Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
01:49:48 (26178): wrapper (7.7.26015): starting
01:49:48 (26178): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 01:49:48] Arguments: --nthreads 12
[2024-05-18 01:49:48] Threads: 12
[2024-05-18 01:49:48] Checking for CVMFS
[2024-05-18 01:49:48] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 01:49:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 01:49:48] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 01:49:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 01:49:48] 2.10.1.0 250101 184699 206116 132872 0 366 30948660 45568000 13098 130560 0 1134943353 99.780 662325022 18854 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-05-18 01:49:48] CVMFS is ok
[2024-05-18 01:49:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 01:49:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 01:49:48] Further information can be found at the LHC@home message board.
[2024-05-18 01:49:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 01:49:48] Checking for apptainer binary...
[2024-05-18 01:49:48] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 01:49:48] Running /usr/bin/apptainer --version
[2024-05-18 01:49:48] apptainer version 1.1.8-1.el7
[2024-05-18 01:49:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 01:49:49] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0168.triumf.lcg
[2024-05-18 01:49:49] apptainer works
[2024-05-18 01:49:49] Set ATHENA_PROC_NUMBER=12
[2024-05-18 01:49:49] Set ATHENA_CORE_NUMBER=12
[2024-05-18 01:49:49] Starting ATLAS job with PandaID=6208359364
[2024-05-18 01:49:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 02:55:32]  *** The last 200 lines of the pilot log: ***
[2024-05-18 02:55:32]  direct_access_wan=False
[2024-05-18 02:55:32]  domain=
[2024-05-18 02:55:32]  filesize=366788
[2024-05-18 02:55:32]  filetype=log
[2024-05-18 02:55:32]  guid=8909c2b2-38da-4872-a7b1-e0a70f767ffb
[2024-05-18 02:55:32]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-18 02:55:32]  is_tar=False
[2024-05-18 02:55:32]  lfn=log.38776104._014240.job.log.tgz.1
[2024-05-18 02:55:32]  mtime=0
[2024-05-18 02:55:32]  protocol_id=None
[2024-05-18 02:55:32]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-18 02:55:32]  replicas=None
[2024-05-18 02:55:32]  scope=mc23_13p6TeV
[2024-05-18 02:55:32]  status=None
[2024-05-18 02:55:32]  status_code=0
[2024-05-18 02:55:32]  storage_token=
[2024-05-18 02:55:32]  surl=/home/boinc/slots/0/PanDA_Pilot-6208359364/log.38776104._014240.job.log.tgz.1
[2024-05-18 02:55:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bb/e7/log.38776104._014240.job.log.tgz.1
[2024-05-18 02:55:32]  workdir=None
[2024-05-18 02:55:32] ]
[2024-05-18 02:55:32] 2024-05-18 09:54:59,982 | INFO     | transferring file log.38776104._014240.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6208359364/log.38776104._014240.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-18 02:55:32] 2024-05-18 09:54:59,983 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6208359364/log.38776104._014240.job.log.tgz.1 /home/boinc/slots/0/log.38776104._014240.job.log.t
[2024-05-18 02:55:32] 2024-05-18 09:55:00,010 | INFO     | adding to output.list: log.38776104._014240.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bb/e7/log.38776104._014240.job.log.tg
[2024-05-18 02:55:32] 2024-05-18 09:55:00,011 | INFO     | summary of transferred files:
[2024-05-18 02:55:32] 2024-05-18 09:55:00,011 | INFO     |  -- lfn=log.38776104._014240.job.log.tgz.1, status_code=0, status=transferred
[2024-05-18 02:55:32] 2024-05-18 09:55:00,011 | INFO     | stage-out finished correctly
[2024-05-18 02:55:32] 2024-05-18 09:55:02,952 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-18 02:55:32] 2024-05-18 09:55:04,394 | WARNING  | process 39427 is no longer using CPU - aborting
[2024-05-18 02:55:32] 2024-05-18 09:55:04,395 | INFO     | will not send any job update
