Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
00:51:19 (205247): wrapper (7.7.26015): starting
00:51:19 (205247): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 00:51:19] Arguments: --nthreads 12
[2024-05-18 00:51:19] Threads: 12
[2024-05-18 00:51:19] Checking for CVMFS
[2024-05-18 00:51:20] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 00:51:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 00:51:20] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 00:51:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 00:51:20] 2.10.1.0 70285 184642 161372 132871 1 121 24855541 45568001 4876 130560 0 618682006 99.754 410255297 3821 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-05-18 00:51:20] CVMFS is ok
[2024-05-18 00:51:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 00:51:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 00:51:20] Further information can be found at the LHC@home message board.
[2024-05-18 00:51:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 00:51:20] Checking for apptainer binary...
[2024-05-18 00:51:20] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 00:51:20] Running /usr/bin/apptainer --version
[2024-05-18 00:51:20] apptainer version 1.1.8-1.el7
[2024-05-18 00:51:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 00:51:21] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0055.triumf.lcg
[2024-05-18 00:51:21] apptainer works
[2024-05-18 00:51:21] Set ATHENA_PROC_NUMBER=12
[2024-05-18 00:51:21] Set ATHENA_CORE_NUMBER=12
[2024-05-18 00:51:21] Starting ATLAS job with PandaID=6208324193
[2024-05-18 00:51:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 05:43:36]  *** The last 200 lines of the pilot log: ***
[2024-05-18 05:43:36] 2024-05-18 12:43:12,052 | INFO     | job 6208324193 has finished - writing final server update
[2024-05-18 05:43:36] 2024-05-18 12:43:12,053 | INFO     | total number of processed events: 1850 (read)
[2024-05-18 05:43:36] 2024-05-18 12:43:12,059 | INFO     | executing command: lscpu
[2024-05-18 05:43:36] 2024-05-18 12:43:12,126 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-18 05:43:36] 2024-05-18 12:43:12,127 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 05:43:36] 2024-05-18 12:43:12,188 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 05:43:36] 2024-05-18 12:43:12,765 | INFO     | monitor loop #1356: job 0:6208324193 is in state 'finished'
[2024-05-18 05:43:36] 2024-05-18 12:43:12,766 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 05:43:36] 2024-05-18 12:43:15,269 | INFO     | monitor loop #1357: job 0:6208324193 is in state 'finished'
[2024-05-18 05:43:36] 2024-05-18 12:43:15,269 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 05:43:36] 2024-05-18 12:43:17,772 | INFO     | monitor loop #1358: job 0:6208324193 is in state 'finished'
[2024-05-18 05:43:36] 2024-05-18 12:43:17,772 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 05:43:36] 2024-05-18 12:43:20,276 | INFO     | monitor loop #1359: job 0:6208324193 is in state 'finished'
[2024-05-18 05:43:36] 2024-05-18 12:43:20,276 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 05:43:36] 2024-05-18 12:43:22,779 | INFO     | monitor loop #1360: job 0:6208324193 is in state 'finished'
[2024-05-18 05:43:36] 2024-05-18 12:43:22,780 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 05:43:36] 2024-05-18 12:43:23,384 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-18 05:43:36] 2024-05-18 12:43:23,384 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6208324193/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 05:43:36] 2024-05-18 12:43:23,386 | INFO     | extracted standard info from prmon json
[2024-05-18 05:43:36] 2024-05-18 12:43:23,386 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 05:43:36] 2024-05-18 12:43:23,386 | WARNING  | GPU info not found in prmon json
[2024-05-18 05:43:36] 2024-05-18 12:43:23,393 | INFO     | fitting pss+swap vs Time
