Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
08:13:38 (16327): wrapper (7.7.26015): starting
08:13:38 (16327): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 08:13:38] Arguments: --nthreads 12
[2024-05-18 08:13:38] Threads: 12
[2024-05-18 08:13:38] Checking for CVMFS
[2024-05-18 08:13:38] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 08:13:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 08:13:38] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 08:13:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 08:13:39] 2.10.1.0 152792 185080 183156 132882 1 321 44168354 45568000 11320 130560 0 1210102603 99.765 748667916 15873 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-05-18 08:13:39] CVMFS is ok
[2024-05-18 08:13:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 08:13:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 08:13:39] Further information can be found at the LHC@home message board.
[2024-05-18 08:13:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 08:13:39] Checking for apptainer binary...
[2024-05-18 08:13:39] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 08:13:39] Running /usr/bin/apptainer --version
[2024-05-18 08:13:39] apptainer version 1.1.8-1.el7
[2024-05-18 08:13:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 08:13:40] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0064.triumf.lcg
[2024-05-18 08:13:40] apptainer works
[2024-05-18 08:13:40] Set ATHENA_PROC_NUMBER=12
[2024-05-18 08:13:40] Set ATHENA_CORE_NUMBER=12
[2024-05-18 08:13:40] Starting ATLAS job with PandaID=6208359766
[2024-05-18 08:13:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 09:13:17]  *** The last 200 lines of the pilot log: ***
[2024-05-18 09:13:17]  ddm_activity=['write_lan', 'write_wan']
[2024-05-18 09:13:17]  ddmendpoint=NDGF-T1_DATADISK
[2024-05-18 09:13:17]  direct_access_lan=False
[2024-05-18 09:13:17]  direct_access_wan=False
[2024-05-18 09:13:17]  domain=
[2024-05-18 09:13:17]  filesize=365279
[2024-05-18 09:13:17]  filetype=log
[2024-05-18 09:13:17]  guid=56c61cdf-ebae-4570-af94-db20d0cc9428
[2024-05-18 09:13:17]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-18 09:13:17]  is_tar=False
[2024-05-18 09:13:17]  lfn=log.38776125._015336.job.log.tgz.1
[2024-05-18 09:13:17]  mtime=0
[2024-05-18 09:13:17]  protocol_id=None
[2024-05-18 09:13:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-18 09:13:17]  replicas=None
[2024-05-18 09:13:17]  scope=mc23_13p6TeV
[2024-05-18 09:13:17]  status=None
[2024-05-18 09:13:17]  status_code=0
[2024-05-18 09:13:17]  storage_token=
[2024-05-18 09:13:17]  surl=/home/boinc/slots/0/PanDA_Pilot-6208359766/log.38776125._015336.job.log.tgz.1
[2024-05-18 09:13:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a9/b3/log.38776125._015336.job.log.tgz.1
[2024-05-18 09:13:17]  workdir=None
[2024-05-18 09:13:17] ]
[2024-05-18 09:13:17] 2024-05-18 16:12:55,882 | INFO     | transferring file log.38776125._015336.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6208359766/log.38776125._015336.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-18 09:13:17] 2024-05-18 16:12:55,882 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6208359766/log.38776125._015336.job.log.tgz.1 /home/boinc/slots/0/log.38776125._015336.job.log.t
[2024-05-18 09:13:17] 2024-05-18 16:12:55,909 | INFO     | adding to output.list: log.38776125._015336.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a9/b3/log.38776125._015336.job.log.tg
[2024-05-18 09:13:17] 2024-05-18 16:12:55,910 | INFO     | summary of transferred files:
[2024-05-18 09:13:17] 2024-05-18 16:12:55,910 | INFO     |  -- lfn=log.38776125._015336.job.log.tgz.1, status_code=0, status=transferred
[2024-05-18 09:13:17] 2024-05-18 16:12:55,910 | INFO     | stage-out finished correctly
