Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:32:41 (3768065): wrapper (7.7.26015): starting
12:32:41 (3768065): wrapper: running run_atlas (--nthreads 4)
[2024-05-22 12:32:41] Arguments: --nthreads 4
[2024-05-22 12:32:41] Threads: 4
[2024-05-22 12:32:41] Checking for CVMFS
[2024-05-22 12:32:41] No cvmfs_config command found, will try listing directly
[2024-05-22 12:32:42] CVMFS is ok
[2024-05-22 12:32:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-22 12:32:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-22 12:32:42] Further information can be found at the LHC@home message board.
[2024-05-22 12:32:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-22 12:32:42] Checking for apptainer binary...
[2024-05-22 12:32:42] which: no apptainer in ((null))
[2024-05-22 12:32:42] apptainer is not installed, using version from CVMFS
[2024-05-22 12:32:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-22 12:32:43] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2024-05-22 12:32:43] apptainer works
[2024-05-22 12:32:43] Set ATHENA_PROC_NUMBER=4
[2024-05-22 12:32:43] Set ATHENA_CORE_NUMBER=4
[2024-05-22 12:32:43] Starting ATLAS job with PandaID=6208377738
[2024-05-22 12:32:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-22 17:56:36]  *** The last 200 lines of the pilot log: ***
[2024-05-22 17:56:36] 2024-05-22 15:54:28,231 | INFO     | intersect: -22133660439.65614
[2024-05-22 17:56:36] 2024-05-22 15:54:28,231 | INFO     | chi2: 3.873558991229086
[2024-05-22 17:56:36] 2024-05-22 15:54:28,232 | INFO     | model: linear, x: [1716373994.0, 1716374055.0, 1716374116.0, 1716374177.0, 1716374238.0, 1716374299.0, 1716374360.0, 1716374421.0, 1716374482.0, 1716374543.0, 1716
[2024-05-22 17:56:36] 2024-05-22 15:54:28,232 | INFO     | sum of square deviations: 9327281860.0
[2024-05-22 17:56:36] 2024-05-22 15:54:28,233 | INFO     | sum of deviations: 123807652710.99998
[2024-05-22 17:56:36] 2024-05-22 15:54:28,233 | INFO     | mean x: 1716383449.0
[2024-05-22 17:56:36] 2024-05-22 15:54:28,234 | INFO     | mean y: 2316232.003215434
[2024-05-22 17:56:36] 2024-05-22 15:54:28,234 | INFO     | -- intersect: -22780463270.35229
[2024-05-22 17:56:36] 2024-05-22 15:54:28,234 | INFO     | intersect: -22780463270.35229
[2024-05-22 17:56:36] 2024-05-22 15:54:28,234 | INFO     | chi2: 3.875183311440493
[2024-05-22 17:56:36] 2024-05-22 15:54:28,234 | INFO     | current chi2=3.875183311440493 (change=-0.04193353489866017 %)
[2024-05-22 17:56:36] 2024-05-22 15:54:28,234 | INFO     | right removable region: 310
[2024-05-22 17:56:36] 2024-05-22 15:54:28,234 | INFO     | model: linear, x: [1716374299.0, 1716374360.0, 1716374421.0, 1716374482.0, 1716374543.0, 1716374604.0, 1716374665.0, 1716374726.0, 1716374787.0, 1716374848.0, 1716
[2024-05-22 17:56:36] 2024-05-22 15:54:28,234 | INFO     | sum of square deviations: 9327281860.0
[2024-05-22 17:56:36] 2024-05-22 15:54:28,236 | INFO     | sum of deviations: 54010529659.0
[2024-05-22 17:56:36] 2024-05-22 15:54:28,236 | INFO     | mean x: 1716383754.0
[2024-05-22 17:56:36] 2024-05-22 15:54:28,236 | INFO     | mean y: 2341058.9485530546
[2024-05-22 17:56:36] 2024-05-22 15:54:28,236 | INFO     | -- intersect: -9936545429.428968
[2024-05-22 17:56:36] 2024-05-22 15:54:28,236 | INFO     | intersect: -9936545429.428968
[2024-05-22 17:56:36] 2024-05-22 15:54:28,237 | INFO     | chi2: 1.503600948443785
