Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:31:15 (3621798): wrapper (7.7.26015): starting
02:31:15 (3621798): wrapper: running run_atlas (--nthreads 4)
[2024-05-20 02:31:15] Arguments: --nthreads 4
[2024-05-20 02:31:15] Threads: 4
[2024-05-20 02:31:15] Checking for CVMFS
[2024-05-20 02:31:15] No cvmfs_config command found, will try listing directly
[2024-05-20 02:31:15] CVMFS is ok
[2024-05-20 02:31:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-20 02:31:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-20 02:31:15] Further information can be found at the LHC@home message board.
[2024-05-20 02:31:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-20 02:31:15] Checking for apptainer binary...
[2024-05-20 02:31:15] which: no apptainer in ((null))
[2024-05-20 02:31:15] apptainer is not installed, using version from CVMFS
[2024-05-20 02:31:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-20 02:31:16] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2024-05-20 02:31:16] apptainer works
[2024-05-20 02:31:16] Set ATHENA_PROC_NUMBER=4
[2024-05-20 02:31:16] Set ATHENA_CORE_NUMBER=4
[2024-05-20 02:31:16] Starting ATLAS job with PandaID=6208281034
[2024-05-20 02:31:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-20 07:22:05]  *** The last 200 lines of the pilot log: ***
[2024-05-20 07:22:05] 2024-05-20 05:21:42,576 | INFO     | model: linear, x: [1716165727.0, 1716165788.0, 1716165849.0, 1716165910.0, 1716165971.0, 1716166032.0, 1716166093.0, 1716166154.0, 1716166215.0, 1716166276.0, 1716
[2024-05-20 07:22:05] 2024-05-20 05:21:42,577 | INFO     | sum of square deviations: 6448679050.0
[2024-05-20 07:22:05] 2024-05-20 05:21:42,578 | INFO     | sum of deviations: -14784532912.000002
[2024-05-20 07:22:05] 2024-05-20 05:21:42,578 | INFO     | mean x: 1716174084.0
[2024-05-20 07:22:05] 2024-05-20 05:21:42,578 | INFO     | mean y: 2380494.4909090907
[2024-05-20 07:22:05] 2024-05-20 05:21:42,579 | INFO     | -- intersect: 3936958728.4037066
[2024-05-20 07:22:05] 2024-05-20 05:21:42,579 | INFO     | intersect: 3936958728.4037066
[2024-05-20 07:22:05] 2024-05-20 05:21:42,579 | INFO     | chi2: 0.06723669793199188
[2024-05-20 07:22:05] 2024-05-20 05:21:42,579 | INFO     | current chi2=0.06723669793199188 (change=94.59418092350072 %)
[2024-05-20 07:22:05] 2024-05-20 05:21:42,579 | INFO     | model: linear, x: [1716166032.0, 1716166093.0, 1716166154.0, 1716166215.0, 1716166276.0, 1716166337.0, 1716166398.0, 1716166459.0, 1716166520.0, 1716166581.0, 1716
[2024-05-20 07:22:05] 2024-05-20 05:21:42,579 | INFO     | sum of square deviations: 6103286527.5
[2024-05-20 07:22:05] 2024-05-20 05:21:42,581 | INFO     | sum of deviations: -15012871253.500002
[2024-05-20 07:22:05] 2024-05-20 05:21:42,581 | INFO     | mean x: 1716174236.5
[2024-05-20 07:22:05] 2024-05-20 05:21:42,581 | INFO     | mean y: 2380568.211111111
[2024-05-20 07:22:05] 2024-05-20 05:21:42,581 | INFO     | -- intersect: 4223827938.4203196
[2024-05-20 07:22:05] 2024-05-20 05:21:42,581 | INFO     | intersect: 4223827938.4203196
[2024-05-20 07:22:05] 2024-05-20 05:21:42,582 | INFO     | chi2: 0.04499400370792409
[2024-05-20 07:22:05] 2024-05-20 05:21:42,582 | INFO     | current chi2=0.04499400370792409 (change=33.081181718004174 %)
[2024-05-20 07:22:05] 2024-05-20 05:21:42,582 | INFO     | model: linear, x: [1716166337.0, 1716166398.0, 1716166459.0, 1716166520.0, 1716166581.0, 1716166642.0, 1716166703.0, 1716166764.0, 1716166825.0, 1716166886.0, 1716