[2024-05-18 02:55:32] 2024-05-18 09:55:04,774 | INFO     | job 6208359364 has state=finished
[2024-05-18 02:55:32] 2024-05-18 09:55:04,775 | INFO     | preparing for final server update for job 6208359364 in state='finished'
[2024-05-18 02:55:32] 2024-05-18 09:55:04,776 | INFO     | this job has now completed (state=finished)
[2024-05-18 02:55:32] 2024-05-18 09:55:04,776 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-18 02:55:32] 2024-05-18 09:55:04,776 | INFO     | job 6208359364 has finished - writing final server update
[2024-05-18 02:55:32] 2024-05-18 09:55:04,776 | INFO     | total number of processed events: 400 (read)
[2024-05-18 02:55:32] 2024-05-18 09:55:04,783 | INFO     | executing command: lscpu
[2024-05-18 02:55:32] 2024-05-18 09:55:04,830 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-18 02:55:32] 2024-05-18 09:55:04,831 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 02:55:32] 2024-05-18 09:55:04,889 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 02:55:32] 2024-05-18 09:55:06,897 | INFO     | monitor loop #306: job 0:6208359364 is in state 'finished'
[2024-05-18 02:55:32] 2024-05-18 09:55:06,897 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 02:55:32] 2024-05-18 09:55:08,969 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-18 02:55:32] 2024-05-18 09:55:08,969 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6208359364/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 02:55:32] 2024-05-18 09:55:08,971 | INFO     | extracted standard info from prmon json
[2024-05-18 02:55:32] 2024-05-18 09:55:08,971 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 02:55:32] 2024-05-18 09:55:08,971 | WARNING  | GPU info not found in prmon json
[2024-05-18 02:55:32] 2024-05-18 09:55:08,971 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 02:55:32] 2024-05-18 09:55:08,971 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 02:55:32] 2024-05-18 09:55:08,974 | INFO     | fitting pss+swap vs Time
[2024-05-18 02:55:32] 2024-05-18 09:55:08,974 | INFO     | model: linear, x: [1716022532.0, 1716022593.0, 1716022654.0, 1716022715.0, 1716022776.0, 1716022837.0, 1716022898.0, 1716022959.0, 1716023020.0, 1716023081.0, 1716
[2024-05-18 02:55:32] 2024-05-18 09:55:08,974 | INFO     | sum of square deviations: 57407588.0
[2024-05-18 02:55:32] 2024-05-18 09:55:08,974 | INFO     | sum of deviations: 16458317402.0
[2024-05-18 02:55:32] 2024-05-18 09:55:08,975 | INFO     | mean x: 1716024240.0
[2024-05-18 02:55:32] 2024-05-18 09:55:08,975 | INFO     | mean y: 2579140.6842105263
[2024-05-18 02:55:32] 2024-05-18 09:55:08,975 | INFO     | -- intersect: -491968475477.4932
[2024-05-18 02:55:32] 2024-05-18 09:55:08,975 | INFO     | intersect: -491968475477.4932
[2024-05-18 02:55:32] 2024-05-18 09:55:08,975 | INFO     | chi2: 2.2029831242693394
[2024-05-18 02:55:32] 2024-05-18 09:55:08,975 | INFO     | -- intersect: -491968475477.4932
[2024-05-18 02:55:32] 2024-05-18 09:55:08,975 | INFO     | current memory leak: 286.69 B/s (using 57 data points, chi2=2.20)
[2024-05-18 02:55:32] 2024-05-18 09:55:08,976 | INFO     | ..............................
[2024-05-18 02:55:32] 2024-05-18 09:55:08,976 | INFO     | . Timing measurements:
[2024-05-18 02:55:32] 2024-05-18 09:55:08,976 | INFO     | . get job = 0 s
[2024-05-18 02:55:32] 2024-05-18 09:55:08,976 | INFO     | . initial setup = 2 s
[2024-05-18 02:55:32] 2024-05-18 09:55:08,976 | INFO     | . payload setup = 6 s
[2024-05-18 02:55:32] 2024-05-18 09:55:08,976 | INFO     | . stage-in = 0 s
[2024-05-18 02:55:32] 2024-05-18 09:55:08,976 | INFO     | . payload execution = 3873 s
[2024-05-18 02:55:32] 2024-05-18 09:55:08,977 | INFO     | . stage-out = 0 s
[2024-05-18 02:55:32] 2024-05-18 09:55:08,977 | INFO     | . log creation = 0 s
[2024-05-18 02:55:32] 2024-05-18 09:55:08,977 | INFO     | ..............................