[2024-05-18 09:13:17] 2024-05-18 16:12:56,265 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-18 09:13:17] 2024-05-18 16:12:56,967 | INFO     | job 6208359766 has state=finished
[2024-05-18 09:13:17] 2024-05-18 16:12:56,967 | INFO     | preparing for final server update for job 6208359766 in state='finished'
[2024-05-18 09:13:17] 2024-05-18 16:12:56,968 | INFO     | this job has now completed (state=finished)
[2024-05-18 09:13:17] 2024-05-18 16:12:56,968 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-18 09:13:17] 2024-05-18 16:12:56,968 | INFO     | job 6208359766 has finished - writing final server update
[2024-05-18 09:13:17] 2024-05-18 16:12:56,968 | INFO     | total number of processed events: 400 (read)
[2024-05-18 09:13:17] 2024-05-18 16:12:56,975 | INFO     | executing command: lscpu
[2024-05-18 09:13:17] 2024-05-18 16:12:57,035 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-18 09:13:17] 2024-05-18 16:12:57,036 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 09:13:17] 2024-05-18 16:12:57,092 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 09:13:17] 2024-05-18 16:13:01,020 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-18 09:13:17] 2024-05-18 16:13:01,020 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6208359766/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 09:13:17] 2024-05-18 16:13:01,025 | INFO     | extracted standard info from prmon json
[2024-05-18 09:13:17] 2024-05-18 16:13:01,025 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 09:13:17] 2024-05-18 16:13:01,025 | WARNING  | GPU info not found in prmon json
[2024-05-18 09:13:17] 2024-05-18 16:13:01,026 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 09:13:17] 2024-05-18 16:13:01,026 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 09:13:17] 2024-05-18 16:13:01,027 | INFO     | fitting pss+swap vs Time
[2024-05-18 09:13:17] 2024-05-18 16:13:01,028 | INFO     | model: linear, x: [1716045558.0, 1716045619.0, 1716045680.0, 1716045741.0, 1716045802.0, 1716045863.0, 1716045924.0, 1716045985.0, 1716046046.0, 1716046107.0, 1716
[2024-05-18 09:13:17] 2024-05-18 16:13:01,028 | INFO     | sum of square deviations: 41117050.0
[2024-05-18 09:13:17] 2024-05-18 16:13:01,028 | INFO     | sum of deviations: 18925991150.0
[2024-05-18 09:13:17] 2024-05-18 16:13:01,028 | INFO     | mean x: 1716047083.0
[2024-05-18 09:13:17] 2024-05-18 16:13:01,028 | INFO     | mean y: 2531262.3921568627
[2024-05-18 09:13:17] 2024-05-18 16:13:01,028 | INFO     | -- intersect: -789886137935.4543
[2024-05-18 09:13:17] 2024-05-18 16:13:01,028 | INFO     | intersect: -789886137935.4543
[2024-05-18 09:13:17] 2024-05-18 16:13:01,028 | INFO     | chi2: 2.142758894066397
[2024-05-18 09:13:17] 2024-05-18 16:13:01,028 | INFO     | -- intersect: -789886137935.4543
[2024-05-18 09:13:17] 2024-05-18 16:13:01,029 | INFO     | current memory leak: 460.30 B/s (using 51 data points, chi2=2.14)
[2024-05-18 09:13:17] 2024-05-18 16:13:01,029 | INFO     | ..............................
[2024-05-18 09:13:17] 2024-05-18 16:13:01,029 | INFO     | . Timing measurements:
[2024-05-18 09:13:17] 2024-05-18 16:13:01,029 | INFO     | . get job = 0 s
[2024-05-18 09:13:17] 2024-05-18 16:13:01,029 | INFO     | . initial setup = 2 s
[2024-05-18 09:13:17] 2024-05-18 16:13:01,029 | INFO     | . payload setup = 5 s
[2024-05-18 09:13:17] 2024-05-18 16:13:01,029 | INFO     | . stage-in = 0 s
[2024-05-18 09:13:17] 2024-05-18 16:13:01,029 | INFO     | . payload execution = 3521 s
[2024-05-18 09:13:17] 2024-05-18 16:13:01,029 | INFO     | . stage-out = 0 s
[2024-05-18 09:13:17] 2024-05-18 16:13:01,029 | INFO     | . log creation = 0 s
[2024-05-18 09:13:17] 2024-05-18 16:13:01,029 | INFO     | ..............................