[2024-05-20 07:22:05] 2024-05-20 05:21:42,582 | INFO     | sum of square deviations: 5770452380.0
[2024-05-20 07:22:05] 2024-05-20 05:21:42,584 | INFO     | sum of deviations: -8097921836.999999
[2024-05-20 07:22:05] 2024-05-20 05:21:42,584 | INFO     | mean x: 1716174389.0
[2024-05-20 07:22:05] 2024-05-20 05:21:42,584 | INFO     | mean y: 2377397.675471698
[2024-05-20 07:22:05] 2024-05-20 05:21:42,584 | INFO     | -- intersect: 2410758083.555637
[2024-05-20 07:22:05] 2024-05-20 05:21:42,584 | INFO     | intersect: 2410758083.555637
[2024-05-20 07:22:05] 2024-05-20 05:21:42,585 | INFO     | chi2: 0.024522494171681473
[2024-05-20 07:22:05] 2024-05-20 05:21:42,585 | INFO     | current chi2=0.024522494171681473 (change=45.49830610570291 %)
[2024-05-20 07:22:05] 2024-05-20 05:21:42,585 | INFO     | model: linear, x: [1716166642.0, 1716166703.0, 1716166764.0, 1716166825.0, 1716166886.0, 1716166947.0, 1716167008.0, 1716167069.0, 1716167130.0, 1716167191.0, 1716
[2024-05-20 07:22:05] 2024-05-20 05:21:42,585 | INFO     | sum of square deviations: 5449944045.0
[2024-05-20 07:22:05] 2024-05-20 05:21:42,587 | INFO     | sum of deviations: -2825397328.999999
[2024-05-20 07:22:05] 2024-05-20 05:21:42,587 | INFO     | mean x: 1716174541.5
[2024-05-20 07:22:05] 2024-05-20 05:21:42,587 | INFO     | mean y: 2374898.876923077
[2024-05-20 07:22:05] 2024-05-20 05:21:42,587 | INFO     | -- intersect: 892085862.0748761
[2024-05-20 07:22:05] 2024-05-20 05:21:42,587 | INFO     | intersect: 892085862.0748761
[2024-05-20 07:22:05] 2024-05-20 05:21:42,587 | INFO     | chi2: 0.008872498160977663
[2024-05-20 07:22:05] 2024-05-20 05:21:42,587 | INFO     | current chi2=0.008872498160977663 (change=63.818940688245306 %)
[2024-05-20 07:22:05] 2024-05-20 05:21:42,588 | INFO     | model: linear, x: [1716166947.0, 1716167008.0, 1716167069.0, 1716167130.0, 1716167191.0, 1716167252.0, 1716167313.0, 1716167374.0, 1716167435.0, 1716167496.0, 1716
[2024-05-20 07:22:05] 2024-05-20 05:21:42,588 | INFO     | sum of square deviations: 5141528960.0
[2024-05-20 07:22:05] 2024-05-20 05:21:42,589 | INFO     | sum of deviations: -774237376.0
[2024-05-20 07:22:05] 2024-05-20 05:21:42,589 | INFO     | mean x: 1716174694.0
[2024-05-20 07:22:05] 2024-05-20 05:21:42,589 | INFO     | mean y: 2373883.9411764704
[2024-05-20 07:22:05] 2024-05-20 05:21:42,589 | INFO     | -- intersect: 260804129.53103364
[2024-05-20 07:22:05] 2024-05-20 05:21:42,589 | INFO     | intersect: 260804129.53103364
[2024-05-20 07:22:05] 2024-05-20 05:21:42,590 | INFO     | chi2: 0.0067041520085738
[2024-05-20 07:22:05] 2024-05-20 05:21:42,590 | INFO     | current chi2=0.0067041520085738 (change=24.438958600639847 %)
[2024-05-20 07:22:05] 2024-05-20 05:21:42,590 | INFO     | left removable region: 60
[2024-05-20 07:22:05] 2024-05-20 05:21:42,590 | INFO     | model: linear, x: [1716168777.0, 1716168838.0, 1716168899.0, 1716168960.0, 1716169021.0, 1716169082.0, 1716169143.0, 1716169204.0, 1716169265.0, 1716169326.0, 1716
[2024-05-20 07:22:05] 2024-05-20 05:21:42,590 | INFO     | sum of square deviations: 3256879670.0
[2024-05-20 07:22:05] 2024-05-20 05:21:42,591 | INFO     | sum of deviations: 2634861755.0000005
[2024-05-20 07:22:05] 2024-05-20 05:21:42,591 | INFO     | mean x: 1716175426.0
[2024-05-20 07:22:05] 2024-05-20 05:21:42,591 | INFO     | mean y: 2371957.292237443
