Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:17:39 (2126630): wrapper (7.7.26015): starting
15:17:39 (2126630): wrapper: running run_atlas (--nthreads 4)
[2024-05-20 15:17:39] Arguments: --nthreads 4
[2024-05-20 15:17:39] Threads: 4
[2024-05-20 15:17:39] Checking for CVMFS
[2024-05-20 15:17:39] No cvmfs_config command found, will try listing directly
[2024-05-20 15:17:39] CVMFS is ok
[2024-05-20 15:17:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-20 15:17:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-20 15:17:39] Further information can be found at the LHC@home message board.
[2024-05-20 15:17:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-20 15:17:39] Checking for apptainer binary...
[2024-05-20 15:17:39] which: no apptainer in ((null))
[2024-05-20 15:17:39] apptainer is not installed, using version from CVMFS
[2024-05-20 15:17:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-20 15:17:40] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut32.grid.cesnet.cz
[2024-05-20 15:17:40] apptainer works
[2024-05-20 15:17:40] Set ATHENA_PROC_NUMBER=4
[2024-05-20 15:17:40] Set ATHENA_CORE_NUMBER=4
[2024-05-20 15:17:40] Starting ATLAS job with PandaID=6208281153
[2024-05-20 15:17:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-20 20:59:52]  *** The last 200 lines of the pilot log: ***
[2024-05-20 20:59:52] 2024-05-20 18:59:37,634 | INFO     | fitting pss+swap vs Time
[2024-05-20 20:59:52] 2024-05-20 18:59:37,634 | INFO     | model: linear, x: [1716211089.0, 1716211150.0, 1716211211.0, 1716211272.0, 1716211333.0, 1716211394.0, 1716211455.0, 1716211516.0, 1716211577.0, 1716211638.0, 1716
[2024-05-20 20:59:52] 2024-05-20 18:59:37,635 | INFO     | sum of square deviations: 11762304260.0
[2024-05-20 20:59:52] 2024-05-20 18:59:37,638 | INFO     | sum of deviations: 60523208536.500015
[2024-05-20 20:59:52] 2024-05-20 18:59:37,638 | INFO     | mean x: 1716221306.5
[2024-05-20 20:59:52] 2024-05-20 18:59:37,638 | INFO     | mean y: 2372002.967261905
[2024-05-20 20:59:52] 2024-05-20 18:59:37,639 | INFO     | -- intersect: -8828484411.90361
[2024-05-20 20:59:52] 2024-05-20 18:59:37,639 | INFO     | intersect: -8828484411.90361
[2024-05-20 20:59:52] 2024-05-20 18:59:37,639 | INFO     | chi2: 3.7328877981631896
[2024-05-20 20:59:52] 2024-05-20 18:59:37,640 | INFO     | model: linear, x: [1716211089.0, 1716211150.0, 1716211211.0, 1716211272.0, 1716211333.0, 1716211394.0, 1716211455.0, 1716211516.0, 1716211577.0, 1716211638.0, 1716
[2024-05-20 20:59:52] 2024-05-20 18:59:37,640 | INFO     | sum of square deviations: 11244973630.0
[2024-05-20 20:59:52] 2024-05-20 18:59:37,643 | INFO     | sum of deviations: 59515709386.99997
[2024-05-20 20:59:52] 2024-05-20 18:59:37,643 | INFO     | mean x: 1716221154.0
[2024-05-20 20:59:52] 2024-05-20 18:59:37,644 | INFO     | mean y: 2371705.9456193354
[2024-05-20 20:59:52] 2024-05-20 18:59:37,644 | INFO     | -- intersect: -9080986139.624153
[2024-05-20 20:59:52] 2024-05-20 18:59:37,644 | INFO     | intersect: -9080986139.624153
[2024-05-20 20:59:52] 2024-05-20 18:59:37,644 | INFO     | chi2: 3.7347488502317483
[2024-05-20 20:59:52] 2024-05-20 18:59:37,644 | INFO     | current chi2=3.7347488502317483 (change=-0.04985555873054744 %)
[2024-05-20 20:59:52] 2024-05-20 18:59:37,645 | INFO     | right removable region: 330
