Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2024-05-18 16:44:57 (11151): Detected: vboxwrapper 26206
2024-05-18 16:44:57 (11151): Detected: BOINC client v7.24.1
2024-05-18 16:44:57 (11151): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2024-05-18 16:44:57 (11151): Successfully copied 'init_data.xml' to the shared directory.
2024-05-18 16:44:58 (11151): Create VM. (boinc_91e41393c2737061, slot#8)
2024-05-18 16:44:58 (11151): Setting Memory Size for VM. (4300MB)
2024-05-18 16:44:58 (11151): Setting CPU Count for VM. (3)
2024-05-18 16:44:58 (11151): Setting Chipset Options for VM.
2024-05-18 16:44:58 (11151): Setting Graphics Controller Options for VM.
2024-05-18 16:44:58 (11151): Setting Boot Options for VM.
2024-05-18 16:44:58 (11151): Setting Network Configuration for NAT.
2024-05-18 16:44:59 (11151): Enabling VM Network Access.
2024-05-18 16:44:59 (11151): Disabling USB Support for VM.
2024-05-18 16:44:59 (11151): Disabling COM Port Support for VM.
2024-05-18 16:44:59 (11151): Disabling LPT Port Support for VM.
2024-05-18 16:44:59 (11151): Disabling Audio Support for VM.
2024-05-18 16:44:59 (11151): Disabling Clipboard Support for VM.
2024-05-18 16:44:59 (11151): Disabling Drag and Drop Support for VM.
2024-05-18 16:45:00 (11151): Adding storage controller(s) to VM.
2024-05-18 16:45:00 (11151): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-05-18 16:45:02 (11151): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-05-18 16:45:02 (11151): forwarding host port 35885 to guest port 80
2024-05-18 16:45:02 (11151): Enabling remote desktop for VM.
2024-05-18 16:45:02 (11151): Required extension pack not installed, remote desktop not enabled.
2024-05-18 16:45:02 (11151): Enabling shared directory for VM.
2024-05-18 16:45:02 (11151): Starting VM using VBoxManage interface. (boinc_91e41393c2737061, slot#8)
2024-05-18 16:45:04 (11151): Successfully started VM. (PID = '11414')
2024-05-18 16:45:04 (11151): Reporting VM Process ID to BOINC.
2024-05-18 16:45:04 (11151): Guest Log: BIOS: VirtualBox 7.0.18
2024-05-18 16:45:04 (11151): Guest Log: CPUID EDX: 0x178bfbff
2024-05-18 16:45:04 (11151): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-05-18 16:45:04 (11151): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-05-18 16:45:04 (11151): VM state change detected. (old = 'poweredoff', new = 'running')
2024-05-18 16:45:04 (11151): Detected: Web Application Enabled (http://localhost:35885)
2024-05-18 16:45:04 (11151): Preference change detected
2024-05-18 16:45:04 (11151): Setting CPU throttle for VM. (100%)
2024-05-18 16:45:04 (11151): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-05-18 16:45:06 (11151): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-05-18 16:45:06 (11151): Guest Log: BIOS: Booting from Hard Disk...
2024-05-18 16:45:09 (11151): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-05-18 16:45:09 (11151): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-05-18 16:45:09 (11151): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-05-18 16:45:09 (11151): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-05-18 16:45:09 (11151): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-05-18 16:45:09 (11151): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-05-18 16:45:09 (11151): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-05-18 16:45:09 (11151): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-05-18 16:45:09 (11151): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-05-18 16:45:09 (11151): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-05-18 16:45:09 (11151): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-05-18 16:45:09 (11151): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-05-18 16:45:09 (11151): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-05-18 16:45:09 (11151): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-05-18 16:45:09 (11151): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-05-18 16:45:09 (11151): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-05-18 16:45:09 (11151): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-05-18 16:45:09 (11151): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-05-18 16:45:09 (11151): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-05-18 16:45:09 (11151): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-05-18 16:45:09 (11151): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-05-18 16:45:09 (11151): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-05-18 16:45:09 (11151): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-05-18 16:45:09 (11151): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-05-18 16:45:09 (11151): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-05-18 16:45:09 (11151): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-05-18 16:45:09 (11151): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-05-18 16:45:09 (11151): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-05-18 16:45:09 (11151): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-05-18 16:45:09 (11151): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-05-18 16:45:09 (11151): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-05-18 16:45:09 (11151): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-05-18 16:45:14 (11151): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-05-18 16:45:14 (11151): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-05-18 16:45:19 (11151): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-05-18 16:45:19 (11151): Guest Log: 00:00:00.000076 main     Log opened 2024-05-18T14:45:17.369741000Z
2024-05-18 16:45:19 (11151): Guest Log: 00:00:00.000139 main     OS Product: Linux
2024-05-18 16:45:19 (11151): Guest Log: 00:00:00.000152 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-05-18 16:45:19 (11151): Guest Log: 00:00:00.000162 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-05-18 16:45:19 (11151): Guest Log: 00:00:00.000172 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-05-18 16:45:19 (11151): Guest Log: 00:00:00.000172 main     Process ID: 1274
2024-05-18 16:45:19 (11151): Guest Log: 00:00:00.000172 main     Package type: LINUX_64BITS_GENERIC
2024-05-18 16:45:19 (11151): Guest Log: 00:00:00.001677 main     5.2.32 r132073 started. Verbose level = 0
2024-05-18 16:45:19 (11151): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-05-18 16:45:19 (11151): Guest Log: [INFO] Mounting shared directory
2024-05-18 16:45:19 (11151): Guest Log: [INFO] Checking for init_data.xml
2024-05-18 16:45:22 (11151): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-05-18 16:45:22 (11151): Guest Log: [INFO] Detected branch: prod
2024-05-18 16:45:22 (11151): Guest Log: This is the prod version of the ATLAS job wrapper
2024-05-18 16:45:22 (11151): Guest Log: Copying input files
2024-05-18 16:45:23 (11151): Guest Log: Copied input files into RunAtlas.
2024-05-18 16:45:23 (11151): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-05-18 16:45:23 (11151): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-05-18 16:45:23 (11151): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-05-18 16:45:23 (11151): Guest Log: Further information can be found at the LHC@home message board.
2024-05-18 16:45:33 (11151): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-05-18 16:45:33 (11151): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-05-18 16:45:33 (11151): Guest Log: 2.6.3.0 1549 0 32236 132882 3 1 3116989 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2024-05-18 16:45:33 (11151): Guest Log: copied the webapp to /var/www
2024-05-18 16:45:33 (11151): Guest Log: ATHENA_PROC_NUMBER=3
2024-05-18 16:45:33 (11151): Guest Log: ATHENA_CORE_NUMBER=3
2024-05-18 16:45:34 (11151): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-05-18 16:45:34 (11151): Guest Log:  *** Starting ATLAS job. (PandaID=6208344878 taskID=38920982) ***
2024-05-18 18:15:33 (11151): VM state change detected. (old = 'running', new = 'paused')
