Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:04:43 (3475498): wrapper (7.7.26015): starting
18:04:43 (3475498): wrapper: running run_atlas (--nthreads 4)
[2024-05-20 18:04:43] Arguments: --nthreads 4
[2024-05-20 18:04:43] Threads: 4
[2024-05-20 18:04:43] Checking for CVMFS
[2024-05-20 18:04:43] No cvmfs_config command found, will try listing directly
[2024-05-20 18:04:43] CVMFS is ok
[2024-05-20 18:04:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-20 18:04:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-20 18:04:43] Further information can be found at the LHC@home message board.
[2024-05-20 18:04:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-20 18:04:43] Checking for apptainer binary...
[2024-05-20 18:04:43] which: no apptainer in ((null))
[2024-05-20 18:04:43] apptainer is not installed, using version from CVMFS
[2024-05-20 18:04:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-20 18:04:44] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2024-05-20 18:04:44] apptainer works
[2024-05-20 18:04:44] Set ATHENA_PROC_NUMBER=4
[2024-05-20 18:04:44] Set ATHENA_CORE_NUMBER=4
[2024-05-20 18:04:44] Starting ATLAS job with PandaID=6208358187
[2024-05-20 18:04:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-21 07:03:21]  *** The last 200 lines of the pilot log: ***
[2024-05-21 07:03:21] 2024-05-21 05:03:04,453 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-21 07:03:21] 2024-05-21 05:03:04,511 | INFO     | job 6208358187 has state=finished
[2024-05-21 07:03:21] 2024-05-21 05:03:04,512 | INFO     | preparing for final server update for job 6208358187 in state='finished'
[2024-05-21 07:03:21] 2024-05-21 05:03:04,513 | INFO     | this job has now completed (state=finished)
[2024-05-21 07:03:21] 2024-05-21 05:03:04,513 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-21 07:03:21] 2024-05-21 05:03:04,513 | INFO     | job 6208358187 has finished - writing final server update
[2024-05-21 07:03:21] 2024-05-21 05:03:04,513 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1646121/.job.ad'
[2024-05-21 07:03:21] 2024-05-21 05:03:04,513 | INFO     | total number of processed events: 1850 (read)
[2024-05-21 07:03:21] 2024-05-21 05:03:04,517 | INFO     | executing command: lscpu
[2024-05-21 07:03:21] 2024-05-21 05:03:04,616 | WARNING  | process 3488245 is no longer using CPU - aborting
[2024-05-21 07:03:21] 2024-05-21 05:03:04,617 | INFO     | will not send any job update
[2024-05-21 07:03:21] 2024-05-21 05:03:04,655 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-05-21 07:03:21] 2024-05-21 05:03:04,655 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-21 07:03:21] 2024-05-21 05:03:04,690 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-21 07:03:21] 2024-05-21 05:03:07,122 | INFO     | monitor loop #3588: job 0:6208358187 is in state 'finished'
[2024-05-21 07:03:21] 2024-05-21 05:03:07,123 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-21 07:03:21] 2024-05-21 05:03:07,739 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-21 07:03:21] 2024-05-21 05:03:07,739 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6208358187/memory_monitor_summary.json (trf name=prmon)
[2024-05-21 07:03:21] 2024-05-21 05:03:07,740 | INFO     | extracted standard info from prmon json
[2024-05-21 07:03:21] 2024-05-21 05:03:07,740 | INFO     | extracted standard memory fields from prmon json
[2024-05-21 07:03:21] 2024-05-21 05:03:07,740 | WARNING  | GPU info not found in prmon json
[2024-05-21 07:03:21] 2024-05-21 05:03:07,748 | INFO     | fitting pss+swap vs Time
[2024-05-21 07:03:21] 2024-05-21 05:03:07,748 | INFO     | model: linear, x: [1716221120.0, 1716221181.0, 1716221242.0, 1716221303.0, 1716221364.0, 1716221425.0, 1716221486.0, 1716221547.0, 1716221608.0, 1716221669.0, 1716
[2024-05-21 07:03:21] 2024-05-21 05:03:07,748 | INFO     | sum of square deviations: 138823179630.0