[2024-05-18 05:43:36] 2024-05-18 12:43:23,393 | INFO     | model: linear, x: [1716018722.0, 1716018783.0, 1716018844.0, 1716018905.0, 1716018966.0, 1716019027.0, 1716019088.0, 1716019149.0, 1716019210.0, 1716019271.0, 1716
[2024-05-18 05:43:36] 2024-05-18 12:43:23,393 | INFO     | sum of square deviations: 7330250928.0
[2024-05-18 05:43:36] 2024-05-18 12:43:23,396 | INFO     | sum of deviations: 673338992540.0
[2024-05-18 05:43:36] 2024-05-18 12:43:23,397 | INFO     | mean x: 1716027445.0
[2024-05-18 05:43:36] 2024-05-18 12:43:23,397 | INFO     | mean y: 3638588.8606271776
[2024-05-18 05:43:36] 2024-05-18 12:43:23,397 | INFO     | -- intersect: -157626461981.59152
[2024-05-18 05:43:36] 2024-05-18 12:43:23,397 | INFO     | intersect: -157626461981.59152
[2024-05-18 05:43:36] 2024-05-18 12:43:23,397 | INFO     | chi2: 24.925160960160813
[2024-05-18 05:43:36] 2024-05-18 12:43:23,398 | INFO     | model: linear, x: [1716018722.0, 1716018783.0, 1716018844.0, 1716018905.0, 1716018966.0, 1716019027.0, 1716019088.0, 1716019149.0, 1716019210.0, 1716019271.0, 1716
[2024-05-18 05:43:36] 2024-05-18 12:43:23,398 | INFO     | sum of square deviations: 6953769450.5
[2024-05-18 05:43:36] 2024-05-18 12:43:23,401 | INFO     | sum of deviations: 803686070737.5001
[2024-05-18 05:43:36] 2024-05-18 12:43:23,401 | INFO     | mean x: 1716027292.5
[2024-05-18 05:43:36] 2024-05-18 12:43:23,401 | INFO     | mean y: 3691369.755319149
[2024-05-18 05:43:36] 2024-05-18 12:43:23,401 | INFO     | -- intersect: -198327191154.4662
[2024-05-18 05:43:36] 2024-05-18 12:43:23,401 | INFO     | intersect: -198327191154.4662
[2024-05-18 05:43:36] 2024-05-18 12:43:23,402 | INFO     | chi2: 20.943414540810217
[2024-05-18 05:43:36] 2024-05-18 12:43:23,402 | INFO     | current chi2=20.943414540810217 (change=15.974807246841172 %)
[2024-05-18 05:43:36] 2024-05-18 12:43:23,402 | INFO     | right removable region: 281
[2024-05-18 05:43:36] 2024-05-18 12:43:23,402 | INFO     | model: linear, x: [1716019027.0, 1716019088.0, 1716019149.0, 1716019210.0, 1716019271.0, 1716019332.0, 1716019393.0, 1716019454.0, 1716019515.0, 1716019576.0, 1716
[2024-05-18 05:43:36] 2024-05-18 12:43:23,403 | INFO     | sum of square deviations: 6953769450.5
[2024-05-18 05:43:36] 2024-05-18 12:43:23,405 | INFO     | sum of deviations: 541516094555.50024
[2024-05-18 05:43:36] 2024-05-18 12:43:23,405 | INFO     | mean x: 1716027597.5
[2024-05-18 05:43:36] 2024-05-18 12:43:23,405 | INFO     | mean y: 3691949.5354609927
[2024-05-18 05:43:36] 2024-05-18 12:43:23,406 | INFO     | -- intersect: -133629809903.31087
[2024-05-18 05:43:36] 2024-05-18 12:43:23,406 | INFO     | intersect: -133629809903.31087
[2024-05-18 05:43:36] 2024-05-18 12:43:23,406 | INFO     | chi2: 21.09092361017766
[2024-05-18 05:43:36] 2024-05-18 12:43:23,406 | INFO     | current chi2=21.09092361017766 (change=15.382999355998598 %)
[2024-05-18 05:43:36] 2024-05-18 12:43:23,406 | INFO     | left removable region: 10
[2024-05-18 05:43:36] 2024-05-18 12:43:23,407 | INFO     | model: linear, x: [1716019332.0, 1716019393.0, 1716019454.0, 1716019515.0, 1716019576.0, 1716019637.0, 1716019698.0, 1716019759.0, 1716019820.0, 1716019881.0, 1716
[2024-05-18 05:43:36] 2024-05-18 12:43:23,407 | INFO     | sum of square deviations: 6171352920.0
[2024-05-18 05:43:36] 2024-05-18 12:43:23,409 | INFO     | sum of deviations: 579303545474.0005
[2024-05-18 05:43:36] 2024-05-18 12:43:23,410 | INFO     | mean x: 1716027567.0
[2024-05-18 05:43:36] 2024-05-18 12:43:23,410 | INFO     | mean y: 3809962.4132841327
[2024-05-18 05:43:36] 2024-05-18 12:43:23,410 | INFO     | -- intersect: -161079321496.90747
[2024-05-18 05:43:36] 2024-05-18 12:43:23,410 | INFO     | intersect: -161079321496.90747
[2024-05-18 05:43:36] 2024-05-18 12:43:23,410 | INFO     | chi2: 13.456990324288762
[2024-05-18 05:43:36] 2024-05-18 12:43:23,410 | INFO     | -- intersect: -161079321496.90747
[2024-05-18 05:43:36] 2024-05-18 12:43:23,411 | INFO     | current memory leak: 93.87 B/s (using 271 data points, chi2=13.46)
[2024-05-18 05:43:36] 2024-05-18 12:43:23,411 | INFO     | ..............................
