Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
01:18:31 (76206): wrapper (7.7.26015): starting
01:18:31 (76206): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 01:18:31] Arguments: --nthreads 12
[2024-05-18 01:18:31] Threads: 12
[2024-05-18 01:18:31] Checking for CVMFS
[2024-05-18 01:18:31] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 01:18:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 01:18:31] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 01:18:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 01:18:31] 2.10.1.0 2745 173410 185996 132872 1 126 27353982 45568001 11378 130560 0 1118479931 99.772 650474610 18764 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-05-18 01:18:31] CVMFS is ok
[2024-05-18 01:18:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 01:18:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 01:18:31] Further information can be found at the LHC@home message board.
[2024-05-18 01:18:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 01:18:31] Checking for apptainer binary...
[2024-05-18 01:18:31] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 01:18:31] Running /usr/bin/apptainer --version
[2024-05-18 01:18:31] apptainer version 1.1.8-1.el7
[2024-05-18 01:18:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 01:18:32] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0086.triumf.lcg
[2024-05-18 01:18:32] apptainer works
[2024-05-18 01:18:32] Set ATHENA_PROC_NUMBER=12
[2024-05-18 01:18:32] Set ATHENA_CORE_NUMBER=12
[2024-05-18 01:18:32] Starting ATLAS job with PandaID=6208280093
[2024-05-18 01:18:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 06:02:03]  *** The last 200 lines of the pilot log: ***
[2024-05-18 06:02:04] 2024-05-18 13:01:38,414 | INFO     | preparing for final server update for job 6208280093 in state='finished'
[2024-05-18 06:02:04] 2024-05-18 13:01:38,778 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2024-05-18 06:02:04] 2024-05-18 13:01:38,779 | INFO     | this job has now completed (state=finished)
[2024-05-18 06:02:04] 2024-05-18 13:01:38,779 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-18 06:02:04] 2024-05-18 13:01:38,779 | INFO     | job 6208280093 has finished - writing final server update
[2024-05-18 06:02:04] 2024-05-18 13:01:38,780 | INFO     | total number of processed events: 1850 (read)
[2024-05-18 06:02:04] 2024-05-18 13:01:38,786 | INFO     | executing command: lscpu
[2024-05-18 06:02:04] 2024-05-18 13:01:38,840 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-18 06:02:04] 2024-05-18 13:01:38,840 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 06:02:04] 2024-05-18 13:01:38,889 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 06:02:04] 2024-05-18 13:01:39,091 | INFO     | monitor loop #1307: job 0:6208280093 is in state 'finished'
[2024-05-18 06:02:04] 2024-05-18 13:01:39,092 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 06:02:04] 2024-05-18 13:01:41,595 | INFO     | monitor loop #1308: job 0:6208280093 is in state 'finished'
[2024-05-18 06:02:04] 2024-05-18 13:01:41,595 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 06:02:04] 2024-05-18 13:01:42,674 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-18 06:02:04] 2024-05-18 13:01:42,675 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6208280093/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 06:02:04] 2024-05-18 13:01:42,676 | INFO     | extracted standard info from prmon json
[2024-05-18 06:02:04] 2024-05-18 13:01:42,676 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 06:02:04] 2024-05-18 13:01:42,676 | WARNING  | GPU info not found in prmon json
[2024-05-18 06:02:04] 2024-05-18 13:01:42,679 | INFO     | fitting pss+swap vs Time
[2024-05-18 06:02:04] 2024-05-18 13:01:42,679 | INFO     | model: linear, x: [1716020350.0, 1716020411.0, 1716020472.0, 1716020533.0, 1716020594.0, 1716020655.0, 1716020716.0, 1716020777.0, 1716020838.0, 1716020899.0, 1716
[2024-05-18 06:02:04] 2024-05-18 13:01:42,679 | INFO     | sum of square deviations: 6662039329.5
[2024-05-18 06:02:04] 2024-05-18 13:01:42,681 | INFO     | sum of deviations: 620451896525.9999
[2024-05-18 06:02:04] 2024-05-18 13:01:42,681 | INFO     | mean x: 1716028798.5
[2024-05-18 06:02:04] 2024-05-18 13:01:42,681 | INFO     | mean y: 3647450.690647482
[2024-05-18 06:02:04] 2024-05-18 13:01:42,681 | INFO     | -- intersect: -159814280643.47852
[2024-05-18 06:02:04] 2024-05-18 13:01:42,681 | INFO     | intersect: -159814280643.47852
