Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:12:58 (52371): wrapper (7.7.26015): starting
16:12:58 (52371): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 16:12:58] Arguments: --nthreads 12
[2024-05-18 16:12:58] Threads: 12
[2024-05-18 16:12:58] Checking for CVMFS
[2024-05-18 16:12:58] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 16:12:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 16:12:58] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 16:12:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 16:12:58] 2.11.3.0 6373 19020 441376 132881 1 113 28892057 46080001 16603 130560 2 167952036 99.818 69949057 23995 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2024-05-18 16:12:58] CVMFS is ok
[2024-05-18 16:12:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 16:12:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 16:12:58] Further information can be found at the LHC@home message board.
[2024-05-18 16:12:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 16:12:58] Checking for apptainer binary...
[2024-05-18 16:12:58] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 16:12:58] Running /usr/bin/apptainer --version
[2024-05-18 16:12:58] apptainer version 1.3.1-1.el7
[2024-05-18 16:12:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 16:12:59] mff2102.farm.particle.cz
[2024-05-18 16:12:59] apptainer works
[2024-05-18 16:12:59] Set ATHENA_PROC_NUMBER=12
[2024-05-18 16:12:59] Set ATHENA_CORE_NUMBER=12
[2024-05-18 16:12:59] Starting ATLAS job with PandaID=6208344746
[2024-05-18 16:12:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 18:43:16]  *** The last 200 lines of the pilot log: ***
[2024-05-18 18:43:16] 2024-05-18 16:39:08,457 | INFO     | -- intersect: -114506259645.39229
[2024-05-18 18:43:16] 2024-05-18 16:39:08,457 | INFO     | intersect: -114506259645.39229
[2024-05-18 18:43:16] 2024-05-18 16:39:08,457 | INFO     | chi2: 2.332008544789563
[2024-05-18 18:43:16] 2024-05-18 16:39:08,457 | INFO     | current chi2=2.332008544789563 (change=55.425678447489446 %)
[2024-05-18 18:43:16] 2024-05-18 16:39:08,457 | INFO     | model: linear, x: [1716042233.0, 1716042294.0, 1716042355.0, 1716042416.0, 1716042477.0, 1716042538.0, 1716042599.0, 1716042660.0, 1716042721.0, 1716042782.0, 1716
[2024-05-18 18:43:16] 2024-05-18 16:39:08,457 | INFO     | sum of square deviations: 729472282.0
[2024-05-18 18:43:16] 2024-05-18 16:39:08,458 | INFO     | sum of deviations: 20035665025.0
[2024-05-18 18:43:16] 2024-05-18 16:39:08,458 | INFO     | mean x: 1716046259.0
[2024-05-18 18:43:16] 2024-05-18 16:39:08,458 | INFO     | mean y: 2723139.751879699
[2024-05-18 18:43:16] 2024-05-18 16:39:08,458 | INFO     | -- intersect: -47130154779.14949
[2024-05-18 18:43:16] 2024-05-18 16:39:08,458 | INFO     | intersect: -47130154779.14949
[2024-05-18 18:43:16] 2024-05-18 16:39:08,459 | INFO     | chi2: 0.4444921860962428