[2024-05-20 20:59:52] 2024-05-20 18:59:37,645 | INFO     | model: linear, x: [1716211394.0, 1716211455.0, 1716211516.0, 1716211577.0, 1716211638.0, 1716211699.0, 1716211760.0, 1716211821.0, 1716211882.0, 1716211943.0, 1716
[2024-05-20 20:59:52] 2024-05-20 18:59:37,645 | INFO     | sum of square deviations: 11244973630.0
[2024-05-20 20:59:52] 2024-05-20 18:59:37,649 | INFO     | sum of deviations: -14086652834.999992
[2024-05-20 20:59:52] 2024-05-20 18:59:37,649 | INFO     | mean x: 1716221459.0
[2024-05-20 20:59:52] 2024-05-20 18:59:37,649 | INFO     | mean y: 2393950.4622356496
[2024-05-20 20:59:52] 2024-05-20 18:59:37,649 | INFO     | -- intersect: 2152315922.392211
[2024-05-20 20:59:52] 2024-05-20 18:59:37,649 | INFO     | intersect: 2152315922.392211
[2024-05-20 20:59:52] 2024-05-20 18:59:37,650 | INFO     | chi2: 1.5016592082035665
[2024-05-20 20:59:52] 2024-05-20 18:59:37,650 | INFO     | current chi2=1.5016592082035665 (change=59.772184716013285 %)
[2024-05-20 20:59:52] 2024-05-20 18:59:37,650 | INFO     | model: linear, x: [1716211699.0, 1716211760.0, 1716211821.0, 1716211882.0, 1716211943.0, 1716212004.0, 1716212065.0, 1716212126.0, 1716212187.0, 1716212248.0, 1716
[2024-05-20 20:59:52] 2024-05-20 18:59:37,651 | INFO     | sum of square deviations: 10743038637.5
[2024-05-20 20:59:52] 2024-05-20 18:59:37,653 | INFO     | sum of deviations: -70832251937.99998
[2024-05-20 20:59:52] 2024-05-20 18:59:37,653 | INFO     | mean x: 1716221611.5
[2024-05-20 20:59:52] 2024-05-20 18:59:37,654 | INFO     | mean y: 2411191.0981595092
[2024-05-20 20:59:52] 2024-05-20 18:59:37,654 | INFO     | -- intersect: 11318003145.0239
[2024-05-20 20:59:52] 2024-05-20 18:59:37,654 | INFO     | intersect: 11318003145.0239
[2024-05-20 20:59:52] 2024-05-20 18:59:37,654 | INFO     | chi2: 0.30330084085841286
[2024-05-20 20:59:52] 2024-05-20 18:59:37,654 | INFO     | current chi2=0.30330084085841286 (change=79.80228541859033 %)
[2024-05-20 20:59:52] 2024-05-20 18:59:37,655 | INFO     | model: linear, x: [1716212004.0, 1716212065.0, 1716212126.0, 1716212187.0, 1716212248.0, 1716212309.0, 1716212370.0, 1716212431.0, 1716212492.0, 1716212553.0, 1716
[2024-05-20 20:59:52] 2024-05-20 18:59:37,655 | INFO     | sum of square deviations: 10256266720.0
[2024-05-20 20:59:52] 2024-05-20 18:59:37,658 | INFO     | sum of deviations: -75713066837.00002
[2024-05-20 20:59:52] 2024-05-20 18:59:37,658 | INFO     | mean x: 1716221764.0
[2024-05-20 20:59:52] 2024-05-20 18:59:37,658 | INFO     | mean y: 2412694.445482866
[2024-05-20 20:59:52] 2024-05-20 18:59:37,658 | INFO     | -- intersect: 12671780279.383451
[2024-05-20 20:59:52] 2024-05-20 18:59:37,659 | INFO     | intersect: 12671780279.383451
[2024-05-20 20:59:52] 2024-05-20 18:59:37,659 | INFO     | chi2: 0.2467517257902874
[2024-05-20 20:59:52] 2024-05-20 18:59:37,659 | INFO     | current chi2=0.2467517257902874 (change=18.644562576245466 %)
[2024-05-20 20:59:52] 2024-05-20 18:59:37,659 | INFO     | left removable region: 30
[2024-05-20 20:59:52] 2024-05-20 18:59:37,660 | INFO     | model: linear, x: [1716212919.0, 1716212980.0, 1716213041.0, 1716213102.0, 1716213163.0, 1716213224.0, 1716213285.0, 1716213346.0, 1716213407.0, 1716213468.0, 1716
[2024-05-20 20:59:52] 2024-05-20 18:59:37,660 | INFO     | sum of square deviations: 8372156975.0
[2024-05-20 20:59:52] 2024-05-20 18:59:37,662 | INFO     | sum of deviations: -46980948005.5
[2024-05-20 20:59:52] 2024-05-20 18:59:37,662 | INFO     | mean x: 1716222038.5