[2024-05-22 17:56:36] 2024-05-22 15:54:28,237 | INFO     | current chi2=1.503600948443785 (change=61.18295986072771 %)
[2024-05-22 17:56:36] 2024-05-22 15:54:28,237 | INFO     | model: linear, x: [1716374604.0, 1716374665.0, 1716374726.0, 1716374787.0, 1716374848.0, 1716374909.0, 1716374970.0, 1716375031.0, 1716375092.0, 1716375153.0, 1716
[2024-05-22 17:56:36] 2024-05-22 15:54:28,237 | INFO     | sum of square deviations: 8884603792.5
[2024-05-22 17:56:36] 2024-05-22 15:54:28,238 | INFO     | sum of deviations: -3733686536.000003
[2024-05-22 17:56:36] 2024-05-22 15:54:28,239 | INFO     | mean x: 1716383906.5
[2024-05-22 17:56:36] 2024-05-22 15:54:28,239 | INFO     | mean y: 2360951.8300653594
[2024-05-22 17:56:36] 2024-05-22 15:54:28,239 | INFO     | -- intersect: 723658111.7232128
[2024-05-22 17:56:36] 2024-05-22 15:54:28,239 | INFO     | intersect: 723658111.7232128
[2024-05-22 17:56:36] 2024-05-22 15:54:28,239 | INFO     | chi2: 0.11679108626469346
[2024-05-22 17:56:36] 2024-05-22 15:54:28,239 | INFO     | current chi2=0.11679108626469346 (change=92.2325743153081 %)
[2024-05-22 17:56:36] 2024-05-22 15:54:28,239 | INFO     | model: linear, x: [1716374909.0, 1716374970.0, 1716375031.0, 1716375092.0, 1716375153.0, 1716375214.0, 1716375275.0, 1716375336.0, 1716375397.0, 1716375458.0, 1716
[2024-05-22 17:56:36] 2024-05-22 15:54:28,239 | INFO     | sum of square deviations: 8456158550.0
[2024-05-22 17:56:36] 2024-05-22 15:54:28,241 | INFO     | sum of deviations: -12583412084.000006
[2024-05-22 17:56:36] 2024-05-22 15:54:28,241 | INFO     | mean x: 1716384059.0
[2024-05-22 17:56:36] 2024-05-22 15:54:28,241 | INFO     | mean y: 2364072.591362126
[2024-05-22 17:56:36] 2024-05-22 15:54:28,241 | INFO     | -- intersect: 2556475112.622131
[2024-05-22 17:56:36] 2024-05-22 15:54:28,241 | INFO     | intersect: 2556475112.622131
[2024-05-22 17:56:36] 2024-05-22 15:54:28,241 | INFO     | chi2: 0.044466601965907813
[2024-05-22 17:56:36] 2024-05-22 15:54:28,242 | INFO     | current chi2=0.044466601965907813 (change=61.92637350325742 %)
[2024-05-22 17:56:36] 2024-05-22 15:54:28,242 | INFO     | model: linear, x: [1716375214.0, 1716375275.0, 1716375336.0, 1716375397.0, 1716375458.0, 1716375519.0, 1716375580.0, 1716375641.0, 1716375702.0, 1716375763.0, 1716
[2024-05-22 17:56:36] 2024-05-22 15:54:28,242 | INFO     | sum of square deviations: 8041713570.0
[2024-05-22 17:56:36] 2024-05-22 15:54:28,243 | INFO     | sum of deviations: -9050392978.000004
[2024-05-22 17:56:36] 2024-05-22 15:54:28,243 | INFO     | mean x: 1716384211.5
[2024-05-22 17:56:36] 2024-05-22 15:54:28,243 | INFO     | mean y: 2362771.527027027
[2024-05-22 17:56:36] 2024-05-22 15:54:28,243 | INFO     | -- intersect: 1934034607.3979077
[2024-05-22 17:56:36] 2024-05-22 15:54:28,244 | INFO     | intersect: 1934034607.3979077
[2024-05-22 17:56:36] 2024-05-22 15:54:28,244 | INFO     | chi2: 0.04071435159590512
[2024-05-22 17:56:36] 2024-05-22 15:54:28,244 | INFO     | current chi2=0.04071435159590512 (change=8.438356438568242 %)
[2024-05-22 17:56:36] 2024-05-22 15:54:28,244 | INFO     | left removable region: 40
[2024-05-22 17:56:36] 2024-05-22 15:54:28,244 | INFO     | model: linear, x: [1716376434.0, 1716376495.0, 1716376556.0, 1716376617.0, 1716376678.0, 1716376739.0, 1716376800.0, 1716376861.0, 1716376922.0, 1716376983.0, 1716
[2024-05-22 17:56:36] 2024-05-22 15:54:28,244 | INFO     | sum of square deviations: 6103286527.5