[2024-05-20 07:22:05] 2024-05-20 05:21:42,591 | INFO     | -- intersect: -1386038255.246635
[2024-05-20 07:22:05] 2024-05-20 05:21:42,591 | INFO     | intersect: -1386038255.246635
[2024-05-20 07:22:05] 2024-05-20 05:21:42,591 | INFO     | chi2: 4.8234053511912863e-05
[2024-05-20 07:22:05] 2024-05-20 05:21:42,591 | INFO     | -- intersect: -1386038255.246635
[2024-05-20 07:22:05] 2024-05-20 05:21:42,591 | INFO     | current memory leak: 0.81 B/s (using 219 data points, chi2=0.00)
[2024-05-20 07:22:05] 2024-05-20 05:21:42,591 | INFO     | ..............................
[2024-05-20 07:22:05] 2024-05-20 05:21:42,592 | INFO     | . Timing measurements:
[2024-05-20 07:22:05] 2024-05-20 05:21:42,592 | INFO     | . get job = 0 s
[2024-05-20 07:22:05] 2024-05-20 05:21:42,592 | INFO     | . initial setup = 1 s
[2024-05-20 07:22:05] 2024-05-20 05:21:42,592 | INFO     | . payload setup = 7 s
[2024-05-20 07:22:05] 2024-05-20 05:21:42,592 | INFO     | . stage-in = 0 s
[2024-05-20 07:22:05] 2024-05-20 05:21:42,592 | INFO     | . payload execution = 17379 s
[2024-05-20 07:22:05] 2024-05-20 05:21:42,592 | INFO     | . stage-out = 0 s
[2024-05-20 07:22:05] 2024-05-20 05:21:42,592 | INFO     | . log creation = 0 s
[2024-05-20 07:22:05] 2024-05-20 05:21:42,592 | INFO     | ..............................
[2024-05-20 07:22:05] 2024-05-20 05:21:42,646 | INFO     | 
[2024-05-20 07:22:05] 2024-05-20 05:21:42,646 | INFO     | job summary report
[2024-05-20 07:22:05] 2024-05-20 05:21:42,646 | INFO     | --------------------------------------------------
[2024-05-20 07:22:05] 2024-05-20 05:21:42,646 | INFO     | PanDA job id: 6208281034
[2024-05-20 07:22:05] 2024-05-20 05:21:42,646 | INFO     | task id: 38920987
[2024-05-20 07:22:05] 2024-05-20 05:21:42,646 | INFO     | errors: (none)
[2024-05-20 07:22:05] 2024-05-20 05:21:42,646 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-20 07:22:05] 2024-05-20 05:21:42,646 | INFO     | pilot state: finished 
[2024-05-20 07:22:05] 2024-05-20 05:21:42,646 | INFO     | transexitcode: 0
[2024-05-20 07:22:05] 2024-05-20 05:21:42,646 | INFO     | exeerrorcode: 0
[2024-05-20 07:22:05] 2024-05-20 05:21:42,646 | INFO     | exeerrordiag: 
[2024-05-20 07:22:05] 2024-05-20 05:21:42,646 | INFO     | exitcode: 0
[2024-05-20 07:22:05] 2024-05-20 05:21:42,646 | INFO     | exitmsg: OK
[2024-05-20 07:22:05] 2024-05-20 05:21:42,646 | INFO     | cpuconsumptiontime: 66475 s
[2024-05-20 07:22:05] 2024-05-20 05:21:42,646 | INFO     | nevents: 400
[2024-05-20 07:22:05] 2024-05-20 05:21:42,646 | INFO     | neventsw: 0
[2024-05-20 07:22:05] 2024-05-20 05:21:42,646 | INFO     | pid: 3634747
[2024-05-20 07:22:05] 2024-05-20 05:21:42,646 | INFO     | pgrp: 3634747
[2024-05-20 07:22:05] 2024-05-20 05:21:42,646 | INFO     | corecount: 4
[2024-05-20 07:22:05] 2024-05-20 05:21:42,646 | INFO     | event service: False
[2024-05-20 07:22:05] 2024-05-20 05:21:42,646 | INFO     | sizes: {0: 2392089, 5: 2392295, 11: 2392351, 17390: 2424437, 17391: 2433421, 17392: 2433477, 17398: 2433775}
[2024-05-20 07:22:05] 2024-05-20 05:21:42,646 | INFO     | --------------------------------------------------
[2024-05-20 07:22:05] 2024-05-20 05:21:42,646 | INFO     | 
[2024-05-20 07:22:05] 2024-05-20 05:21:42,647 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/0
[2024-05-20 07:22:05] 2024-05-20 05:21:42,747 | WARNING  | process 3634747 is no longer using CPU - aborting