[2024-05-18 18:43:16] 2024-05-18 16:39:08,459 | INFO     | current chi2=0.4444921860962428 (change=80.9395129752257 %)
[2024-05-18 18:43:16] 2024-05-18 16:39:08,459 | INFO     | model: linear, x: [1716042538.0, 1716042599.0, 1716042660.0, 1716042721.0, 1716042782.0, 1716042843.0, 1716042904.0, 1716042965.0, 1716043026.0, 1716043087.0, 1716
[2024-05-18 18:43:16] 2024-05-18 16:39:08,459 | INFO     | sum of square deviations: 650252192.0
[2024-05-18 18:43:16] 2024-05-18 16:39:08,460 | INFO     | sum of deviations: 6113146476.0
[2024-05-18 18:43:16] 2024-05-18 16:39:08,460 | INFO     | mean x: 1716046411.5
[2024-05-18 18:43:16] 2024-05-18 16:39:08,460 | INFO     | mean y: 2749821.875
[2024-05-18 18:43:16] 2024-05-18 16:39:08,460 | INFO     | -- intersect: -16130134007.163551
[2024-05-18 18:43:16] 2024-05-18 16:39:08,460 | INFO     | intersect: -16130134007.163551
[2024-05-18 18:43:16] 2024-05-18 16:39:08,460 | INFO     | chi2: 0.13342185071950285
[2024-05-18 18:43:16] 2024-05-18 16:39:08,460 | INFO     | current chi2=0.13342185071950285 (change=69.98330794264763 %)
[2024-05-18 18:43:16] 2024-05-18 16:39:08,460 | INFO     | model: linear, x: [1716042843.0, 1716042904.0, 1716042965.0, 1716043026.0, 1716043087.0, 1716043148.0, 1716043209.0, 1716043270.0, 1716043331.0, 1716043392.0, 1716
[2024-05-18 18:43:16] 2024-05-18 16:39:08,460 | INFO     | sum of square deviations: 576985702.0
[2024-05-18 18:43:16] 2024-05-18 16:39:08,461 | INFO     | sum of deviations: -1316322843.0000002
[2024-05-18 18:43:16] 2024-05-18 16:39:08,461 | INFO     | mean x: 1716046564.0
[2024-05-18 18:43:16] 2024-05-18 16:39:08,461 | INFO     | mean y: 2765105.3333333335
[2024-05-18 18:43:16] 2024-05-18 16:39:08,461 | INFO     | -- intersect: 3917717042.6429725
[2024-05-18 18:43:16] 2024-05-18 16:39:08,461 | INFO     | intersect: 3917717042.6429725
[2024-05-18 18:43:16] 2024-05-18 16:39:08,461 | INFO     | chi2: 0.002189450045081577
[2024-05-18 18:43:16] 2024-05-18 16:39:08,462 | INFO     | current chi2=0.002189450045081577 (change=98.35900189266259 %)
[2024-05-18 18:43:16] 2024-05-18 16:39:08,462 | INFO     | model: linear, x: [1716043148.0, 1716043209.0, 1716043270.0, 1716043331.0, 1716043392.0, 1716043453.0, 1716043514.0, 1716043575.0, 1716043636.0, 1716043697.0, 1716
[2024-05-18 18:43:16] 2024-05-18 16:39:08,462 | INFO     | sum of square deviations: 509440249.5
[2024-05-18 18:43:16] 2024-05-18 16:39:08,462 | INFO     | sum of deviations: -1734546437.5000002
[2024-05-18 18:43:16] 2024-05-18 16:39:08,463 | INFO     | mean x: 1716046716.5
[2024-05-18 18:43:16] 2024-05-18 16:39:08,463 | INFO     | mean y: 2766034.906779661
[2024-05-18 18:43:16] 2024-05-18 16:39:08,463 | INFO     | -- intersect: 5845576298.936866
[2024-05-18 18:43:16] 2024-05-18 16:39:08,463 | INFO     | intersect: 5845576298.936866
[2024-05-18 18:43:16] 2024-05-18 16:39:08,463 | INFO     | chi2: 0.0012940997894328248
[2024-05-18 18:43:16] 2024-05-18 16:39:08,463 | INFO     | current chi2=0.0012940997894328248 (change=40.893842618610286 %)