[2024-05-21 07:03:21] 2024-05-21 05:03:07,756 | INFO     | sum of deviations: 1232943441892.0002
[2024-05-21 07:03:21] 2024-05-21 05:03:07,756 | INFO     | mean x: 1716244422.0
[2024-05-21 07:03:21] 2024-05-21 05:03:07,756 | INFO     | mean y: 2612547.4026143793
[2024-05-21 07:03:21] 2024-05-21 05:03:07,756 | INFO     | -- intersect: -15240031443.524584
[2024-05-21 07:03:21] 2024-05-21 05:03:07,756 | INFO     | intersect: -15240031443.524584
[2024-05-21 07:03:21] 2024-05-21 05:03:07,757 | INFO     | chi2: 14.316946228058901
[2024-05-21 07:03:21] 2024-05-21 05:03:07,757 | INFO     | model: linear, x: [1716221120.0, 1716221181.0, 1716221242.0, 1716221303.0, 1716221364.0, 1716221425.0, 1716221486.0, 1716221547.0, 1716221608.0, 1716221669.0, 1716
[2024-05-21 07:03:21] 2024-05-21 05:03:07,758 | INFO     | sum of square deviations: 136118905670.0
[2024-05-21 07:03:21] 2024-05-21 05:03:07,765 | INFO     | sum of deviations: 1449917243814.5
[2024-05-21 07:03:21] 2024-05-21 05:03:07,765 | INFO     | mean x: 1716244269.5
[2024-05-21 07:03:21] 2024-05-21 05:03:07,765 | INFO     | mean y: 2624785.232894737
[2024-05-21 07:03:21] 2024-05-21 05:03:07,765 | INFO     | -- intersect: -18278540117.595917
[2024-05-21 07:03:21] 2024-05-21 05:03:07,765 | INFO     | intersect: -18278540117.595917
[2024-05-21 07:03:21] 2024-05-21 05:03:07,766 | INFO     | chi2: 11.669632449944588
[2024-05-21 07:03:21] 2024-05-21 05:03:07,766 | INFO     | current chi2=11.669632449944588 (change=18.490771257672296 %)
[2024-05-21 07:03:21] 2024-05-21 05:03:07,766 | INFO     | right removable region: 759
[2024-05-21 07:03:21] 2024-05-21 05:03:07,766 | INFO     | model: linear, x: [1716221425.0, 1716221486.0, 1716221547.0, 1716221608.0, 1716221669.0, 1716221730.0, 1716221791.0, 1716221852.0, 1716221913.0, 1716221974.0, 1716
[2024-05-21 07:03:21] 2024-05-21 05:03:07,767 | INFO     | sum of square deviations: 136118905670.0
[2024-05-21 07:03:21] 2024-05-21 05:03:07,784 | INFO     | sum of deviations: 997346454680.0002
[2024-05-21 07:03:21] 2024-05-21 05:03:07,784 | INFO     | mean x: 1716244574.5
[2024-05-21 07:03:21] 2024-05-21 05:03:07,785 | INFO     | mean y: 2625825.431578947
[2024-05-21 07:03:21] 2024-05-21 05:03:07,785 | INFO     | -- intersect: -12572338932.888613
[2024-05-21 07:03:21] 2024-05-21 05:03:07,785 | INFO     | intersect: -12572338932.888613
[2024-05-21 07:03:21] 2024-05-21 05:03:07,786 | INFO     | chi2: 11.13067672911032
[2024-05-21 07:03:21] 2024-05-21 05:03:07,786 | INFO     | current chi2=11.13067672911032 (change=22.255231305569957 %)
[2024-05-21 07:03:21] 2024-05-21 05:03:07,787 | INFO     | left removable region: 10
[2024-05-21 07:03:21] 2024-05-21 05:03:07,788 | INFO     | model: linear, x: [1716221730.0, 1716221791.0, 1716221852.0, 1716221913.0, 1716221974.0, 1716222035.0, 1716222096.0, 1716222157.0, 1716222218.0, 1716222279.0, 1716
[2024-05-21 07:03:21] 2024-05-21 05:03:07,788 | INFO     | sum of square deviations: 130293605750.0
[2024-05-21 07:03:21] 2024-05-21 05:03:07,795 | INFO     | sum of deviations: 1075742377462.0
[2024-05-21 07:03:21] 2024-05-21 05:03:07,796 | INFO     | mean x: 1716244544.0
[2024-05-21 07:03:21] 2024-05-21 05:03:07,796 | INFO     | mean y: 2651929.0173564753
[2024-05-21 07:03:21] 2024-05-21 05:03:07,796 | INFO     | -- intersect: -14167168419.735607
[2024-05-21 07:03:21] 2024-05-21 05:03:07,796 | INFO     | intersect: -14167168419.735607
[2024-05-21 07:03:21] 2024-05-21 05:03:07,796 | INFO     | chi2: 5.923510091594983
[2024-05-21 07:03:21] 2024-05-21 05:03:07,796 | INFO     | -- intersect: -14167168419.735607
[2024-05-21 07:03:21] 2024-05-21 05:03:07,796 | INFO     | current memory leak: 8.26 B/s (using 749 data points, chi2=5.92)
[2024-05-21 07:03:21] 2024-05-21 05:03:07,797 | INFO     | ..............................