[2024-05-20 07:22:05] 2024-05-20 05:21:42,747 | INFO     | aborting job monitoring since job object (job id=6208281034) has expired
[2024-05-20 07:22:05] 2024-05-20 05:21:42,767 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-20 07:22:05] 2024-05-20 05:21:42,768 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-20 07:22:05] 2024-05-20 05:21:42,768 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-20 07:22:05] 2024-05-20 05:21:42,768 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-20 07:22:05] 2024-05-20 05:21:42,768 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-20 07:22:05] 2024-05-20 05:21:42,768 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-20 07:22:05] 2024-05-20 05:21:42,768 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-20 07:22:05] 2024-05-20 05:21:42,768 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-20 07:22:05] 2024-05-20 05:21:42,768 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-20 07:22:05] 2024-05-20 05:21:42,768 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-20 07:22:05] 2024-05-20 05:21:42,768 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-20 07:22:05] 2024-05-20 05:21:42,768 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-20 07:22:05] 2024-05-20 05:21:42,768 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-20 07:22:05] 2024-05-20 05:21:42,768 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-20 07:22:05] 2024-05-20 05:21:42,768 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-20 07:22:05] 2024-05-20 05:21:42,768 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-20 07:22:05] 2024-05-20 05:21:42,768 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-20 07:22:05] 2024-05-20 05:21:42,768 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-20 07:22:05] 2024-05-20 05:21:42,768 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-20 07:22:05] 2024-05-20 05:21:42,768 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-20 07:22:05] 2024-05-20 05:21:42,769 | INFO     | job 6208281034 has completed (purged errors)
[2024-05-20 07:22:05] 2024-05-20 05:21:42,769 | INFO     | overall cleanup function is called
[2024-05-20 07:22:05] 2024-05-20 05:21:43,775 | INFO     | --- collectZombieJob: --- 10, [3634747]
[2024-05-20 07:22:05] 2024-05-20 05:21:43,775 | INFO     | zombie collector waiting for pid 3634747
[2024-05-20 07:22:05] 2024-05-20 05:21:43,775 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-20 07:22:05] 2024-05-20 05:21:44,776 | INFO     | collected zombie processes
[2024-05-20 07:22:05] 2024-05-20 05:21:44,776 | INFO     | will now attempt to kill all subprocesses of pid=3634747
[2024-05-20 07:22:05] 2024-05-20 05:21:44,965 | INFO     | process IDs to be killed: [3634747] (in reverse order)
[2024-05-20 07:22:05] 2024-05-20 05:21:45,103 | WARNING  | found no corresponding commands to process id(s)
[2024-05-20 07:22:05] 2024-05-20 05:21:45,103 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-20 07:22:05] 2024-05-20 05:21:45,116 | INFO     | did not find any defunct processes belonging to 3634747
[2024-05-20 07:22:05] 2024-05-20 05:21:45,125 | INFO     | did not find any defunct processes belonging to 3634747
[2024-05-20 07:22:05] 2024-05-20 05:21:45,125 | INFO     | ready for new job
[2024-05-20 07:22:05] 2024-05-20 05:21:45,125 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-20 07:22:05] 2024-05-20 05:21:45,127 | INFO     | *************************************