[2024-05-18 09:13:17] 2024-05-18 16:13:01,086 | INFO     | 
[2024-05-18 09:13:17] 2024-05-18 16:13:01,086 | INFO     | job summary report
[2024-05-18 09:13:17] 2024-05-18 16:13:01,086 | INFO     | --------------------------------------------------
[2024-05-18 09:13:17] 2024-05-18 16:13:01,086 | INFO     | PanDA job id: 6208359766
[2024-05-18 09:13:17] 2024-05-18 16:13:01,086 | INFO     | task id: 38776125
[2024-05-18 09:13:17] 2024-05-18 16:13:01,087 | INFO     | errors: (none)
[2024-05-18 09:13:17] 2024-05-18 16:13:01,087 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 09:13:17] 2024-05-18 16:13:01,087 | INFO     | pilot state: finished 
[2024-05-18 09:13:17] 2024-05-18 16:13:01,087 | INFO     | transexitcode: 0
[2024-05-18 09:13:17] 2024-05-18 16:13:01,087 | INFO     | exeerrorcode: 0
[2024-05-18 09:13:17] 2024-05-18 16:13:01,087 | INFO     | exeerrordiag: 
[2024-05-18 09:13:17] 2024-05-18 16:13:01,087 | INFO     | exitcode: 0
[2024-05-18 09:13:17] 2024-05-18 16:13:01,087 | INFO     | exitmsg: OK
[2024-05-18 09:13:17] 2024-05-18 16:13:01,087 | INFO     | cpuconsumptiontime: 31306 s
[2024-05-18 09:13:17] 2024-05-18 16:13:01,087 | INFO     | nevents: 400
[2024-05-18 09:13:17] 2024-05-18 16:13:01,087 | INFO     | neventsw: 0
[2024-05-18 09:13:17] 2024-05-18 16:13:01,087 | INFO     | pid: 41567
[2024-05-18 09:13:17] 2024-05-18 16:13:01,087 | INFO     | pgrp: 41567
[2024-05-18 09:13:17] 2024-05-18 16:13:01,087 | INFO     | corecount: 12
[2024-05-18 09:13:17] 2024-05-18 16:13:01,088 | INFO     | event service: False
[2024-05-18 09:13:17] 2024-05-18 16:13:01,088 | INFO     | sizes: {0: 2392145, 4: 2392351, 11: 2392379, 3530: 2418026, 3531: 2426980, 3532: 2427036, 3536: 2427334}
[2024-05-18 09:13:17] 2024-05-18 16:13:01,088 | INFO     | --------------------------------------------------
[2024-05-18 09:13:17] 2024-05-18 16:13:01,088 | INFO     | 
[2024-05-18 09:13:17] 2024-05-18 16:13:01,088 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 09:13:17] 2024-05-18 16:13:01,178 | WARNING  | process 41567 is no longer using CPU - aborting
[2024-05-18 09:13:17] 2024-05-18 16:13:01,182 | INFO     | aborting job monitoring since job object (job id=6208359766) has expired
[2024-05-18 09:13:17] 2024-05-18 16:13:01,206 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 09:13:17] 2024-05-18 16:13:01,207 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 09:13:17] 2024-05-18 16:13:01,207 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 09:13:17] 2024-05-18 16:13:01,207 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 09:13:17] 2024-05-18 16:13:01,207 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 09:13:17] 2024-05-18 16:13:01,207 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 09:13:17] 2024-05-18 16:13:01,207 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 09:13:17] 2024-05-18 16:13:01,207 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 09:13:17] 2024-05-18 16:13:01,207 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 09:13:17] 2024-05-18 16:13:01,207 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 09:13:17] 2024-05-18 16:13:01,207 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 09:13:17] 2024-05-18 16:13:01,207 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 09:13:17] 2024-05-18 16:13:01,207 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 09:13:17] 2024-05-18 16:13:01,207 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 09:13:17] 2024-05-18 16:13:01,207 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 09:13:17] 2024-05-18 16:13:01,207 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 09:13:17] 2024-05-18 16:13:01,207 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 09:13:17] 2024-05-18 16:13:01,208 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 09:13:17] 2024-05-18 16:13:01,208 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 09:13:17] 2024-05-18 16:13:01,208 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 09:13:17] 2024-05-18 16:13:01,208 | INFO     | job 6208359766 has completed (purged errors)
