024-05-20 21:00:30,572 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-20 23:00:48] 2024-05-20 21:00:31,165 | INFO     | all data control threads have been joined
[2024-05-20 23:00:48] 2024-05-20 21:00:31,486 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-20 23:00:48] 2024-05-20 21:00:31,576 | INFO     | [job] retrieve thread has finished
[2024-05-20 23:00:48] 2024-05-20 21:00:31,578 | INFO     | [job] job monitor thread has finished
[2024-05-20 23:00:48] 2024-05-20 21:00:31,606 | INFO     | [payload] validate_pre thread has finished
[2024-05-20 23:00:48] 2024-05-20 21:00:31,982 | INFO     | all payload control threads have been joined
[2024-05-20 23:00:48] 2024-05-20 21:00:31,993 | INFO     | [payload] failed_post thread has finished
[2024-05-20 23:00:48] 2024-05-20 21:00:32,135 | INFO     | [data] copytool_in thread has finished
[2024-05-20 23:00:48] 2024-05-20 21:00:32,171 | INFO     | [data] control thread has finished
[2024-05-20 23:00:48] 2024-05-20 21:00:32,180 | INFO     | all job control threads have been joined
[2024-05-20 23:00:48] 2024-05-20 21:00:32,385 | INFO     | [payload] validate_post thread has finished
[2024-05-20 23:00:48] 2024-05-20 21:00:32,741 | INFO     | [job] create_data_payload thread has finished
[2024-05-20 23:00:48] 2024-05-20 21:00:32,767 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-20 23:00:48] 2024-05-20 21:00:32,932 | INFO     | [job] validate thread has finished
[2024-05-20 23:00:48] 2024-05-20 21:00:32,987 | INFO     | [payload] control thread has finished
[2024-05-20 23:00:48] 2024-05-20 21:00:33,035 | INFO     | [payload] execute_payloads thread has finished
[2024-05-20 23:00:48] 2024-05-20 21:00:33,186 | INFO     | [job] control thread has finished
[2024-05-20 23:00:48] 2024-05-20 21:00:33,188 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-20 23:00:48] 2024-05-20 21:00:33,492 | INFO     | [data] copytool_out thread has finished
[2024-05-20 23:00:48] 2024-05-20 21:00:33,773 | INFO     | [job] queue monitor thread has finished
[2024-05-20 23:00:48] 2024-05-20 21:00:37,194 | INFO     | [data] queue_monitor thread has finished
[2024-05-20 23:00:48] 2024-05-20 21:00:41,104 | INFO     | job.realtimelogging is not enabled
[2024-05-20 23:00:48] 2024-05-20 21:00:42,109 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-20 23:00:48] 2024-05-20 21:00:42,595 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47182885606464)>', '<ExcThread(monitor, started 47183054747392)>']
[2024-05-20 23:00:48] 2024-05-20 21:00:42,631 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-20 23:00:48] 2024-05-20 21:00:42,631 | INFO     | [monitor] control thread has ended
[2024-05-20 23:00:48] 2024-05-20 21:00:47,621 | INFO     | all workflow threads have been joined
[2024-05-20 23:00:48] 2024-05-20 21:00:47,621 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-20 23:00:48] 2024-05-20 21:00:47,621 | INFO     | traces error code: 0
[2024-05-20 23:00:48] 2024-05-20 21:00:47,622 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-20 23:00:48] 2024-05-20 21:00:47,714 [wrapper] ==== pilot stdout END ====
[2024-05-20 23:00:48] 2024-05-20 21:00:47,718 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-20 23:00:48] 2024-05-20 21:00:47,721 [wrapper] pilotpid: 2383023
[2024-05-20 23:00:48] 2024-05-20 21:00:47,724 [wrapper] Pilot exit status: 0
[2024-05-20 23:00:48] 2024-05-20 21:00:47,735 [wrapper] pandaids: 6208377930
[2024-05-20 23:00:48] 2024-05-20 21:00:47,798 [wrapper] cleanup: SIGTERM to supervisor_pilot 2721785 2383024
[2024-05-20 23:00:48] 2024-05-20 21:00:47,802 [wrapper] Test setup, not cleaning
[2024-05-20 23:00:48] 2024-05-20 21:00:47,805 [wrapper] ==== wrapper stdout END ====
[2024-05-20 23:00:48] 2024-05-20 21:00:47,808 [wrapper] ==== wrapper stderr END ====
[2024-05-20 23:00:48] 2024-05-20 21:00:47,814 [wrapper] apfmon messages muted
[2024-05-20 23:00:48]  *** Error codes and diagnostics ***
[2024-05-20 23:00:48]     "exeErrorCode": 0,
[2024-05-20 23:00:48]     "exeErrorDiag": "",
[2024-05-20 23:00:48]     "pilotErrorCode": 0,