[2024-05-18 18:43:16] 2024-05-18 16:39:08,463 | INFO     | model: linear, x: [1716043453.0, 1716043514.0, 1716043575.0, 1716043636.0, 1716043697.0, 1716043758.0, 1716043819.0, 1716043880.0, 1716043941.0, 1716044002.0, 1716
[2024-05-18 18:43:16] 2024-05-18 16:39:08,464 | INFO     | sum of square deviations: 447383272.0
[2024-05-18 18:43:16] 2024-05-18 16:39:08,464 | INFO     | sum of deviations: -1680507239.000002
[2024-05-18 18:43:16] 2024-05-18 16:39:08,464 | INFO     | mean x: 1716046869.0
[2024-05-18 18:43:16] 2024-05-18 16:39:08,464 | INFO     | mean y: 2765898.9557522126
[2024-05-18 18:43:16] 2024-05-18 16:39:08,464 | INFO     | -- intersect: 6448758331.631661
[2024-05-18 18:43:16] 2024-05-18 16:39:08,464 | INFO     | intersect: 6448758331.631661
[2024-05-18 18:43:16] 2024-05-18 16:39:08,464 | INFO     | chi2: 0.0012289491643028368
[2024-05-18 18:43:16] 2024-05-18 16:39:08,465 | INFO     | current chi2=0.0012289491643028368 (change=5.0344359578747895 %)
[2024-05-18 18:43:16] 2024-05-18 16:39:08,465 | INFO     | left removable region: 60
[2024-05-18 18:43:16] 2024-05-18 16:39:08,465 | INFO     | model: linear, x: [1716045283.0, 1716045344.0, 1716045405.0, 1716045466.0, 1716045527.0, 1716045588.0, 1716045649.0, 1716045710.0, 1716045771.0, 1716045832.0, 1716
[2024-05-18 18:43:16] 2024-05-18 16:39:08,465 | INFO     | sum of square deviations: 141539398.0
[2024-05-18 18:43:16] 2024-05-18 16:39:08,465 | INFO     | sum of deviations: 90040636.00000001
[2024-05-18 18:43:16] 2024-05-18 16:39:08,465 | INFO     | mean x: 1716047601.0
[2024-05-18 18:43:16] 2024-05-18 16:39:08,465 | INFO     | mean y: 2758892.701298701
[2024-05-18 18:43:16] 2024-05-18 16:39:08,466 | INFO     | -- intersect: -1088909007.42863
[2024-05-18 18:43:16] 2024-05-18 16:39:08,466 | INFO     | intersect: -1088909007.42863
[2024-05-18 18:43:16] 2024-05-18 16:39:08,466 | INFO     | chi2: 8.418550636938086e-06
[2024-05-18 18:43:16] 2024-05-18 16:39:08,466 | INFO     | -- intersect: -1088909007.42863
[2024-05-18 18:43:16] 2024-05-18 16:39:08,466 | INFO     | current memory leak: 0.64 B/s (using 77 data points, chi2=0.00)
[2024-05-18 18:43:16] 2024-05-18 16:39:08,466 | INFO     | ..............................
[2024-05-18 18:43:16] 2024-05-18 16:39:08,466 | INFO     | . Timing measurements:
[2024-05-18 18:43:16] 2024-05-18 16:39:08,466 | INFO     | . get job = 0 s
[2024-05-18 18:43:16] 2024-05-18 16:39:08,467 | INFO     | . initial setup = 1 s
[2024-05-18 18:43:16] 2024-05-18 16:39:08,467 | INFO     | . payload setup = 6 s
[2024-05-18 18:43:16] 2024-05-18 16:39:08,467 | INFO     | . stage-in = 0 s
[2024-05-18 18:43:16] 2024-05-18 16:39:08,467 | INFO     | . payload execution = 8711 s
[2024-05-18 18:43:16] 2024-05-18 16:39:08,467 | INFO     | . stage-out = 1 s
[2024-05-18 18:43:16] 2024-05-18 16:39:08,467 | INFO     | . log creation = 0 s
[2024-05-18 18:43:16] 2024-05-18 16:39:08,467 | INFO     | ..............................