[2024-05-22 17:56:36] 2024-05-22 15:54:28,246 | INFO     | sum of deviations: 6113221902.500001
[2024-05-22 17:56:36] 2024-05-22 15:54:28,246 | INFO     | mean x: 1716384638.5
[2024-05-22 17:56:36] 2024-05-22 15:54:28,246 | INFO     | mean y: 2356382.1814814815
[2024-05-22 17:56:36] 2024-05-22 15:54:28,246 | INFO     | -- intersect: -1716822312.4308937
[2024-05-22 17:56:36] 2024-05-22 15:54:28,246 | INFO     | intersect: -1716822312.4308937
[2024-05-22 17:56:36] 2024-05-22 15:54:28,246 | INFO     | chi2: 0.00018314746728442712
[2024-05-22 17:56:36] 2024-05-22 15:54:28,246 | INFO     | -- intersect: -1716822312.4308937
[2024-05-22 17:56:36] 2024-05-22 15:54:28,246 | INFO     | current memory leak: 1.00 B/s (using 270 data points, chi2=0.00)
[2024-05-22 17:56:36] 2024-05-22 15:54:28,247 | INFO     | ..............................
[2024-05-22 17:56:36] 2024-05-22 15:54:28,247 | INFO     | . Timing measurements:
[2024-05-22 17:56:36] 2024-05-22 15:54:28,247 | INFO     | . get job = 0 s
[2024-05-22 17:56:36] 2024-05-22 15:54:28,247 | INFO     | . initial setup = 1 s
[2024-05-22 17:56:36] 2024-05-22 15:54:28,247 | INFO     | . payload setup = 4 s
[2024-05-22 17:56:36] 2024-05-22 15:54:28,247 | INFO     | . stage-in = 0 s
[2024-05-22 17:56:36] 2024-05-22 15:54:28,247 | INFO     | . payload execution = 19266 s
[2024-05-22 17:56:36] 2024-05-22 15:54:28,247 | INFO     | . stage-out = 0 s
[2024-05-22 17:56:36] 2024-05-22 15:54:28,247 | INFO     | . log creation = 0 s
[2024-05-22 17:56:36] 2024-05-22 15:54:28,248 | INFO     | ..............................
[2024-05-22 17:56:36] 2024-05-22 15:54:28,305 | INFO     | 
[2024-05-22 17:56:36] 2024-05-22 15:54:28,306 | INFO     | job summary report
[2024-05-22 17:56:36] 2024-05-22 15:54:28,306 | INFO     | --------------------------------------------------
[2024-05-22 17:56:36] 2024-05-22 15:54:28,306 | INFO     | PanDA job id: 6208377738
[2024-05-22 17:56:36] 2024-05-22 15:54:28,306 | INFO     | task id: 38776146
[2024-05-22 17:56:36] 2024-05-22 15:54:28,306 | INFO     | errors: (none)
[2024-05-22 17:56:36] 2024-05-22 15:54:28,306 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-22 17:56:36] 2024-05-22 15:54:28,306 | INFO     | pilot state: finished 
[2024-05-22 17:56:36] 2024-05-22 15:54:28,307 | INFO     | transexitcode: 0
[2024-05-22 17:56:36] 2024-05-22 15:54:28,307 | INFO     | exeerrorcode: 0
[2024-05-22 17:56:36] 2024-05-22 15:54:28,307 | INFO     | exeerrordiag: 
[2024-05-22 17:56:36] 2024-05-22 15:54:28,307 | INFO     | exitcode: 0
[2024-05-22 17:56:36] 2024-05-22 15:54:28,307 | INFO     | exitmsg: OK
[2024-05-22 17:56:36] 2024-05-22 15:54:28,307 | INFO     | cpuconsumptiontime: 73670 s
[2024-05-22 17:56:36] 2024-05-22 15:54:28,307 | INFO     | nevents: 400
[2024-05-22 17:56:36] 2024-05-22 15:54:28,307 | INFO     | neventsw: 0
[2024-05-22 17:56:36] 2024-05-22 15:54:28,307 | INFO     | pid: 3787973
[2024-05-22 17:56:36] 2024-05-22 15:54:28,308 | INFO     | pgrp: 3787973
[2024-05-22 17:56:36] 2024-05-22 15:54:28,308 | INFO     | corecount: 4
[2024-05-22 17:56:36] 2024-05-22 15:54:28,308 | INFO     | event service: False
[2024-05-22 17:56:36] 2024-05-22 15:54:28,308 | INFO     | sizes: {0: 2392122, 1: 2392264, 4: 2392470, 11: 2392498, 19274: 2425400, 19276: 2434566, 19282: 2434680}
[2024-05-22 17:56:36] 2024-05-22 15:54:28,308 | INFO     | --------------------------------------------------
[2024-05-22 17:56:36] 2024-05-22 15:54:28,308 | INFO     | 
[2024-05-22 17:56:36] 2024-05-22 15:54:28,308 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2024-05-22 17:56:36] 2024-05-22 15:54:28,325 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-22 17:56:36] 2024-05-22 15:54:28,325 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-22 17:56:36] 2024-05-22 15:54:28,325 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-22 17:56:36] 2024-05-22 15:54:28,325 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-22 17:56:36] 2024-05-22 15:54:28,325 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-22 17:56:36] 2024-05-22 15:54:28,325 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-22 17:56:36] 2024-05-22 15:54:28,326 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-22 17:56:36] 2024-05-22 15:54:28,326 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-22 17:56:36] 2024-05-22 15:54:28,326 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-22 17:56:36] 2024-05-22 15:54:28,326 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-22 17:56:36] 2024-05-22 15:54:28,326 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-22 17:56:36] 2024-05-22 15:54:28,326 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-22 17:56:36] 2024-05-22 15:54:28,326 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-22 17:56:36] 2024-05-22 15:54:28,326 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-22 17:56:36] 2024-05-22 15:54:28,326 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-22 17:56:36] 2024-05-22 15:54:28,326 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-22 17:56:36] 2024-05-22 15:54:28,326 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-22 17:56:36] 2024-05-22 15:54:28,326 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-22 17:56:36] 2024-05-22 15:54:28,326 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-22 17:56:36] 2024-05-22 15:54:28,326 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-22 17:56:36] 2024-05-22 15:54:28,327 | INFO     | job 6208377738 has completed (purged errors)
[2024-05-22 17:56:36] 2024-05-22 15:54:28,327 | INFO     | overall cleanup function is called
[2024-05-22 17:56:36] 2024-05-22 15:54:29,333 | INFO     | --- collectZombieJob: --- 10, [3787973]
[2024-05-22 17:56:36] 2024-05-22 15:54:29,333 | INFO     | zombie collector waiting for pid 3787973
[2024-05-22 17:56:36] 2024-05-22 15:54:29,333 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-22 17:56:36] 2024-05-22 15:54:30,338 | INFO     | collected zombie processes
[2024-05-22 17:56:36] 2024-05-22 15:54:30,338 | INFO     | will now attempt to kill all subprocesses of pid=3787973
[2024-05-22 17:56:36] 2024-05-22 15:54:30,470 | INFO     | process IDs to be killed: [3787973] (in reverse order)
[2024-05-22 17:56:36] 2024-05-22 15:54:30,559 | WARNING  | found no corresponding commands to process id(s)
[2024-05-22 17:56:36] 2024-05-22 15:54:30,560 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-22 17:56:36] 2024-05-22 15:54:30,565 | INFO     | did not find any defunct processes belonging to 3787973
[2024-05-22 17:56:36] 2024-05-22 15:54:30,571 | INFO     | did not find any defunct processes belonging to 3787973
[2024-05-22 17:56:36] 2024-05-22 15:54:30,571 | INFO     | ready for new job
[2024-05-22 17:56:36] 2024-05-22 15:54:30,571 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-22 17:56:36] 2024-05-22 15:54:30,573 | INFO     | *************************************