[2024-05-20 23:00:48]     "pilotErrorDiag": "",
[2024-05-20 23:00:48]  *** Listing of results directory ***
[2024-05-20 23:00:48] total 924568
[2024-05-20 23:00:48] -rw-r--r-- 1 boinc boinc    467845 May 18 01:54 pilot3.tar.gz
[2024-05-20 23:00:48] -rw-r--r-- 1 boinc boinc      5633 May 18 02:39 queuedata.json
[2024-05-20 23:00:48] -rwx------ 1 boinc boinc     32251 May 18 02:39 runpilot2-wrapper.sh
[2024-05-20 23:00:48] -rw-r--r-- 1 boinc boinc       100 May 20 18:12 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-20 23:00:48] -rwxr-xr-x 1 boinc boinc      7986 May 20 18:12 run_atlas
[2024-05-20 23:00:48] -rw-r--r-- 1 boinc boinc       105 May 20 18:12 job.xml
[2024-05-20 23:00:48] -rw-r--r-- 1 boinc boinc      6457 May 20 18:12 init_data.xml
[2024-05-20 23:00:48] -rw-r--r-- 2 boinc boinc 633553880 May 20 18:12 EVNT.38776160._000140.pool.root.1
[2024-05-20 23:00:48] -rw-r--r-- 2 boinc boinc     17537 May 20 18:12 start_atlas.sh
[2024-05-20 23:00:48] drwxrwx--x 2 boinc boinc      4096 May 20 18:12 shared
[2024-05-20 23:00:48] -rw-r--r-- 2 boinc boinc    480007 May 20 18:12 input.tar.gz
[2024-05-20 23:00:48] -rw-r--r-- 1 boinc boinc         0 May 20 18:12 boinc_lockfile
[2024-05-20 23:00:48] -rw-r--r-- 1 boinc boinc      2626 May 20 18:12 pandaJob.out
[2024-05-20 23:00:48] -rw------- 1 boinc boinc       424 May 20 18:12 setup.sh.local
[2024-05-20 23:00:48] -rw------- 1 boinc boinc   1013977 May 20 18:12 agis_schedconf.cvmfs.json
[2024-05-20 23:00:48] -rw------- 1 boinc boinc   1324701 May 20 18:12 cric_ddmendpoints.json
[2024-05-20 23:00:48] drwx------ 4 boinc boinc      4096 May 20 18:12 pilot3
[2024-05-20 23:00:48] -rw------- 1 boinc boinc 305040436 May 20 22:59 HITS.38920982._003614.pool.root.1
[2024-05-20 23:00:48] -rw-r--r-- 1 boinc boinc       532 May 20 23:00 boinc_task_state.xml
[2024-05-20 23:00:48] -rw------- 1 boinc boinc      1050 May 20 23:00 memory_monitor_summary.json
[2024-05-20 23:00:48] -rw------- 1 boinc boinc         0 May 20 23:00 agis_ddmendpoints.agis.ALL.json
[2024-05-20 23:00:48] -rw------- 1 boinc boinc    385209 May 20 23:00 log.38920982._003614.job.log.tgz.1
[2024-05-20 23:00:48] -rw------- 1 boinc boinc      7769 May 20 23:00 heartbeat.json
[2024-05-20 23:00:48] -rw------- 1 boinc boinc        95 May 20 23:00 pilot_heartbeat.json
[2024-05-20 23:00:48] -rw-r--r-- 1 boinc boinc        28 May 20 23:00 wrapper_checkpoint.txt
[2024-05-20 23:00:48] -rw-r--r-- 1 boinc boinc      8192 May 20 23:00 boinc_mmap_file
[2024-05-20 23:00:48] -rw------- 1 boinc boinc      4417 May 20 23:00 pilotlog.txt
[2024-05-20 23:00:48] -rw------- 1 boinc boinc   1929910 May 20 23:00 log.38920982._003614.job.log.1
[2024-05-20 23:00:48] -rw------- 1 boinc boinc       357 May 20 23:00 output.list
[2024-05-20 23:00:48] -rw-r--r-- 1 boinc boinc       620 May 20 23:00 runtime_log
[2024-05-20 23:00:48] -rw------- 1 boinc boinc   2334720 May 20 23:00 result.tar.gz
[2024-05-20 23:00:48] -rw-r--r-- 1 boinc boinc     11410 May 20 23:00 runtime_log.err
[2024-05-20 23:00:48] -rw------- 1 boinc boinc       659 May 20 23:00 lJyNDmjHNS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmAmRKDmIjwAzm.diag
[2024-05-20 23:00:48] -rw-r--r-- 1 boinc boinc     21324 May 20 23:00 stderr.txt
[2024-05-20 23:00:48] HITS file was successfully produced:
[2024-05-20 23:00:48] -rw------- 1 boinc boinc 305040436 May 20 22:59 shared/HITS.pool.root.1
[2024-05-20 23:00:48]  *** Contents of shared directory: ***
[2024-05-20 23:00:48] total 919380
[2024-05-20 23:00:48] -rw-r--r-- 2 boinc boinc 633553880 May 20 18:12 ATLAS.root_0
[2024-05-20 23:00:48] -rw-r--r-- 2 boinc boinc     17537 May 20 18:12 start_atlas.sh
[2024-05-20 23:00:48] -rw-r--r-- 2 boinc boinc    480007 May 20 18:12 input.tar.gz
[2024-05-20 23:00:48] -rw------- 1 boinc boinc 305040436 May 20 22:59 HITS.pool.root.1
[2024-05-20 23:00:48] -rw------- 1 boinc boinc   2334720 May 20 23:00 result.tar.gz
23:00:49 (2378810): run_atlas exited; CPU time 64777.724464
23:00:49 (2378810): called boinc_finish(0)

</stderr_txt>
]]>

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