[2024-05-18 09:13:17] 2024-05-18 16:13:01,208 | INFO     | overall cleanup function is called
[2024-05-18 09:13:17] 2024-05-18 16:13:02,215 | INFO     | --- collectZombieJob: --- 10, [41567]
[2024-05-18 09:13:17] 2024-05-18 16:13:02,216 | INFO     | zombie collector waiting for pid 41567
[2024-05-18 09:13:17] 2024-05-18 16:13:02,216 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 09:13:17] 2024-05-18 16:13:03,221 | INFO     | collected zombie processes
[2024-05-18 09:13:17] 2024-05-18 16:13:03,222 | INFO     | will now attempt to kill all subprocesses of pid=41567
[2024-05-18 09:13:17] 2024-05-18 16:13:03,381 | INFO     | process IDs to be killed: [41567] (in reverse order)
[2024-05-18 09:13:17] 2024-05-18 16:13:03,484 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 09:13:17] 2024-05-18 16:13:03,484 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 09:13:17] 2024-05-18 16:13:03,490 | INFO     | did not find any defunct processes belonging to 41567
[2024-05-18 09:13:17] 2024-05-18 16:13:03,494 | INFO     | did not find any defunct processes belonging to 41567
[2024-05-18 09:13:17] 2024-05-18 16:13:03,494 | INFO     | ready for new job
[2024-05-18 09:13:17] 2024-05-18 16:13:03,494 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 09:13:17] 2024-05-18 16:13:03,495 | INFO     | *************************************
[2024-05-18 09:13:17] 2024-05-18 16:13:03,495 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 09:13:17] 2024-05-18 16:13:03,495 | INFO     | *************************************
[2024-05-18 09:13:17] 2024-05-18 16:13:03,495 | INFO     | 
[2024-05-18 09:13:17] 2024-05-18 16:13:03,498 | INFO     | architecture information:
[2024-05-18 09:13:17] 2024-05-18 16:13:03,498 | INFO     | executing command: cat /etc/os-release
[2024-05-18 09:13:17] 2024-05-18 16:13:03,516 | INFO     | cat /etc/os-release:
[2024-05-18 09:13:17] NAME="CentOS Linux"
[2024-05-18 09:13:17] VERSION="7 (Core)"
[2024-05-18 09:13:17] ID="centos"
[2024-05-18 09:13:17] ID_LIKE="rhel fedora"
[2024-05-18 09:13:17] VERSION_ID="7"
[2024-05-18 09:13:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 09:13:17] ANSI_COLOR="0;31"
[2024-05-18 09:13:17] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 09:13:17] HOME_URL="https://www.centos.org/"
[2024-05-18 09:13:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 09:13:17] 
[2024-05-18 09:13:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 09:13:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 09:13:17] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 09:13:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 09:13:17] 
[2024-05-18 09:13:17] 2024-05-18 16:13:03,516 | INFO     | *************************************
[2024-05-18 09:13:17] 2024-05-18 16:13:04,020 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 09:13:17] 2024-05-18 16:13:04,043 | INFO     | sufficient remaining disk space (2121607938048 B)
[2024-05-18 09:13:17] 2024-05-18 16:13:04,043 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 09:13:17] 2024-05-18 16:13:04,044 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 09:13:17] 2024-05-18 16:13:04,044 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 09:13:17] 2024-05-18 16:13:04,327 | INFO     | all data control threads have been joined
[2024-05-18 09:13:17] 2024-05-18 16:13:04,695 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 09:13:17] 2024-05-18 16:13:04,696 | INFO     | aborting loop
[2024-05-18 09:13:17] 2024-05-18 16:13:04,736 | INFO     | all payload control threads have been joined
[2024-05-18 09:13:17] 2024-05-18 16:13:04,850 | INFO     | all job control threads have been joined
