Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
05:43:43 (151817): wrapper (7.7.26015): starting
05:43:43 (151817): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 05:43:43] Arguments: --nthreads 12
[2024-05-18 05:43:43] Threads: 12
[2024-05-18 05:43:43] Checking for CVMFS
[2024-05-18 05:43:43] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 05:43:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 05:43:44] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 05:43:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 05:43:44] 2.10.1.0 70285 184934 161740 132879 1 71 25047413 45568001 4954 130560 0 618975765 99.754 410333474 3812 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-05-18 05:43:44] CVMFS is ok
[2024-05-18 05:43:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 05:43:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 05:43:44] Further information can be found at the LHC@home message board.
[2024-05-18 05:43:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 05:43:44] Checking for apptainer binary...
[2024-05-18 05:43:44] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 05:43:44] Running /usr/bin/apptainer --version
[2024-05-18 05:43:44] apptainer version 1.1.8-1.el7
[2024-05-18 05:43:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 05:43:45] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0055.triumf.lcg
[2024-05-18 05:43:45] apptainer works
[2024-05-18 05:43:45] Set ATHENA_PROC_NUMBER=12
[2024-05-18 05:43:45] Set ATHENA_CORE_NUMBER=12
[2024-05-18 05:43:45] Starting ATLAS job with PandaID=6208359777
[2024-05-18 05:43:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 06:41:12]  *** The last 200 lines of the pilot log: ***
[2024-05-18 06:41:12]  filesize=346754
[2024-05-18 06:41:12]  filetype=log
[2024-05-18 06:41:12]  guid=f5399c08-8444-4dee-a0db-4b8af75b99d1
[2024-05-18 06:41:12]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-18 06:41:12]  is_tar=False
[2024-05-18 06:41:12]  lfn=log.38776125._015346.job.log.tgz.1
[2024-05-18 06:41:12]  mtime=0
[2024-05-18 06:41:12]  protocol_id=None
[2024-05-18 06:41:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-18 06:41:12]  replicas=None
[2024-05-18 06:41:12]  scope=mc23_13p6TeV
[2024-05-18 06:41:12]  status=None
[2024-05-18 06:41:12]  status_code=0
[2024-05-18 06:41:12]  storage_token=
[2024-05-18 06:41:12]  surl=/home/boinc/slots/0/PanDA_Pilot-6208359777/log.38776125._015346.job.log.tgz.1
[2024-05-18 06:41:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/07/a5/log.38776125._015346.job.log.tgz.1
[2024-05-18 06:41:12]  workdir=None
[2024-05-18 06:41:12] ]
[2024-05-18 06:41:12] 2024-05-18 13:40:42,288 | INFO     | transferring file log.38776125._015346.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6208359777/log.38776125._015346.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-18 06:41:12] 2024-05-18 13:40:42,289 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6208359777/log.38776125._015346.job.log.tgz.1 /home/boinc/slots/0/log.38776125._015346.job.log.t
[2024-05-18 06:41:12] 2024-05-18 13:40:42,318 | INFO     | adding to output.list: log.38776125._015346.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/07/a5/log.38776125._015346.job.log.tg
[2024-05-18 06:41:12] 2024-05-18 13:40:42,319 | INFO     | summary of transferred files:
[2024-05-18 06:41:12] 2024-05-18 13:40:42,319 | INFO     |  -- lfn=log.38776125._015346.job.log.tgz.1, status_code=0, status=transferred
[2024-05-18 06:41:12] 2024-05-18 13:40:42,319 | INFO     | stage-out finished correctly
[2024-05-18 06:41:12] 2024-05-18 13:40:44,333 | INFO     | monitor loop #272: job 0:6208359777 is in state 'finished'
[2024-05-18 06:41:12] 2024-05-18 13:40:44,337 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 06:41:12] 2024-05-18 13:40:45,704 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-18 06:41:12] 2024-05-18 13:40:46,211 | INFO     | job 6208359777 has state=finished