[2024-05-18 05:43:36] 2024-05-18 12:43:23,411 | INFO     | . Timing measurements:
[2024-05-18 05:43:36] 2024-05-18 12:43:23,411 | INFO     | . get job = 0 s
[2024-05-18 05:43:36] 2024-05-18 12:43:23,411 | INFO     | . initial setup = 2 s
[2024-05-18 05:43:36] 2024-05-18 12:43:23,412 | INFO     | . payload setup = 9 s
[2024-05-18 05:43:36] 2024-05-18 12:43:23,412 | INFO     | . stage-in = 0 s
[2024-05-18 05:43:36] 2024-05-18 12:43:23,412 | INFO     | . payload execution = 17463 s
[2024-05-18 05:43:36] 2024-05-18 12:43:23,412 | INFO     | . stage-out = 3 s
[2024-05-18 05:43:36] 2024-05-18 12:43:23,412 | INFO     | . log creation = 0 s
[2024-05-18 05:43:36] 2024-05-18 12:43:23,412 | INFO     | ..............................
[2024-05-18 05:43:36] 2024-05-18 12:43:23,494 | INFO     | 
[2024-05-18 05:43:36] 2024-05-18 12:43:23,495 | INFO     | job summary report
[2024-05-18 05:43:36] 2024-05-18 12:43:23,495 | INFO     | --------------------------------------------------
[2024-05-18 05:43:36] 2024-05-18 12:43:23,495 | INFO     | PanDA job id: 6208324193
[2024-05-18 05:43:36] 2024-05-18 12:43:23,495 | INFO     | task id: 38734053
[2024-05-18 05:43:36] 2024-05-18 12:43:23,495 | INFO     | errors: (none)
[2024-05-18 05:43:36] 2024-05-18 12:43:23,495 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 05:43:36] 2024-05-18 12:43:23,495 | INFO     | pilot state: finished 
[2024-05-18 05:43:36] 2024-05-18 12:43:23,495 | INFO     | transexitcode: 0
[2024-05-18 05:43:36] 2024-05-18 12:43:23,495 | INFO     | exeerrorcode: 0
[2024-05-18 05:43:36] 2024-05-18 12:43:23,495 | INFO     | exeerrordiag: 
[2024-05-18 05:43:36] 2024-05-18 12:43:23,495 | INFO     | exitcode: 0
[2024-05-18 05:43:36] 2024-05-18 12:43:23,495 | INFO     | exitmsg: OK
[2024-05-18 05:43:36] 2024-05-18 12:43:23,495 | INFO     | cpuconsumptiontime: 179613 s
[2024-05-18 05:43:36] 2024-05-18 12:43:23,495 | INFO     | nevents: 1850
[2024-05-18 05:43:36] 2024-05-18 12:43:23,495 | INFO     | neventsw: 0
[2024-05-18 05:43:36] 2024-05-18 12:43:23,496 | INFO     | pid: 216498
[2024-05-18 05:43:36] 2024-05-18 12:43:23,496 | INFO     | pgrp: 216498
[2024-05-18 05:43:36] 2024-05-18 12:43:23,496 | INFO     | corecount: 12
[2024-05-18 05:43:36] 2024-05-18 12:43:23,496 | INFO     | event service: False
[2024-05-18 05:43:36] 2024-05-18 12:43:23,496 | INFO     | sizes: {0: 2394945, 5: 2395183, 11: 2395239, 17477: 2447740, 17481: 2455582, 17482: 2455638, 17495: 2455988}
[2024-05-18 05:43:36] 2024-05-18 12:43:23,496 | INFO     | --------------------------------------------------
[2024-05-18 05:43:36] 2024-05-18 12:43:23,496 | INFO     | 
[2024-05-18 05:43:36] 2024-05-18 12:43:23,496 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 05:43:36] 2024-05-18 12:43:23,526 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 05:43:36] 2024-05-18 12:43:23,526 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 05:43:36] 2024-05-18 12:43:23,526 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 05:43:36] 2024-05-18 12:43:23,526 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 05:43:36] 2024-05-18 12:43:23,527 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 05:43:36] 2024-05-18 12:43:23,527 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 