[2024-05-18 09:13:17] 2024-05-18 16:13:04,869 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 09:13:17] 2024-05-18 16:13:04,869 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 09:13:17] 2024-05-18 16:13:04,869 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 09:13:17] 2024-05-18 16:13:05,049 | INFO     | [job] retrieve thread has finished
[2024-05-18 09:13:17] 2024-05-18 16:13:05,074 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 09:13:17] 2024-05-18 16:13:05,217 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 09:13:17] 2024-05-18 16:13:05,332 | INFO     | [data] control thread has finished
[2024-05-18 09:13:17] 2024-05-18 16:13:05,377 | INFO     | [payload] validate_post thread has finished
[2024-05-18 09:13:17] 2024-05-18 16:13:05,702 | INFO     | [job] job monitor thread has finished
[2024-05-18 09:13:17] 2024-05-18 16:13:05,742 | INFO     | [payload] control thread has finished
[2024-05-18 09:13:17] 2024-05-18 16:13:05,855 | INFO     | [job] control thread has finished
[2024-05-18 09:13:17] 2024-05-18 16:13:05,940 | INFO     | [data] copytool_in thread has finished
[2024-05-18 09:13:17] 2024-05-18 16:13:06,050 | INFO     | [data] copytool_out thread has finished
[2024-05-18 09:13:17] 2024-05-18 16:13:06,075 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 09:13:17] 2024-05-18 16:13:06,094 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 09:13:17] 2024-05-18 16:13:06,418 | INFO     | [payload] failed_post thread has finished
[2024-05-18 09:13:17] 2024-05-18 16:13:06,436 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 09:13:17] 2024-05-18 16:13:06,437 | INFO     | [job] validate thread has finished
[2024-05-18 09:13:17] 2024-05-18 16:13:06,863 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 09:13:17] 2024-05-18 16:13:07,099 | INFO     | [job] queue monitor thread has finished
[2024-05-18 09:13:17] 2024-05-18 16:13:10,868 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 09:13:17] 2024-05-18 16:13:11,779 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139716438472512)>', '<ExcThread(monitor, started 139715873330944)>']
[2024-05-18 09:13:17] 2024-05-18 16:13:11,901 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 09:13:17] 2024-05-18 16:13:11,902 | INFO     | [monitor] control thread has ended
[2024-05-18 09:13:17] 2024-05-18 16:13:16,806 | INFO     | all workflow threads have been joined
[2024-05-18 09:13:17] 2024-05-18 16:13:16,806 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 09:13:17] 2024-05-18 16:13:16,807 | INFO     | traces error code: 0
[2024-05-18 09:13:17] 2024-05-18 16:13:16,807 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 09:13:17] 2024-05-18 16:13:16,901 [wrapper] ==== pilot stdout END ====
[2024-05-18 09:13:17] 2024-05-18 16:13:16,905 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 09:13:17] 2024-05-18 16:13:16,909 [wrapper] pilotpid: 24474
[2024-05-18 09:13:17] 2024-05-18 16:13:16,913 [wrapper] Pilot exit status: 0
[2024-05-18 09:13:17] 2024-05-18 16:13:16,925 [wrapper] pandaids: 6208359766
[2024-05-18 09:13:17] 2024-05-18 16:13:17,004 [wrapper] cleanup: SIGTERM to supervisor_pilot  74554 24475
[2024-05-18 09:13:17] 2024-05-18 16:13:17,008 [wrapper] Test setup, not cleaning
[2024-05-18 09:13:17] 2024-05-18 16:13:17,012 [wrapper] ==== wrapper stdout END ====
[2024-05-18 09:13:17] 2024-05-18 16:13:17,016 [wrapper] ==== wrapper stderr END ====
[2024-05-18 09:13:17] 2024-05-18 16:13:17,024 [wrapper] apfmon messages muted
[2024-05-18 09:13:17]  *** Error codes and diagnostics ***
[2024-05-18 09:13:17]     "exeErrorCode": 0,
[2024-05-18 09:13:17]     "exeErrorDiag": "",
[2024-05-18 09:13:17]     "pilotErrorCode": 0,
[2024-05-18 09:13:17]     "pilotErrorDiag": "",
[2024-05-18 09:13:17]  *** Listing of results directory ***
[2024-05-18 09:13:17] total 833492
[2024-05-18 09:13:17] -rw-r--r-- 1 boinc boinc    467845 May 17 15:03 pilot3.tar.gz