[2024-05-20 07:22:05] 2024-05-20 05:21:45,127 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-20 07:22:05] 2024-05-20 05:21:45,127 | INFO     | *************************************
[2024-05-20 07:22:05] 2024-05-20 05:21:45,127 | INFO     | 
[2024-05-20 07:22:05] 2024-05-20 05:21:45,131 | INFO     | architecture information:
[2024-05-20 07:22:05] 2024-05-20 05:21:45,132 | INFO     | executing command: cat /etc/os-release
[2024-05-20 07:22:05] 2024-05-20 05:21:45,150 | INFO     | cat /etc/os-release:
[2024-05-20 07:22:05] NAME="CentOS Linux"
[2024-05-20 07:22:05] VERSION="7 (Core)"
[2024-05-20 07:22:05] ID="centos"
[2024-05-20 07:22:05] ID_LIKE="rhel fedora"
[2024-05-20 07:22:05] VERSION_ID="7"
[2024-05-20 07:22:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-20 07:22:05] ANSI_COLOR="0;31"
[2024-05-20 07:22:05] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-20 07:22:05] HOME_URL="https://www.centos.org/"
[2024-05-20 07:22:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-20 07:22:05] 
[2024-05-20 07:22:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-20 07:22:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-20 07:22:05] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-20 07:22:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-20 07:22:05] 
[2024-05-20 07:22:05] 2024-05-20 05:21:45,150 | INFO     | *************************************
[2024-05-20 07:22:05] 2024-05-20 05:21:45,652 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/0
[2024-05-20 07:22:05] 2024-05-20 05:21:45,673 | INFO     | sufficient remaining disk space (3016143929344 B)
[2024-05-20 07:22:05] 2024-05-20 05:21:45,673 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-20 07:22:05] 2024-05-20 05:21:45,674 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-20 07:22:05] 2024-05-20 05:21:45,674 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-20 07:22:05] 2024-05-20 05:21:45,674 | INFO     | found 0 job(s) in 20 queues
[2024-05-20 07:22:05] 2024-05-20 05:21:45,674 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-20 07:22:05] 2024-05-20 05:21:45,674 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-20 07:22:05] 2024-05-20 05:21:46,229 | INFO     | all data control threads have been joined
[2024-05-20 07:22:05] 2024-05-20 05:21:46,256 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-20 07:22:05] 2024-05-20 05:21:46,256 | INFO     | aborting loop
[2024-05-20 07:22:05] 2024-05-20 05:21:46,678 | INFO     | [job] retrieve thread has finished
[2024-05-20 07:22:05] 2024-05-20 05:21:46,760 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-20 07:22:05] 2024-05-20 05:21:46,773 | INFO     | [payload] execute_payloads thread has finished
[2024-05-20 07:22:05] 2024-05-20 05:21:46,788 | INFO     | all payload control threads have been joined
[2024-05-20 07:22:05] 2024-05-20 05:21:46,807 | INFO     | [job] create_data_payload thread has finished
[2024-05-20 07:22:05] 2024-05-20 05:21:46,933 | INFO     | all job control threads have been joined
[2024-05-20 07:22:05] 2024-05-20 05:21:47,233 | INFO     | [data] control thread has finished
[2024-05-20 07:22:05] 2024-05-20 05:21:47,257 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-20 07:22:05] 2024-05-20 05:21:47,261 | INFO     | [job] job monitor thread has finished
[2024-05-20 07:22:05] 2024-05-20 05:21:47,581 | INFO     | [payload] validate_post thread has finished
[2024-05-20 07:22:05] 2024-05-20 05:21:47,621 | INFO     | [data] copytool_in thread has finished