[2024-05-18 06:41:12] 2024-05-18 13:40:46,211 | INFO     | preparing for final server update for job 6208359777 in state='finished'
[2024-05-18 06:41:12] 2024-05-18 13:40:46,213 | INFO     | this job has now completed (state=finished)
[2024-05-18 06:41:12] 2024-05-18 13:40:46,213 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-18 06:41:12] 2024-05-18 13:40:46,213 | INFO     | job 6208359777 has finished - writing final server update
[2024-05-18 06:41:12] 2024-05-18 13:40:46,214 | INFO     | total number of processed events: 400 (read)
[2024-05-18 06:41:12] 2024-05-18 13:40:46,222 | INFO     | executing command: lscpu
[2024-05-18 06:41:12] 2024-05-18 13:40:46,290 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-18 06:41:12] 2024-05-18 13:40:46,291 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 06:41:12] 2024-05-18 13:40:46,354 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 06:41:12] 2024-05-18 13:40:46,841 | INFO     | monitor loop #273: job 0:6208359777 is in state 'finished'
[2024-05-18 06:41:12] 2024-05-18 13:40:46,841 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 06:41:12] 2024-05-18 13:40:49,345 | INFO     | monitor loop #274: job 0:6208359777 is in state 'finished'
[2024-05-18 06:41:12] 2024-05-18 13:40:49,345 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 06:41:12] 2024-05-18 13:40:50,817 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-18 06:41:12] 2024-05-18 13:40:50,817 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6208359777/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 06:41:12] 2024-05-18 13:40:50,819 | INFO     | extracted standard info from prmon json
[2024-05-18 06:41:12] 2024-05-18 13:40:50,819 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 06:41:12] 2024-05-18 13:40:50,820 | WARNING  | GPU info not found in prmon json
[2024-05-18 06:41:12] 2024-05-18 13:40:50,820 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 06:41:12] 2024-05-18 13:40:50,820 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 06:41:12] 2024-05-18 13:40:50,823 | INFO     | fitting pss+swap vs Time
[2024-05-18 06:41:12] 2024-05-18 13:40:50,823 | INFO     | model: linear, x: [1716036569.0, 1716036630.0, 1716036691.0, 1716036752.0, 1716036813.0, 1716036874.0, 1716036935.0, 1716036996.0, 1716037057.0, 1716037118.0, 1716
[2024-05-18 06:41:12] 2024-05-18 13:40:50,823 | INFO     | sum of square deviations: 36465800.0
[2024-05-18 06:41:12] 2024-05-18 13:40:50,824 | INFO     | sum of deviations: 13275794841.0
[2024-05-18 06:41:12] 2024-05-18 13:40:50,824 | INFO     | mean x: 1716038033.0
[2024-05-18 06:41:12] 2024-05-18 13:40:50,824 | INFO     | mean y: 2600415.6326530613
[2024-05-18 06:41:12] 2024-05-18 13:40:50,824 | INFO     | -- intersect: -624740826725.9956
[2024-05-18 06:41:12] 2024-05-18 13:40:50,824 | INFO     | intersect: -624740826725.9956
[2024-05-18 06:41:12] 2024-05-18 13:40:50,825 | INFO     | chi2: 2.1525901724869216
[2024-05-18 06:41:12] 2024-05-18 13:40:50,825 | INFO     | -- intersect: -624740826725.9956
[2024-05-18 06:41:12] 2024-05-18 13:40:50,825 | INFO     | current memory leak: 364.06 B/s (using 49 data points, chi2=2.15)
[2024-05-18 06:41:12] 2024-05-18 13:40:50,826 | INFO     | ..............................
[2024-05-18 06:41:12] 2024-05-18 13:40:50,826 | INFO     | . Timing measurements:
[2024-05-18 06:41:12] 2024-05-18 13:40:50,826 | INFO     | . get job = 0 s
[2024-05-18 06:41:12] 2024-05-18 13:40:50,826 | INFO     | . initial setup = 4 s
[2024-05-18 06:41:12] 2024-05-18 13:40:50,826 | INFO     | . payload setup = 5 s
[2024-05-18 06:41:12] 2024-05-18 13:40:50,826 | INFO     | . stage-in = 0 s
[2024-05-18 06:41:12] 2024-05-18 13:40:50,826 | INFO     | . payload execution = 3377 s
[2024-05-18 06:41:12] 2024-05-18 13:40:50,826 | INFO     | . stage-out = 0 s
[2024-05-18 06:41:12] 2024-05-18 13:40:50,826 | INFO     | . log creation = 0 s
[2024-05-18 06:41:12] 2024-05-18 13:40:50,827 | INFO     | ..............................