[2024-05-20 20:59:52] 2024-05-20 18:59:37,662 | INFO     | mean y: 2403524.75
[2024-05-20 20:59:52] 2024-05-20 18:59:37,662 | INFO     | -- intersect: 9633104262.61591
[2024-05-20 20:59:52] 2024-05-20 18:59:37,663 | INFO     | intersect: 9633104262.61591
[2024-05-20 20:59:52] 2024-05-20 18:59:37,663 | INFO     | chi2: 0.20060443965519065
[2024-05-20 20:59:52] 2024-05-20 18:59:37,663 | INFO     | -- intersect: 9633104262.61591
[2024-05-20 20:59:52] 2024-05-20 18:59:37,663 | INFO     | current memory leak: -5.61 B/s (using 300 data points, chi2=0.20)
[2024-05-20 20:59:52] 2024-05-20 18:59:37,664 | INFO     | ..............................
[2024-05-20 20:59:52] 2024-05-20 18:59:37,664 | INFO     | . Timing measurements:
[2024-05-20 20:59:52] 2024-05-20 18:59:37,664 | INFO     | . get job = 0 s
[2024-05-20 20:59:52] 2024-05-20 18:59:37,664 | INFO     | . initial setup = 1 s
[2024-05-20 20:59:52] 2024-05-20 18:59:37,664 | INFO     | . payload setup = 4 s
[2024-05-20 20:59:52] 2024-05-20 18:59:37,664 | INFO     | . stage-in = 0 s
[2024-05-20 20:59:52] 2024-05-20 18:59:37,665 | INFO     | . payload execution = 20478 s
[2024-05-20 20:59:52] 2024-05-20 18:59:37,665 | INFO     | . stage-out = 1 s
[2024-05-20 20:59:52] 2024-05-20 18:59:37,665 | INFO     | . log creation = 0 s
[2024-05-20 20:59:52] 2024-05-20 18:59:37,665 | INFO     | ..............................
[2024-05-20 20:59:52] 2024-05-20 18:59:37,843 | INFO     | 
[2024-05-20 20:59:52] 2024-05-20 18:59:37,843 | INFO     | job summary report
[2024-05-20 20:59:52] 2024-05-20 18:59:37,843 | INFO     | --------------------------------------------------
[2024-05-20 20:59:52] 2024-05-20 18:59:37,844 | INFO     | PanDA job id: 6208281153
[2024-05-20 20:59:52] 2024-05-20 18:59:37,844 | INFO     | task id: 38920987
[2024-05-20 20:59:52] 2024-05-20 18:59:37,844 | INFO     | errors: (none)
[2024-05-20 20:59:52] 2024-05-20 18:59:37,844 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-20 20:59:52] 2024-05-20 18:59:37,844 | INFO     | pilot state: finished 
[2024-05-20 20:59:52] 2024-05-20 18:59:37,844 | INFO     | transexitcode: 0
[2024-05-20 20:59:52] 2024-05-20 18:59:37,844 | INFO     | exeerrorcode: 0
[2024-05-20 20:59:52] 2024-05-20 18:59:37,844 | INFO     | exeerrordiag: 
[2024-05-20 20:59:52] 2024-05-20 18:59:37,845 | INFO     | exitcode: 0
[2024-05-20 20:59:52] 2024-05-20 18:59:37,845 | INFO     | exitmsg: OK
[2024-05-20 20:59:52] 2024-05-20 18:59:37,845 | INFO     | cpuconsumptiontime: 78894 s
[2024-05-20 20:59:52] 2024-05-20 18:59:37,845 | INFO     | nevents: 400
[2024-05-20 20:59:52] 2024-05-20 18:59:37,845 | INFO     | neventsw: 0
[2024-05-20 20:59:52] 2024-05-20 18:59:37,845 | INFO     | pid: 2137772
[2024-05-20 20:59:52] 2024-05-20 18:59:37,845 | INFO     | pgrp: 2137772
[2024-05-20 20:59:52] 2024-05-20 18:59:37,845 | INFO     | corecount: 4
[2024-05-20 20:59:52] 2024-05-20 18:59:37,845 | INFO     | event service: False
[2024-05-20 20:59:52] 2024-05-20 18:59:37,846 | INFO     | sizes: {0: 2392088, 4: 2392294, 11: 2392322, 20486: 2425896, 20488: 2434878, 20491: 2434934, 20496: 2435232}
[2024-05-20 20:59:52] 2024-05-20 18:59:37,846 | INFO     | --------------------------------------------------
[2024-05-20 20:59:52] 2024-05-20 18:59:37,846 | INFO     | 