2024-05-18 21:27:07 (11151): VM state change detected. (old = 'paused', new = 'running')
2024-05-18 21:27:13 (11151): Guest Log: 01:34:26.009519 timesync vgsvcTimeSyncWorker: Radical host time change: 11 503 142 000 000ns (HostNow=1 716 060 429 083 000 000 ns HostLast=1 716 048 925 941 000 000 ns)
2024-05-18 21:27:23 (11151): Guest Log: 01:34:36.019481 timesync vgsvcTimeSyncWorker: Radical guest time change: 11 255 738 851 000ns (GuestNow=1 716 060 439 105 487 000 ns GuestLast=1 716 049 183 366 636 000 ns fSetTimeLastLoop=true )
2024-05-18 21:35:41 (11151): Status Report: Elapsed Time: '6000.000000'
2024-05-18 21:35:41 (11151): Status Report: CPU Time: '15761.670000'
2024-05-18 22:40:50 (11151): Guest Log:  *** Job finished ***
2024-05-18 22:40:50 (11151): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-05-18 22:40:50 (11151): Guest Log: 2024-05-18 20:43:54,394 | INFO     | [data] queue_monitor thread has finished
2024-05-18 22:40:50 (11151): Guest Log: 2024-05-18 20:43:57,823 | INFO     | job.realtimelogging is not enabled
2024-05-18 22:40:50 (11151): Guest Log: 2024-05-18 20:43:58,828 | INFO     | [payload] run_realtimelog thread has finished
2024-05-18 22:40:50 (11151): Guest Log: 2024-05-18 20:44:00,136 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140218468091712)>', '<ExcThread(monitor, started 140217528874752)>']
2024-05-18 22:40:50 (11151): Guest Log: 2024-05-18 20:44:00,594 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-05-18 22:40:50 (11151): Guest Log: 2024-05-18 20:44:00,595 | INFO     | [monitor] control thread has ended
2024-05-18 22:40:50 (11151): Guest Log: 2024-05-18 20:44:05,145 | INFO     | all workflow threads have been joined
2024-05-18 22:40:50 (11151): Guest Log: 2024-05-18 20:44:05,145 | INFO     | end of generic workflow (traces error code: 0)
2024-05-18 22:40:50 (11151): Guest Log: 2024-05-18 20:44:05,145 | INFO     | traces error code: 0
2024-05-18 22:40:50 (11151): Guest Log: 2024-05-18 20:44:05,145 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-05-18 22:40:50 (11151): Guest Log: 2024-05-18 20:44:05,182 [wrapper] ==== pilot stdout END ====
2024-05-18 22:40:50 (11151): Guest Log: 2024-05-18 20:44:05,184 [wrapper] ==== wrapper stdout RESUME ====
2024-05-18 22:40:50 (11151): Guest Log: 2024-05-18 20:44:05,186 [wrapper] pilotpid: 6399
2024-05-18 22:40:50 (11151): Guest Log: 2024-05-18 20:44:05,188 [wrapper] Pilot exit status: 0
2024-05-18 22:40:50 (11151): Guest Log: 2024-05-18 20:44:05,238 [wrapper] pandaids: 6208344878
2024-05-18 22:40:50 (11151): Guest Log: 2024-05-18 20:44:05,259 [wrapper] cleanup: SIGTERM to supervisor_pilot 12281 6400
2024-05-18 22:40:50 (11151): Guest Log: 2024-05-18 20:44:05,261 [wrapper] Test setup, not cleaning
2024-05-18 22:40:50 (11151): Guest Log: 2024-05-18 20:44:05,263 [wrapper] ==== wrapper stdout END ====
2024-05-18 22:40:50 (11151): Guest Log: 2024-05-18 20:44:05,265 [wrapper] ==== wrapper stderr END ====
2024-05-18 22:40:50 (11151): Guest Log: 2024-05-18 20:44:05,269 [wrapper] apfmon messages muted
2024-05-18 22:40:50 (11151): Guest Log:  *** Error codes and diagnostics ***
2024-05-18 22:40:50 (11151): Guest Log:     "exeErrorCode": 0,
2024-05-18 22:40:50 (11151): Guest Log:     "exeErrorDiag": "",
2024-05-18 22:40:50 (11151): Guest Log:     "pilotErrorCode": 0,
2024-05-18 22:40:50 (11151): Guest Log:     "pilotErrorDiag": "",
2024-05-18 22:40:50 (11151): Guest Log:  *** Listing of results directory ***
2024-05-18 22:40:50 (11151): Guest Log: total 310236
2024-05-18 22:40:50 (11151): Guest Log: -rw-r--r--. 1 atlas atlas    467845 May 17 20:40 pilot3.tar.gz
2024-05-18 22:40:50 (11151): Guest Log: -rw-r--r--. 1 atlas atlas      5633 May 17 20:51 queuedata.json
2024-05-18 22:40:50 (11151): Guest Log: -rwx------. 1 atlas atlas     32251 May 17 20:52 runpilot2-wrapper.sh
2024-05-18 22:40:50 (11151): Guest Log: -rw-r--r--. 1 atlas atlas    480005 May 18 14:45 input.tar.gz
2024-05-18 22:40:50 (11151): Guest Log: -rw-r--r--. 1 atlas atlas     17537 May 18 14:45 start_atlas.sh