[2024-05-18 06:41:12] 2024-05-18 13:40:50,915 | INFO     | 
[2024-05-18 06:41:12] 2024-05-18 13:40:50,915 | INFO     | job summary report
[2024-05-18 06:41:12] 2024-05-18 13:40:50,916 | INFO     | --------------------------------------------------
[2024-05-18 06:41:12] 2024-05-18 13:40:50,916 | INFO     | PanDA job id: 6208359777
[2024-05-18 06:41:12] 2024-05-18 13:40:50,916 | INFO     | task id: 38776125
[2024-05-18 06:41:12] 2024-05-18 13:40:50,916 | INFO     | errors: (none)
[2024-05-18 06:41:12] 2024-05-18 13:40:50,916 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 06:41:12] 2024-05-18 13:40:50,916 | INFO     | pilot state: finished 
[2024-05-18 06:41:12] 2024-05-18 13:40:50,916 | INFO     | transexitcode: 0
[2024-05-18 06:41:12] 2024-05-18 13:40:50,917 | INFO     | exeerrorcode: 0
[2024-05-18 06:41:12] 2024-05-18 13:40:50,917 | INFO     | exeerrordiag: 
[2024-05-18 06:41:12] 2024-05-18 13:40:50,917 | INFO     | exitcode: 0
[2024-05-18 06:41:12] 2024-05-18 13:40:50,917 | INFO     | exitmsg: OK
[2024-05-18 06:41:12] 2024-05-18 13:40:50,917 | INFO     | cpuconsumptiontime: 28847 s
[2024-05-18 06:41:12] 2024-05-18 13:40:50,917 | INFO     | nevents: 400
[2024-05-18 06:41:12] 2024-05-18 13:40:50,917 | INFO     | neventsw: 0
[2024-05-18 06:41:12] 2024-05-18 13:40:50,917 | INFO     | pid: 162396
[2024-05-18 06:41:12] 2024-05-18 13:40:50,917 | INFO     | pgrp: 162396
[2024-05-18 06:41:12] 2024-05-18 13:40:50,918 | INFO     | corecount: 12
[2024-05-18 06:41:12] 2024-05-18 13:40:50,918 | INFO     | event service: False
[2024-05-18 06:41:12] 2024-05-18 13:40:50,918 | INFO     | sizes: {0: 2392196, 5: 2392402, 11: 2392458, 3386: 2418071, 3387: 2418070, 3388: 2427080, 3391: 2427264, 3396: 2427434}
[2024-05-18 06:41:12] 2024-05-18 13:40:50,918 | INFO     | --------------------------------------------------
[2024-05-18 06:41:12] 2024-05-18 13:40:50,918 | INFO     | 
[2024-05-18 06:41:12] 2024-05-18 13:40:50,918 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 06:41:12] 2024-05-18 13:40:50,951 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 06:41:12] 2024-05-18 13:40:50,951 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 06:41:12] 2024-05-18 13:40:50,951 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 06:41:12] 2024-05-18 13:40:50,951 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 06:41:12] 2024-05-18 13:40:50,952 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 06:41:12] 2024-05-18 13:40:50,952 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 06:41:12] 2024-05-18 13:40:50,952 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 06:41:12] 2024-05-18 13:40:50,952 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 06:41:12] 2024-05-18 13:40:50,952 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 06:41:12] 2024-05-18 13:40:50,952 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 06:41:12] 2024-05-18 13:40:50,952 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 06:41:12] 2024-05-18 13:40:50,952 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 06:41:12] 2024-05-18 13:40:50,953 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 06:41:12] 2024-05-18 13:40:50,953 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 06:41:12] 2024-05-18 13:40:50,953 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 06:41:12] 2024-05-18 13:40:50,953 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 06:41:12] 2024-05-18 13:40:50,953 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 06:41:12] 2024-05-18 13:40:50,953 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 06:41:12] 2024-05-18 13:40:50,953 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 06:41:12] 2024-05-18 13:40:50,953 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 06:41:12] 2024-05-18 13:40:50,954 | INFO     | job 6208359777 has completed (purged errors)
[2024-05-18 06:41:12] 2024-05-18 13:40:50,954 | INFO     | overall cleanup function is called
[2024-05-18 06:41:12] 2024-05-18 13:40:51,963 | INFO     | --- collectZombieJob: --- 10, [162396]
[2024-05-18 06:41:12] 2024-05-18 13:40:51,964 | INFO     | zombie collector waiting for pid 162396
[2024-05-18 06:41:12] 2024-05-18 13:40:51,964 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 06:41:12] 2024-05-18 13:40:52,970 | INFO     | collected zombie processes
[2024-05-18 06:41:12] 2024-05-18 13:40:52,970 | INFO     | will now attempt to kill all subprocesses of pid=162396
[2024-05-18 06:41:12] 2024-05-18 13:40:53,090 | INFO     | process IDs to be killed: [162396] (in reverse order)
[2024-05-18 06:41:12] 2024-05-18 13:40:53,213 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 06:41:12] 2024-05-18 13:40:53,213 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 06:41:12] 2024-05-18 13:40:53,222 | INFO     | did not find any defunct processes belonging to 162396
[2024-05-18 06:41:12] 2024-05-18 13:40:53,229 | INFO     | did not find any defunct processes belonging to 162396
[2024-05-18 06:41:12] 2024-05-18 13:40:53,229 | INFO     | ready for new job
[2024-05-18 06:41:12] 2024-05-18 13:40:53,229 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 06:41:12] 2024-05-18 13:40:53,232 | INFO     | *************************************
[2024-05-18 06:41:12] 2024-05-18 13:40:53,232 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 06:41:12] 2024-05-18 13:40:53,232 | INFO     | *************************************
[2024-05-18 06:41:12] 2024-05-18 13:40:53,232 | INFO     | 
[2024-05-18 06:41:12] 2024-05-18 13:40:53,237 | INFO     | architecture information:
[2024-05-18 06:41:12] 2024-05-18 13:40:53,237 | INFO     | executing command: cat /etc/os-release
[2024-05-18 06:41:12] 2024-05-18 13:40:53,261 | INFO     | cat /etc/os-release:
[2024-05-18 06:41:12] NAME="CentOS Linux"
[2024-05-18 06:41:12] VERSION="7 (Core)"
[2024-05-18 06:41:12] ID="centos"
[2024-05-18 06:41:12] ID_LIKE="rhel fedora"
[2024-05-18 06:41:12] VERSION_ID="7"
[2024-05-18 06:41:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 06:41:12] ANSI_COLOR="0;31"
[2024-05-18 06:41:12] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 06:41:12] HOME_URL="https://www.centos.org/"
[2024-05-18 06:41:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 06:41:12] 
[2024-05-18 06:41:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 06:41:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 06:41:12] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 06:41:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 06:41:12] 
[2024-05-18 06:41:12] 2024-05-18 13:40:53,261 | INFO     | *************************************
[2024-05-18 06:41:12] 2024-05-18 13:40:53,766 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 06:41:12] 2024-05-18 13:40:53,791 | INFO     | sufficient remaining disk space (2184432320512 B)
[2024-05-18 06:41:12] 2024-05-18 13:40:53,792 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 06:41:12] 2024-05-18 13:40:53,792 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 06:41:12] 2024-05-18 13:40:53,792 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 06:41:12] 2024-05-18 13:40:53,793 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 06:41:12] 2024-05-18 13:40:53,793 | INFO     | aborting loop
[2024-05-18 06:41:12] 2024-05-18 13:40:53,963 | INFO     | all job control threads have been joined
[2024-05-18 06:41:12] 2024-05-18 13:40:53,998 | INFO     | all data control threads have been joined
[2024-05-18 06:41:12] 2024-05-18 13:40:54,419 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 06:41:12] 2024-05-18 13:40:54,419 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 06:41:12] 2024-05-18 13:40:54,419 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 06:41:12] 2024-05-18 13:40:54,542 | INFO     | all payload control threads have been joined
[2024-05-18 06:41:12] 2024-05-18 13:40:54,798 | INFO     | [job] retrieve thread has finished
[2024-05-18 06:41:12] 2024-05-18 13:40:54,799 | INFO     | [job] job monitor thread has finished
[2024-05-18 06:41:12] 2024-05-18 13:40:54,898 | INFO     | [data] copytool_in thread has finished
[2024-05-18 06:41:12] 2024-05-18 13:40:54,969 | INFO     | [job] control thread has finished
[2024-05-18 06:41:12] 2024-05-18 13:40:55,006 | INFO     | [data] control thread has finished
[2024-05-18 06:41:12] 2024-05-18 13:40:55,025 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 06:41:12] 2024-05-18 13:40:55,229 | INFO     | [payload] validate_post thread has finished
[2024-05-18 06:41:12] 2024-05-18 13:40:55,420 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 06:41:12] 2024-05-18 13:40:55,489 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 06:41:12] 2024-05-18 13:40:55,548 | INFO     | [payload] control thread has finished
[2024-05-18 06:41:12] 2024-05-18 13:40:55,799 | INFO     | [data] copytool_out thread has finished
[2024-05-18 06:41:12] 2024-05-18 13:40:55,927 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 06:41:12] 2024-05-18 13:40:55,979 | INFO     | [job] validate thread has finished
[2024-05-18 06:41:12] 2024-05-18 13:40:56,317 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 06:41:12] 2024-05-18 13:40:56,325 | INFO     | [payload] failed_post thread has finished
[2024-05-18 06:41:12] 2024-05-18 13:40:56,934 | INFO     | [job] queue monitor thread has finished
[2024-05-18 06:41:12] 2024-05-18 13:41:00,326 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 06:41:12] 2024-05-18 13:41:03,858 | INFO     | job.realtimelogging is not enabled
[2024-05-18 06:41:12] 2024-05-18 13:41:04,864 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 06:41:12] 2024-05-18 13:41:05,908 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140685455632192)>', '<ExcThread(monitor, started 140685176977152)>']
[2024-05-18 06:41:12] 2024-05-18 13:41:06,491 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 06:41:12] 2024-05-18 13:41:06,491 | INFO     | [monitor] control thread has ended
[2024-05-18 06:41:12] 2024-05-18 13:41:10,934 | INFO     | all workflow threads have been joined
[2024-05-18 06:41:12] 2024-05-18 13:41:10,934 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 06:41:12] 2024-05-18 13:41:10,935 | INFO     | traces error code: 0
[2024-05-18 06:41:12] 2024-05-18 13:41:10,935 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 06:41:12] 2024-05-18 13:41:11,035 [wrapper] ==== pilot stdout END ====
[2024-05-18 06:41:12] 2024-05-18 13:41:11,039 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 06:41:12] 2024-05-18 13:41:11,043 [wrapper] pilotpid: 155989
[2024-05-18 06:41:12] 2024-05-18 13:41:11,047 [wrapper] Pilot exit status: 0
[2024-05-18 06:41:12] 2024-05-18 13:41:11,060 [wrapper] pandaids: 6208359777
[2024-05-18 06:41:12] 2024-05-18 13:41:11,125 [wrapper] cleanup: SIGTERM to supervisor_pilot 191539 155990
[2024-05-18 06:41:12] 2024-05-18 13:41:11,128 [wrapper] Test setup, not cleaning
[2024-05-18 06:41:12] 2024-05-18 13:41:11,131 [wrapper] ==== wrapper stdout END ====
[2024-05-18 06:41:12] 2024-05-18 13:41:11,134 [wrapper] ==== wrapper stderr END ====
[2024-05-18 06:41:12] 2024-05-18 13:41:11,140 [wrapper] apfmon messages muted
[2024-05-18 06:41:12]  *** Error codes and diagnostics ***
[2024-05-18 06:41:12]     "exeErrorCode": 0,
[2024-05-18 06:41:12]     "exeErrorDiag": "",
[2024-05-18 06:41:12]     "pilotErrorCode": 0,
[2024-05-18 06:41:12]     "pilotErrorDiag": "",
[2024-05-18 06:41:12]  *** Listing of results directory ***
[2024-05-18 06:41:12] total 828100
[2024-05-18 06:41:12] -rw-r--r-- 1 boinc boinc    467845 May 17 15:03 pilot3.tar.gz
[2024-05-18 06:41:12] -rwx------ 1 boinc boinc     32251 May 17 15:05 runpilot2-wrapper.sh
[2024-05-18 06:41:12] -rw-r--r-- 1 boinc boinc      5633 May 17 15:05 queuedata.json
[2024-05-18 06:41:12] -rw-r--r-- 1 boinc boinc       100 May 18 05:43 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 06:41:12] -rwxr-xr-x 1 boinc boinc      7986 May 18 05:43 run_atlas
[2024-05-18 06:41:12] -rw-r--r-- 1 boinc boinc       105 May 18 05:43 job.xml
[2024-05-18 06:41:12] -rw-r--r-- 2 boinc boinc 597796544 May 18 05:43 EVNT.38776119._000434.pool.root.1
[2024-05-18 06:41:12] -rw-r--r-- 2 boinc boinc     17537 May 18 05:43 start_atlas.sh
[2024-05-18 06:41:12] drwxrwx--x 2 boinc boinc      4096 May 18 05:43 shared
[2024-05-18 06:41:12] -rw-r--r-- 2 boinc boinc    480004 May 18 05:43 input.tar.gz
[2024-05-18 06:41:12] -rw-r--r-- 1 boinc boinc      6627 May 18 05:43 init_data.xml
[2024-05-18 06:41:12] -rw-r--r-- 1 boinc boinc         0 May 18 05:43 boinc_lockfile
[2024-05-18 06:41:12] -rw-r--r-- 1 boinc boinc      2636 May 18 05:43 pandaJob.out
[2024-05-18 06:41:12] -rw------- 1 boinc boinc       424 May 18 05:43 setup.sh.local
[2024-05-18 06:41:12] -rw------- 1 boinc boinc   1019073 May 18 05:43 agis_schedconf.cvmfs.json
[2024-05-18 06:41:12] -rw------- 1 boinc boinc         0 May 18 05:43 agis_ddmendpoints.agis.ALL.json
[2024-05-18 06:41:12] -rw------- 1 boinc boinc   1324701 May 18 05:43 cric_ddmendpoints.json
[2024-05-18 06:41:12] drwx------ 4 boinc boinc      4096 May 18 05:43 pilot3
[2024-05-18 06:41:12] -rw------- 1 boinc boinc        95 May 18 06:40 pilot_heartbeat.json
[2024-05-18 06:41:12] -rw------- 1 boinc boinc 245244894 May 18 06:40 HITS.38776125._015346.pool.root.1
[2024-05-18 06:41:12] -rw-r--r-- 1 boinc boinc       530 May 18 06:40 boinc_task_state.xml
[2024-05-18 06:41:12] -rw------- 1 boinc boinc      1043 May 18 06:40 memory_monitor_summary.json
[2024-05-18 06:41:12] -rw------- 1 boinc boinc    346754 May 18 06:40 log.38776125._015346.job.log.tgz.1
[2024-05-18 06:41:12] -rw------- 1 boinc boinc      7760 May 18 06:40 heartbeat.json
[2024-05-18 06:41:12] -rw-r--r-- 1 boinc boinc        27 May 18 06:40 wrapper_checkpoint.txt
[2024-05-18 06:41:12] -rw-r--r-- 1 boinc boinc      8192 May 18 06:40 boinc_mmap_file
[2024-05-18 06:41:12] -rw------- 1 boinc boinc      4282 May 18 06:41 pilotlog.txt
[2024-05-18 06:41:12] -rw------- 1 boinc boinc    353728 May 18 06:41 log.38776125._015346.job.log.1
[2024-05-18 06:41:12] -rw------- 1 boinc boinc       357 May 18 06:41 output.list
[2024-05-18 06:41:12] -rw-r--r-- 1 boinc boinc       620 May 18 06:41 runtime_log
[2024-05-18 06:41:12] -rw------- 1 boinc boinc    716800 May 18 06:41 result.tar.gz
[2024-05-18 06:41:12] -rw-r--r-- 1 boinc boinc     11286 May 18 06:41 runtime_log.err
[2024-05-18 06:41:12] -rw------- 1 boinc boinc       651 May 18 06:41 RCqNDmtsKS5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmVWLKDmOh5VMm.diag
[2024-05-18 06:41:12] -rw-r--r-- 1 boinc boinc     21614 May 18 06:41 stderr.txt
[2024-05-18 06:41:12] HITS file was successfully produced:
[2024-05-18 06:41:12] -rw------- 1 boinc boinc 245244894 May 18 06:40 shared/HITS.pool.root.1
[2024-05-18 06:41:12]  *** Contents of shared directory: ***
[2024-05-18 06:41:12] total 824488
[2024-05-18 06:41:12] -rw-r--r-- 2 boinc boinc 597796544 May 18 05:43 ATLAS.root_0
[2024-05-18 06:41:12] -rw-r--r-- 2 boinc boinc     17537 May 18 05:43 start_atlas.sh
[2024-05-18 06:41:12] -rw-r--r-- 2 boinc boinc    480004 May 18 05:43 input.tar.gz
[2024-05-18 06:41:12] -rw------- 1 boinc boinc 245244894 May 18 06:40 HITS.pool.root.1
[2024-05-18 06:41:12] -rw------- 1 boinc boinc    716800 May 18 06:41 result.tar.gz
06:41:13 (151817): run_atlas exited; CPU time 28773.566455
06:41:13 (151817): called boinc_finish(0)

</stderr_txt>
]]>

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