[2024-05-20 07:22:05] 2024-05-20 05:21:47,653 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-20 07:22:05] 2024-05-20 05:21:47,676 | INFO     | [payload] failed_post thread has finished
[2024-05-20 07:22:05] 2024-05-20 05:21:47,760 | INFO     | [payload] validate_pre thread has finished
[2024-05-20 07:22:05] 2024-05-20 05:21:47,791 | INFO     | [payload] control thread has finished
[2024-05-20 07:22:05] 2024-05-20 05:21:47,939 | INFO     | [job] control thread has finished
[2024-05-20 07:22:05] 2024-05-20 05:21:47,992 | INFO     | [job] validate thread has finished
[2024-05-20 07:22:05] 2024-05-20 05:21:48,658 | INFO     | [job] queue monitor thread has finished
[2024-05-20 07:22:05] 2024-05-20 05:21:48,765 | INFO     | [data] copytool_out thread has finished
[2024-05-20 07:22:05] 2024-05-20 05:21:51,263 | INFO     | [data] queue_monitor thread has finished
[2024-05-20 07:22:05] 2024-05-20 05:21:56,646 | INFO     | job.realtimelogging is not enabled
[2024-05-20 07:22:05] 2024-05-20 05:21:57,652 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-20 07:22:05] 2024-05-20 05:21:59,445 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47117720618048)>', '<ExcThread(monitor, started 47117894231808)>']
[2024-05-20 07:22:05] 2024-05-20 05:21:59,736 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-20 07:22:05] 2024-05-20 05:21:59,736 | INFO     | [monitor] control thread has ended
[2024-05-20 07:22:05] 2024-05-20 05:22:04,470 | INFO     | all workflow threads have been joined
[2024-05-20 07:22:05] 2024-05-20 05:22:04,470 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-20 07:22:05] 2024-05-20 05:22:04,471 | INFO     | traces error code: 0
[2024-05-20 07:22:05] 2024-05-20 05:22:04,471 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-20 07:22:05] 2024-05-20 05:22:04,560 [wrapper] ==== pilot stdout END ====
[2024-05-20 07:22:05] 2024-05-20 05:22:04,562 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-20 07:22:05] 2024-05-20 05:22:04,565 [wrapper] pilotpid: 3626970
[2024-05-20 07:22:05] 2024-05-20 05:22:04,567 [wrapper] Pilot exit status: 0
[2024-05-20 07:22:05] 2024-05-20 05:22:04,576 [wrapper] pandaids: 6208281034
[2024-05-20 07:22:05] 2024-05-20 05:22:04,657 [wrapper] cleanup: SIGTERM to supervisor_pilot 1495014 3626971
[2024-05-20 07:22:05] 2024-05-20 05:22:04,659 [wrapper] Test setup, not cleaning
[2024-05-20 07:22:05] 2024-05-20 05:22:04,662 [wrapper] ==== wrapper stdout END ====
[2024-05-20 07:22:05] 2024-05-20 05:22:04,664 [wrapper] ==== wrapper stderr END ====
[2024-05-20 07:22:05] 2024-05-20 05:22:04,668 [wrapper] apfmon messages muted
[2024-05-20 07:22:05]  *** Error codes and diagnostics ***
[2024-05-20 07:22:05]     "exeErrorCode": 0,
[2024-05-20 07:22:05]     "exeErrorDiag": "",
[2024-05-20 07:22:05]     "pilotErrorCode": 0,
[2024-05-20 07:22:05]     "pilotErrorDiag": "",
[2024-05-20 07:22:05]  *** Listing of results directory ***
[2024-05-20 07:22:05] total 959340
[2024-05-20 07:22:05] -rw-r--r-- 1 boinc boinc    467845 May 17 20:47 pilot3.tar.gz
[2024-05-20 07:22:05] -rwx------ 1 boinc boinc     32251 May 17 21:25 runpilot2-wrapper.sh
[2024-05-20 07:22:05] -rw-r--r-- 1 boinc boinc      5633 May 17 21:25 queuedata.json
[2024-05-20 07:22:05] -rw-r--r-- 1 boinc boinc       100 May 20 02:31 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-20 07:22:05] -rwxr-xr-x 1 boinc boinc      7986 May 20 02:31 run_atlas