[2024-05-18 02:55:32] 2024-05-18 09:55:09,511 | INFO     | 
[2024-05-18 02:55:32] 2024-05-18 09:55:09,511 | INFO     | job summary report
[2024-05-18 02:55:32] 2024-05-18 09:55:09,511 | INFO     | --------------------------------------------------
[2024-05-18 02:55:32] 2024-05-18 09:55:09,512 | INFO     | PanDA job id: 6208359364
[2024-05-18 02:55:32] 2024-05-18 09:55:09,512 | INFO     | task id: 38776104
[2024-05-18 02:55:32] 2024-05-18 09:55:09,512 | INFO     | errors: (none)
[2024-05-18 02:55:32] 2024-05-18 09:55:09,512 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 02:55:32] 2024-05-18 09:55:09,512 | INFO     | pilot state: finished 
[2024-05-18 02:55:32] 2024-05-18 09:55:09,512 | INFO     | transexitcode: 0
[2024-05-18 02:55:32] 2024-05-18 09:55:09,512 | INFO     | exeerrorcode: 0
[2024-05-18 02:55:32] 2024-05-18 09:55:09,512 | INFO     | exeerrordiag: 
[2024-05-18 02:55:32] 2024-05-18 09:55:09,513 | INFO     | exitcode: 0
[2024-05-18 02:55:32] 2024-05-18 09:55:09,513 | INFO     | exitmsg: OK
[2024-05-18 02:55:32] 2024-05-18 09:55:09,513 | INFO     | cpuconsumptiontime: 34089 s
[2024-05-18 02:55:32] 2024-05-18 09:55:09,513 | INFO     | nevents: 400
[2024-05-18 02:55:32] 2024-05-18 09:55:09,513 | INFO     | neventsw: 0
[2024-05-18 02:55:32] 2024-05-18 09:55:09,513 | INFO     | pid: 39427
[2024-05-18 02:55:32] 2024-05-18 09:55:09,513 | INFO     | pgrp: 39427
[2024-05-18 02:55:32] 2024-05-18 09:55:09,513 | INFO     | corecount: 12
[2024-05-18 02:55:32] 2024-05-18 09:55:09,513 | INFO     | event service: False
[2024-05-18 02:55:32] 2024-05-18 09:55:09,513 | INFO     | sizes: {0: 2392251, 1: 2392251, 5: 2392485, 11: 2392541, 3883: 2418322, 3884: 2427276, 3887: 2427460, 3893: 2427630}
[2024-05-18 02:55:32] 2024-05-18 09:55:09,514 | INFO     | --------------------------------------------------
[2024-05-18 02:55:32] 2024-05-18 09:55:09,514 | INFO     | 
[2024-05-18 02:55:32] 2024-05-18 09:55:09,514 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 02:55:32] 2024-05-18 09:55:09,541 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 02:55:32] 2024-05-18 09:55:09,542 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 02:55:32] 2024-05-18 09:55:09,542 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 02:55:32] 2024-05-18 09:55:09,542 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 02:55:32] 2024-05-18 09:55:09,542 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 02:55:32] 2024-05-18 09:55:09,542 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 02:55:32] 2024-05-18 09:55:09,542 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 02:55:32] 2024-05-18 09:55:09,542 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 02:55:32] 2024-05-18 09:55:09,542 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 02:55:32] 2024-05-18 09:55:09,543 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 02:55:32] 2024-05-18 09:55:09,543 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 02:55:32] 2024-05-18 09:55:09,543 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 02:55:32] 2024-05-18 09:55:09,543 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 02:55:32] 2024-05-18 09:55:09,543 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 02:55:32] 2024-05-18 09:55:09,543 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 02:55:32] 2024-05-18 09:55:09,543 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 02:55:32] 2024-05-18 09:55:09,543 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 02:55:32] 2024-05-18 09:55:09,543 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 02:55:32] 2024-05-18 09:55:09,544 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 02:55:32] 2024-05-18 09:55:09,544 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 02:55:32] 2024-05-18 09:55:09,544 | INFO     | job 6208359364 has completed (purged errors)
[2024-05-18 02:55:32] 2024-05-18 09:55:09,544 | INFO     | overall cleanup function is called
[2024-05-18 02:55:32] 2024-05-18 09:55:10,552 | INFO     | --- collectZombieJob: --- 10, [39427]
[2024-05-18 02:55:32] 2024-05-18 09:55:10,553 | INFO     | zombie collector waiting for pid 39427
[2024-05-18 02:55:32] 2024-05-18 09:55:10,553 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 02:55:32] 2024-05-18 09:55:11,558 | INFO     | collected zombie processes
[2024-05-18 02:55:32] 2024-05-18 09:55:11,558 | INFO     | will now attempt to kill all subprocesses of pid=39427
[2024-05-18 02:55:32] 2024-05-18 09:55:11,746 | INFO     | process IDs to be killed: [39427] (in reverse order)
[2024-05-18 02:55:32] 2024-05-18 09:55:11,865 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 02:55:32] 2024-05-18 09:55:11,866 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 02:55:32] 2024-05-18 09:55:11,876 | INFO     | did not find any defunct processes belonging to 39427
[2024-05-18 02:55:32] 2024-05-18 09:55:11,885 | INFO     | did not find any defunct processes belonging to 39427
[2024-05-18 02:55:32] 2024-05-18 09:55:11,885 | INFO     | ready for new job
[2024-05-18 02:55:32] 2024-05-18 09:55:11,885 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 02:55:32] 2024-05-18 09:55:11,887 | INFO     | *************************************
[2024-05-18 02:55:32] 2024-05-18 09:55:11,887 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 02:55:32] 2024-05-18 09:55:11,887 | INFO     | *************************************
[2024-05-18 02:55:32] 2024-05-18 09:55:11,887 | INFO     | 
[2024-05-18 02:55:32] 2024-05-18 09:55:11,891 | INFO     | architecture information:
[2024-05-18 02:55:32] 2024-05-18 09:55:11,891 | INFO     | executing command: cat /etc/os-release
[2024-05-18 02:55:32] 2024-05-18 09:55:11,909 | INFO     | cat /etc/os-release:
[2024-05-18 02:55:32] NAME="CentOS Linux"
[2024-05-18 02:55:32] VERSION="7 (Core)"
[2024-05-18 02:55:32] ID="centos"
[2024-05-18 02:55:32] ID_LIKE="rhel fedora"
[2024-05-18 02:55:32] VERSION_ID="7"
[2024-05-18 02:55:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 02:55:32] ANSI_COLOR="0;31"
[2024-05-18 02:55:32] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 02:55:32] HOME_URL="https://www.centos.org/"
[2024-05-18 02:55:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 02:55:32] 
[2024-05-18 02:55:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 02:55:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 02:55:32] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 02:55:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 02:55:32] 
[2024-05-18 02:55:32] 2024-05-18 09:55:11,909 | INFO     | *************************************
[2024-05-18 02:55:32] 2024-05-18 09:55:12,411 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 02:55:32] 2024-05-18 09:55:12,434 | INFO     | sufficient remaining disk space (2088423653376 B)
[2024-05-18 02:55:32] 2024-05-18 09:55:12,435 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 02:55:32] 2024-05-18 09:55:12,435 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 02:55:32] 2024-05-18 09:55:12,906 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 02:55:32] 2024-05-18 09:55:12,907 | INFO     | aborting loop
[2024-05-18 02:55:32] 2024-05-18 09:55:12,968 | INFO     | all job control threads have been joined
[2024-05-18 02:55:32] 2024-05-18 09:55:13,095 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 02:55:32] 2024-05-18 09:55:13,121 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 02:55:32] 2024-05-18 09:55:13,122 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 02:55:32] 2024-05-18 09:55:13,122 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 02:55:32] 2024-05-18 09:55:13,154 | INFO     | all payload control threads have been joined
[2024-05-18 02:55:32] 2024-05-18 09:55:13,440 | INFO     | [job] retrieve thread has finished
[2024-05-18 02:55:32] 2024-05-18 09:55:13,454 | INFO     | all data control threads have been joined
[2024-05-18 02:55:32] 2024-05-18 09:55:13,457 | INFO     | [payload] failed_post thread has finished
[2024-05-18 02:55:32] 2024-05-18 09:55:13,531 | INFO     | [job] validate thread has finished
[2024-05-18 02:55:32] 2024-05-18 09:55:13,533 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 02:55:32] 2024-05-18 09:55:13,560 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 02:55:32] 2024-05-18 09:55:13,759 | INFO     | [data] copytool_in thread has finished
[2024-05-18 02:55:32] 2024-05-18 09:55:13,797 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 02:55:32] 2024-05-18 09:55:13,907 | INFO     | [job] job monitor thread has finished
[2024-05-18 02:55:32] 2024-05-18 09:55:13,974 | INFO     | [job] control thread has finished
[2024-05-18 02:55:32] 2024-05-18 09:55:14,002 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 02:55:32] 2024-05-18 09:55:14,075 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 02:55:32] 2024-05-18 09:55:14,160 | INFO     | [payload] control thread has finished
[2024-05-18 02:55:32] 2024-05-18 09:55:14,459 | INFO     | [data] control thread has finished
[2024-05-18 02:55:32] 2024-05-18 09:55:14,524 | INFO     | [payload] validate_post thread has finished
[2024-05-18 02:55:32] 2024-05-18 09:55:15,081 | INFO     | [job] queue monitor thread has finished
[2024-05-18 02:55:32] 2024-05-18 09:55:15,101 | INFO     | [data] copytool_out thread has finished
[2024-05-18 02:55:32] 2024-05-18 09:55:17,566 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 02:55:32] 2024-05-18 09:55:23,248 | INFO     | job.realtimelogging is not enabled
[2024-05-18 02:55:32] 2024-05-18 09:55:24,254 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 02:55:32] 2024-05-18 09:55:26,098 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139699037955904)>', '<ExcThread(monitor, started 139698626352896)>']
[2024-05-18 02:55:32] 2024-05-18 09:55:26,187 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 02:55:32] 2024-05-18 09:55:26,187 | INFO     | [monitor] control thread has ended
[2024-05-18 02:55:32] 2024-05-18 09:55:31,124 | INFO     | all workflow threads have been joined
[2024-05-18 02:55:32] 2024-05-18 09:55:31,124 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 02:55:32] 2024-05-18 09:55:31,124 | INFO     | traces error code: 0
[2024-05-18 02:55:32] 2024-05-18 09:55:31,124 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 02:55:32] 2024-05-18 09:55:31,203 [wrapper] ==== pilot stdout END ====
[2024-05-18 02:55:32] 2024-05-18 09:55:31,206 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 02:55:32] 2024-05-18 09:55:31,209 [wrapper] pilotpid: 30420
[2024-05-18 02:55:32] 2024-05-18 09:55:31,212 [wrapper] Pilot exit status: 0
[2024-05-18 02:55:32] 2024-05-18 09:55:31,223 [wrapper] pandaids: 6208359364
[2024-05-18 02:55:32] 2024-05-18 09:55:31,318 [wrapper] cleanup: SIGTERM to supervisor_pilot  76860 30421
[2024-05-18 02:55:32] 2024-05-18 09:55:31,320 [wrapper] Test setup, not cleaning
[2024-05-18 02:55:32] 2024-05-18 09:55:31,323 [wrapper] ==== wrapper stdout END ====
[2024-05-18 02:55:32] 2024-05-18 09:55:31,325 [wrapper] ==== wrapper stderr END ====
[2024-05-18 02:55:32] 2024-05-18 09:55:31,329 [wrapper] apfmon messages muted
[2024-05-18 02:55:32]  *** Error codes and diagnostics ***
[2024-05-18 02:55:32]     "exeErrorCode": 0,
[2024-05-18 02:55:32]     "exeErrorDiag": "",
[2024-05-18 02:55:32]     "pilotErrorCode": 0,
[2024-05-18 02:55:32]     "pilotErrorDiag": "",
[2024-05-18 02:55:32]  *** Listing of results directory ***
[2024-05-18 02:55:32] total 812356
[2024-05-18 02:55:32] -rw-r--r-- 1 boinc boinc    467845 May 17 13:55 pilot3.tar.gz
[2024-05-18 02:55:32] -rw-r--r-- 1 boinc boinc      5633 May 17 14:19 queuedata.json
[2024-05-18 02:55:32] -rwx------ 1 boinc boinc     32251 May 17 14:19 runpilot2-wrapper.sh
[2024-05-18 02:55:32] -rw-r--r-- 1 boinc boinc       100 May 18 01:49 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 02:55:32] -rwxr-xr-x 1 boinc boinc      7986 May 18 01:49 run_atlas
[2024-05-18 02:55:32] -rw-r--r-- 1 boinc boinc       105 May 18 01:49 job.xml
[2024-05-18 02:55:32] -rw-r--r-- 2 boinc boinc 600012516 May 18 01:49 EVNT.38776100._000186.pool.root.1
[2024-05-18 02:55:32] -rw-r--r-- 1 boinc boinc      6622 May 18 01:49 init_data.xml
[2024-05-18 02:55:32] -rw-r--r-- 2 boinc boinc     17537 May 18 01:49 start_atlas.sh
[2024-05-18 02:55:32] drwxrwx--x 2 boinc boinc      4096 May 18 01:49 shared
[2024-05-18 02:55:32] -rw-r--r-- 2 boinc boinc    480008 May 18 01:49 input.tar.gz
[2024-05-18 02:55:32] -rw-r--r-- 1 boinc boinc         0 May 18 01:49 boinc_lockfile
[2024-05-18 02:55:32] -rw-r--r-- 1 boinc boinc      2643 May 18 01:49 pandaJob.out
[2024-05-18 02:55:32] -rw------- 1 boinc boinc       424 May 18 01:49 setup.sh.local
[2024-05-18 02:55:32] -rw------- 1 boinc boinc   1019073 May 18 01:49 agis_schedconf.cvmfs.json
[2024-05-18 02:55:32] -rw------- 1 boinc boinc         0 May 18 01:50 agis_ddmendpoints.agis.ALL.json
[2024-05-18 02:55:32] -rw------- 1 boinc boinc   1324701 May 18 01:50 cric_ddmendpoints.json
[2024-05-18 02:55:32] drwx------ 4 boinc boinc      4096 May 18 01:50 pilot3
[2024-05-18 02:55:32] -rw------- 1 boinc boinc 226784149 May 18 02:54 HITS.38776104._014240.pool.root.1
[2024-05-18 02:55:32] -rw-r--r-- 1 boinc boinc       530 May 18 02:54 boinc_task_state.xml
[2024-05-18 02:55:32] -rw------- 1 boinc boinc      1059 May 18 02:54 memory_monitor_summary.json
[2024-05-18 02:55:32] -rw------- 1 boinc boinc    366788 May 18 02:54 log.38776104._014240.job.log.tgz.1
[2024-05-18 02:55:32] -rw------- 1 boinc boinc      7776 May 18 02:55 heartbeat.json
[2024-05-18 02:55:32] -rw------- 1 boinc boinc        95 May 18 02:55 pilot_heartbeat.json
[2024-05-18 02:55:32] -rw-r--r-- 1 boinc boinc      8192 May 18 02:55 boinc_mmap_file
[2024-05-18 02:55:32] -rw-r--r-- 1 boinc boinc        27 May 18 02:55 wrapper_checkpoint.txt
[2024-05-18 02:55:32] -rw------- 1 boinc boinc      4282 May 18 02:55 pilotlog.txt
[2024-05-18 02:55:32] -rw------- 1 boinc boinc    395820 May 18 02:55 log.38776104._014240.job.log.1
[2024-05-18 02:55:32] -rw------- 1 boinc boinc       357 May 18 02:55 output.list
[2024-05-18 02:55:32] -rw-r--r-- 1 boinc boinc       620 May 18 02:55 runtime_log
[2024-05-18 02:55:32] -rw------- 1 boinc boinc    778240 May 18 02:55 result.tar.gz
[2024-05-18 02:55:32] -rw------- 1 boinc boinc       651 May 18 02:55 ZdAMDmbAKS5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmqULKDmTy7KJm.diag
[2024-05-18 02:55:32] -rw-r--r-- 1 boinc boinc     11286 May 18 02:55 runtime_log.err
[2024-05-18 02:55:32] -rw-r--r-- 1 boinc boinc     21369 May 18 02:55 stderr.txt
[2024-05-18 02:55:32] HITS file was successfully produced:
[2024-05-18 02:55:32] -rw------- 1 boinc boinc 226784149 May 18 02:54 shared/HITS.pool.root.1
[2024-05-18 02:55:32]  *** Contents of shared directory: ***
[2024-05-18 02:55:32] total 808684
[2024-05-18 02:55:32] -rw-r--r-- 2 boinc boinc 600012516 May 18 01:49 ATLAS.root_0
[2024-05-18 02:55:32] -rw-r--r-- 2 boinc boinc     17537 May 18 01:49 start_atlas.sh
[2024-05-18 02:55:32] -rw-r--r-- 2 boinc boinc    480008 May 18 01:49 input.tar.gz
[2024-05-18 02:55:32] -rw------- 1 boinc boinc 226784149 May 18 02:54 HITS.pool.root.1
[2024-05-18 02:55:32] -rw------- 1 boinc boinc    778240 May 18 02:55 result.tar.gz
02:55:33 (26178): run_atlas exited; CPU time 33920.163533
02:55:33 (26178): called boinc_finish(0)

</stderr_txt>
]]>

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