[2024-05-18 09:13:17] -rwx------ 1 boinc boinc     32251 May 17 15:05 runpilot2-wrapper.sh
[2024-05-18 09:13:17] -rw-r--r-- 1 boinc boinc      5633 May 17 15:05 queuedata.json
[2024-05-18 09:13:17] -rw-r--r-- 1 boinc boinc       100 May 18 08:13 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 09:13:17] -rwxr-xr-x 1 boinc boinc      7986 May 18 08:13 run_atlas
[2024-05-18 09:13:17] -rw-r--r-- 1 boinc boinc       105 May 18 08:13 job.xml
[2024-05-18 09:13:17] -rw-r--r-- 1 boinc boinc      6627 May 18 08:13 init_data.xml
[2024-05-18 09:13:17] -rw-r--r-- 2 boinc boinc 599342286 May 18 08:13 EVNT.38776119._000432.pool.root.1
[2024-05-18 09:13:17] -rw-r--r-- 2 boinc boinc     17537 May 18 08:13 start_atlas.sh
[2024-05-18 09:13:17] drwxrwx--x 2 boinc boinc      4096 May 18 08:13 shared
[2024-05-18 09:13:17] -rw-r--r-- 2 boinc boinc    480006 May 18 08:13 input.tar.gz
[2024-05-18 09:13:17] -rw-r--r-- 1 boinc boinc         0 May 18 08:13 boinc_lockfile
[2024-05-18 09:13:17] -rw-r--r-- 1 boinc boinc      2635 May 18 08:13 pandaJob.out
[2024-05-18 09:13:17] -rw------- 1 boinc boinc       424 May 18 08:13 setup.sh.local
[2024-05-18 09:13:17] -rw------- 1 boinc boinc   1019426 May 18 08:13 agis_schedconf.cvmfs.json
[2024-05-18 09:13:17] -rw------- 1 boinc boinc         0 May 18 08:13 agis_ddmendpoints.agis.ALL.json
[2024-05-18 09:13:17] -rw------- 1 boinc boinc   1324701 May 18 08:13 cric_ddmendpoints.json
[2024-05-18 09:13:17] drwx------ 4 boinc boinc      4096 May 18 08:13 pilot3
[2024-05-18 09:13:17] -rw------- 1 boinc boinc 249161508 May 18 09:12 HITS.38776125._015336.pool.root.1
[2024-05-18 09:13:17] -rw-r--r-- 1 boinc boinc       531 May 18 09:12 boinc_task_state.xml
[2024-05-18 09:13:17] -rw------- 1 boinc boinc      1056 May 18 09:12 memory_monitor_summary.json
[2024-05-18 09:13:17] -rw------- 1 boinc boinc    365279 May 18 09:12 log.38776125._015336.job.log.tgz.1
[2024-05-18 09:13:17] -rw------- 1 boinc boinc        95 May 18 09:12 pilot_heartbeat.json
[2024-05-18 09:13:17] -rw-r--r-- 1 boinc boinc      8192 May 18 09:12 boinc_mmap_file
[2024-05-18 09:13:17] -rw-r--r-- 1 boinc boinc        27 May 18 09:12 wrapper_checkpoint.txt
[2024-05-18 09:13:17] -rw------- 1 boinc boinc      7774 May 18 09:13 heartbeat.json
[2024-05-18 09:13:17] -rw------- 1 boinc boinc      4210 May 18 09:13 pilotlog.txt
[2024-05-18 09:13:17] -rw------- 1 boinc boinc    362268 May 18 09:13 log.38776125._015336.job.log.1
[2024-05-18 09:13:17] -rw------- 1 boinc boinc       357 May 18 09:13 output.list
[2024-05-18 09:13:17] -rw-r--r-- 1 boinc boinc       620 May 18 09:13 runtime_log
[2024-05-18 09:13:17] -rw------- 1 boinc boinc    747520 May 18 09:13 result.tar.gz
[2024-05-18 09:13:17] -rw-r--r-- 1 boinc boinc     11286 May 18 09:13 runtime_log.err
[2024-05-18 09:13:17] -rw------- 1 boinc boinc       651 May 18 09:13 RfZNDmtsKS5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmNWLKDmaVopHm.diag
[2024-05-18 09:13:17] -rw-r--r-- 1 boinc boinc     21211 May 18 09:13 stderr.txt
[2024-05-18 09:13:17] HITS file was successfully produced:
[2024-05-18 09:13:17] -rw------- 1 boinc boinc 249161508 May 18 09:12 shared/HITS.pool.root.1
[2024-05-18 09:13:17]  *** Contents of shared directory: ***
[2024-05-18 09:13:17] total 829852
[2024-05-18 09:13:17] -rw-r--r-- 2 boinc boinc 599342286 May 18 08:13 ATLAS.root_0
[2024-05-18 09:13:17] -rw-r--r-- 2 boinc boinc     17537 May 18 08:13 start_atlas.sh
[2024-05-18 09:13:17] -rw-r--r-- 2 boinc boinc    480006 May 18 08:13 input.tar.gz
[2024-05-18 09:13:17] -rw------- 1 boinc boinc 249161508 May 18 09:12 HITS.pool.root.1
[2024-05-18 09:13:17] -rw------- 1 boinc boinc    747520 May 18 09:13 result.tar.gz
09:13:19 (16327): run_atlas exited; CPU time 31209.618609
09:13:19 (16327): called boinc_finish(0)

</stderr_txt>
]]>

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