Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
01:16:46 (178544): wrapper (7.7.26015): starting
01:16:46 (178544): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 01:16:46] Arguments: --nthreads 12
[2024-05-18 01:16:46] Threads: 12
[2024-05-18 01:16:46] Checking for CVMFS
[2024-05-18 01:16:46] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 01:16:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 01:16:46] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 01:16:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 01:16:46] 2.10.1.0 152792 184663 151920 132872 1 185 41472809 45568000 11883 130560 0 1208317546 99.765 747852701 15876 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-05-18 01:16:46] CVMFS is ok
[2024-05-18 01:16:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 01:16:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 01:16:46] Further information can be found at the LHC@home message board.
[2024-05-18 01:16:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 01:16:46] Checking for apptainer binary...
[2024-05-18 01:16:46] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 01:16:46] Running /usr/bin/apptainer --version
[2024-05-18 01:16:46] apptainer version 1.1.8-1.el7
[2024-05-18 01:16:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 01:16:48] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0064.triumf.lcg
[2024-05-18 01:16:48] apptainer works
[2024-05-18 01:16:48] Set ATHENA_PROC_NUMBER=12
[2024-05-18 01:16:48] Set ATHENA_CORE_NUMBER=12
[2024-05-18 01:16:48] Starting ATLAS job with PandaID=6208323505
[2024-05-18 01:16:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 06:19:59]  *** The last 200 lines of the pilot log: ***
[2024-05-18 06:19:59] 2024-05-18 13:19:36,556 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-18 06:19:59] 2024-05-18 13:19:37,989 | INFO     | job 6208323505 has state=finished
[2024-05-18 06:19:59] 2024-05-18 13:19:37,990 | INFO     | preparing for final server update for job 6208323505 in state='finished'
[2024-05-18 06:19:59] 2024-05-18 13:19:37,990 | INFO     | this job has now completed (state=finished)
[2024-05-18 06:19:59] 2024-05-18 13:19:37,990 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-18 06:19:59] 2024-05-18 13:19:37,990 | INFO     | job 6208323505 has finished - writing final server update
[2024-05-18 06:19:59] 2024-05-18 13:19:37,990 | INFO     | total number of processed events: 1950 (read)
[2024-05-18 06:19:59] 2024-05-18 13:19:37,994 | INFO     | executing command: lscpu
[2024-05-18 06:19:59] 2024-05-18 13:19:38,058 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-18 06:19:59] 2024-05-18 13:19:38,059 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 06:19:59] 2024-05-18 13:19:38,103 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 06:19:59] 2024-05-18 13:19:38,645 | INFO     | monitor loop #1405: job 0:6208323505 is in state 'finished'
[2024-05-18 06:19:59] 2024-05-18 13:19:38,646 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 06:19:59] 2024-05-18 13:19:39,779 | INFO     | 18163s have passed since pilot start
[2024-05-18 06:19:59] 2024-05-18 13:19:41,148 | INFO     | monitor loop #1406: job 0:6208323505 is in state 'finished'
[2024-05-18 06:19:59] 2024-05-18 13:19:41,148 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 06:19:59] 2024-05-18 13:19:41,507 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-18 06:19:59] 2024-05-18 13:19:41,508 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6208323505/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 06:19:59] 2024-05-18 13:19:41,512 | INFO     | extracted standard info from prmon json
[2024-05-18 06:19:59] 2024-05-18 13:19:41,513 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 06:19:59] 2024-05-18 13:19:41,513 | WARNING  | GPU info not found in prmon json
[2024-05-18 06:19:59] 2024-05-18 13:19:41,521 | INFO     | fitting pss+swap vs Time
[2024-05-18 06:19:59] 2024-05-18 13:19:41,522 | INFO     | model: linear, x: [1716020244.0, 1716020305.0, 1716020366.0, 1716020427.0, 1716020488.0, 1716020549.0, 1716020610.0, 1716020671.0, 1716020732.0, 1716020793.0, 1716
[2024-05-18 06:19:59] 2024-05-18 13:19:41,522 | INFO     | sum of square deviations: 8205826414.5
[2024-05-18 06:19:59] 2024-05-18 13:19:41,525 | INFO     | sum of deviations: 651537329935.0001
[2024-05-18 06:19:59] 2024-05-18 13:19:41,525 | INFO     | mean x: 1716029302.5
[2024-05-18 06:19:59] 2024-05-18 13:19:41,525 | INFO     | mean y: 3679760.275167785
[2024-05-18 06:19:59] 2024-05-18 13:19:41,525 | INFO     | -- intersect: -136247941144.7713
[2024-05-18 06:19:59] 2024-05-18 13:19:41,525 | INFO     | intersect: -136247941144.7713
[2024-05-18 06:19:59] 2024-05-18 13:19:41,526 | INFO     | chi2: 24.772833381858163
[2024-05-18 06:19:59] 2024-05-18 13:19:41,526 | INFO     | model: linear, x: [1716020244.0, 1716020305.0, 1716020366.0, 1716020427.0, 1716020488.0, 1716020549.0, 1716020610.0, 1716020671.0, 1716020732.0, 1716020793.0, 1716
[2024-05-18 06:19:59] 2024-05-18 13:19:41,526 | INFO     | sum of square deviations: 7799669962.0
[2024-05-18 06:19:59] 2024-05-18 13:19:41,529 | INFO     | sum of deviations: 788610442927.9999
[2024-05-18 06:19:59] 2024-05-18 13:19:41,529 | INFO     | mean x: 1716029150.0
[2024-05-18 06:19:59] 2024-05-18 13:19:41,529 | INFO     | mean y: 3731207.4505119454
[2024-05-18 06:19:59] 2024-05-18 13:19:41,529 | INFO     | -- intersect: -173500854839.39935
[2024-05-18 06:19:59] 2024-05-18 13:19:41,529 | INFO     | intersect: -173500854839.39935
[2024-05-18 06:19:59] 2024-05-18 13:19:41,530 | INFO     | chi2: 20.822858315436896
[2024-05-18 06:19:59] 2024-05-18 13:19:41,530 | INFO     | current chi2=20.822858315436896 (change=15.944785182763729 %)
[2024-05-18 06:19:59] 2024-05-18 13:19:41,530 | INFO     | right removable region: 292
[2024-05-18 06:19:59] 2024-05-18 13:19:41,530 | INFO     | model: linear, x: [1716020549.0, 1716020610.0, 1716020671.0, 1716020732.0, 1716020793.0, 1716020854.0, 1716020915.0, 1716020976.0, 1716021037.0, 1716021098.0, 1716
[2024-05-18 06:19:59] 2024-05-18 13:19:41,531 | INFO     | sum of square deviations: 7799669962.0
[2024-05-18 06:19:59] 2024-05-18 13:19:41,533 | INFO     | sum of deviations: 512699779803.00006
[2024-05-18 06:19:59] 2024-05-18 13:19:41,533 | INFO     | mean x: 1716029455.0
[2024-05-18 06:19:59] 2024-05-18 13:19:41,533 | INFO     | mean y: 3731855.4129692833
[2024-05-18 06:19:59] 2024-05-18 13:19:41,533 | INFO     | -- intersect: -112796928685.40317
[2024-05-18 06:19:59] 2024-05-18 13:19:41,533 | INFO     | intersect: -112796928685.40317
[2024-05-18 06:19:59] 2024-05-18 13:19:41,534 | INFO     | chi2: 20.884269372532888
[2024-05-18 06:19:59] 2024-05-18 13:19:41,534 | INFO     | current chi2=20.884269372532888 (change=15.69688839942297 %)
[2024-05-18 06:19:59] 2024-05-18 13:19:41,534 | INFO     | left removable region: 10
[2024-05-18 06:19:59] 2024-05-18 13:19:41,534 | INFO     | model: linear, x: [1716020854.0, 1716020915.0, 1716020976.0, 1716021037.0, 1716021098.0, 1716021159.0, 1716021220.0, 1716021281.0, 1716021342.0, 1716021403.0, 1716
[2024-05-18 06:19:59] 2024-05-18 13:19:41,534 | INFO     | sum of square deviations: 6953769450.5
[2024-05-18 06:19:59] 2024-05-18 13:19:41,537 | INFO     | sum of deviations: 551629930454.0
[2024-05-18 06:19:59] 2024-05-18 13:19:41,537 | INFO     | mean x: 1716029424.5
[2024-05-18 06:19:59] 2024-05-18 13:19:41,537 | INFO     | mean y: 3846524.361702128
[2024-05-18 06:19:59] 2024-05-18 13:19:41,537 | INFO     | -- intersect: -136125658319.3584
[2024-05-18 06:19:59] 2024-05-18 13:19:41,537 | INFO     | intersect: -136125658319.3584
[2024-05-18 06:19:59] 2024-05-18 13:19:41,538 | INFO     | chi2: 13.21066006743067
[2024-05-18 06:19:59] 2024-05-18 13:19:41,538 | INFO     | -- intersect: -136125658319.3584
[2024-05-18 06:19:59] 2024-05-18 13:19:41,538 | INFO     | current memory leak: 79.33 B/s (using 282 data points, chi2=13.21)
[2024-05-18 06:19:59] 2024-05-18 13:19:41,539 | INFO     | ..............................
[2024-05-18 06:19:59] 2024-05-18 13:19:41,539 | INFO     | . Timing measurements:
[2024-05-18 06:19:59] 2024-05-18 13:19:41,539 | INFO     | . get job = 0 s
[2024-05-18 06:19:59] 2024-05-18 13:19:41,539 | INFO     | . initial setup = 1 s
[2024-05-18 06:19:59] 2024-05-18 13:19:41,539 | INFO     | . payload setup = 7 s
[2024-05-18 06:19:59] 2024-05-18 13:19:41,539 | INFO     | . stage-in = 0 s
[2024-05-18 06:19:59] 2024-05-18 13:19:41,539 | INFO     | . payload execution = 18124 s
[2024-05-18 06:19:59] 2024-05-18 13:19:41,539 | INFO     | . stage-out = 3 s
[2024-05-18 06:19:59] 2024-05-18 13:19:41,539 | INFO     | . log creation = 0 s
[2024-05-18 06:19:59] 2024-05-18 13:19:41,539 | INFO     | ..............................
[2024-05-18 06:19:59] 2024-05-18 13:19:41,624 | INFO     | 
[2024-05-18 06:19:59] 2024-05-18 13:19:41,624 | INFO     | job summary report
[2024-05-18 06:19:59] 2024-05-18 13:19:41,624 | INFO     | --------------------------------------------------
[2024-05-18 06:19:59] 2024-05-18 13:19:41,624 | INFO     | PanDA job id: 6208323505
[2024-05-18 06:19:59] 2024-05-18 13:19:41,624 | INFO     | task id: 38734053
[2024-05-18 06:19:59] 2024-05-18 13:19:41,624 | INFO     | errors: (none)
[2024-05-18 06:19:59] 2024-05-18 13:19:41,625 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 06:19:59] 2024-05-18 13:19:41,625 | INFO     | pilot state: finished 
[2024-05-18 06:19:59] 2024-05-18 13:19:41,625 | INFO     | transexitcode: 0
[2024-05-18 06:19:59] 2024-05-18 13:19:41,625 | INFO     | exeerrorcode: 0
[2024-05-18 06:19:59] 2024-05-18 13:19:41,625 | INFO     | exeerrordiag: 
[2024-05-18 06:19:59] 2024-05-18 13:19:41,625 | INFO     | exitcode: 0
[2024-05-18 06:19:59] 2024-05-18 13:19:41,625 | INFO     | exitmsg: OK
[2024-05-18 06:19:59] 2024-05-18 13:19:41,625 | INFO     | cpuconsumptiontime: 188038 s
[2024-05-18 06:19:59] 2024-05-18 13:19:41,625 | INFO     | nevents: 1950
[2024-05-18 06:19:59] 2024-05-18 13:19:41,625 | INFO     | neventsw: 0
[2024-05-18 06:19:59] 2024-05-18 13:19:41,625 | INFO     | pid: 207875
[2024-05-18 06:19:59] 2024-05-18 13:19:41,625 | INFO     | pgrp: 207875
[2024-05-18 06:19:59] 2024-05-18 13:19:41,625 | INFO     | corecount: 12
[2024-05-18 06:19:59] 2024-05-18 13:19:41,626 | INFO     | event service: False
[2024-05-18 06:19:59] 2024-05-18 13:19:41,626 | INFO     | sizes: {0: 2392465, 1: 2392664, 5: 2392870, 11: 2392926, 18135: 2445449, 18136: 2445448, 18141: 2454586, 18144: 2454642, 18149: 2454864}
[2024-05-18 06:19:59] 2024-05-18 13:19:41,626 | INFO     | --------------------------------------------------
[2024-05-18 06:19:59] 2024-05-18 13:19:41,626 | INFO     | 
[2024-05-18 06:19:59] 2024-05-18 13:19:41,626 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 06:19:59] 2024-05-18 13:19:41,649 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 06:19:59] 2024-05-18 13:19:41,650 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 06:19:59] 2024-05-18 13:19:41,650 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 06:19:59] 2024-05-18 13:19:41,650 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 06:19:59] 2024-05-18 13:19:41,650 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 06:19:59] 2024-05-18 13:19:41,650 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 06:19:59] 2024-05-18 13:19:41,650 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 06:19:59] 2024-05-18 13:19:41,651 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 06:19:59] 2024-05-18 13:19:41,651 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 06:19:59] 2024-05-18 13:19:41,651 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 06:19:59] 2024-05-18 13:19:41,651 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 06:19:59] 2024-05-18 13:19:41,651 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 06:19:59] 2024-05-18 13:19:41,651 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 06:19:59] 2024-05-18 13:19:41,651 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 06:19:59] 2024-05-18 13:19:41,651 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 06:19:59] 2024-05-18 13:19:41,652 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 06:19:59] 2024-05-18 13:19:41,652 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 06:19:59] 2024-05-18 13:19:41,652 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 06:19:59] 2024-05-18 13:19:41,652 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 06:19:59] 2024-05-18 13:19:41,652 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 06:19:59] 2024-05-18 13:19:41,652 | INFO     | job 6208323505 has completed (purged errors)
[2024-05-18 06:19:59] 2024-05-18 13:19:41,653 | INFO     | overall cleanup function is called
[2024-05-18 06:19:59] 2024-05-18 13:19:42,674 | INFO     | --- collectZombieJob: --- 10, [207875]
[2024-05-18 06:19:59] 2024-05-18 13:19:42,674 | INFO     | zombie collector waiting for pid 207875
[2024-05-18 06:19:59] 2024-05-18 13:19:42,675 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 06:19:59] 2024-05-18 13:19:43,676 | INFO     | collected zombie processes
[2024-05-18 06:19:59] 2024-05-18 13:19:43,676 | INFO     | will now attempt to kill all subprocesses of pid=207875
[2024-05-18 06:19:59] 2024-05-18 13:19:43,831 | INFO     | process IDs to be killed: [207875] (in reverse order)
[2024-05-18 06:19:59] 2024-05-18 13:19:43,933 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 06:19:59] 2024-05-18 13:19:43,934 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 06:19:59] 2024-05-18 13:19:43,939 | INFO     | did not find any defunct processes belonging to 207875
[2024-05-18 06:19:59] 2024-05-18 13:19:43,944 | INFO     | did not find any defunct processes belonging to 207875
[2024-05-18 06:19:59] 2024-05-18 13:19:43,945 | INFO     | ready for new job
[2024-05-18 06:19:59] 2024-05-18 13:19:43,945 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 06:19:59] 2024-05-18 13:19:43,947 | INFO     | *************************************
[2024-05-18 06:19:59] 2024-05-18 13:19:43,947 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 06:19:59] 2024-05-18 13:19:43,947 | INFO     | *************************************
[2024-05-18 06:19:59] 2024-05-18 13:19:43,947 | INFO     | 
[2024-05-18 06:19:59] 2024-05-18 13:19:43,949 | INFO     | architecture information:
[2024-05-18 06:19:59] 2024-05-18 13:19:43,950 | INFO     | executing command: cat /etc/os-release
[2024-05-18 06:19:59] 2024-05-18 13:19:43,966 | INFO     | cat /etc/os-release:
[2024-05-18 06:19:59] NAME="CentOS Linux"
[2024-05-18 06:19:59] VERSION="7 (Core)"
[2024-05-18 06:19:59] ID="centos"
[2024-05-18 06:19:59] ID_LIKE="rhel fedora"
[2024-05-18 06:19:59] VERSION_ID="7"
[2024-05-18 06:19:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 06:19:59] ANSI_COLOR="0;31"
[2024-05-18 06:19:59] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 06:19:59] HOME_URL="https://www.centos.org/"
[2024-05-18 06:19:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 06:19:59] 
[2024-05-18 06:19:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 06:19:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 06:19:59] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 06:19:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 06:19:59] 
[2024-05-18 06:19:59] 2024-05-18 13:19:43,967 | INFO     | *************************************
[2024-05-18 06:19:59] 2024-05-18 13:19:44,470 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 06:19:59] 2024-05-18 13:19:44,496 | INFO     | sufficient remaining disk space (2114206040064 B)
[2024-05-18 06:19:59] 2024-05-18 13:19:44,497 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 06:19:59] 2024-05-18 13:19:44,497 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 06:19:59] 2024-05-18 13:19:44,497 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 06:19:59] 2024-05-18 13:19:44,655 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 06:19:59] 2024-05-18 13:19:44,655 | INFO     | aborting loop
[2024-05-18 06:19:59] 2024-05-18 13:19:44,791 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 06:19:59] 2024-05-18 13:19:44,791 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 06:19:59] 2024-05-18 13:19:44,792 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 06:19:59] 2024-05-18 13:19:44,952 | INFO     | all job control threads have been joined
[2024-05-18 06:19:59] 2024-05-18 13:19:45,355 | INFO     | all data control threads have been joined
[2024-05-18 06:19:59] 2024-05-18 13:19:45,502 | INFO     | [job] retrieve thread has finished
[2024-05-18 06:19:59] 2024-05-18 13:19:45,656 | INFO     | [job] job monitor thread has finished
[2024-05-18 06:19:59] 2024-05-18 13:19:45,790 | INFO     | all payload control threads have been joined
[2024-05-18 06:19:59] 2024-05-18 13:19:45,956 | INFO     | [job] control thread has finished
[2024-05-18 06:19:59] 2024-05-18 13:19:46,361 | INFO     | [data] control thread has finished
[2024-05-18 06:19:59] 2024-05-18 13:19:46,478 | INFO     | [data] copytool_in thread has finished
[2024-05-18 06:19:59] 2024-05-18 13:19:46,502 | INFO     | [data] copytool_out thread has finished
[2024-05-18 06:19:59] 2024-05-18 13:19:46,634 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 06:19:59] 2024-05-18 13:19:46,696 | INFO     | [payload] failed_post thread has finished
[2024-05-18 06:19:59] 2024-05-18 13:19:46,737 | INFO     | [job] validate thread has finished
[2024-05-18 06:19:59] 2024-05-18 13:19:46,749 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 06:19:59] 2024-05-18 13:19:46,796 | INFO     | [payload] control thread has finished
[2024-05-18 06:19:59] 2024-05-18 13:19:46,798 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 06:19:59] 2024-05-18 13:19:46,842 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 06:19:59] 2024-05-18 13:19:46,948 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 06:19:59] 2024-05-18 13:19:47,065 | INFO     | [payload] validate_post thread has finished
[2024-05-18 06:19:59] 2024-05-18 13:19:47,106 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 06:19:59] 2024-05-18 13:19:47,635 | INFO     | [job] queue monitor thread has finished
[2024-05-18 06:19:59] 2024-05-18 13:19:51,112 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 06:19:59] 2024-05-18 13:19:52,980 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139753616975680)>', '<ExcThread(monitor, started 139753068427008)>']
[2024-05-18 06:19:59] 2024-05-18 13:19:53,829 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 06:19:59] 2024-05-18 13:19:53,830 | INFO     | [monitor] control thread has ended
[2024-05-18 06:19:59] 2024-05-18 13:19:57,999 | INFO     | all workflow threads have been joined
[2024-05-18 06:19:59] 2024-05-18 13:19:57,999 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 06:19:59] 2024-05-18 13:19:58,000 | INFO     | traces error code: 0
[2024-05-18 06:19:59] 2024-05-18 13:19:58,000 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 06:19:59] 2024-05-18 13:19:58,104 [wrapper] ==== pilot stdout END ====
[2024-05-18 06:19:59] 2024-05-18 13:19:58,107 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 06:19:59] 2024-05-18 13:19:58,110 [wrapper] pilotpid: 186839
[2024-05-18 06:19:59] 2024-05-18 13:19:58,113 [wrapper] Pilot exit status: 0
[2024-05-18 06:19:59] 2024-05-18 13:19:58,122 [wrapper] pandaids: 6208323505
[2024-05-18 06:19:59] 2024-05-18 13:19:58,203 [wrapper] cleanup: SIGTERM to supervisor_pilot  93532 186840
[2024-05-18 06:19:59] 2024-05-18 13:19:58,206 [wrapper] Test setup, not cleaning
[2024-05-18 06:19:59] 2024-05-18 13:19:58,209 [wrapper] ==== wrapper stdout END ====
[2024-05-18 06:19:59] 2024-05-18 13:19:58,212 [wrapper] ==== wrapper stderr END ====
[2024-05-18 06:19:59] 2024-05-18 13:19:58,217 [wrapper] apfmon messages muted
[2024-05-18 06:19:59]  *** Error codes and diagnostics ***
[2024-05-18 06:19:59]     "exeErrorCode": 0,
[2024-05-18 06:19:59]     "exeErrorDiag": "",
[2024-05-18 06:19:59]     "pilotErrorCode": 0,
[2024-05-18 06:19:59]     "pilotErrorDiag": "",
[2024-05-18 06:19:59]  *** Listing of results directory ***
[2024-05-18 06:19:59] total 1491264
[2024-05-18 06:19:59] -rw-r--r-- 1 boinc boinc     467845 May 17 12:35 pilot3.tar.gz
[2024-05-18 06:19:59] -rw-r--r-- 1 boinc boinc       5633 May 17 12:41 queuedata.json
[2024-05-18 06:19:59] -rwx------ 1 boinc boinc      32251 May 17 12:42 runpilot2-wrapper.sh
[2024-05-18 06:19:59] -rw-r--r-- 1 boinc boinc        100 May 18 01:16 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 06:19:59] -rwxr-xr-x 1 boinc boinc       7986 May 18 01:16 run_atlas
[2024-05-18 06:19:59] -rw-r--r-- 1 boinc boinc        105 May 18 01:16 job.xml
[2024-05-18 06:19:59] -rw-r--r-- 1 boinc boinc       6627 May 18 01:16 init_data.xml
[2024-05-18 06:19:59] -rw-r--r-- 2 boinc boinc  329382820 May 18 01:16 EVNT.38734051._000424.pool.root.1
[2024-05-18 06:19:59] -rw-r--r-- 2 boinc boinc      17537 May 18 01:16 start_atlas.sh
[2024-05-18 06:19:59] drwxrwx--x 2 boinc boinc       4096 May 18 01:16 shared
[2024-05-18 06:19:59] -rw-r--r-- 2 boinc boinc     480180 May 18 01:16 input.tar.gz
[2024-05-18 06:19:59] -rw-r--r-- 1 boinc boinc          0 May 18 01:16 boinc_lockfile
[2024-05-18 06:19:59] -rw-r--r-- 1 boinc boinc       2852 May 18 01:16 pandaJob.out
[2024-05-18 06:19:59] -rw------- 1 boinc boinc        424 May 18 01:16 setup.sh.local
[2024-05-18 06:19:59] -rw------- 1 boinc boinc    1019073 May 18 01:16 agis_schedconf.cvmfs.json
[2024-05-18 06:19:59] -rw------- 1 boinc boinc    1324701 May 18 01:16 cric_ddmendpoints.json
[2024-05-18 06:19:59] drwx------ 4 boinc boinc       4096 May 18 01:16 pilot3
[2024-05-18 06:19:59] -rw-r--r-- 1 boinc boinc        532 May 18 06:08 boinc_task_state.xml
[2024-05-18 06:19:59] -rw------- 1 boinc boinc 1185673445 May 18 06:19 HITS.38734053._007868.pool.root.1
[2024-05-18 06:19:59] -rw------- 1 boinc boinc       1079 May 18 06:19 memory_monitor_summary.json
[2024-05-18 06:19:59] -rw------- 1 boinc boinc          0 May 18 06:19 agis_ddmendpoints.agis.ALL.json
[2024-05-18 06:19:59] -rw------- 1 boinc boinc    2367419 May 18 06:19 log.38734053._007868.job.log.tgz.1
[2024-05-18 06:19:59] -rw------- 1 boinc boinc         95 May 18 06:19 pilot_heartbeat.json
[2024-05-18 06:19:59] -rw------- 1 boinc boinc      27924 May 18 06:19 heartbeat.json
[2024-05-18 06:19:59] -rw-r--r-- 1 boinc boinc         29 May 18 06:19 wrapper_checkpoint.txt
[2024-05-18 06:19:59] -rw-r--r-- 1 boinc boinc       8192 May 18 06:19 boinc_mmap_file
[2024-05-18 06:19:59] -rw------- 1 boinc boinc       4210 May 18 06:19 pilotlog.txt
[2024-05-18 06:19:59] -rw------- 1 boinc boinc    1846236 May 18 06:19 log.38734053._007868.job.log.1
[2024-05-18 06:19:59] -rw------- 1 boinc boinc        353 May 18 06:19 output.list
[2024-05-18 06:19:59] -rw-r--r-- 1 boinc boinc        620 May 18 06:19 runtime_log
[2024-05-18 06:19:59] -rw------- 1 boinc boinc    4249600 May 18 06:19 result.tar.gz
[2024-05-18 06:19:59] -rw-r--r-- 1 boinc boinc      11287 May 18 06:19 runtime_log.err
[2024-05-18 06:19:59] -rw------- 1 boinc boinc        662 May 18 06:19 jpSKDmoeIS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmBURKDmzbW9Kn.diag
[2024-05-18 06:19:59] -rw-r--r-- 1 boinc boinc      22143 May 18 06:19 stderr.txt
[2024-05-18 06:19:59] HITS file was successfully produced:
[2024-05-18 06:19:59] -rw------- 1 boinc boinc 1185673445 May 18 06:19 shared/HITS.pool.root.1
[2024-05-18 06:19:59]  *** Contents of shared directory: ***
[2024-05-18 06:19:59] total 1484204
[2024-05-18 06:19:59] -rw-r--r-- 2 boinc boinc  329382820 May 18 01:16 ATLAS.root_0
[2024-05-18 06:19:59] -rw-r--r-- 2 boinc boinc      17537 May 18 01:16 start_atlas.sh
[2024-05-18 06:19:59] -rw-r--r-- 2 boinc boinc     480180 May 18 01:16 input.tar.gz
[2024-05-18 06:19:59] -rw------- 1 boinc boinc 1185673445 May 18 06:19 HITS.pool.root.1
[2024-05-18 06:19:59] -rw------- 1 boinc boinc    4249600 May 18 06:19 result.tar.gz
06:20:00 (178544): run_atlas exited; CPU time 186236.099340
06:20:00 (178544): called boinc_finish(0)

</stderr_txt>
]]>

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