2024-05-18 22:40:50 (11151): Guest Log: -rw-r--r--. 1 atlas atlas      7115 May 18 14:45 init_data.xml
2024-05-18 22:40:50 (11151): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 18 14:45 EVNT.38776160._000133.pool.root.1 -> /data/./ATLAS.root_0
2024-05-18 22:40:50 (11151): Guest Log: -rw-r--r--. 1 atlas atlas      2626 May 18 14:45 pandaJob.out
2024-05-18 22:40:50 (11151): Guest Log: -rw-------. 1 atlas atlas       424 May 18 14:45 setup.sh.local
2024-05-18 22:40:50 (11151): Guest Log: -rw-------. 1 atlas atlas   1019426 May 18 14:45 agis_schedconf.cvmfs.json
2024-05-18 22:40:50 (11151): Guest Log: -rw-------. 1 atlas atlas   1324701 May 18 14:45 cric_ddmendpoints.json
2024-05-18 22:40:50 (11151): Guest Log: drwx------. 4 atlas atlas      4096 May 18 14:45 pilot3
2024-05-18 22:40:50 (11151): Guest Log: -rw-------. 1 atlas atlas 311823330 May 18 20:43 HITS.38920982._003428.pool.root.1
2024-05-18 22:40:50 (11151): Guest Log: -rw-------. 1 atlas atlas        98 May 18 20:43 pilot_heartbeat.json
2024-05-18 22:40:50 (11151): Guest Log: -rw-------. 1 atlas atlas      1024 May 18 20:43 memory_monitor_summary.json
2024-05-18 22:40:50 (11151): Guest Log: -rw-------. 1 atlas atlas         0 May 18 20:43 agis_ddmendpoints.agis.ALL.json
2024-05-18 22:40:50 (11151): Guest Log: -rw-------. 1 atlas atlas    270073 May 18 20:43 log.38920982._003428.job.log.tgz.1
2024-05-18 22:40:50 (11151): Guest Log: -rw-------. 1 atlas atlas      7694 May 18 20:43 heartbeat.json
2024-05-18 22:40:50 (11151): Guest Log: -rw-------. 1 atlas atlas      4466 May 18 20:44 pilotlog.txt
2024-05-18 22:40:50 (11151): Guest Log: -rw-------. 1 atlas atlas    930451 May 18 20:44 log.38920982._003428.job.log.1
2024-05-18 22:40:50 (11151): Guest Log: -rw-------. 1 atlas atlas       357 May 18 20:44 output.list
2024-05-18 22:40:50 (11151): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 18 20:44 runtime_log
2024-05-18 22:40:50 (11151): Guest Log: -rw-------. 1 atlas atlas   1218560 May 18 20:44 result.tar.gz
2024-05-18 22:40:50 (11151): Guest Log: -rw-------. 1 atlas atlas       652 May 18 20:44 xo7LDmvjJS5n9Rq4apoT9bVoABFKDmABFKDmlqFKDm1TLKDmMmv0Vn.diag
2024-05-18 22:40:50 (11151): Guest Log: -rw-r--r--. 1 atlas atlas     10949 May 18 20:44 runtime_log.err
2024-05-18 22:40:50 (11151): Guest Log: Looking for outputfile HITS.38920982._003428.pool.root.1
2024-05-18 22:40:50 (11151): Guest Log: HITS file was successfully produced
2024-05-18 22:40:50 (11151): Guest Log: -rw-------. 1 atlas atlas 311823330 May 18 20:43 /home/atlas/RunAtlas/HITS.38920982._003428.pool.root.1
2024-05-18 22:40:50 (11151): Guest Log: Successfully finished the ATLAS job!
2024-05-18 22:40:50 (11151): Guest Log: Copying the results back to the shared directory!
2024-05-18 22:40:50 (11151): Guest Log:  *** Contents of shared directory: ***
2024-05-18 22:40:50 (11151): Guest Log: total 619028
2024-05-18 22:40:50 (11151): Guest Log: -rw-r--r--. 1 root root 632150938 May 18 14:44 ATLAS.root_0
2024-05-18 22:40:50 (11151): Guest Log: -rw-r--r--. 1 root root      7115 May 18 14:44 init_data.xml
2024-05-18 22:40:50 (11151): Guest Log: -rw-r--r--. 1 root root    480005 May 18 14:44 input.tar.gz
2024-05-18 22:40:50 (11151): Guest Log: -rw-r--r--. 1 root root   1218560 May 18 20:40 result.tar.gz
2024-05-18 22:40:50 (11151): Guest Log: -rw-r--r--. 1 root root     17537 May 18 14:44 start_atlas.sh
2024-05-18 22:40:50 (11151): Guest Log:  *** Success! Shutting down the machine. ***
2024-05-18 22:40:50 (11151): VM Completion File Detected.
2024-05-18 22:40:50 (11151): Powering off VM.
2024-05-18 22:40:50 (11151): Successfully stopped VM.
2024-05-18 22:40:50 (11151): Deregistering VM. (boinc_91e41393c2737061, slot#8)
2024-05-18 22:40:50 (11151): Removing network bandwidth throttle group from VM.
2024-05-18 22:40:51 (11151): Removing VM from VirtualBox.
22:40:56 (11151): called boinc_finish(0)

</stderr_txt>
]]>

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