05:43:36] 2024-05-18 12:43:23,527 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 05:43:36] 2024-05-18 12:43:23,527 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 05:43:36] 2024-05-18 12:43:23,527 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 05:43:36] 2024-05-18 12:43:23,527 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 05:43:36] 2024-05-18 12:43:23,527 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 05:43:36] 2024-05-18 12:43:23,527 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 05:43:36] 2024-05-18 12:43:23,527 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 05:43:36] 2024-05-18 12:43:23,527 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 05:43:36] 2024-05-18 12:43:23,527 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 05:43:36] 2024-05-18 12:43:23,527 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 05:43:36] 2024-05-18 12:43:23,527 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 05:43:36] 2024-05-18 12:43:23,527 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 05:43:36] 2024-05-18 12:43:23,527 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 05:43:36] 2024-05-18 12:43:23,527 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 05:43:36] 2024-05-18 12:43:23,527 | INFO     | job 6208324193 has completed (purged errors)
[2024-05-18 05:43:36] 2024-05-18 12:43:23,528 | INFO     | overall cleanup function is called
[2024-05-18 05:43:36] 2024-05-18 12:43:24,543 | INFO     | --- collectZombieJob: --- 10, [216498]
[2024-05-18 05:43:36] 2024-05-18 12:43:24,543 | INFO     | zombie collector waiting for pid 216498
[2024-05-18 05:43:36] 2024-05-18 12:43:24,543 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 05:43:36] 2024-05-18 12:43:25,549 | INFO     | collected zombie processes
[2024-05-18 05:43:36] 2024-05-18 12:43:25,549 | INFO     | will now attempt to kill all subprocesses of pid=216498
[2024-05-18 05:43:36] 2024-05-18 12:43:25,622 | INFO     | process IDs to be killed: [216498] (in reverse order)
[2024-05-18 05:43:36] 2024-05-18 12:43:25,714 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 05:43:36] 2024-05-18 12:43:25,715 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 05:43:36] 2024-05-18 12:43:25,721 | INFO     | did not find any defunct processes belonging to 216498
[2024-05-18 05:43:36] 2024-05-18 12:43:25,727 | INFO     | did not find any defunct processes belonging to 216498
[2024-05-18 05:43:36] 2024-05-18 12:43:25,728 | INFO     | ready for new job
[2024-05-18 05:43:36] 2024-05-18 12:43:25,728 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 05:43:36] 2024-05-18 12:43:25,730 | INFO     | *************************************
[2024-05-18 05:43:36] 2024-05-18 12:43:25,731 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 05:43:36] 2024-05-18 12:43:25,731 | INFO     | *************************************
[2024-05-18 05:43:36] 2024-05-18 12:43:25,731 | INFO     | 
[2024-05-18 05:43:36] 2024-05-18 12:43:25,735 | INFO     | architecture information:
[2024-05-18 05:43:36] 2024-05-18 12:43:25,736 | INFO     | executing command: cat /etc/os-release
[2024-05-18 05:43:36] 2024-05-18 12:43:25,755 | INFO     | cat /etc/os-release:
[2024-05-18 05:43:36] NAME="CentOS Linux"
[2024-05-18 05:43:36] VERSION="7 (Core)"
[2024-05-18 05:43:36] ID="centos"
[2024-05-18 05:43:36] ID_LIKE="rhel fedora"
[2024-05-18 05:43:36] VERSION_ID="7"
[2024-05-18 05:43:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 05:43:36] ANSI_COLOR="0;31"
[2024-05-18 05:43:36] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 05:43:36] HOME_URL="https://www.centos.org/"
[2024-05-18 05:43:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 05:43:36] 
[2024-05-18 05:43:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 05:43:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 05:43:36] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 05:43:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 05:43:36] 
[2024-05-18 05:43:36] 2024-05-18 12:43:25,756 | INFO     | *************************************
[2024-05-18 05:43:36] 2024-05-18 12:43:26,259 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 05:43:36] 2024-05-18 12:43:26,285 | INFO     | sufficient remaining disk space (2183533690880 B)
[2024-05-18 05:43:36] 2024-05-18 12:43:26,285 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 05:43:36] 2024-05-18 12:43:26,285 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 05:43:36] 2024-05-18 12:43:26,286 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 05:43:36] 2024-05-18 12:43:26,288 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 05:43:36] 2024-05-18 12:43:26,288 | INFO     | aborting loop
[2024-05-18 05:43:36] 2024-05-18 12:43:26,583 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 05:43:36] 2024-05-18 12:43:26,584 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 05:43:36] 2024-05-18 12:43:26,584 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 05:43:36] 2024-05-18 12:43:26,911 | INFO     | all data control threads have been joined
[2024-05-18 05:43:36] 2024-05-18 12:43:27,286 | INFO     | [job] retrieve thread has finished
[2024-05-18 05:43:36] 2024-05-18 12:43:27,294 | INFO     | [job] job monitor thread has finished
[2024-05-18 05:43:36] 2024-05-18 12:43:27,296 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 05:43:36] 2024-05-18 12:43:27,594 | INFO     | [job] validate thread has finished
[2024-05-18 05:43:36] 2024-05-18 12:43:27,598 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 05:43:36] 2024-05-18 12:43:27,623 | INFO     | all payload control threads have been joined
[2024-05-18 05:43:36] 2024-05-18 12:43:27,712 | INFO     | [payload] failed_post thread has finished
[2024-05-18 05:43:36] 2024-05-18 12:43:27,730 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 05:43:36] 2024-05-18 12:43:27,780 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 05:43:36] 2024-05-18 12:43:27,829 | INFO     | all job control threads have been joined
[2024-05-18 05:43:36] 2024-05-18 12:43:27,917 | INFO     | [data] control thread has finished
[2024-05-18 05:43:36] 2024-05-18 12:43:28,177 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 05:43:36] 2024-05-18 12:43:28,197 | INFO     | [data] copytool_in thread has finished
[2024-05-18 05:43:36] 2024-05-18 12:43:28,506 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 05:43:36] 2024-05-18 12:43:28,630 | INFO     | [payload] control thread has finished
[2024-05-18 05:43:36] 2024-05-18 12:43:28,786 | INFO     | [payload] validate_post thread has finished
[2024-05-18 05:43:36] 2024-05-18 12:43:28,834 | INFO     | [job] control thread has finished
[2024-05-18 05:43:36] 2024-05-18 12:43:29,514 | INFO     | [job] queue monitor thread has finished
[2024-05-18 05:43:36] 2024-05-18 12:43:29,734 | INFO     | [data] copytool_out thread has finished
[2024-05-18 05:43:36] 2024-05-18 12:43:30,294 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 05:43:36] 2024-05-18 12:43:30,559 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140277350168384)>', '<ExcThread(monitor, started 140277137446656)>']
[2024-05-18 05:43:36] 2024-05-18 12:43:30,605 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 05:43:36] 2024-05-18 12:43:30,605 | INFO     | [monitor] control thread has ended
[2024-05-18 05:43:36] 2024-05-18 12:43:35,581 | INFO     | all workflow threads have been joined
[2024-05-18 05:43:36] 2024-05-18 12:43:35,581 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 05:43:36] 2024-05-18 12:43:35,581 | INFO     | traces error code: 0
[2024-05-18 05:43:36] 2024-05-18 12:43:35,582 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 05:43:36] 2024-05-18 12:43:35,672 [wrapper] ==== pilot stdout END ====
[2024-05-18 05:43:36] 2024-05-18 12:43:35,677 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 05:43:36] 2024-05-18 12:43:35,681 [wrapper] pilotpid: 209420
[2024-05-18 05:43:36] 2024-05-18 12:43:35,685 [wrapper] Pilot exit status: 0
[2024-05-18 05:43:36] 2024-05-18 12:43:35,699 [wrapper] pandaids: 6208324193
[2024-05-18 05:43:36] 2024-05-18 12:43:35,752 [wrapper] cleanup: SIGTERM to supervisor_pilot 144424 209421
[2024-05-18 05:43:36] 2024-05-18 12:43:35,755 [wrapper] Test setup, not cleaning
[2024-05-18 05:43:36] 2024-05-18 12:43:35,758 [wrapper] ==== wrapper stdout END ====
[2024-05-18 05:43:36] 2024-05-18 12:43:35,761 [wrapper] ==== wrapper stderr END ====
[2024-05-18 05:43:36] 2024-05-18 12:43:35,767 [wrapper] apfmon messages muted
[2024-05-18 05:43:36]  *** Error codes and diagnostics ***
[2024-05-18 05:43:36]     "exeErrorCode": 0,
[2024-05-18 05:43:36]     "exeErrorDiag": "",
[2024-05-18 05:43:36]     "pilotErrorCode": 0,
[2024-05-18 05:43:36]     "pilotErrorDiag": "",
[2024-05-18 05:43:36]  *** Listing of results directory ***
[2024-05-18 05:43:36] total 1760932
[2024-05-18 05:43:36] -rw-r--r-- 1 boinc boinc     467845 May 17 12:35 pilot3.tar.gz
[2024-05-18 05:43:36] -rw-r--r-- 1 boinc boinc       5633 May 17 12:46 queuedata.json
[2024-05-18 05:43:36] -rwx------ 1 boinc boinc      32251 May 17 12:47 runpilot2-wrapper.sh
[2024-05-18 05:43:36] -rw-r--r-- 1 boinc boinc        100 May 18 00:51 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 05:43:36] -rwxr-xr-x 1 boinc boinc       7986 May 18 00:51 run_atlas
[2024-05-18 05:43:36] -rw-r--r-- 1 boinc boinc        105 May 18 00:51 job.xml
[2024-05-18 05:43:36] -rw-r--r-- 2 boinc boinc  328306483 May 18 00:51 EVNT.38734051._000435.pool.root.1
[2024-05-18 05:43:36] -rw-r--r-- 1 boinc boinc       6627 May 18 00:51 init_data.xml
[2024-05-18 05:43:36] -rw-r--r-- 2 boinc boinc  329410991 May 18 00:51 EVNT.38734051._000436.pool.root.1
[2024-05-18 05:43:36] -rw-r--r-- 2 boinc boinc      17587 May 18 00:51 start_atlas.sh