[2024-05-20 07:22:05] -rw-r--r-- 1 boinc boinc       105 May 20 02:31 job.xml
[2024-05-20 07:22:05] -rw-r--r-- 1 boinc boinc      6646 May 20 02:31 init_data.xml
[2024-05-20 07:22:05] -rw-r--r-- 2 boinc boinc 638967816 May 20 02:31 EVNT.38776170._000171.pool.root.1
[2024-05-20 07:22:05] -rw-r--r-- 2 boinc boinc     17537 May 20 02:31 start_atlas.sh
[2024-05-20 07:22:05] drwxrwx--x 2 boinc boinc      4096 May 20 02:31 shared
[2024-05-20 07:22:05] -rw-r--r-- 2 boinc boinc    480002 May 20 02:31 input.tar.gz
[2024-05-20 07:22:05] -rw-r--r-- 1 boinc boinc         0 May 20 02:31 boinc_lockfile
[2024-05-20 07:22:05] -rw-r--r-- 1 boinc boinc      2616 May 20 02:31 pandaJob.out
[2024-05-20 07:22:05] -rw------- 1 boinc boinc       424 May 20 02:31 setup.sh.local
[2024-05-20 07:22:05] -rw------- 1 boinc boinc   1013669 May 20 02:31 agis_schedconf.cvmfs.json
[2024-05-20 07:22:05] -rw------- 1 boinc boinc   1324701 May 20 02:31 cric_ddmendpoints.json
[2024-05-20 07:22:05] drwx------ 4 boinc boinc      4096 May 20 02:31 pilot3
[2024-05-20 07:22:05] -rw------- 1 boinc boinc 335157188 May 20 07:21 HITS.38920987._004479.pool.root.1
[2024-05-20 07:22:05] -rw-r--r-- 1 boinc boinc       531 May 20 07:21 boinc_task_state.xml
[2024-05-20 07:22:05] -rw------- 1 boinc boinc        95 May 20 07:21 pilot_heartbeat.json
[2024-05-20 07:22:05] -rw------- 1 boinc boinc      1043 May 20 07:21 memory_monitor_summary.json
[2024-05-20 07:22:05] -rw------- 1 boinc boinc         0 May 20 07:21 agis_ddmendpoints.agis.ALL.json
[2024-05-20 07:22:05] -rw------- 1 boinc boinc    388396 May 20 07:21 log.38920987._004479.job.log.tgz.1
[2024-05-20 07:22:05] -rw------- 1 boinc boinc      7719 May 20 07:21 heartbeat.json
[2024-05-20 07:22:05] -rw-r--r-- 1 boinc boinc      8192 May 20 07:22 boinc_mmap_file
[2024-05-20 07:22:05] -rw-r--r-- 1 boinc boinc        28 May 20 07:22 wrapper_checkpoint.txt
[2024-05-20 07:22:05] -rw------- 1 boinc boinc      4418 May 20 07:22 pilotlog.txt
[2024-05-20 07:22:05] -rw------- 1 boinc boinc   1965816 May 20 07:22 log.38920987._004479.job.log.1
[2024-05-20 07:22:05] -rw------- 1 boinc boinc       357 May 20 07:22 output.list
[2024-05-20 07:22:05] -rw-r--r-- 1 boinc boinc       620 May 20 07:22 runtime_log
[2024-05-20 07:22:05] -rw------- 1 boinc boinc   2375680 May 20 07:22 result.tar.gz
[2024-05-20 07:22:05] -rw-r--r-- 1 boinc boinc     11429 May 20 07:22 runtime_log.err
[2024-05-20 07:22:05] -rw------- 1 boinc boinc       659 May 20 07:22 h2LKDm5NIS5n7Olcko1bjSoqABFKDmABFKDmOtvXDmptZKDmZSBR6m.diag
[2024-05-20 07:22:05] -rw-r--r-- 1 boinc boinc     21440 May 20 07:22 stderr.txt
[2024-05-20 07:22:05] HITS file was successfully produced:
[2024-05-20 07:22:05] -rw------- 1 boinc boinc 335157188 May 20 07:21 shared/HITS.pool.root.1
[2024-05-20 07:22:05]  *** Contents of shared directory: ***
[2024-05-20 07:22:05] total 954120
[2024-05-20 07:22:05] -rw-r--r-- 2 boinc boinc 638967816 May 20 02:31 ATLAS.root_0
[2024-05-20 07:22:05] -rw-r--r-- 2 boinc boinc     17537 May 20 02:31 start_atlas.sh
[2024-05-20 07:22:05] -rw-r--r-- 2 boinc boinc    480002 May 20 02:31 input.tar.gz
[2024-05-20 07:22:05] -rw------- 1 boinc boinc 335157188 May 20 07:21 HITS.pool.root.1
[2024-05-20 07:22:05] -rw------- 1 boinc boinc   2375680 May 20 07:22 result.tar.gz
07:22:07 (3621798): run_atlas exited; CPU time 65852.161241
07:22:07 (3621798): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN