Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:11:13 (155087): wrapper (7.7.26015): starting
22:11:13 (155087): wrapper: running run_atlas (--nthreads 8)
[2024-05-17 22:11:13] Arguments: --nthreads 8
[2024-05-17 22:11:13] Threads: 8
[2024-05-17 22:11:13] Checking for CVMFS
[2024-05-17 22:11:14] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 22:11:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 22:11:14] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 22:11:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 22:11:15] 2.11.2.0 159478 8737 107880 132862 2 298 15789062 18432000 12448 130560 0 43571995 98.831 98923656 40143 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2024-05-17 22:11:15] CVMFS is ok
[2024-05-17 22:11:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 22:11:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 22:11:15] Further information can be found at the LHC@home message board.
[2024-05-17 22:11:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 22:11:15] Checking for apptainer binary...
[2024-05-17 22:11:15] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 22:11:15] Running /usr/bin/apptainer --version
[2024-05-17 22:11:15] apptainer version 1.3.0-1.el7
[2024-05-17 22:11:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 22:11:30] c6-4-5-2.aglt2.org
[2024-05-17 22:11:30] apptainer works
[2024-05-17 22:11:30] Set ATHENA_PROC_NUMBER=8
[2024-05-17 22:11:30] Set ATHENA_CORE_NUMBER=8
[2024-05-17 22:11:30] Starting ATLAS job with PandaID=6208376750
[2024-05-17 22:11:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 07:37:21]  *** The last 200 lines of the pilot log: ***
[2024-05-19 07:37:21] 2024-05-19 11:36:46,720 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-19 07:37:21] 2024-05-19 11:36:46,774 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-19 07:37:21] 2024-05-19 11:36:48,833 | INFO     | monitor loop #7856: job 0:6208376750 is in state 'finished'
[2024-05-19 07:37:21] 2024-05-19 11:36:48,834 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-19 07:37:21] 2024-05-19 11:36:51,339 | INFO     | monitor loop #7857: job 0:6208376750 is in state 'finished'
[2024-05-19 07:37:21] 2024-05-19 11:36:51,340 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-19 07:37:21] 2024-05-19 11:36:53,846 | INFO     | monitor loop #7858: job 0:6208376750 is in state 'finished'
[2024-05-19 07:37:21] 2024-05-19 11:36:53,847 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-19 07:37:21] 2024-05-19 11:36:56,351 | INFO     | monitor loop #7859: job 0:6208376750 is in state 'finished'
[2024-05-19 07:37:21] 2024-05-19 11:36:56,352 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-19 07:37:21] 2024-05-19 11:36:58,856 | INFO     | monitor loop #7860: job 0:6208376750 is in state 'finished'
[2024-05-19 07:37:21] 2024-05-19 11:36:58,857 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-19 07:37:21] 2024-05-19 11:37:01,364 | INFO     | monitor loop #7861: job 0:6208376750 is in state 'finished'
[2024-05-19 07:37:21] 2024-05-19 11:37:01,364 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-19 07:37:21] 2024-05-19 11:37:01,814 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-19 07:37:21] 2024-05-19 11:37:01,815 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6208376750/memory_monitor_summary.json (trf name=prmon)
[2024-05-19 07:37:21] 2024-05-19 11:37:01,815 | INFO     | extracted standard info from prmon json
