Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:17:57 (2625678): wrapper (7.7.26015): starting
15:17:57 (2625678): wrapper: running run_atlas (--nthreads 4)
[2024-05-20 15:17:57] Arguments: --nthreads 4
[2024-05-20 15:17:57] Threads: 4
[2024-05-20 15:17:57] Checking for CVMFS
[2024-05-20 15:17:57] No cvmfs_config command found, will try listing directly
[2024-05-20 15:17:57] CVMFS is ok
[2024-05-20 15:17:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-20 15:17:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-20 15:17:57] Further information can be found at the LHC@home message board.
[2024-05-20 15:17:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-20 15:17:57] Checking for apptainer binary...
[2024-05-20 15:17:57] which: no apptainer in ((null))
[2024-05-20 15:17:57] apptainer is not installed, using version from CVMFS
[2024-05-20 15:17:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-20 15:17:59] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2024-05-20 15:17:59] apptainer works
[2024-05-20 15:17:59] Set ATHENA_PROC_NUMBER=4
[2024-05-20 15:17:59] Set ATHENA_CORE_NUMBER=4
[2024-05-20 15:17:59] Starting ATLAS job with PandaID=6208280634
[2024-05-20 15:17:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-20 17:52:23]  *** The last 200 lines of the pilot log: ***
[2024-05-20 17:52:23] 2024-05-20 15:52:02,071 | INFO     | sum of square deviations: 964976232.5
[2024-05-20 17:52:23] 2024-05-20 15:52:02,072 | INFO     | sum of deviations: 40242648733.00001
[2024-05-20 17:52:23] 2024-05-20 15:52:02,072 | INFO     | mean x: 1716215534.5
[2024-05-20 17:52:23] 2024-05-20 15:52:02,072 | INFO     | mean y: 2295613.698630137
[2024-05-20 17:52:23] 2024-05-20 15:52:02,073 | INFO     | -- intersect: -71569476393.65115
[2024-05-20 17:52:23] 2024-05-20 15:52:02,073 | INFO     | intersect: -71569476393.65115
[2024-05-20 17:52:23] 2024-05-20 15:52:02,073 | INFO     | chi2: 3.9855618583221517
[2024-05-20 17:52:23] 2024-05-20 15:52:02,073 | INFO     | current chi2=3.9855618583221517 (change=-0.12192991793852999 %)
[2024-05-20 17:52:23] 2024-05-20 15:52:02,073 | INFO     | right removable region: 145
[2024-05-20 17:52:23] 2024-05-20 15:52:02,073 | INFO     | model: linear, x: [1716211417.0, 1716211478.0, 1716211539.0, 1716211600.0, 1716211661.0, 1716211722.0, 1716211783.0, 1716211844.0, 1716211905.0, 1716211966.0, 1716
[2024-05-20 17:52:23] 2024-05-20 15:52:02,074 | INFO     | sum of square deviations: 964976232.5
[2024-05-20 17:52:23] 2024-05-20 15:52:02,075 | INFO     | sum of deviations: 9097411961.0
[2024-05-20 17:52:23] 2024-05-20 15:52:02,075 | INFO     | mean x: 1716215839.5
[2024-05-20 17:52:23] 2024-05-20 15:52:02,075 | INFO     | mean y: 2344909.3698630137
[2024-05-20 17:52:23] 2024-05-20 15:52:02,075 | INFO     | -- intersect: -16177455152.104662
[2024-05-20 17:52:23] 2024-05-20 15:52:02,075 | INFO     | intersect: -16177455152.104662
[2024-05-20 17:52:23] 2024-05-20 15:52:02,075 | INFO     | chi2: 1.651216520535053
[2024-05-20 17:52:23] 2024-05-20 15:52:02,075 | INFO     | current chi2=1.651216520535053 (change=58.51952858211293 %)
[2024-05-20 17:52:23] 2024-05-20 15:52:02,075 | INFO     | model: linear, x: [1716211722.0, 1716211783.0, 1716211844.0, 1716211905.0, 1716211966.0, 1716212027.0, 1716212088.0, 1716212149.0, 1716212210.0, 1716212271.0, 1716
[2024-05-20 17:52:23] 2024-05-20 15:52:02,076 | INFO     | sum of square deviations: 869188390.0
[2024-05-20 17:52:23] 2024-05-20 15:52:02,076 | INFO     | sum of deviations: -18044907576.999996
[2024-05-20 17:52:23] 2024-05-20 15:52:02,076 | INFO     | mean x: 1716215992.0
[2024-05-20 17:52:23] 2024-05-20 15:52:02,077 | INFO     | mean y: 2388134.1773049645
[2024-05-20 17:52:23] 2024-05-20 15:52:02,077 | INFO     | -- intersect: 35632131138.2335
[2024-05-20 17:52:23] 2024-05-20 15:52:02,077 | INFO     | intersect: 35632131138.2335
[2024-05-20 17:52:23] 2024-05-20 15:52:02,077 | INFO     | chi2: 0.1338846965841908
[2024-05-20 17:52:23] 2024-05-20 15:52:02,077 | INFO     | current chi2=0.1338846965841908 (change=91.8917540541075 %)
[2024-05-20 17:52:23] 2024-05-20 15:52:02,077 | INFO     | model: linear, x: [1716212027.0, 1716212088.0, 1716212149.0, 1716212210.0, 1716212271.0, 1716212332.0, 1716212393.0, 1716212454.0, 1716212515.0, 1716212576.0, 1716
[2024-05-20 17:52:23] 2024-05-20 15:52:02,077 | INFO     | sum of square deviations: 779958810.0
[2024-05-20 17:52:23] 2024-05-20 15:52:02,078 | INFO     | sum of deviations: -20559649931.5
[2024-05-20 17:52:23] 2024-05-20 15:52:02,078 | INFO     | mean x: 1716216144.5
[2024-05-20 17:52:23] 2024-05-20 15:52:02,078 | INFO     | mean y: 2392298.875
[2024-05-20 17:52:23] 2024-05-20 15:52:02,078 | INFO     | -- intersect: 45241708382.38538
[2024-05-20 17:52:23] 2024-05-20 15:52:02,078 | INFO     | intersect: 45241708382.38538
[2024-05-20 17:52:23] 2024-05-20 15:52:02,079 | INFO     | chi2: 0.05772555926428512
[2024-05-20 17:52:23] 2024-05-20 15:52:02,079 | INFO     | current chi2=0.05772555926428512 (change=56.88412437191018 %)
[2024-05-20 17:52:23] 2024-05-20 15:52:02,079 | INFO     | model: linear, x: [1716212332.0, 1716212393.0, 1716212454.0, 1716212515.0, 1716212576.0, 1716212637.0, 1716212698.0, 1716212759.0, 1716212820.0, 1716212881.0, 1716
[2024-05-20 17:52:23] 2024-05-20 15:52:02,079 | INFO     | sum of square deviations: 697054930.0
[2024-05-20 17:52:23] 2024-05-20 15:52:02,080 | INFO     | sum of deviations: -17699153903.999996
[2024-05-20 17:52:23] 2024-05-20 15:52:02,080 | INFO     | mean x: 1716216297.0
[2024-05-20 17:52:23] 2024-05-20 15:52:02,080 | INFO     | mean y: 2386977.6488549616
[2024-05-20 17:52:23] 2024-05-20 15:52:02,080 | INFO     | -- intersect: 43579406615.33504
[2024-05-20 17:52:23] 2024-05-20 15:52:02,080 | INFO     | intersect: 43579406615.33504
[2024-05-20 17:52:23] 2024-05-20 15:52:02,080 | INFO     | chi2: 0.05116342963776525
[2024-05-20 17:52:23] 2024-05-20 15:52:02,080 | INFO     | current chi2=0.05116342963776525 (change=11.36780606399403 %)
[2024-05-20 17:52:23] 2024-05-20 15:52:02,081 | INFO     | left removable region: 40
[2024-05-20 17:52:23] 2024-05-20 15:52:02,081 | INFO     | model: linear, x: [1716213552.0, 1716213613.0, 1716213674.0, 1716213735.0, 1716213796.0, 1716213857.0, 1716213918.0, 1716213979.0, 1716214040.0, 1716214101.0, 1716
[2024-05-20 17:52:23] 2024-05-20 15:52:02,081 | INFO     | sum of square deviations: 358927660.0
[2024-05-20 17:52:23] 2024-05-20 15:52:02,081 | INFO     | sum of deviations: -5631609181.999998
[2024-05-20 17:52:23] 2024-05-20 15:52:02,081 | INFO     | mean x: 1716216724.0
[2024-05-20 17:52:23] 2024-05-20 15:52:02,082 | INFO     | mean y: 2362662.685714286
[2024-05-20 17:52:23] 2024-05-20 15:52:02,082 | INFO     | -- intersect: 26929966573.68092
[2024-05-20 17:52:23] 2024-05-20 15:52:02,082 | INFO     | intersect: 26929966573.68092
[2024-05-20 17:52:23] 2024-05-20 15:52:02,082 | INFO     | chi2: 0.015313935137008964
[2024-05-20 17:52:23] 2024-05-20 15:52:02,082 | INFO     | -- intersect: 26929966573.68092
[2024-05-20 17:52:23] 2024-05-20 15:52:02,082 | INFO     | current memory leak: -15.69 B/s (using 105 data points, chi2=0.02)
[2024-05-20 17:52:23] 2024-05-20 15:52:02,083 | INFO     | ..............................
[2024-05-20 17:52:23] 2024-05-20 15:52:02,083 | INFO     | . Timing measurements:
[2024-05-20 17:52:23] 2024-05-20 15:52:02,083 | INFO     | . get job = 0 s
[2024-05-20 17:52:23] 2024-05-20 15:52:02,083 | INFO     | . initial setup = 1 s
[2024-05-20 17:52:23] 2024-05-20 15:52:02,083 | INFO     | . payload setup = 5 s
[2024-05-20 17:52:23] 2024-05-20 15:52:02,083 | INFO     | . stage-in = 0 s
[2024-05-20 17:52:23] 2024-05-20 15:52:02,083 | INFO     | . payload execution = 9205 s
[2024-05-20 17:52:23] 2024-05-20 15:52:02,083 | INFO     | . stage-out = 0 s
[2024-05-20 17:52:23] 2024-05-20 15:52:02,083 | INFO     | . log creation = 0 s
[2024-05-20 17:52:23] 2024-05-20 15:52:02,083 | INFO     | ..............................
[2024-05-20 17:52:23] 2024-05-20 15:52:02,211 | WARNING  | process 2637073 is no longer using CPU - aborting
[2024-05-20 17:52:23] 2024-05-20 15:52:02,211 | INFO     | aborting job monitoring since job object (job id=6208280634) has expired
[2024-05-20 17:52:23] 2024-05-20 15:52:02,306 | INFO     | 
[2024-05-20 17:52:23] 2024-05-20 15:52:02,306 | INFO     | job summary report
[2024-05-20 17:52:23] 2024-05-20 15:52:02,306 | INFO     | --------------------------------------------------
[2024-05-20 17:52:23] 2024-05-20 15:52:02,306 | INFO     | PanDA job id: 6208280634
[2024-05-20 17:52:23] 2024-05-20 15:52:02,306 | INFO     | task id: 38776104
[2024-05-20 17:52:23] 2024-05-20 15:52:02,306 | INFO     | errors: (none)
[2024-05-20 17:52:23] 2024-05-20 15:52:02,306 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-20 17:52:23] 2024-05-20 15:52:02,306 | INFO     | pilot state: finished 
[2024-05-20 17:52:23] 2024-05-20 15:52:02,307 | INFO     | transexitcode: 0
[2024-05-20 17:52:23] 2024-05-20 15:52:02,307 | INFO     | exeerrorcode: 0
[2024-05-20 17:52:23] 2024-05-20 15:52:02,307 | INFO     | exeerrordiag: 
[2024-05-20 17:52:23] 2024-05-20 15:52:02,307 | INFO     | exitcode: 0
[2024-05-20 17:52:23] 2024-05-20 15:52:02,307 | INFO     | exitmsg: OK
[2024-05-20 17:52:23] 2024-05-20 15:52:02,307 | INFO     | cpuconsumptiontime: 34222 s
[2024-05-20 17:52:23] 2024-05-20 15:52:02,307 | INFO     | nevents: 400
[2024-05-20 17:52:23] 2024-05-20 15:52:02,307 | INFO     | neventsw: 0
[2024-05-20 17:52:23] 2024-05-20 15:52:02,307 | INFO     | pid: 2637073
[2024-05-20 17:52:23] 2024-05-20 15:52:02,307 | INFO     | pgrp: 2637073
[2024-05-20 17:52:23] 2024-05-20 15:52:02,307 | INFO     | corecount: 4
[2024-05-20 17:52:23] 2024-05-20 15:52:02,307 | INFO     | event service: False
[2024-05-20 17:52:23] 2024-05-20 15:52:02,307 | INFO     | sizes: {0: 2392262, 4: 2392468, 11: 2392496, 9214: 2420827, 9215: 2429865, 9220: 2429979}
[2024-05-20 17:52:23] 2024-05-20 15:52:02,307 | INFO     | --------------------------------------------------
[2024-05-20 17:52:23] 2024-05-20 15:52:02,307 | INFO     | 
[2024-05-20 17:52:23] 2024-05-20 15:52:02,308 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2024-05-20 17:52:23] 2024-05-20 15:52:02,334 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-20 17:52:23] 2024-05-20 15:52:02,335 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-20 17:52:23] 2024-05-20 15:52:02,335 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-20 17:52:23] 2024-05-20 15:52:02,335 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-20 17:52:23] 2024-05-20 15:52:02,335 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-20 17:52:23] 2024-05-20 15:52:02,335 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-20 17:52:23] 2024-05-20 15:52:02,335 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-20 17:52:23] 2024-05-20 15:52:02,335 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-20 17:52:23] 2024-05-20 15:52:02,336 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-20 17:52:23] 2024-05-20 15:52:02,336 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-20 17:52:23] 2024-05-20 15:52:02,336 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-20 17:52:23] 2024-05-20 15:52:02,336 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-20 17:52:23] 2024-05-20 15:52:02,336 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-20 17:52:23] 2024-05-20 15:52:02,336 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-20 17:52:23] 2024-05-20 15:52:02,336 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-20 17:52:23] 2024-05-20 15:52:02,336 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-20 17:52:23] 2024-05-20 15:52:02,336 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-20 17:52:23] 2024-05-20 15:52:02,337 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-20 17:52:23] 2024-05-20 15:52:02,337 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-20 17:52:23] 2024-05-20 15:52:02,337 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-20 17:52:23] 2024-05-20 15:52:02,337 | INFO     | job 6208280634 has completed (purged errors)
[2024-05-20 17:52:23] 2024-05-20 15:52:02,337 | INFO     | overall cleanup function is called
[2024-05-20 17:52:23] 2024-05-20 15:52:03,345 | INFO     | --- collectZombieJob: --- 10, [2637073]
[2024-05-20 17:52:23] 2024-05-20 15:52:03,346 | INFO     | zombie collector waiting for pid 2637073
[2024-05-20 17:52:23] 2024-05-20 15:52:03,346 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-20 17:52:23] 2024-05-20 15:52:04,351 | INFO     | collected zombie processes
[2024-05-20 17:52:23] 2024-05-20 15:52:04,351 | INFO     | will now attempt to kill all subprocesses of pid=2637073
[2024-05-20 17:52:23] 2024-05-20 15:52:04,540 | INFO     | process IDs to be killed: [2637073] (in reverse order)
[2024-05-20 17:52:23] 2024-05-20 15:52:04,683 | WARNING  | found no corresponding commands to process id(s)
[2024-05-20 17:52:23] 2024-05-20 15:52:04,683 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-20 17:52:23] 2024-05-20 15:52:04,694 | INFO     | did not find any defunct processes belonging to 2637073
[2024-05-20 17:52:23] 2024-05-20 15:52:04,704 | INFO     | did not find any defunct processes belonging to 2637073
[2024-05-20 17:52:23] 2024-05-20 15:52:04,704 | INFO     | ready for new job
[2024-05-20 17:52:23] 2024-05-20 15:52:04,704 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-20 17:52:23] 2024-05-20 15:52:04,706 | INFO     | *************************************
[2024-05-20 17:52:23] 2024-05-20 15:52:04,706 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-20 17:52:23] 2024-05-20 15:52:04,706 | INFO     | *************************************
[2024-05-20 17:52:23] 2024-05-20 15:52:04,706 | INFO     | 
[2024-05-20 17:52:23] 2024-05-20 15:52:04,711 | INFO     | architecture information:
[2024-05-20 17:52:23] 2024-05-20 15:52:04,711 | INFO     | executing command: cat /etc/os-release
[2024-05-20 17:52:23] 2024-05-20 15:52:04,732 | INFO     | cat /etc/os-release:
[2024-05-20 17:52:23] NAME="CentOS Linux"
[2024-05-20 17:52:23] VERSION="7 (Core)"
[2024-05-20 17:52:23] ID="centos"
[2024-05-20 17:52:23] ID_LIKE="rhel fedora"
[2024-05-20 17:52:23] VERSION_ID="7"
[2024-05-20 17:52:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-20 17:52:23] ANSI_COLOR="0;31"
[2024-05-20 17:52:23] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-20 17:52:23] HOME_URL="https://www.centos.org/"
[2024-05-20 17:52:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-20 17:52:23] 
[2024-05-20 17:52:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-20 17:52:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-20 17:52:23] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-20 17:52:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-20 17:52:23] 
[2024-05-20 17:52:23] 2024-05-20 15:52:04,733 | INFO     | *************************************
[2024-05-20 17:52:23] 2024-05-20 15:52:05,236 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2024-05-20 17:52:23] 2024-05-20 15:52:05,263 | INFO     | sufficient remaining disk space (582578339840 B)
[2024-05-20 17:52:23] 2024-05-20 15:52:05,263 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-20 17:52:23] 2024-05-20 15:52:05,264 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-20 17:52:23] 2024-05-20 15:52:05,264 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-20 17:52:23] 2024-05-20 15:52:05,264 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-20 17:52:23] 2024-05-20 15:52:05,265 | INFO     | found 0 job(s) in 20 queues
[2024-05-20 17:52:23] 2024-05-20 15:52:05,265 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-20 17:52:23] 2024-05-20 15:52:05,265 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-20 17:52:23] 2024-05-20 15:52:05,688 | INFO     | all job control threads have been joined
[2024-05-20 17:52:23] 2024-05-20 15:52:05,720 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-20 17:52:23] 2024-05-20 15:52:05,720 | INFO     | aborting loop
[2024-05-20 17:52:23] 2024-05-20 15:52:05,759 | INFO     | all data control threads have been joined
[2024-05-20 17:52:23] 2024-05-20 15:52:06,268 | INFO     | [job] retrieve thread has finished
[2024-05-20 17:52:23] 2024-05-20 15:52:06,389 | INFO     | all payload control threads have been joined
[2024-05-20 17:52:23] 2024-05-20 15:52:06,530 | INFO     | [job] validate thread has finished
[2024-05-20 17:52:23] 2024-05-20 15:52:06,623 | INFO     | [payload] validate_pre thread has finished
[2024-05-20 17:52:23] 2024-05-20 15:52:06,693 | INFO     | [job] control thread has finished
[2024-05-20 17:52:23] 2024-05-20 15:52:06,725 | INFO     | [job] job monitor thread has finished
[2024-05-20 17:52:23] 2024-05-20 15:52:06,726 | INFO     | [payload] validate_post thread has finished
[2024-05-20 17:52:23] 2024-05-20 15:52:06,745 | INFO     | [job] create_data_payload thread has finished
[2024-05-20 17:52:23] 2024-05-20 15:52:06,764 | INFO     | [data] control thread has finished
[2024-05-20 17:52:23] 2024-05-20 15:52:07,175 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-20 17:52:23] 2024-05-20 15:52:07,269 | INFO     | [data] copytool_out thread has finished
[2024-05-20 17:52:23] 2024-05-20 15:52:07,306 | INFO     | [payload] execute_payloads thread has finished
[2024-05-20 17:52:23] 2024-05-20 15:52:07,362 | INFO     | [payload] failed_post thread has finished
[2024-05-20 17:52:23] 2024-05-20 15:52:07,395 | INFO     | [payload] control thread has finished
[2024-05-20 17:52:23] 2024-05-20 15:52:07,471 | INFO     | [data] copytool_in thread has finished
[2024-05-20 17:52:23] 2024-05-20 15:52:07,879 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-20 17:52:23] 2024-05-20 15:52:08,180 | INFO     | [job] queue monitor thread has finished
[2024-05-20 17:52:23] 2024-05-20 15:52:11,885 | INFO     | [data] queue_monitor thread has finished
[2024-05-20 17:52:23] 2024-05-20 15:52:15,325 | INFO     | job.realtimelogging is not enabled
[2024-05-20 17:52:23] 2024-05-20 15:52:16,330 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-20 17:52:23] 2024-05-20 15:52:18,013 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 46971472520256)>', '<ExcThread(monitor, started 46971914032896)>']
[2024-05-20 17:52:23] 2024-05-20 15:52:18,330 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-20 17:52:23] 2024-05-20 15:52:18,331 | INFO     | [monitor] control thread has ended
[2024-05-20 17:52:23] 2024-05-20 15:52:23,038 | INFO     | all workflow threads have been joined
[2024-05-20 17:52:23] 2024-05-20 15:52:23,038 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-20 17:52:23] 2024-05-20 15:52:23,039 | INFO     | traces error code: 0
[2024-05-20 17:52:23] 2024-05-20 15:52:23,039 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-20 17:52:23] 2024-05-20 15:52:23,132 [wrapper] ==== pilot stdout END ====
[2024-05-20 17:52:23] 2024-05-20 15:52:23,136 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-20 17:52:23] 2024-05-20 15:52:23,140 [wrapper] pilotpid: 2630022
[2024-05-20 17:52:23] 2024-05-20 15:52:23,144 [wrapper] Pilot exit status: 0
[2024-05-20 17:52:23] 2024-05-20 15:52:23,156 [wrapper] pandaids: 6208280634
[2024-05-20 17:52:23] 2024-05-20 15:52:23,224 [wrapper] cleanup: SIGTERM to supervisor_pilot 3008414 2630023
[2024-05-20 17:52:23] 2024-05-20 15:52:23,227 [wrapper] Test setup, not cleaning
[2024-05-20 17:52:23] 2024-05-20 15:52:23,229 [wrapper] ==== wrapper stdout END ====
[2024-05-20 17:52:23] 2024-05-20 15:52:23,231 [wrapper] ==== wrapper stderr END ====
[2024-05-20 17:52:23] 2024-05-20 15:52:23,235 [wrapper] apfmon messages muted
[2024-05-20 17:52:23]  *** Error codes and diagnostics ***
[2024-05-20 17:52:23]     "exeErrorCode": 0,
[2024-05-20 17:52:23]     "exeErrorDiag": "",
[2024-05-20 17:52:23]     "pilotErrorCode": 0,
[2024-05-20 17:52:23]     "pilotErrorDiag": "",
[2024-05-20 17:52:23]  *** Listing of results directory ***
[2024-05-20 17:52:23] total 813560
[2024-05-20 17:52:23] -rw-r--r-- 1 boinc boinc    467845 May 17 19:56 pilot3.tar.gz
[2024-05-20 17:52:23] -rw-r--r-- 1 boinc boinc      5633 May 17 20:26 queuedata.json
[2024-05-20 17:52:23] -rwx------ 1 boinc boinc     32251 May 17 20:27 runpilot2-wrapper.sh
[2024-05-20 17:52:23] -rw-r--r-- 1 boinc boinc       100 May 20 15:17 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-20 17:52:23] -rwxr-xr-x 1 boinc boinc      7986 May 20 15:17 run_atlas
[2024-05-20 17:52:23] -rw-r--r-- 1 boinc boinc       105 May 20 15:17 job.xml
[2024-05-20 17:52:23] -rw-r--r-- 2 boinc boinc 598868019 May 20 15:17 EVNT.38776100._000162.pool.root.1
[2024-05-20 17:52:23] -rw-r--r-- 1 boinc boinc      6663 May 20 15:17 init_data.xml
[2024-05-20 17:52:23] -rw-r--r-- 2 boinc boinc     17537 May 20 15:17 start_atlas.sh
[2024-05-20 17:52:23] drwxrwx--x 2 boinc boinc      4096 May 20 15:17 shared
[2024-05-20 17:52:23] -rw-r--r-- 2 boinc boinc    480014 May 20 15:17 input.tar.gz
[2024-05-20 17:52:23] -rw-r--r-- 1 boinc boinc         0 May 20 15:17 boinc_lockfile
[2024-05-20 17:52:23] -rw-r--r-- 1 boinc boinc      2641 May 20 15:17 pandaJob.out
[2024-05-20 17:52:23] -rw------- 1 boinc boinc       424 May 20 15:17 setup.sh.local
[2024-05-20 17:52:23] -rw------- 1 boinc boinc   1013965 May 20 15:18 agis_schedconf.cvmfs.json
[2024-05-20 17:52:23] -rw------- 1 boinc boinc         0 May 20 15:18 agis_ddmendpoints.agis.ALL.json
[2024-05-20 17:52:23] -rw------- 1 boinc boinc   1324701 May 20 15:18 cric_ddmendpoints.json
[2024-05-20 17:52:23] drwx------ 4 boinc boinc      4096 May 20 15:18 pilot3
[2024-05-20 17:52:23] -rw------- 1 boinc boinc 228181568 May 20 17:51 HITS.38776104._013955.pool.root.1
[2024-05-20 17:52:23] -rw------- 1 boinc boinc        95 May 20 17:51 pilot_heartbeat.json
[2024-05-20 17:52:23] -rw-r--r-- 1 boinc boinc       530 May 20 17:51 boinc_task_state.xml
[2024-05-20 17:52:23] -rw------- 1 boinc boinc      1049 May 20 17:51 memory_monitor_summary.json
[2024-05-20 17:52:23] -rw------- 1 boinc boinc    278302 May 20 17:51 log.38776104._013955.job.log.tgz.1
[2024-05-20 17:52:23] -rw-r--r-- 1 boinc boinc        27 May 20 17:52 wrapper_checkpoint.txt
[2024-05-20 17:52:23] -rw-r--r-- 1 boinc boinc      8192 May 20 17:52 boinc_mmap_file
[2024-05-20 17:52:23] -rw------- 1 boinc boinc      7767 May 20 17:52 heartbeat.json
[2024-05-20 17:52:23] -rw------- 1 boinc boinc      4416 May 20 17:52 pilotlog.txt
[2024-05-20 17:52:23] -rw------- 1 boinc boinc    976598 May 20 17:52 log.38776104._013955.job.log.1
[2024-05-20 17:52:23] -rw------- 1 boinc boinc       357 May 20 17:52 output.list
[2024-05-20 17:52:23] -rw-r--r-- 1 boinc boinc       620 May 20 17:52 runtime_log
[2024-05-20 17:52:23] -rw------- 1 boinc boinc   1269760 May 20 17:52 result.tar.gz
[2024-05-20 17:52:23] -rw------- 1 boinc boinc       655 May 20 17:52 sXhLDmlTHS5nsSi4apGgGQJmABFKDmABFKDm4ySLDm0ORKDmC9of0n.diag
[2024-05-20 17:52:23] -rw-r--r-- 1 boinc boinc     11409 May 20 17:52 runtime_log.err
[2024-05-20 17:52:23] -rw-r--r-- 1 boinc boinc     21247 May 20 17:52 stderr.txt
[2024-05-20 17:52:23] HITS file was successfully produced:
[2024-05-20 17:52:23] -rw------- 1 boinc boinc 228181568 May 20 17:51 shared/HITS.pool.root.1
[2024-05-20 17:52:23]  *** Contents of shared directory: ***
[2024-05-20 17:52:23] total 809412
[2024-05-20 17:52:23] -rw-r--r-- 2 boinc boinc 598868019 May 20 15:17 ATLAS.root_0
[2024-05-20 17:52:23] -rw-r--r-- 2 boinc boinc     17537 May 20 15:17 start_atlas.sh
[2024-05-20 17:52:23] -rw-r--r-- 2 boinc boinc    480014 May 20 15:17 input.tar.gz
[2024-05-20 17:52:23] -rw------- 1 boinc boinc 228181568 May 20 17:51 HITS.pool.root.1
[2024-05-20 17:52:23] -rw------- 1 boinc boinc   1269760 May 20 17:52 result.tar.gz
17:52:25 (2625678): run_atlas exited; CPU time 34031.386199
17:52:25 (2625678): called boinc_finish(0)

</stderr_txt>
]]>

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