[2024-05-20 20:59:52] 2024-05-20 18:59:37,846 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2024-05-20 20:59:52] 2024-05-20 18:59:37,869 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-20 20:59:52] 2024-05-20 18:59:37,870 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-20 20:59:52] 2024-05-20 18:59:37,870 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-20 20:59:52] 2024-05-20 18:59:37,870 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-20 20:59:52] 2024-05-20 18:59:37,870 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-20 20:59:52] 2024-05-20 18:59:37,870 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-20 20:59:52] 2024-05-20 18:59:37,870 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-20 20:59:52] 2024-05-20 18:59:37,870 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-20 20:59:52] 2024-05-20 18:59:37,871 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-20 20:59:52] 2024-05-20 18:59:37,871 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-20 20:59:52] 2024-05-20 18:59:37,871 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-20 20:59:52] 2024-05-20 18:59:37,871 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-20 20:59:52] 2024-05-20 18:59:37,871 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-20 20:59:52] 2024-05-20 18:59:37,871 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-20 20:59:52] 2024-05-20 18:59:37,871 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-20 20:59:52] 2024-05-20 18:59:37,871 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-20 20:59:52] 2024-05-20 18:59:37,872 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-20 20:59:52] 2024-05-20 18:59:37,872 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-20 20:59:52] 2024-05-20 18:59:37,872 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-20 20:59:52] 2024-05-20 18:59:37,872 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-20 20:59:52] 2024-05-20 18:59:37,872 | INFO     | job 6208281153 has completed (purged errors)
[2024-05-20 20:59:52] 2024-05-20 18:59:37,872 | INFO     | overall cleanup function is called
[2024-05-20 20:59:52] 2024-05-20 18:59:38,880 | INFO     | --- collectZombieJob: --- 10, [2137772]
[2024-05-20 20:59:52] 2024-05-20 18:59:38,881 | INFO     | zombie collector waiting for pid 2137772
[2024-05-20 20:59:52] 2024-05-20 18:59:38,881 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-20 20:59:52] 2024-05-20 18:59:39,886 | INFO     | collected zombie processes
[2024-05-20 20:59:52] 2024-05-20 18:59:39,886 | INFO     | will now attempt to kill all subprocesses of pid=2137772
[2024-05-20 20:59:52] 2024-05-20 18:59:40,006 | INFO     | process IDs to be killed: [2137772] (in reverse order)
[2024-05-20 20:59:52] 2024-05-20 18:59:40,075 | WARNING  | found no corresponding commands to process id(s)
[2024-05-20 20:59:52] 2024-05-20 18:59:40,076 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-20 20:59:52] 2024-05-20 18:59:40,083 | INFO     | did not find any defunct processes belonging to 2137772
[2024-05-20 20:59:52] 2024-05-20 18:59:40,089 | INFO     | did not find any defunct processes belonging to 2137772
[2024-05-20 20:59:52] 2024-05-20 18:59:40,090 | INFO     | ready for new job
[2024-05-20 20:59:52] 2024-05-20 18:59:40,090 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-20 20:59:52] 2024-05-20 18:59:40,093 | INFO     | *************************************
[2024-05-20 20:59:52] 2024-05-20 18:59:40,093 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-20 20:59:52] 2024-05-20 18:59:40,093 | INFO     | *************************************