[2024-05-18 18:43:16] 2024-05-18 16:39:08,558 | INFO     | 
[2024-05-18 18:43:16] 2024-05-18 16:39:08,558 | INFO     | job summary report
[2024-05-18 18:43:16] 2024-05-18 16:39:08,558 | INFO     | --------------------------------------------------
[2024-05-18 18:43:16] 2024-05-18 16:39:08,558 | INFO     | PanDA job id: 6208344746
[2024-05-18 18:43:16] 2024-05-18 16:39:08,558 | INFO     | task id: 38920982
[2024-05-18 18:43:16] 2024-05-18 16:39:08,558 | INFO     | errors: (none)
[2024-05-18 18:43:16] 2024-05-18 16:39:08,559 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 18:43:16] 2024-05-18 16:39:08,559 | INFO     | pilot state: finished 
[2024-05-18 18:43:16] 2024-05-18 16:39:08,559 | INFO     | transexitcode: 0
[2024-05-18 18:43:16] 2024-05-18 16:39:08,559 | INFO     | exeerrorcode: 0
[2024-05-18 18:43:16] 2024-05-18 16:39:08,559 | INFO     | exeerrordiag: 
[2024-05-18 18:43:16] 2024-05-18 16:39:08,559 | INFO     | exitcode: 0
[2024-05-18 18:43:16] 2024-05-18 16:39:08,559 | INFO     | exitmsg: OK
[2024-05-18 18:43:16] 2024-05-18 16:39:08,559 | INFO     | cpuconsumptiontime: 81496 s
[2024-05-18 18:43:16] 2024-05-18 16:39:08,559 | INFO     | nevents: 400
[2024-05-18 18:43:16] 2024-05-18 16:39:08,559 | INFO     | neventsw: 0
[2024-05-18 18:43:16] 2024-05-18 16:39:08,559 | INFO     | pid: 89813
[2024-05-18 18:43:16] 2024-05-18 16:39:08,559 | INFO     | pgrp: 89813
[2024-05-18 18:43:16] 2024-05-18 16:39:08,559 | INFO     | corecount: 12
[2024-05-18 18:43:16] 2024-05-18 16:39:08,559 | INFO     | event service: False
[2024-05-18 18:43:16] 2024-05-18 16:39:08,559 | INFO     | sizes: {0: 2392015, 1: 2392214, 6: 2392420, 11: 2392448, 8723: 2420519, 8725: 2429481, 8728: 2429665, 8739: 2429835}
[2024-05-18 18:43:16] 2024-05-18 16:39:08,560 | INFO     | --------------------------------------------------
[2024-05-18 18:43:16] 2024-05-18 16:39:08,560 | INFO     | 
[2024-05-18 18:43:16] 2024-05-18 16:39:08,560 | INFO     | executing command: ls -lF /scratch/.boinc/slots/6
[2024-05-18 18:43:16] 2024-05-18 16:39:08,601 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 18:43:16] 2024-05-18 16:39:08,601 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 18:43:16] 2024-05-18 16:39:08,601 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 18:43:16] 2024-05-18 16:39:08,601 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 18:43:16] 2024-05-18 16:39:08,601 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 18:43:16] 2024-05-18 16:39:08,601 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 18:43:16] 2024-05-18 16:39:08,601 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 18:43:16] 2024-05-18 16:39:08,601 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 18:43:16] 2024-05-18 16:39:08,601 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 18:43:16] 2024-05-18 16:39:08,602 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 18:43:16] 2024-05-18 16:39:08,602 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 18:43:16] 2024-05-18 16:39:08,602 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 18:43:16] 2024-05-18 16:39:08,602 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 18:43:16] 2024-05-18 16:39:08,602 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 18:43:16] 2024-05-18 16:39:08,602 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 18:43:16] 2024-05-18 16:39:08,602 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 18:43:16] 2024-05-18 16:39:08,602 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 18:43:16] 2024-05-18 16:39:08,602 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 18:43:16] 2024-05-18 16:39:08,603 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 18:43:16] 2024-05-18 16:39:08,603 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 18:43:16] 2024-05-18 16:39:08,603 | INFO     | job 6208344746 has completed (purged errors)
[2024-05-18 18:43:16] 2024-05-18 16:39:08,603 | INFO     | overall cleanup function is called
[2024-05-18 18:43:16] 2024-05-18 16:39:09,612 | INFO     | --- collectZombieJob: --- 10, [89813]
[2024-05-18 18:43:16] 2024-05-18 16:39:09,612 | INFO     | zombie collector waiting for pid 89813
[2024-05-18 18:43:16] 2024-05-18 16:39:09,612 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 18:43:16] 2024-05-18 16:39:10,618 | INFO     | collected zombie processes
[2024-05-18 18:43:16] 2024-05-18 16:39:10,618 | INFO     | will now attempt to kill all subprocesses of pid=89813
[2024-05-18 18:43:16] 2024-05-18 16:39:11,053 | INFO     | process IDs to be killed: [89813] (in reverse order)
[2024-05-18 18:43:16] 2024-05-18 16:39:11,262 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 18:43:16] 2024-05-18 16:39:11,262 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 18:43:16] 2024-05-18 16:39:11,279 | INFO     | did not find any defunct processes belonging to 89813
[2024-05-18 18:43:16] 2024-05-18 16:39:11,295 | INFO     | did not find any defunct processes belonging to 89813
[2024-05-18 18:43:16] 2024-05-18 16:39:11,296 | INFO     | ready for new job
[2024-05-18 18:43:16] 2024-05-18 16:39:11,296 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 18:43:16] 2024-05-18 16:39:11,297 | INFO     | *************************************
[2024-05-18 18:43:16] 2024-05-18 16:39:11,297 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 18:43:16] 2024-05-18 16:39:11,297 | INFO     | *************************************
[2024-05-18 18:43:16] 2024-05-18 16:39:11,298 | INFO     | 
[2024-05-18 18:43:16] 2024-05-18 16:39:11,302 | INFO     | architecture information:
[2024-05-18 18:43:16] 2024-05-18 16:39:11,303 | INFO     | executing command: cat /etc/os-release
[2024-05-18 18:43:16] 2024-05-18 16:39:11,492 | INFO     | cat /etc/os-release:
[2024-05-18 18:43:16] NAME="CentOS Linux"
[2024-05-18 18:43:16] VERSION="7 (Core)"
[2024-05-18 18:43:16] ID="centos"
[2024-05-18 18:43:16] ID_LIKE="rhel fedora"
[2024-05-18 18:43:16] VERSION_ID="7"
[2024-05-18 18:43:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 18:43:16] ANSI_COLOR="0;31"
[2024-05-18 18:43:16] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 18:43:16] HOME_URL="https://www.centos.org/"
[2024-05-18 18:43:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 18:43:16] 
[2024-05-18 18:43:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 18:43:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 18:43:16] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 18:43:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 18:43:16] 
[2024-05-18 18:43:16] 2024-05-18 16:39:11,493 | INFO     | *************************************
[2024-05-18 18:43:16] 2024-05-18 16:39:11,996 | INFO     | executing command: df -mP /scratch/.boinc/slots/6
[2024-05-18 18:43:16] 2024-05-18 16:39:12,089 | INFO     | sufficient remaining disk space (1629447258112 B)
[2024-05-18 18:43:16] 2024-05-18 16:39:12,089 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 18:43:16] 2024-05-18 16:39:12,089 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 18:43:16] 2024-05-18 16:39:12,147 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 18:43:16] 2024-05-18 16:39:12,285 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 18:43:16] 2024-05-18 16:39:12,432 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 18:43:16] 2024-05-18 16:39:12,432 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 18:43:16] 2024-05-18 16:39:12,432 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 18:43:16] 2024-05-18 16:39:12,853 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 18:43:16] 2024-05-18 16:39:12,853 | INFO     | aborting loop
[2024-05-18 18:43:16] 2024-05-18 16:39:12,914 | INFO     | all data control threads have been joined