[2024-05-18 05:43:36] drwxrwx--x 2 boinc boinc       4096 May 18 00:51 shared
[2024-05-18 05:43:36] -rw-r--r-- 2 boinc boinc     480255 May 18 00:51 input.tar.gz
[2024-05-18 05:43:36] -rw-r--r-- 1 boinc boinc          0 May 18 00:51 boinc_lockfile
[2024-05-18 05:43:36] -rw-r--r-- 1 boinc boinc       3368 May 18 00:51 pandaJob.out
[2024-05-18 05:43:36] -rw------- 1 boinc boinc        424 May 18 00:51 setup.sh.local
[2024-05-18 05:43:36] -rw------- 1 boinc boinc    1019073 May 18 00:51 agis_schedconf.cvmfs.json
[2024-05-18 05:43:36] -rw------- 1 boinc boinc    1324701 May 18 00:51 cric_ddmendpoints.json
[2024-05-18 05:43:36] drwx------ 4 boinc boinc       4096 May 18 00:51 pilot3
[2024-05-18 05:43:36] -rw-r--r-- 1 boinc boinc        532 May 18 05:32 boinc_task_state.xml
[2024-05-18 05:43:36] -rw------- 1 boinc boinc 1133708064 May 18 05:42 HITS.38734053._007893.pool.root.1
[2024-05-18 05:43:36] -rw------- 1 boinc boinc       1063 May 18 05:43 memory_monitor_summary.json
[2024-05-18 05:43:36] -rw------- 1 boinc boinc          0 May 18 05:43 agis_ddmendpoints.agis.ALL.json
[2024-05-18 05:43:36] -rw------- 1 boinc boinc    2328759 May 18 05:43 log.38734053._007893.job.log.tgz.1
[2024-05-18 05:43:36] -rw-r--r-- 1 boinc boinc         29 May 18 05:43 wrapper_checkpoint.txt
[2024-05-18 05:43:36] -rw-r--r-- 1 boinc boinc       8192 May 18 05:43 boinc_mmap_file
[2024-05-18 05:43:36] -rw------- 1 boinc boinc         95 May 18 05:43 pilot_heartbeat.json
[2024-05-18 05:43:36] -rw------- 1 boinc boinc      27972 May 18 05:43 heartbeat.json
[2024-05-18 05:43:36] -rw------- 1 boinc boinc       4210 May 18 05:43 pilotlog.txt
[2024-05-18 05:43:36] -rw------- 1 boinc boinc    1764224 May 18 05:43 log.38734053._007893.job.log.1
[2024-05-18 05:43:36] -rw------- 1 boinc boinc        353 May 18 05:43 output.list
[2024-05-18 05:43:36] -rw-r--r-- 1 boinc boinc        620 May 18 05:43 runtime_log
[2024-05-18 05:43:36] -rw------- 1 boinc boinc    4136960 May 18 05:43 result.tar.gz
[2024-05-18 05:43:36] -rw-r--r-- 1 boinc boinc      11339 May 18 05:43 runtime_log.err
[2024-05-18 05:43:36] -rw------- 1 boinc boinc        661 May 18 05:43 lRqMDm4iIS5n7Olcko1bjSoqABFKDmABFKDmOtvXDmSuZKDmrzm1fn.diag
[2024-05-18 05:43:36] -rw-r--r-- 1 boinc boinc      22189 May 18 05:43 stderr.txt
[2024-05-18 05:43:36] HITS file was successfully produced:
[2024-05-18 05:43:36] -rw------- 1 boinc boinc 1133708064 May 18 05:42 shared/HITS.pool.root.1
[2024-05-18 05:43:36]  *** Contents of shared directory: ***
[2024-05-18 05:43:36] total 1753988
[2024-05-18 05:43:36] -rw-r--r-- 2 boinc boinc  328306483 May 18 00:51 ATLAS.root_0
[2024-05-18 05:43:36] -rw-r--r-- 2 boinc boinc  329410991 May 18 00:51 ATLAS.root_1
[2024-05-18 05:43:36] -rw-r--r-- 2 boinc boinc      17587 May 18 00:51 start_atlas.sh
[2024-05-18 05:43:36] -rw-r--r-- 2 boinc boinc     480255 May 18 00:51 input.tar.gz
[2024-05-18 05:43:36] -rw------- 1 boinc boinc 1133708064 May 18 05:42 HITS.pool.root.1
[2024-05-18 05:43:36] -rw------- 1 boinc boinc    4136960 May 18 05:43 result.tar.gz
05:43:38 (205247): run_atlas exited; CPU time 178682.208792
05:43:38 (205247): called boinc_finish(0)

</stderr_txt>
]]>

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