[2024-05-20 20:59:52] 2024-05-20 18:59:40,093 | INFO     | 
[2024-05-20 20:59:52] 2024-05-20 18:59:40,096 | INFO     | architecture information:
[2024-05-20 20:59:52] 2024-05-20 18:59:40,096 | INFO     | executing command: cat /etc/os-release
[2024-05-20 20:59:52] 2024-05-20 18:59:40,110 | INFO     | cat /etc/os-release:
[2024-05-20 20:59:52] NAME="CentOS Linux"
[2024-05-20 20:59:52] VERSION="7 (Core)"
[2024-05-20 20:59:52] ID="centos"
[2024-05-20 20:59:52] ID_LIKE="rhel fedora"
[2024-05-20 20:59:52] VERSION_ID="7"
[2024-05-20 20:59:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-20 20:59:52] ANSI_COLOR="0;31"
[2024-05-20 20:59:52] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-20 20:59:52] HOME_URL="https://www.centos.org/"
[2024-05-20 20:59:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-20 20:59:52] 
[2024-05-20 20:59:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-20 20:59:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-20 20:59:52] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-20 20:59:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-20 20:59:52] 
[2024-05-20 20:59:52] 2024-05-20 18:59:40,110 | INFO     | *************************************
[2024-05-20 20:59:52] 2024-05-20 18:59:40,614 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2024-05-20 20:59:52] 2024-05-20 18:59:40,633 | INFO     | sufficient remaining disk space (1626335084544 B)
[2024-05-20 20:59:52] 2024-05-20 18:59:40,634 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-20 20:59:52] 2024-05-20 18:59:40,634 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-20 20:59:52] 2024-05-20 18:59:40,634 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-20 20:59:52] 2024-05-20 18:59:40,635 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-20 20:59:52] 2024-05-20 18:59:40,635 | INFO     | found 0 job(s) in 20 queues
[2024-05-20 20:59:52] 2024-05-20 18:59:40,635 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-20 20:59:52] 2024-05-20 18:59:40,635 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-20 20:59:52] 2024-05-20 18:59:40,711 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-20 20:59:52] 2024-05-20 18:59:40,711 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-20 20:59:52] 2024-05-20 18:59:40,711 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-20 20:59:52] 2024-05-20 18:59:40,711 | INFO     | will abort loop
[2024-05-20 20:59:52] 2024-05-20 18:59:41,266 | INFO     | all data control threads have been joined
[2024-05-20 20:59:52] 2024-05-20 18:59:41,614 | INFO     | all job control threads have been joined
[2024-05-20 20:59:52] 2024-05-20 18:59:41,639 | INFO     | [job] retrieve thread has finished
[2024-05-20 20:59:52] 2024-05-20 18:59:41,717 | INFO     | [job] job monitor thread has finished
[2024-05-20 20:59:52] 2024-05-20 18:59:41,906 | INFO     | [job] validate thread has finished
[2024-05-20 20:59:52] 2024-05-20 18:59:42,005 | INFO     | [payload] failed_post thread has finished
[2024-05-20 20:59:52] 2024-05-20 18:59:42,068 | INFO     | all payload control threads have been joined
[2024-05-20 20:59:52] 2024-05-20 18:59:42,143 | INFO     | [payload] execute_payloads thread has finished
[2024-05-20 20:59:52] 2024-05-20 18:59:42,170 | INFO     | [job] create_data_payload thread has finished
[2024-05-20 20:59:52] 2024-05-20 18:59:42,272 | INFO     | [data] control thread has finished
[2024-05-20 20:59:52] 2024-05-20 18:59:42,407 | INFO     | [payload] validate_pre thread has finished
[2024-05-20 20:59:52] 2024-05-20 18:59:42,619 | INFO     | [job] control thread has finished
[2024-05-20 20:59:52] 2024-05-20 18:59:42,640 | INFO     | [data] copytool_out thread has finished
[2024-05-20 20:59:52] 2024-05-20 18:59:42,758 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-20 20:59:52] 2024-05-20 18:59:42,765 | INFO     | [data] copytool_in thread has finished
[2024-05-20 20:59:52] 2024-05-20 18:59:42,993 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-20 20:59:52] 2024-05-20 18:59:43,065 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-20 20:59:52] 2024-05-20 18:59:43,074 | INFO     | [payload] control thread has finished
[2024-05-20 20:59:52] 2024-05-20 18:59:43,137 | INFO     | [payload] validate_post thread has finished
[2024-05-20 20:59:52] 2024-05-20 18:59:43,763 | INFO     | [job] queue monitor thread has finished
[2024-05-20 20:59:52] 2024-05-20 18:59:46,999 | INFO     | [data] queue_monitor thread has finished
[2024-05-20 20:59:52] 2024-05-20 18:59:47,068 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47091050755136)>', '<ExcThread(monitor, started 47091224106752)>']
[2024-05-20 20:59:52] 2024-05-20 18:59:47,671 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-20 20:59:52] 2024-05-20 18:59:47,671 | INFO     | [monitor] control thread has ended
[2024-05-20 20:59:52] 2024-05-20 18:59:52,094 | INFO     | all workflow threads have been joined
[2024-05-20 20:59:52] 2024-05-20 18:59:52,094 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-20 20:59:52] 2024-05-20 18:59:52,095 | INFO     | traces error code: 0
[2024-05-20 20:59:52] 2024-05-20 18:59:52,095 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-20 20:59:52] 2024-05-20 18:59:52,179 [wrapper] ==== pilot stdout END ====
[2024-05-20 20:59:52] 2024-05-20 18:59:52,182 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-20 20:59:52] 2024-05-20 18:59:52,185 [wrapper] pilotpid: 2130837
[2024-05-20 20:59:52] 2024-05-20 18:59:52,188 [wrapper] Pilot exit status: 0
[2024-05-20 20:59:52] 2024-05-20 18:59:52,198 [wrapper] pandaids: 6208281153
[2024-05-20 20:59:52] 2024-05-20 18:59:52,256 [wrapper] cleanup: SIGTERM to supervisor_pilot 2512490 2130838
[2024-05-20 20:59:52] 2024-05-20 18:59:52,260 [wrapper] Test setup, not cleaning
[2024-05-20 20:59:52] 2024-05-20 18:59:52,263 [wrapper] ==== wrapper stdout END ====
[2024-05-20 20:59:52] 2024-05-20 18:59:52,266 [wrapper] ==== wrapper stderr END ====
[2024-05-20 20:59:52] 2024-05-20 18:59:52,272 [wrapper] apfmon messages muted
[2024-05-20 20:59:52]  *** Error codes and diagnostics ***
[2024-05-20 20:59:52]     "exeErrorCode": 0,
[2024-05-20 20:59:52]     "exeErrorDiag": "",
[2024-05-20 20:59:52]     "pilotErrorCode": 0,
[2024-05-20 20:59:52]     "pilotErrorDiag": "",
[2024-05-20 20:59:52]  *** Listing of results directory ***
[2024-05-20 20:59:52] total 952860
[2024-05-20 20:59:52] -rw-r--r-- 1 boinc boinc    467845 May 17 21:35 pilot3.tar.gz
[2024-05-20 20:59:52] -rw-r--r-- 1 boinc boinc      5633 May 17 21:36 queuedata.json
[2024-05-20 20:59:52] -rwx------ 1 boinc boinc     32251 May 17 21:37 runpilot2-wrapper.sh
[2024-05-20 20:59:52] -rw-r--r-- 1 boinc boinc       100 May 20 15:17 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-20 20:59:52] -rwxr-xr-x 1 boinc boinc      7986 May 20 15:17 run_atlas
[2024-05-20 20:59:52] -rw-r--r-- 1 boinc boinc       105 May 20 15:17 job.xml