[2024-05-18 18:43:16] 2024-05-18 16:39:13,094 | INFO     | [job] retrieve thread has finished
[2024-05-18 18:43:16] 2024-05-18 16:39:13,131 | INFO     | all job control threads have been joined
[2024-05-18 18:43:16] 2024-05-18 16:39:13,151 | INFO     | all payload control threads have been joined
[2024-05-18 18:43:16] 2024-05-18 16:39:13,154 | INFO     | [job] validate thread has finished
[2024-05-18 18:43:16] 2024-05-18 16:39:13,343 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 18:43:16] 2024-05-18 16:39:13,402 | INFO     | [data] copytool_in thread has finished
[2024-05-18 18:43:16] 2024-05-18 16:39:13,463 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 18:43:16] 2024-05-18 16:39:13,573 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 18:43:16] 2024-05-18 16:39:13,859 | INFO     | [job] job monitor thread has finished
[2024-05-18 18:43:16] 2024-05-18 16:39:13,919 | INFO     | [data] control thread has finished
[2024-05-18 18:43:16] 2024-05-18 16:39:13,988 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 18:43:16] 2024-05-18 16:39:14,137 | INFO     | [job] control thread has finished
[2024-05-18 18:43:16] 2024-05-18 16:39:14,154 | INFO     | [data] copytool_out thread has finished
[2024-05-18 18:43:16] 2024-05-18 16:39:14,157 | INFO     | [payload] control thread has finished
[2024-05-18 18:43:16] 2024-05-18 16:39:14,184 | INFO     | [payload] validate_post thread has finished
[2024-05-18 18:43:16] 2024-05-18 16:39:14,414 | INFO     | [payload] failed_post thread has finished
[2024-05-18 18:43:16] 2024-05-18 16:39:14,542 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 18:43:16] 2024-05-18 16:39:14,579 | INFO     | [job] queue monitor thread has finished
[2024-05-18 18:43:16] 2024-05-18 16:39:16,297 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 18:43:16] 2024-05-18 16:39:18,227 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139820212913984)>', '<ExcThread(monitor, started 139819556525824)>']
[2024-05-18 18:43:16] 2024-05-18 16:39:18,465 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 18:43:16] 2024-05-18 16:39:18,465 | INFO     | [monitor] control thread has ended
[2024-05-18 18:43:16] 2024-05-18 16:39:23,253 | INFO     | all workflow threads have been joined
[2024-05-18 18:43:16] 2024-05-18 16:39:23,253 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 18:43:16] 2024-05-18 16:39:23,253 | INFO     | traces error code: 0
[2024-05-18 18:43:16] 2024-05-18 16:39:23,254 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 18:43:16] 2024-05-18 16:39:23,360 [wrapper] ==== pilot stdout END ====
[2024-05-18 18:43:16] 2024-05-18 16:39:23,367 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 18:43:16] 2024-05-18 16:39:23,379 [wrapper] pilotpid: 65734
[2024-05-18 18:43:16] 2024-05-18 16:39:23,393 [wrapper] Pilot exit status: 0
[2024-05-18 18:43:16] 2024-05-18 16:39:23,528 [wrapper] pandaids: 6208344746
[2024-05-18 18:43:16] 2024-05-18 16:39:23,687 [wrapper] cleanup: SIGTERM to supervisor_pilot 86008 65736
[2024-05-18 18:43:16] 2024-05-18 16:39:23,745 [wrapper] Test setup, not cleaning
[2024-05-18 18:43:16] 2024-05-18 16:39:23,787 [wrapper] ==== wrapper stdout END ====
[2024-05-18 18:43:16] 2024-05-18 16:39:23,793 [wrapper] ==== wrapper stderr END ====
[2024-05-18 18:43:16] 2024-05-18 16:39:23,825 [wrapper] apfmon messages muted
[2024-05-18 18:43:16]  *** Error codes and diagnostics ***
[2024-05-18 18:43:16]     "exeErrorCode": 0,
[2024-05-18 18:43:16]     "exeErrorDiag": "",
[2024-05-18 18:43:16]     "pilotErrorCode": 0,
[2024-05-18 18:43:16]     "pilotErrorDiag": "",
[2024-05-18 18:43:16]  *** Listing of results directory ***
[2024-05-18 18:43:16] total 925572
[2024-05-18 18:43:16] -rw-r--r--. 1 boinc boinc    467845 May 17 22:40 pilot3.tar.gz
[2024-05-18 18:43:16] -rwx------. 1 boinc boinc     32251 May 17 22:41 runpilot2-wrapper.sh
[2024-05-18 18:43:16] -rw-r--r--. 1 boinc boinc      5633 May 17 22:41 queuedata.json
[2024-05-18 18:43:16] -rw-r--r--. 1 boinc boinc       100 May 18 16:12 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 18:43:16] -rwxr-xr-x. 1 boinc boinc      7986 May 18 16:12 run_atlas
[2024-05-18 18:43:16] -rw-r--r--. 1 boinc boinc       105 May 18 16:12 job.xml
[2024-05-18 18:43:16] -rw-r--r--. 1 boinc boinc      6621 May 18 16:12 init_data.xml
[2024-05-18 18:43:16] -rw-r--r--. 2 boinc boinc 631956085 May 18 16:12 EVNT.38776160._000072.pool.root.1
[2024-05-18 18:43:16] -rw-r--r--. 2 boinc boinc     17537 May 18 16:12 start_atlas.sh
[2024-05-18 18:43:16] drwxrwx--x. 2 boinc boinc      4096 May 18 16:12 shared
[2024-05-18 18:43:16] -rw-r--r--. 2 boinc boinc    480008 May 18 16:12 input.tar.gz
[2024-05-18 18:43:16] -rw-r--r--. 1 boinc boinc         0 May 18 16:12 boinc_lockfile
[2024-05-18 18:43:16] -rw-r--r--. 1 boinc boinc      2625 May 18 16:12 pandaJob.out
[2024-05-18 18:43:16] -rw-------. 1 boinc boinc       424 May 18 16:13 setup.sh.local
[2024-05-18 18:43:16] -rw-------. 1 boinc boinc   1019434 May 18 16:13 agis_schedconf.cvmfs.json
[2024-05-18 18:43:16] -rw-------. 1 boinc boinc         0 May 18 16:13 agis_ddmendpoints.agis.ALL.json
[2024-05-18 18:43:16] -rw-------. 1 boinc boinc   1324701 May 18 16:13 cric_ddmendpoints.json
[2024-05-18 18:43:16] drwx------. 4 boinc boinc      4096 May 18 16:13 pilot3
[2024-05-18 18:43:16] -rw-------. 1 boinc boinc 309838063 May 18 18:38 HITS.38920982._003366.pool.root.1
[2024-05-18 18:43:16] -rw-r--r--. 1 boinc boinc       530 May 18 18:38 boinc_task_state.xml
[2024-05-18 18:43:16] -rw-------. 1 boinc boinc      1037 May 18 18:38 memory_monitor_summary.json
[2024-05-18 18:43:16] -rw-------. 1 boinc boinc        95 May 18 18:38 pilot_heartbeat.json
[2024-05-18 18:43:16] -rw-------. 1 boinc boinc    415294 May 18 18:38 log.38920982._003366.job.log.tgz.1
[2024-05-18 18:43:16] -rw-------. 1 boinc boinc      7707 May 18 18:39 heartbeat.json
[2024-05-18 18:43:16] -rw-------. 1 boinc boinc      4214 May 18 18:39 pilotlog.txt
[2024-05-18 18:43:16] -rw-------. 1 boinc boinc    809786 May 18 18:39 log.38920982._003366.job.log.1
[2024-05-18 18:43:16] -rw-------. 1 boinc boinc       357 May 18 18:39 output.list
[2024-05-18 18:43:16] -rw-r--r--. 1 boinc boinc       620 May 18 18:39 runtime_log
[2024-05-18 18:43:16] -rw-------. 1 boinc boinc   1249280 May 18 18:39 result.tar.gz
[2024-05-18 18:43:16] -rw-------. 1 boinc boinc       659 May 18 18:39 ZuPLDmtZJS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmUXRKDmBE8jjm.diag
[2024-05-18 18:43:16] -rw-r--r--. 1 boinc boinc     11064 May 18 18:39 runtime_log.err
[2024-05-18 18:43:16] -rw-r--r--. 1 boinc boinc        26 May 18 18:43 wrapper_checkpoint.txt
[2024-05-18 18:43:16] -rw-r--r--. 1 boinc boinc      8192 May 18 18:43 boinc_mmap_file
[2024-05-18 18:43:16] -rw-r--r--. 1 boinc boinc     21554 May 18 18:43 stderr.txt
[2024-05-18 18:43:16] HITS file was successfully produced:
[2024-05-18 18:43:16] -rw-------. 1 boinc boinc 309838063 May 18 18:38 shared/HITS.pool.root.1
[2024-05-18 18:43:16]  *** Contents of shared directory: ***
[2024-05-18 18:43:16] total 921448
[2024-05-18 18:43:16] -rw-r--r--. 2 boinc boinc 631956085 May 18 16:12 ATLAS.root_0
[2024-05-18 18:43:16] -rw-r--r--. 2 boinc boinc     17537 May 18 16:12 start_atlas.sh
[2024-05-18 18:43:16] -rw-r--r--. 2 boinc boinc    480008 May 18 16:12 input.tar.gz
[2024-05-18 18:43:16] -rw-------. 1 boinc boinc 309838063 May 18 18:38 HITS.pool.root.1
[2024-05-18 18:43:16] -rw-------. 1 boinc boinc   1249280 May 18 18:39 result.tar.gz
18:43:18 (52371): run_atlas exited; CPU time 81259.872297
18:43:18 (52371): called boinc_finish(0)

</stderr_txt>
]]>

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