[2024-05-19 07:37:21] 2024-05-19 11:37:01,815 | INFO     | extracted standard memory fields from prmon json
[2024-05-19 07:37:21] 2024-05-19 11:37:01,815 | WARNING  | GPU info not found in prmon json
[2024-05-19 07:37:21] 2024-05-19 11:37:01,843 | INFO     | fitting pss+swap vs Time
[2024-05-19 07:37:21] 2024-05-19 11:37:01,845 | INFO     | model: linear, x: [1715998855.0, 1715998916.0, 1715998977.0, 1715999038.0, 1715999099.0, 1715999160.0, 1715999221.0, 1715999282.0, 1715999343.0, 1715999404.0, 1715
[2024-05-19 07:37:21] 2024-05-19 11:37:01,846 | INFO     | sum of square deviations: 2345582007326.308
[2024-05-19 07:37:21] 2024-05-19 11:37:01,912 | INFO     | sum of deviations: 17527078709473.467
[2024-05-19 07:37:21] 2024-05-19 11:37:01,912 | INFO     | mean x: 1716058698.515028
[2024-05-19 07:37:21] 2024-05-19 11:37:01,913 | INFO     | mean y: 3366487.611818645
[2024-05-19 07:37:21] 2024-05-19 11:37:01,913 | INFO     | -- intersect: -12819675207.372173
[2024-05-19 07:37:21] 2024-05-19 11:37:01,913 | INFO     | intersect: -12819675207.372173
[2024-05-19 07:37:21] 2024-05-19 11:37:01,915 | INFO     | chi2: 70.84637344834161
[2024-05-19 07:37:21] 2024-05-19 11:37:01,916 | INFO     | model: linear, x: [1715998855.0, 1715998916.0, 1715998977.0, 1715999038.0, 1715999099.0, 1715999160.0, 1715999221.0, 1715999282.0, 1715999343.0, 1715999404.0, 1715
[2024-05-19 07:37:21] 2024-05-19 11:37:01,917 | INFO     | sum of square deviations: 2327706145327.099
[2024-05-19 07:37:21] 2024-05-19 11:37:01,987 | INFO     | sum of deviations: 18283830284086.03
[2024-05-19 07:37:21] 2024-05-19 11:37:01,987 | INFO     | mean x: 1716058546.0214505
[2024-05-19 07:37:21] 2024-05-19 11:37:01,988 | INFO     | mean y: 3372943.2609805926
[2024-05-19 07:37:21] 2024-05-19 11:37:01,988 | INFO     | -- intersect: -13476044669.653614
[2024-05-19 07:37:21] 2024-05-19 11:37:01,988 | INFO     | intersect: -13476044669.653614
[2024-05-19 07:37:21] 2024-05-19 11:37:01,989 | INFO     | chi2: 67.72062996729053
[2024-05-19 07:37:21] 2024-05-19 11:37:01,990 | INFO     | current chi2=67.72062996729053 (change=4.4120020953934125 %)
[2024-05-19 07:37:21] 2024-05-19 11:37:01,990 | INFO     | right removable region: 1957
[2024-05-19 07:37:21] 2024-05-19 11:37:01,991 | INFO     | model: linear, x: [1715999160.0, 1715999221.0, 1715999282.0, 1715999343.0, 1715999404.0, 1715999465.0, 1715999526.0, 1715999587.0, 1715999648.0, 1715999709.0, 1715
[2024-05-19 07:37:21] 2024-05-19 11:37:01,992 | INFO     | sum of square deviations: 2327703133757.094
[2024-05-19 07:37:21] 2024-05-19 11:37:02,065 | INFO     | sum of deviations: 16588929403410.598
[2024-05-19 07:37:21] 2024-05-19 11:37:02,066 | INFO     | mean x: 1716058851.0214505
[2024-05-19 07:37:21] 2024-05-19 11:37:02,066 | INFO     | mean y: 3374489.153728294
[2024-05-19 07:37:21] 2024-05-19 11:37:02,066 | INFO     | -- intersect: -12226526617.583992
[2024-05-19 07:37:21] 2024-05-19 11:37:02,066 | INFO     | intersect: -12226526617.583992
[2024-05-19 07:37:21] 2024-05-19 11:37:02,068 | INFO     | chi2: 66.10499130447258
[2024-05-19 07:37:21] 2024-05-19 11:37:02,068 | INFO     | current chi2=66.10499130447258 (change=6.692483910028593 %)
[2024-05-19 07:37:21] 2024-05-19 11:37:02,068 | INFO     | left removable region: 10
[2024-05-19 07:37:21] 2024-05-19 11:37:02,070 | INFO     | model: linear, x: [1715999465.0, 1715999526.0, 1715999587.0, 1715999648.0, 1715999709.0, 1715999770.0, 1715999831.0, 1715999892.0, 1715999953.0, 1716000014.0, 1716
[2024-05-19 07:37:21] 2024-05-19 11:37:02,071 | INFO     | sum of square deviations: 2288693469932.272
[2024-05-19 07:37:21] 2024-05-19 11:37:02,151 | INFO     | sum of deviations: 16716183240340.654
[2024-05-19 07:37:21] 2024-05-19 11:37:02,151 | INFO     | mean x: 1716058820.535696
[2024-05-19 07:37:21] 2024-05-19 11:37:02,151 | INFO     | mean y: 3389105.322547509
[2024-05-19 07:37:21] 2024-05-19 11:37:02,151 | INFO     | -- intersect: -12530379209.281172
[2024-05-19 07:37:21] 2024-05-19 11:37:02,151 | INFO     | intersect: -12530379209.281172
[2024-05-19 07:37:21] 2024-05-19 11:37:02,153 | INFO     | chi2: 59.149986961898094
[2024-05-19 07:37:21] 2024-05-19 11:37:02,153 | INFO     | -- intersect: -12530379209.281172
[2024-05-19 07:37:21] 2024-05-19 11:37:02,154 | INFO     | current memory leak: 7.30 B/s (using 1947 data points, chi2=59.15)
[2024-05-19 07:37:21] 2024-05-19 11:37:02,156 | INFO     | ..............................
[2024-05-19 07:37:21] 2024-05-19 11:37:02,156 | INFO     | . Timing measurements:
[2024-05-19 07:37:21] 2024-05-19 11:37:02,156 | INFO     | . get job = 0 s
[2024-05-19 07:37:21] 2024-05-19 11:37:02,156 | INFO     | . initial setup = 3 s
[2024-05-19 07:37:21] 2024-05-19 11:37:02,156 | INFO     | . payload setup = 260 s
[2024-05-19 07:37:21] 2024-05-19 11:37:02,156 | INFO     | . stage-in = 0 s
[2024-05-19 07:37:21] 2024-05-19 11:37:02,156 | INFO     | . payload execution = 119846 s
[2024-05-19 07:37:21] 2024-05-19 11:37:02,156 | INFO     | . stage-out = 4 s
[2024-05-19 07:37:21] 2024-05-19 11:37:02,156 | INFO     | . log creation = 1 s
[2024-05-19 07:37:21] 2024-05-19 11:37:02,156 | INFO     | ..............................
[2024-05-19 07:37:21] 2024-05-19 11:37:02,241 | INFO     | 
[2024-05-19 07:37:21] 2024-05-19 11:37:02,241 | INFO     | job summary report
[2024-05-19 07:37:21] 2024-05-19 11:37:02,241 | INFO     | --------------------------------------------------
[2024-05-19 07:37:21] 2024-05-19 11:37:02,242 | INFO     | PanDA job id: 6208376750
[2024-05-19 07:37:21] 2024-05-19 11:37:02,242 | INFO     | task id: 38734053
[2024-05-19 07:37:21] 2024-05-19 11:37:02,242 | INFO     | errors: (none)
[2024-05-19 07:37:21] 2024-05-19 11:37:02,242 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 07:37:21] 2024-05-19 11:37:02,242 | INFO     | pilot state: finished 
[2024-05-19 07:37:21] 2024-05-19 11:37:02,242 | INFO     | transexitcode: 0
[2024-05-19 07:37:21] 2024-05-19 11:37:02,242 | INFO     | exeerrorcode: 0
[2024-05-19 07:37:21] 2024-05-19 11:37:02,242 | INFO     | exeerrordiag: 
[2024-05-19 07:37:21] 2024-05-19 11:37:02,242 | INFO     | exitcode: 0
[2024-05-19 07:37:21] 2024-05-19 11:37:02,242 | INFO     | exitmsg: OK
[2024-05-19 07:37:21] 2024-05-19 11:37:02,242 | INFO     | cpuconsumptiontime: 279928 s
[2024-05-19 07:37:21] 2024-05-19 11:37:02,242 | INFO     | nevents: 1850
[2024-05-19 07:37:21] 2024-05-19 11:37:02,242 | INFO     | neventsw: 0
[2024-05-19 07:37:21] 2024-05-19 11:37:02,242 | INFO     | pid: 223238
[2024-05-19 07:37:21] 2024-05-19 11:37:02,242 | INFO     | pgrp: 223238
[2024-05-19 07:37:21] 2024-05-19 11:37:02,242 | INFO     | corecount: 8
[2024-05-19 07:37:21] 2024-05-19 11:37:02,243 | INFO     | event service: False
[2024-05-19 07:37:21] 2024-05-19 11:37:02,243 | INFO     | sizes: {0: 2392639, 1: 2392639, 12: 2392667, 23: 2392695, 33: 2392723, 42: 2392957, 45: 2393113, 120110: 2491852, 120111: 2491851, 120116: 2500923, 120133: 2501089
[2024-05-19 07:37:21] 2024-05-19 11:37:02,243 | INFO     | --------------------------------------------------
[2024-05-19 07:37:21] 2024-05-19 11:37:02,243 | INFO     | 
[2024-05-19 07:37:21] 2024-05-19 11:37:02,243 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2024-05-19 07:37:21] 2024-05-19 11:37:02,330 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 07:37:21] 2024-05-19 11:37:02,330 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 07:37:21] 2024-05-19 11:37:02,330 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 07:37:21] 2024-05-19 11:37:02,330 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 07:37:21] 2024-05-19 11:37:02,330 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 07:37:21] 2024-05-19 11:37:02,330 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 07:37:21] 2024-05-19 11:37:02,330 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 07:37:21] 2024-05-19 11:37:02,330 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 07:37:21] 2024-05-19 11:37:02,331 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 07:37:21] 2024-05-19 11:37:02,331 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 07:37:21] 2024-05-19 11:37:02,331 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 07:37:21] 2024-05-19 11:37:02,331 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 07:37:21] 2024-05-19 11:37:02,331 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 07:37:21] 2024-05-19 11:37:02,331 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 07:37:21] 2024-05-19 11:37:02,331 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 07:37:21] 2024-05-19 11:37:02,331 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 07:37:21] 2024-05-19 11:37:02,331 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 07:37:21] 2024-05-19 11:37:02,332 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 07:37:21] 2024-05-19 11:37:02,332 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 07:37:21] 2024-05-19 11:37:02,332 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 07:37:21] 2024-05-19 11:37:02,332 | INFO     | job 6208376750 has completed (purged errors)
[2024-05-19 07:37:21] 2024-05-19 11:37:02,332 | INFO     | overall cleanup function is called
[2024-05-19 07:37:21] 2024-05-19 11:37:03,347 | INFO     | --- collectZombieJob: --- 10, [223238]
[2024-05-19 07:37:21] 2024-05-19 11:37:03,347 | INFO     | zombie collector waiting for pid 223238
[2024-05-19 07:37:21] 2024-05-19 11:37:03,348 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 07:37:21] 2024-05-19 11:37:04,353 | INFO     | collected zombie processes
[2024-05-19 07:37:21] 2024-05-19 11:37:04,353 | INFO     | will now attempt to kill all subprocesses of pid=223238
[2024-05-19 07:37:21] 2024-05-19 11:37:05,133 | INFO     | process IDs to be killed: [223238] (in reverse order)
[2024-05-19 07:37:21] 2024-05-19 11:37:05,321 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 07:37:21] 2024-05-19 11:37:05,321 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 07:37:21] 2024-05-19 11:37:05,330 | INFO     | did not find any defunct processes belonging to 223238
[2024-05-19 07:37:21] 2024-05-19 11:37:05,339 | INFO     | did not find any defunct processes belonging to 223238
[2024-05-19 07:37:21] 2024-05-19 11:37:05,339 | INFO     | ready for new job
[2024-05-19 07:37:21] 2024-05-19 11:37:05,339 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 07:37:21] 2024-05-19 11:37:05,346 | INFO     | *************************************
[2024-05-19 07:37:21] 2024-05-19 11:37:05,346 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 07:37:21] 2024-05-19 11:37:05,346 | INFO     | *************************************
[2024-05-19 07:37:21] 2024-05-19 11:37:05,346 | INFO     | 
[2024-05-19 07:37:21] 2024-05-19 11:37:05,349 | INFO     | architecture information:
[2024-05-19 07:37:21] 2024-05-19 11:37:05,350 | INFO     | executing command: cat /etc/os-release
[2024-05-19 07:37:21] 2024-05-19 11:37:05,369 | INFO     | cat /etc/os-release:
[2024-05-19 07:37:21] NAME="CentOS Linux"
[2024-05-19 07:37:21] VERSION="7 (Core)"
[2024-05-19 07:37:21] ID="centos"
[2024-05-19 07:37:21] ID_LIKE="rhel fedora"
[2024-05-19 07:37:21] VERSION_ID="7"
[2024-05-19 07:37:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 07:37:21] ANSI_COLOR="0;31"
[2024-05-19 07:37:21] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 07:37:21] HOME_URL="https://www.centos.org/"
[2024-05-19 07:37:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 07:37:21] 
[2024-05-19 07:37:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 07:37:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 07:37:21] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 07:37:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 07:37:21] 
[2024-05-19 07:37:21] 2024-05-19 11:37:05,370 | INFO     | *************************************
[2024-05-19 07:37:21] 2024-05-19 11:37:05,873 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2024-05-19 07:37:21] 2024-05-19 11:37:06,109 | INFO     | sufficient remaining disk space (100701044736 B)
[2024-05-19 07:37:21] 2024-05-19 11:37:06,110 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 07:37:21] 2024-05-19 11:37:06,110 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 07:37:21] 2024-05-19 11:37:06,122 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 07:37:21] 2024-05-19 11:37:06,225 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 07:37:21] 2024-05-19 11:37:06,226 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 07:37:21] 2024-05-19 11:37:06,226 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 07:37:21] 2024-05-19 11:37:06,411 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-19 07:37:21] 2024-05-19 11:37:06,412 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-19 07:37:21] 2024-05-19 11:37:06,412 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 07:37:21] 2024-05-19 11:37:06,412 | INFO     | will abort loop
[2024-05-19 07:37:21] 2024-05-19 11:37:06,652 | INFO     | all data control threads have been joined
[2024-05-19 07:37:21] 2024-05-19 11:37:06,870 | INFO     | all job control threads have been joined
[2024-05-19 07:37:21] 2024-05-19 11:37:07,115 | INFO     | [job] retrieve thread has finished
[2024-05-19 07:37:21] 2024-05-19 11:37:07,152 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 07:37:21] 2024-05-19 11:37:07,234 | INFO     | all payload control threads have been joined
[2024-05-19 07:37:21] 2024-05-19 11:37:07,255 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 07:37:21] 2024-05-19 11:37:07,360 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 07:37:21] 2024-05-19 11:37:07,417 | INFO     | [job] job monitor thread has finished
[2024-05-19 07:37:21] 2024-05-19 11:37:07,658 | INFO     | [data] control thread has finished
[2024-05-19 07:37:21] 2024-05-19 11:37:07,786 | INFO     | [payload] failed_post thread has finished
[2024-05-19 07:37:21] 2024-05-19 11:37:07,790 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 07:37:21] 2024-05-19 11:37:07,876 | INFO     | [job] control thread has finished
[2024-05-19 07:37:21] 2024-05-19 11:37:07,915 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 07:37:21] 2024-05-19 11:37:08,020 | INFO     | [job] validate thread has finished
[2024-05-19 07:37:21] 2024-05-19 11:37:08,129 | INFO     | [data] copytool_out thread has finished
[2024-05-19 07:37:21] 2024-05-19 11:37:08,261 | INFO     | [job] queue monitor thread has finished
[2024-05-19 07:37:21] 2024-05-19 11:37:08,262 | INFO     | [payload] control thread has finished
[2024-05-19 07:37:21] 2024-05-19 11:37:08,411 | INFO     | [payload] validate_post thread has finished
[2024-05-19 07:37:21] 2024-05-19 11:37:08,418 | INFO     | [data] copytool_in thread has finished
[2024-05-19 07:37:21] 2024-05-19 11:37:09,356 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 07:37:21] 2024-05-19 11:37:13,364 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 07:37:21] 2024-05-19 11:37:15,111 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140090070849344)>', '<ExcThread(monitor, started 140089770350336)>']
[2024-05-19 07:37:21] 2024-05-19 11:37:15,279 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 07:37:21] 2024-05-19 11:37:15,280 | INFO     | [monitor] control thread has ended
[2024-05-19 07:37:21] 2024-05-19 11:37:20,137 | INFO     | all workflow threads have been joined
[2024-05-19 07:37:21] 2024-05-19 11:37:20,138 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 07:37:21] 2024-05-19 11:37:20,138 | INFO     | traces error code: 0
[2024-05-19 07:37:21] 2024-05-19 11:37:20,138 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 07:37:21] 2024-05-19 11:37:20,385 [wrapper] ==== pilot stdout END ====
[2024-05-19 07:37:21] 2024-05-19 11:37:20,422 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 07:37:21] 2024-05-19 11:37:20,460 [wrapper] pilotpid: 173621
[2024-05-19 07:37:21] 2024-05-19 11:37:20,502 [wrapper] Pilot exit status: 0
[2024-05-19 07:37:21] 2024-05-19 11:37:20,576 [wrapper] pandaids: 6208376750
[2024-05-19 07:37:21] 2024-05-19 11:37:20,645 [wrapper] cleanup: SIGTERM to supervisor_pilot 288251 173622
[2024-05-19 07:37:21] 2024-05-19 11:37:20,648 [wrapper] Test setup, not cleaning
[2024-05-19 07:37:21] 2024-05-19 11:37:20,655 [wrapper] ==== wrapper stdout END ====
[2024-05-19 07:37:21] 2024-05-19 11:37:20,657 [wrapper] ==== wrapper stderr END ====
[2024-05-19 07:37:21] 2024-05-19 11:37:20,666 [wrapper] apfmon messages muted
[2024-05-19 07:37:21]  *** Error codes and diagnostics ***
[2024-05-19 07:37:21]     "exeErrorCode": 0,
[2024-05-19 07:37:21]     "exeErrorDiag": "",
[2024-05-19 07:37:21]     "pilotErrorCode": 0,
[2024-05-19 07:37:21]     "pilotErrorDiag": "",
[2024-05-19 07:37:21]  *** Listing of results directory ***
[2024-05-19 07:37:21] total 1455036
[2024-05-19 07:37:21] -rw-r--r-- 1 boincer umatlas     467845 May 17 18:03 pilot3.tar.gz
[2024-05-19 07:37:21] -rwx------ 1 boincer umatlas      32251 May 17 18:07 runpilot2-wrapper.sh
[2024-05-19 07:37:21] -rw-r--r-- 1 boincer umatlas       5633 May 17 18:07 queuedata.json
[2024-05-19 07:37:21] -rw-r--r-- 1 boincer umatlas        100 May 17 22:11 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 07:37:21] -rwxr-xr-x 1 boincer umatlas       7986 May 17 22:11 run_atlas
[2024-05-19 07:37:21] -rw-r--r-- 1 boincer umatlas        105 May 17 22:11 job.xml
[2024-05-19 07:37:21] -rw-r--r-- 2 boincer umatlas  329468370 May 17 22:11 EVNT.38734051._000573.pool.root.1
[2024-05-19 07:37:21] -rw-r--r-- 2 boincer umatlas      17537 May 17 22:11 start_atlas.sh
[2024-05-19 07:37:21] drwxrwx--x 2 boincer umatlas       4096 May 17 22:11 shared
[2024-05-19 07:37:21] -rw-r--r-- 2 boincer umatlas     480166 May 17 22:11 input.tar.gz
[2024-05-19 07:37:21] -rw-r--r-- 1 boincer umatlas          0 May 17 22:11 boinc_lockfile
[2024-05-19 07:37:21] -rw-r--r-- 1 boincer umatlas       2852 May 17 22:11 pandaJob.out
[2024-05-19 07:37:21] -rw------- 1 boincer umatlas        467 May 17 22:11 setup.sh.local
[2024-05-19 07:37:21] -rw------- 1 boincer umatlas    1019073 May 17 22:13 agis_schedconf.cvmfs.json
[2024-05-19 07:37:21] -rw------- 1 boincer umatlas    1324701 May 17 22:13 cric_ddmendpoints.json
[2024-05-19 07:37:21] drwx------ 4 boincer umatlas       4096 May 17 22:13 pilot3
[2024-05-19 07:37:21] -rw-r--r-- 1 boincer umatlas        534 May 19 06:58 boinc_task_state.xml
[2024-05-19 07:37:21] -rw-r--r-- 1 boincer umatlas       6385 May 19 07:27 init_data.xml
[2024-05-19 07:37:21] -rw------- 1 boincer umatlas 1117000732 May 19 07:35 HITS.38734053._008317.pool.root.1
[2024-05-19 07:37:21] -rw------- 1 boincer umatlas       1086 May 19 07:36 memory_monitor_summary.json
[2024-05-19 07:37:21] -rw------- 1 boincer umatlas          0 May 19 07:36 agis_ddmendpoints.agis.ALL.json
[2024-05-19 07:37:21] -rw------- 1 boincer umatlas         95 May 19 07:36 pilot_heartbeat.json
[2024-05-19 07:37:21] -rw------- 1 boincer umatlas    3936106 May 19 07:36 log.38734053._008317.job.log.tgz.1
[2024-05-19 07:37:21] -rw------- 1 boincer umatlas      27736 May 19 07:37 heartbeat.json
[2024-05-19 07:37:21] -rw-r--r-- 1 boincer umatlas       8192 May 19 07:37 boinc_mmap_file
[2024-05-19 07:37:21] -rw-r--r-- 1 boincer umatlas         30 May 19 07:37 wrapper_checkpoint.txt
[2024-05-19 07:37:21] -rw------- 1 boincer umatlas       4398 May 19 07:37 pilotlog.txt
[2024-05-19 07:37:21] -rw------- 1 boincer umatlas   16019862 May 19 07:37 log.38734053._008317.job.log.1
[2024-05-19 07:37:21] -rw------- 1 boincer umatlas        353 May 19 07:37 output.list
[2024-05-19 07:37:21] -rw-r--r-- 1 boincer umatlas        620 May 19 07:37 runtime_log
[2024-05-19 07:37:21] -rw------- 1 boincer umatlas   19998720 May 19 07:37 result.tar.gz
[2024-05-19 07:37:21] -rw-r--r-- 1 boincer umatlas      11406 May 19 07:37 runtime_log.err
[2024-05-19 07:37:21] -rw------- 1 boincer umatlas        658 May 19 07:37 exTNDmGvKS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmccRKDm6HavAn.diag
[2024-05-19 07:37:21] -rw-r--r-- 1 boincer umatlas      22061 May 19 07:37 stderr.txt
[2024-05-19 07:37:21] HITS file was successfully produced:
[2024-05-19 07:37:21] -rw------- 1 boincer umatlas 1117000732 May 19 07:35 shared/HITS.pool.root.1
[2024-05-19 07:37:21]  *** Contents of shared directory: ***
[2024-05-19 07:37:21] total 1432600
[2024-05-19 07:37:21] -rw-r--r-- 2 boincer umatlas  329468370 May 17 22:11 ATLAS.root_0
[2024-05-19 07:37:21] -rw-r--r-- 2 boincer umatlas      17537 May 17 22:11 start_atlas.sh
[2024-05-19 07:37:21] -rw-r--r-- 2 boincer umatlas     480166 May 17 22:11 input.tar.gz
[2024-05-19 07:37:21] -rw------- 1 boincer umatlas 1117000732 May 19 07:35 HITS.pool.root.1
[2024-05-19 07:37:21] -rw------- 1 boincer umatlas   19998720 May 19 07:37 result.tar.gz
07:37:22 (155087): run_atlas exited; CPU time 276497.947409
07:37:22 (155087): called boinc_finish(0)

</stderr_txt>
]]>

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