[2024-05-22 17:56:36] 2024-05-22 15:54:30,573 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-22 17:56:36] 2024-05-22 15:54:30,573 | INFO     | *************************************
[2024-05-22 17:56:36] 2024-05-22 15:54:30,573 | INFO     | 
[2024-05-22 17:56:36] 2024-05-22 15:54:30,574 | INFO     | architecture information:
[2024-05-22 17:56:36] 2024-05-22 15:54:30,575 | INFO     | executing command: cat /etc/os-release
[2024-05-22 17:56:36] 2024-05-22 15:54:30,586 | INFO     | cat /etc/os-release:
[2024-05-22 17:56:36] NAME="CentOS Linux"
[2024-05-22 17:56:36] VERSION="7 (Core)"
[2024-05-22 17:56:36] ID="centos"
[2024-05-22 17:56:36] ID_LIKE="rhel fedora"
[2024-05-22 17:56:36] VERSION_ID="7"
[2024-05-22 17:56:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-22 17:56:36] ANSI_COLOR="0;31"
[2024-05-22 17:56:36] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-22 17:56:36] HOME_URL="https://www.centos.org/"
[2024-05-22 17:56:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-22 17:56:36] 
[2024-05-22 17:56:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-22 17:56:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-22 17:56:36] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-22 17:56:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-22 17:56:36] 
[2024-05-22 17:56:36] 2024-05-22 15:54:30,586 | INFO     | *************************************
[2024-05-22 17:56:36] 2024-05-22 15:54:31,088 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2024-05-22 17:56:36] 2024-05-22 15:54:31,105 | INFO     | sufficient remaining disk space (1614970617856 B)
[2024-05-22 17:56:36] 2024-05-22 15:54:31,105 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-22 17:56:36] 2024-05-22 15:54:31,105 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-22 17:56:36] 2024-05-22 15:54:31,106 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-22 17:56:36] 2024-05-22 15:54:31,494 | INFO     | found 0 job(s) in 20 queues
[2024-05-22 17:56:36] 2024-05-22 15:54:31,494 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-22 17:56:36] 2024-05-22 15:54:31,495 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-22 17:56:36] 2024-05-22 15:54:31,625 | INFO     | all payload control threads have been joined
[2024-05-22 17:56:36] 2024-05-22 15:54:31,682 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-22 17:56:36] 2024-05-22 15:54:31,683 | INFO     | aborting loop
[2024-05-22 17:56:36] 2024-05-22 15:54:31,943 | INFO     | all data control threads have been joined
[2024-05-22 17:56:36] 2024-05-22 15:54:32,108 | INFO     | [job] retrieve thread has finished
[2024-05-22 17:56:36] 2024-05-22 15:54:32,178 | INFO     | [payload] validate_pre thread has finished
[2024-05-22 17:56:36] 2024-05-22 15:54:32,217 | INFO     | [job] validate thread has finished
[2024-05-22 17:56:36] 2024-05-22 15:54:32,251 | INFO     | [job] create_data_payload thread has finished
[2024-05-22 17:56:36] 2024-05-22 15:54:32,308 | INFO     | [payload] execute_payloads thread has finished
[2024-05-22 17:56:36] 2024-05-22 15:54:32,330 | INFO     | all job control threads have been joined
[2024-05-22 17:56:36] 2024-05-22 15:54:32,343 | INFO     | [data] copytool_in thread has finished
[2024-05-22 17:56:36] 2024-05-22 15:54:32,630 | INFO     | [payload] control thread has finished
[2024-05-22 17:56:36] 2024-05-22 15:54:32,687 | INFO     | [job] job monitor thread has finished
[2024-05-22 17:56:36] 2024-05-22 15:54:32,948 | INFO     | [data] control thread has finished
[2024-05-22 17:56:36] 2024-05-22 15:54:33,024 | INFO     | [payload] failed_post thread has finished
[2024-05-22 17:56:36] 2024-05-22 15:54:33,055 | INFO     | [payload] validate_post thread has finished
[2024-05-22 17:56:36] 2024-05-22 15:54:33,111 | INFO     | [data] copytool_out thread has finished
[2024-05-22 17:56:36] 2024-05-22 15:54:33,315 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-22 17:56:36] 2024-05-22 15:54:33,335 | INFO     | [job] control thread has finished
[2024-05-22 17:56:36] 2024-05-22 15:54:33,564 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-22 17:56:36] 2024-05-22 15:54:34,320 | INFO     | [job] queue monitor thread has finished
[2024-05-22 17:56:36] 2024-05-22 15:54:37,569 | INFO     | [data] queue_monitor thread has finished
[2024-05-22 17:56:36] 2024-05-22 15:54:41,614 | INFO     | job.realtimelogging is not enabled
[2024-05-22 17:56:36] 2024-05-22 15:54:42,619 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-22 17:56:36] 2024-05-22 15:54:42,897 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 46936986911808)>', '<ExcThread(monitor, started 46937296365312)>']
[2024-05-22 17:56:36] 2024-05-22 15:54:43,551 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-22 17:56:36] 2024-05-22 15:54:43,551 | INFO     | [monitor] control thread has ended
[2024-05-22 17:56:36] 2024-05-22 15:54:47,922 | INFO     | all workflow threads have been joined
[2024-05-22 17:56:36] 2024-05-22 15:54:47,922 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-22 17:56:36] 2024-05-22 15:54:47,922 | INFO     | traces error code: 0
[2024-05-22 17:56:36] 2024-05-22 15:54:47,923 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-22 17:56:36] 2024-05-22 15:54:48,009 [wrapper] ==== pilot stdout END ====
[2024-05-22 17:56:36] 2024-05-22 15:54:48,011 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-22 17:56:36] 2024-05-22 15:54:48,013 [wrapper] pilotpid: 3773443
[2024-05-22 17:56:36] 2024-05-22 15:54:48,015 [wrapper] Pilot exit status: 0
[2024-05-22 17:56:36] 2024-05-22 15:54:48,022 [wrapper] pandaids: 6208377738
[2024-05-22 17:56:36] 2024-05-22 15:54:48,072 [wrapper] cleanup: SIGTERM to supervisor_pilot 4038652 3773444
[2024-05-22 17:56:36] 2024-05-22 15:54:48,074 [wrapper] Test setup, not cleaning
[2024-05-22 17:56:36] 2024-05-22 15:54:48,075 [wrapper] ==== wrapper stdout END ====
[2024-05-22 17:56:36] 2024-05-22 15:54:48,077 [wrapper] ==== wrapper stderr END ====
[2024-05-22 17:56:36] 2024-05-22 15:54:48,081 [wrapper] apfmon messages muted
[2024-05-22 17:56:36]  *** Error codes and diagnostics ***
[2024-05-22 17:56:36]     "exeErrorCode": 0,
[2024-05-22 17:56:36]     "exeErrorDiag": "",
[2024-05-22 17:56:36]     "pilotErrorCode": 0,
[2024-05-22 17:56:36]     "pilotErrorDiag": "",
[2024-05-22 17:56:36]  *** Listing of results directory ***
[2024-05-22 17:56:36] total 879556
[2024-05-22 17:56:36] -rw-r--r-- 1 boinc boinc    467845 May 18 01:54 pilot3.tar.gz
[2024-05-22 17:56:36] -rwx------ 1 boinc boinc     32251 May 18 02:08 runpilot2-wrapper.sh
[2024-05-22 17:56:36] -rw-r--r-- 1 boinc boinc      5633 May 18 02:08 queuedata.json
[2024-05-22 17:56:36] -rw-r--r-- 1 boinc boinc       100 May 22 12:32 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-22 17:56:36] -rwxr-xr-x 1 boinc boinc      7986 May 22 12:32 run_atlas
[2024-05-22 17:56:36] -rw-r--r-- 1 boinc boinc       105 May 22 12:32 job.xml
[2024-05-22 17:56:36] -rw-r--r-- 1 boinc boinc      6457 May 22 12:32 init_data.xml
[2024-05-22 17:56:36] -rw-r--r-- 2 boinc boinc 614122399 May 22 12:32 EVNT.38776140._000205.pool.root.1
[2024-05-22 17:56:36] -rw-r--r-- 2 boinc boinc    479994 May 22 12:32 input.tar.gz
[2024-05-22 17:56:36] drwxrwx--x 2 boinc boinc      4096 May 22 12:32 shared
[2024-05-22 17:56:36] -rw-r--r-- 2 boinc boinc     17537 May 22 12:32 start_atlas.sh
[2024-05-22 17:56:36] -rw-r--r-- 1 boinc boinc         0 May 22 12:32 boinc_lockfile
[2024-05-22 17:56:36] -rw-r--r-- 1 boinc boinc      2614 May 22 12:32 pandaJob.out
[2024-05-22 17:56:36] -rw------- 1 boinc boinc       424 May 22 12:32 setup.sh.local
[2024-05-22 17:56:36] -rw------- 1 boinc boinc   1010787 May 22 12:32 agis_schedconf.cvmfs.json
[2024-05-22 17:56:36] -rw------- 1 boinc boinc   1324700 May 22 12:32 cric_ddmendpoints.json
[2024-05-22 17:56:36] drwx------ 4 boinc boinc      4096 May 22 12:32 pilot3
[2024-05-22 17:56:36] -rw------- 1 boinc boinc 278017618 May 22 17:53 HITS.38776146._015673.pool.root.1
[2024-05-22 17:56:36] -rw-r--r-- 1 boinc boinc       528 May 22 17:53 boinc_task_state.xml
[2024-05-22 17:56:36] -rw------- 1 boinc boinc        95 May 22 17:54 pilot_heartbeat.json
[2024-05-22 17:56:36] -rw------- 1 boinc boinc      1046 May 22 17:54 memory_monitor_summary.json
[2024-05-22 17:56:36] -rw------- 1 boinc boinc         0 May 22 17:54 agis_ddmendpoints.agis.ALL.json
[2024-05-22 17:56:36] -rw------- 1 boinc boinc    413291 May 22 17:54 log.38776146._015673.job.log.tgz.1
[2024-05-22 17:56:36] -rw------- 1 boinc boinc      7769 May 22 17:54 heartbeat.json
[2024-05-22 17:56:36] -rw------- 1 boinc boinc      4294 May 22 17:54 pilotlog.txt
[2024-05-22 17:56:36] -rw------- 1 boinc boinc   2088184 May 22 17:54 log.38776146._015673.job.log.1
[2024-05-22 17:56:36] -rw------- 1 boinc boinc       357 May 22 17:54 output.list
[2024-05-22 17:56:36] -rw-r--r-- 1 boinc boinc       620 May 22 17:54 runtime_log
[2024-05-22 17:56:36] -rw------- 1 boinc boinc   2519040 May 22 17:54 result.tar.gz
[2024-05-22 17:56:36] -rw-r--r-- 1 boinc boinc     11410 May 22 17:54 runtime_log.err
[2024-05-22 17:56:36] -rw------- 1 boinc boinc       660 May 22 17:54 MvENDmPnMS5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmIaLKDmA18hsn.diag
[2024-05-22 17:56:36] -rw-r--r-- 1 boinc boinc        26 May 22 17:56 wrapper_checkpoint.txt
[2024-05-22 17:56:36] -rw-r--r-- 1 boinc boinc      8192 May 22 17:56 boinc_mmap_file
[2024-05-22 17:56:36] -rw-r--r-- 1 boinc boinc     21299 May 22 17:56 stderr.txt
[2024-05-22 17:56:36] HITS file was successfully produced:
[2024-05-22 17:56:36] -rw------- 1 boinc boinc 278017618 May 22 17:53 shared/HITS.pool.root.1
[2024-05-22 17:56:36]  *** Contents of shared directory: ***
[2024-05-22 17:56:36] total 874196
[2024-05-22 17:56:36] -rw-r--r-- 2 boinc boinc 614122399 May 22 12:32 ATLAS.root_0
[2024-05-22 17:56:36] -rw-r--r-- 2 boinc boinc    479994 May 22 12:32 input.tar.gz
[2024-05-22 17:56:36] -rw-r--r-- 2 boinc boinc     17537 May 22 12:32 start_atlas.sh
[2024-05-22 17:56:36] -rw------- 1 boinc boinc 278017618 May 22 17:53 HITS.pool.root.1
[2024-05-22 17:56:36] -rw------- 1 boinc boinc   2519040 May 22 17:54 result.tar.gz
17:56:38 (3768065): run_atlas exited; CPU time 73337.078594
17:56:38 (3768065): called boinc_finish(0)

</stderr_txt>
]]>

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