[2024-05-21 07:03:21] 2024-05-21 05:03:07,797 | INFO     | . Timing measurements:
[2024-05-21 07:03:21] 2024-05-21 05:03:07,797 | INFO     | . get job = 0 s
[2024-05-21 07:03:21] 2024-05-21 05:03:07,797 | INFO     | . initial setup = 1 s
[2024-05-21 07:03:21] 2024-05-21 05:03:07,797 | INFO     | . payload setup = 9 s
[2024-05-21 07:03:21] 2024-05-21 05:03:07,797 | INFO     | . stage-in = 0 s
[2024-05-21 07:03:21] 2024-05-21 05:03:07,797 | INFO     | . payload execution = 46661 s
[2024-05-21 07:03:21] 2024-05-21 05:03:07,797 | INFO     | . stage-out = 2 s
[2024-05-21 07:03:21] 2024-05-21 05:03:07,797 | INFO     | . log creation = 0 s
[2024-05-21 07:03:21] 2024-05-21 05:03:07,797 | INFO     | ..............................
[2024-05-21 07:03:21] 2024-05-21 05:03:07,851 | INFO     | 
[2024-05-21 07:03:21] 2024-05-21 05:03:07,852 | INFO     | job summary report
[2024-05-21 07:03:21] 2024-05-21 05:03:07,852 | INFO     | --------------------------------------------------
[2024-05-21 07:03:21] 2024-05-21 05:03:07,852 | INFO     | PanDA job id: 6208358187
[2024-05-21 07:03:21] 2024-05-21 05:03:07,852 | INFO     | task id: 38734053
[2024-05-21 07:03:21] 2024-05-21 05:03:07,852 | INFO     | errors: (none)
[2024-05-21 07:03:21] 2024-05-21 05:03:07,852 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-21 07:03:21] 2024-05-21 05:03:07,852 | INFO     | pilot state: finished 
[2024-05-21 07:03:21] 2024-05-21 05:03:07,852 | INFO     | transexitcode: 0
[2024-05-21 07:03:21] 2024-05-21 05:03:07,852 | INFO     | exeerrorcode: 0
[2024-05-21 07:03:21] 2024-05-21 05:03:07,852 | INFO     | exeerrordiag: 
[2024-05-21 07:03:21] 2024-05-21 05:03:07,852 | INFO     | exitcode: 0
[2024-05-21 07:03:21] 2024-05-21 05:03:07,852 | INFO     | exitmsg: OK
[2024-05-21 07:03:21] 2024-05-21 05:03:07,852 | INFO     | cpuconsumptiontime: 180579 s
[2024-05-21 07:03:21] 2024-05-21 05:03:07,852 | INFO     | nevents: 1850
[2024-05-21 07:03:21] 2024-05-21 05:03:07,852 | INFO     | neventsw: 0
[2024-05-21 07:03:21] 2024-05-21 05:03:07,852 | INFO     | pid: 3488245
[2024-05-21 07:03:21] 2024-05-21 05:03:07,852 | INFO     | pgrp: 3488245
[2024-05-21 07:03:21] 2024-05-21 05:03:07,852 | INFO     | corecount: 4
[2024-05-21 07:03:21] 2024-05-21 05:03:07,852 | INFO     | event service: False
[2024-05-21 07:03:21] 2024-05-21 05:03:07,852 | INFO     | sizes: {0: 2392650, 4: 2392856, 11: 2392884, 46674: 2458919, 46677: 2467957, 46681: 2468123}
[2024-05-21 07:03:21] 2024-05-21 05:03:07,852 | INFO     | --------------------------------------------------
[2024-05-21 07:03:21] 2024-05-21 05:03:07,852 | INFO     | 
[2024-05-21 07:03:21] 2024-05-21 05:03:07,853 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2024-05-21 07:03:21] 2024-05-21 05:03:07,868 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-21 07:03:21] 2024-05-21 05:03:07,868 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-21 07:03:21] 2024-05-21 05:03:07,868 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-21 07:03:21] 2024-05-21 05:03:07,868 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-21 07:03:21] 2024-05-21 05:03:07,869 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-21 07:03:21] 2024-05-21 05:03:07,869 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-21 07:03:21] 2024-05-21 05:03:07,869 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-21 07:03:21] 2024-05-21 05:03:07,869 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-21 07:03:21] 2024-05-21 05:03:07,869 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-21 07:03:21] 2024-05-21 05:03:07,869 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-21 07:03:21] 2024-05-21 05:03:07,869 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-21 07:03:21] 2024-05-21 05:03:07,869 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-21 07:03:21] 2024-05-21 05:03:07,869 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-21 07:03:21] 2024-05-21 05:03:07,869 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-21 07:03:21] 2024-05-21 05:03:07,869 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-21 07:03:21] 2024-05-21 05:03:07,869 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-21 07:03:21] 2024-05-21 05:03:07,869 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-21 07:03:21] 2024-05-21 05:03:07,869 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-21 07:03:21] 2024-05-21 05:03:07,869 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-21 07:03:21] 2024-05-21 05:03:07,869 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-21 07:03:21] 2024-05-21 05:03:07,869 | INFO     | job 6208358187 has completed (purged errors)
[2024-05-21 07:03:21] 2024-05-21 05:03:07,869 | INFO     | overall cleanup function is called
[2024-05-21 07:03:21] 2024-05-21 05:03:08,877 | INFO     | --- collectZombieJob: --- 10, [3488245]
[2024-05-21 07:03:21] 2024-05-21 05:03:08,878 | INFO     | zombie collector waiting for pid 3488245
[2024-05-21 07:03:21] 2024-05-21 05:03:08,878 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-21 07:03:21] 2024-05-21 05:03:09,879 | INFO     | collected zombie processes
[2024-05-21 07:03:21] 2024-05-21 05:03:09,880 | INFO     | will now attempt to kill all subprocesses of pid=3488245
[2024-05-21 07:03:21] 2024-05-21 05:03:10,032 | INFO     | process IDs to be killed: [3488245] (in reverse order)
[2024-05-21 07:03:21] 2024-05-21 05:03:10,127 | WARNING  | found no corresponding commands to process id(s)
[2024-05-21 07:03:21] 2024-05-21 05:03:10,127 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-21 07:03:21] 2024-05-21 05:03:10,134 | INFO     | did not find any defunct processes belonging to 3488245
[2024-05-21 07:03:21] 2024-05-21 05:03:10,141 | INFO     | did not find any defunct processes belonging to 3488245
[2024-05-21 07:03:21] 2024-05-21 05:03:10,141 | INFO     | ready for new job
[2024-05-21 07:03:21] 2024-05-21 05:03:10,141 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-21 07:03:21] 2024-05-21 05:03:10,144 | INFO     | *************************************
[2024-05-21 07:03:21] 2024-05-21 05:03:10,144 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-21 07:03:21] 2024-05-21 05:03:10,145 | INFO     | *************************************
[2024-05-21 07:03:21] 2024-05-21 05:03:10,145 | INFO     | 
[2024-05-21 07:03:21] 2024-05-21 05:03:10,147 | INFO     | architecture information:
[2024-05-21 07:03:21] 2024-05-21 05:03:10,148 | INFO     | executing command: cat /etc/os-release
[2024-05-21 07:03:21] 2024-05-21 05:03:10,163 | INFO     | cat /etc/os-release:
[2024-05-21 07:03:21] NAME="CentOS Linux"
[2024-05-21 07:03:21] VERSION="7 (Core)"
[2024-05-21 07:03:21] ID="centos"
[2024-05-21 07:03:21] ID_LIKE="rhel fedora"
[2024-05-21 07:03:21] VERSION_ID="7"
[2024-05-21 07:03:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-21 07:03:21] ANSI_COLOR="0;31"
[2024-05-21 07:03:21] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-21 07:03:21] HOME_URL="https://www.centos.org/"
[2024-05-21 07:03:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-21 07:03:21] 
[2024-05-21 07:03:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-21 07:03:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-21 07:03:21] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-21 07:03:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-21 07:03:21] 
[2024-05-21 07:03:21] 2024-05-21 05:03:10,163 | INFO     | *************************************
[2024-05-21 07:03:21] 2024-05-21 05:03:10,666 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2024-05-21 07:03:21] 2024-05-21 05:03:10,686 | INFO     | sufficient remaining disk space (585804808192 B)
[2024-05-21 07:03:21] 2024-05-21 05:03:10,687 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-21 07:03:21] 2024-05-21 05:03:10,687 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-21 07:03:21] 2024-05-21 05:03:10,687 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-21 07:03:21] 2024-05-21 05:03:10,687 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-21 07:03:21] 2024-05-21 05:03:10,688 | INFO     | aborting loop
[2024-05-21 07:03:21] 2024-05-21 05:03:10,745 | INFO     | all data control threads have been joined
[2024-05-21 07:03:21] 2024-05-21 05:03:11,140 | INFO     | all payload control threads have been joined
[2024-05-21 07:03:21] 2024-05-21 05:03:11,521 | INFO     | found 0 job(s) in 20 queues
[2024-05-21 07:03:21] 2024-05-21 05:03:11,522 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-21 07:03:21] 2024-05-21 05:03:11,522 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-21 07:03:21] 2024-05-21 05:03:11,692 | INFO     | [job] retrieve thread has finished
[2024-05-21 07:03:21] 2024-05-21 05:03:11,693 | INFO     | [job] job monitor thread has finished
[2024-05-21 07:03:21] 2024-05-21 05:03:11,750 | INFO     | [data] control thread has finished
[2024-05-21 07:03:21] 2024-05-21 05:03:11,793 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-21 07:03:21] 2024-05-21 05:03:11,889 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-21 07:03:21] 2024-05-21 05:03:11,961 | INFO     | all job control threads have been joined
[2024-05-21 07:03:21] 2024-05-21 05:03:12,093 | INFO     | [payload] validate_post thread has finished
[2024-05-21 07:03:21] 2024-05-21 05:03:12,146 | INFO     | [payload] control thread has finished
[2024-05-21 07:03:21] 2024-05-21 05:03:12,312 | INFO     | [job] validate thread has finished
[2024-05-21 07:03:21] 2024-05-21 05:03:12,537 | INFO     | [payload] failed_post thread has finished
[2024-05-21 07:03:21] 2024-05-21 05:03:12,776 | INFO     | [data] copytool_in thread has finished
[2024-05-21 07:03:21] 2024-05-21 05:03:12,862 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-21 07:03:21] 2024-05-21 05:03:12,922 | INFO     | [payload] execute_payloads thread has finished
[2024-05-21 07:03:21] 2024-05-21 05:03:12,967 | INFO     | [job] control thread has finished
[2024-05-21 07:03:21] 2024-05-21 05:03:13,078 | INFO     | [job] create_data_payload thread has finished
[2024-05-21 07:03:21] 2024-05-21 05:03:13,080 | INFO     | [payload] validate_pre thread has finished
[2024-05-21 07:03:21] 2024-05-21 05:03:13,798 | INFO     | [data] copytool_out thread has finished
[2024-05-21 07:03:21] 2024-05-21 05:03:13,867 | INFO     | [job] queue monitor thread has finished
[2024-05-21 07:03:21] 2024-05-21 05:03:14,693 | INFO     | [data] queue_monitor thread has finished
[2024-05-21 07:03:21] 2024-05-21 05:03:15,288 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47047886287936)>', '<ExcThread(monitor, started 47048059639552)>']
[2024-05-21 07:03:21] 2024-05-21 05:03:15,541 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-21 07:03:21] 2024-05-21 05:03:15,542 | INFO     | [monitor] control thread has ended
[2024-05-21 07:03:21] 2024-05-21 05:03:20,313 | INFO     | all workflow threads have been joined
[2024-05-21 07:03:21] 2024-05-21 05:03:20,314 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-21 07:03:21] 2024-05-21 05:03:20,314 | INFO     | traces error code: 0
[2024-05-21 07:03:21] 2024-05-21 05:03:20,314 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-21 07:03:21] 2024-05-21 05:03:20,387 [wrapper] ==== pilot stdout END ====
[2024-05-21 07:03:21] 2024-05-21 05:03:20,390 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-21 07:03:21] 2024-05-21 05:03:20,392 [wrapper] pilotpid: 3480211
[2024-05-21 07:03:21] 2024-05-21 05:03:20,394 [wrapper] Pilot exit status: 0
[2024-05-21 07:03:21] 2024-05-21 05:03:20,402 [wrapper] pandaids: 6208358187
[2024-05-21 07:03:21] 2024-05-21 05:03:20,468 [wrapper] cleanup: SIGTERM to supervisor_pilot  803368 3480212
[2024-05-21 07:03:21] 2024-05-21 05:03:20,471 [wrapper] Test setup, not cleaning
[2024-05-21 07:03:21] 2024-05-21 05:03:20,473 [wrapper] ==== wrapper stdout END ====
[2024-05-21 07:03:21] 2024-05-21 05:03:20,474 [wrapper] ==== wrapper stderr END ====
[2024-05-21 07:03:21] 2024-05-21 05:03:20,478 [wrapper] apfmon messages muted
[2024-05-21 07:03:21]  *** Error codes and diagnostics ***
[2024-05-21 07:03:21]     "exeErrorCode": 0,
[2024-05-21 07:03:21]     "exeErrorDiag": "",
[2024-05-21 07:03:21]     "pilotErrorCode": 0,
[2024-05-21 07:03:21]     "pilotErrorDiag": "",
[2024-05-21 07:03:21]  *** Listing of results directory ***
[2024-05-21 07:03:21] total 1450484
[2024-05-21 07:03:21] -rw-r--r-- 1 boinc boinc     467845 May 17 22:55 pilot3.tar.gz
[2024-05-21 07:03:21] -rwx------ 1 boinc boinc      32251 May 17 22:57 runpilot2-wrapper.sh
[2024-05-21 07:03:21] -rw-r--r-- 1 boinc boinc       5633 May 17 22:57 queuedata.json
[2024-05-21 07:03:21] -rw-r--r-- 1 boinc boinc        100 May 20 18:04 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-21 07:03:21] -rwxr-xr-x 1 boinc boinc       7986 May 20 18:04 run_atlas
[2024-05-21 07:03:21] -rw-r--r-- 1 boinc boinc        105 May 20 18:04 job.xml
[2024-05-21 07:03:21] -rw-r--r-- 2 boinc boinc  329612541 May 20 18:04 EVNT.38734051._000627.pool.root.1
[2024-05-21 07:03:21] -rw-r--r-- 1 boinc boinc       6663 May 20 18:04 init_data.xml
[2024-05-21 07:03:21] -rw-r--r-- 2 boinc boinc      17537 May 20 18:04 start_atlas.sh
[2024-05-21 07:03:21] drwxrwx--x 2 boinc boinc       4096 May 20 18:04 shared
[2024-05-21 07:03:21] -rw-r--r-- 2 boinc boinc     480166 May 20 18:04 input.tar.gz
[2024-05-21 07:03:21] -rw-r--r-- 1 boinc boinc          0 May 20 18:04 boinc_lockfile
[2024-05-21 07:03:21] -rw-r--r-- 1 boinc boinc       2852 May 20 18:04 pandaJob.out
[2024-05-21 07:03:21] -rw------- 1 boinc boinc        424 May 20 18:04 setup.sh.local
[2024-05-21 07:03:21] -rw------- 1 boinc boinc    1013977 May 20 18:04 agis_schedconf.cvmfs.json
[2024-05-21 07:03:21] -rw------- 1 boinc boinc    1324701 May 20 18:04 cric_ddmendpoints.json
[2024-05-21 07:03:21] drwx------ 4 boinc boinc       4096 May 20 18:04 pilot3
[2024-05-21 07:03:21] -rw-r--r-- 1 boinc boinc        533 May 21 06:54 boinc_task_state.xml
[2024-05-21 07:03:21] -rw------- 1 boinc boinc 1137411616 May 21 07:02 HITS.38734053._008174.pool.root.1
[2024-05-21 07:03:21] -rw------- 1 boinc boinc         95 May 21 07:02 pilot_heartbeat.json
[2024-05-21 07:03:21] -rw------- 1 boinc boinc       1060 May 21 07:02 memory_monitor_summary.json
[2024-05-21 07:03:21] -rw------- 1 boinc boinc          0 May 21 07:03 agis_ddmendpoints.agis.ALL.json
[2024-05-21 07:03:21] -rw------- 1 boinc boinc    1667048 May 21 07:03 log.38734053._008174.job.log.tgz.1
[2024-05-21 07:03:21] -rw------- 1 boinc boinc      27790 May 21 07:03 heartbeat.json
[2024-05-21 07:03:21] -rw-r--r-- 1 boinc boinc       8192 May 21 07:03 boinc_mmap_file
[2024-05-21 07:03:21] -rw-r--r-- 1 boinc boinc         29 May 21 07:03 wrapper_checkpoint.txt
[2024-05-21 07:03:21] -rw------- 1 boinc boinc       4221 May 21 07:03 pilotlog.txt
[2024-05-21 07:03:21] -rw------- 1 boinc boinc    5684520 May 21 07:03 log.38734053._008174.job.log.1
[2024-05-21 07:03:21] -rw------- 1 boinc boinc        353 May 21 07:03 output.list
[2024-05-21 07:03:21] -rw-r--r-- 1 boinc boinc        620 May 21 07:03 runtime_log
[2024-05-21 07:03:21] -rw------- 1 boinc boinc    7393280 May 21 07:03 result.tar.gz
[2024-05-21 07:03:21] -rw-r--r-- 1 boinc boinc      11410 May 21 07:03 runtime_log.err
[2024-05-21 07:03:21] -rw------- 1 boinc boinc        663 May 21 07:03 ouRMDmTpJS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmLYRKDmdojh7m.diag
[2024-05-21 07:03:21] -rw-r--r-- 1 boinc boinc      21612 May 21 07:03 stderr.txt
[2024-05-21 07:03:21] HITS file was successfully produced:
[2024-05-21 07:03:21] -rw------- 1 boinc boinc 1137411616 May 21 07:02 shared/HITS.pool.root.1
[2024-05-21 07:03:21]  *** Contents of shared directory: ***
[2024-05-21 07:03:21] total 1440364
[2024-05-21 07:03:21] -rw-r--r-- 2 boinc boinc  329612541 May 20 18:04 ATLAS.root_0
[2024-05-21 07:03:21] -rw-r--r-- 2 boinc boinc      17537 May 20 18:04 start_atlas.sh
[2024-05-21 07:03:21] -rw-r--r-- 2 boinc boinc     480166 May 20 18:04 input.tar.gz
[2024-05-21 07:03:21] -rw------- 1 boinc boinc 1137411616 May 21 07:02 HITS.pool.root.1
[2024-05-21 07:03:21] -rw------- 1 boinc boinc    7393280 May 21 07:03 result.tar.gz
07:03:22 (3475498): run_atlas exited; CPU time 178291.975198
07:03:22 (3475498): called boinc_finish(0)

</stderr_txt>
]]>

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