[2024-05-20 20:59:52] -rw-r--r-- 2 boinc boinc 635777182 May 20 15:17 EVNT.38776170._000175.pool.root.1
[2024-05-20 20:59:52] -rw-r--r-- 2 boinc boinc     17537 May 20 15:17 start_atlas.sh
[2024-05-20 20:59:52] drwxrwx--x 2 boinc boinc      4096 May 20 15:17 shared
[2024-05-20 20:59:52] -rw-r--r-- 2 boinc boinc    480000 May 20 15:17 input.tar.gz
[2024-05-20 20:59:52] -rw-r--r-- 1 boinc boinc      6457 May 20 15:17 init_data.xml
[2024-05-20 20:59:52] -rw-r--r-- 1 boinc boinc         0 May 20 15:17 boinc_lockfile
[2024-05-20 20:59:52] -rw-r--r-- 1 boinc boinc      2616 May 20 15:17 pandaJob.out
[2024-05-20 20:59:52] -rw------- 1 boinc boinc       424 May 20 15:17 setup.sh.local
[2024-05-20 20:59:52] -rw------- 1 boinc boinc   1013965 May 20 15:17 agis_schedconf.cvmfs.json
[2024-05-20 20:59:52] -rw------- 1 boinc boinc   1324701 May 20 15:17 cric_ddmendpoints.json
[2024-05-20 20:59:52] drwx------ 4 boinc boinc      4096 May 20 15:17 pilot3
[2024-05-20 20:59:52] -rw------- 1 boinc boinc 330945573 May 20 20:58 HITS.38920987._004591.pool.root.1
[2024-05-20 20:59:52] -rw-r--r-- 1 boinc boinc       531 May 20 20:59 boinc_task_state.xml
[2024-05-20 20:59:52] -rw------- 1 boinc boinc      1053 May 20 20:59 memory_monitor_summary.json
[2024-05-20 20:59:52] -rw------- 1 boinc boinc         0 May 20 20:59 agis_ddmendpoints.agis.ALL.json
[2024-05-20 20:59:52] -rw------- 1 boinc boinc    437867 May 20 20:59 log.38920987._004591.job.log.tgz.1
[2024-05-20 20:59:52] -rw-r--r-- 1 boinc boinc      8192 May 20 20:59 boinc_mmap_file
[2024-05-20 20:59:52] -rw-r--r-- 1 boinc boinc        28 May 20 20:59 wrapper_checkpoint.txt
[2024-05-20 20:59:52] -rw------- 1 boinc boinc      7772 May 20 20:59 heartbeat.json
[2024-05-20 20:59:52] -rw------- 1 boinc boinc        95 May 20 20:59 pilot_heartbeat.json
[2024-05-20 20:59:52] -rw------- 1 boinc boinc      4531 May 20 20:59 pilotlog.txt
[2024-05-20 20:59:52] -rw------- 1 boinc boinc   2298694 May 20 20:59 log.38920987._004591.job.log.1
[2024-05-20 20:59:52] -rw------- 1 boinc boinc       357 May 20 20:59 output.list
[2024-05-20 20:59:52] -rw-r--r-- 1 boinc boinc       620 May 20 20:59 runtime_log
[2024-05-20 20:59:52] -rw------- 1 boinc boinc   2754560 May 20 20:59 result.tar.gz
[2024-05-20 20:59:52] -rw-r--r-- 1 boinc boinc     11410 May 20 20:59 runtime_log.err
[2024-05-20 20:59:52] -rw------- 1 boinc boinc       660 May 20 20:59 bErKDmtZIS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmbTRKDmgkyBVn.diag
[2024-05-20 20:59:52] -rw-r--r-- 1 boinc boinc     21361 May 20 20:59 stderr.txt
[2024-05-20 20:59:52] HITS file was successfully produced:
[2024-05-20 20:59:52] -rw------- 1 boinc boinc 330945573 May 20 20:58 shared/HITS.pool.root.1
[2024-05-20 20:59:52]  *** Contents of shared directory: ***
[2024-05-20 20:59:52] total 947264
[2024-05-20 20:59:52] -rw-r--r-- 2 boinc boinc 635777182 May 20 15:17 ATLAS.root_0
[2024-05-20 20:59:52] -rw-r--r-- 2 boinc boinc     17537 May 20 15:17 start_atlas.sh
[2024-05-20 20:59:52] -rw-r--r-- 2 boinc boinc    480000 May 20 15:17 input.tar.gz
[2024-05-20 20:59:52] -rw------- 1 boinc boinc 330945573 May 20 20:58 HITS.pool.root.1
[2024-05-20 20:59:52] -rw------- 1 boinc boinc   2754560 May 20 20:59 result.tar.gz
20:59:54 (2126630): run_atlas exited; CPU time 78335.513698
20:59:54 (2126630): called boinc_finish(0)

</stderr_txt>
]]>

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