[2024-05-18 06:02:04] 2024-05-18 13:01:42,681 | INFO     | chi2: 23.749377858390943
[2024-05-18 06:02:04] 2024-05-18 13:01:42,681 | INFO     | model: linear, x: [1716020350.0, 1716020411.0, 1716020472.0, 1716020533.0, 1716020594.0, 1716020655.0, 1716020716.0, 1716020777.0, 1716020838.0, 1716020899.0, 1716
[2024-05-18 06:02:04] 2024-05-18 13:01:42,681 | INFO     | sum of square deviations: 6309000152.0
[2024-05-18 06:02:04] 2024-05-18 13:01:42,682 | INFO     | sum of deviations: 742193901967.0001
[2024-05-18 06:02:04] 2024-05-18 13:01:42,683 | INFO     | mean x: 1716028646.0
[2024-05-18 06:02:04] 2024-05-18 13:01:42,683 | INFO     | mean y: 3700054.1575091574
[2024-05-18 06:02:04] 2024-05-18 13:01:42,683 | INFO     | -- intersect: -201870759602.9942
[2024-05-18 06:02:04] 2024-05-18 13:01:42,683 | INFO     | intersect: -201870759602.9942
[2024-05-18 06:02:04] 2024-05-18 13:01:42,683 | INFO     | chi2: 20.051538691334404
[2024-05-18 06:02:04] 2024-05-18 13:01:42,683 | INFO     | current chi2=20.051538691334404 (change=15.57025699412184 %)
[2024-05-18 06:02:04] 2024-05-18 13:01:42,683 | INFO     | right removable region: 272
[2024-05-18 06:02:04] 2024-05-18 13:01:42,683 | INFO     | model: linear, x: [1716020655.0, 1716020716.0, 1716020777.0, 1716020838.0, 1716020899.0, 1716020960.0, 1716021021.0, 1716021082.0, 1716021143.0, 1716021204.0, 1716
[2024-05-18 06:02:04] 2024-05-18 13:01:42,683 | INFO     | sum of square deviations: 6309000152.0
[2024-05-18 06:02:04] 2024-05-18 13:01:42,684 | INFO     | sum of deviations: 492253757896.00006
[2024-05-18 06:02:04] 2024-05-18 13:01:42,685 | INFO     | mean x: 1716028951.0
[2024-05-18 06:02:04] 2024-05-18 13:01:42,685 | INFO     | mean y: 3702788.5750915753
[2024-05-18 06:02:04] 2024-05-18 13:01:42,685 | INFO     | -- intersect: -133887829853.13803
[2024-05-18 06:02:04] 2024-05-18 13:01:42,685 | INFO     | intersect: -133887829853.13803
[2024-05-18 06:02:04] 2024-05-18 13:01:42,685 | INFO     | chi2: 19.868906638720244
[2024-05-18 06:02:04] 2024-05-18 13:01:42,685 | INFO     | current chi2=19.868906638720244 (change=16.33925420197768 %)
[2024-05-18 06:02:04] 2024-05-18 13:01:42,685 | INFO     | left removable region: 10
[2024-05-18 06:02:04] 2024-05-18 13:01:42,685 | INFO     | model: linear, x: [1716020960.0, 1716021021.0, 1716021082.0, 1716021143.0, 1716021204.0, 1716021265.0, 1716021326.0, 1716021387.0, 1716021448.0, 1716021509.0, 1716
[2024-05-18 06:02:04] 2024-05-18 13:01:42,685 | INFO     | sum of square deviations: 5576683165.5
[2024-05-18 06:02:04] 2024-05-18 13:01:42,686 | INFO     | sum of deviations: 524372816419.0
[2024-05-18 06:02:04] 2024-05-18 13:01:42,686 | INFO     | mean x: 1716028920.5
[2024-05-18 06:02:04] 2024-05-18 13:01:42,686 | INFO     | mean y: 3823246.5114503815
[2024-05-18 06:02:04] 2024-05-18 13:01:42,686 | INFO     | -- intersect: -161353544815.18344
[2024-05-18 06:02:04] 2024-05-18 13:01:42,686 | INFO     | intersect: -161353544815.18344
[2024-05-18 06:02:04] 2024-05-18 13:01:42,687 | INFO     | chi2: 12.475141259836864
[2024-05-18 06:02:04] 2024-05-18 13:01:42,687 | INFO     | -- intersect: -161353544815.18344
[2024-05-18 06:02:04] 2024-05-18 13:01:42,687 | INFO     | current memory leak: 94.03 B/s (using 262 data points, chi2=12.48)
[2024-05-18 06:02:04] 2024-05-18 13:01:42,687 | INFO     | ..............................
[2024-05-18 06:02:04] 2024-05-18 13:01:42,687 | INFO     | . Timing measurements:
[2024-05-18 06:02:04] 2024-05-18 13:01:42,687 | INFO     | . get job = 0 s
[2024-05-18 06:02:04] 2024-05-18 13:01:42,687 | INFO     | . initial setup = 1 s
[2024-05-18 06:02:04] 2024-05-18 13:01:42,687 | INFO     | . payload setup = 9 s
[2024-05-18 06:02:04] 2024-05-18 13:01:42,687 | INFO     | . stage-in = 0 s
[2024-05-18 06:02:04] 2024-05-18 13:01:42,687 | INFO     | . payload execution = 16941 s
[2024-05-18 06:02:04] 2024-05-18 13:01:42,687 | INFO     | . stage-out = 3 s
[2024-05-18 06:02:04] 2024-05-18 13:01:42,688 | INFO     | . log creation = 0 s
[2024-05-18 06:02:04] 2024-05-18 13:01:42,688 | INFO     | ..............................
[2024-05-18 06:02:04] 2024-05-18 13:01:42,746 | INFO     | 
[2024-05-18 06:02:04] 2024-05-18 13:01:42,746 | INFO     | job summary report
[2024-05-18 06:02:04] 2024-05-18 13:01:42,746 | INFO     | --------------------------------------------------
[2024-05-18 06:02:04] 2024-05-18 13:01:42,747 | INFO     | PanDA job id: 6208280093
[2024-05-18 06:02:04] 2024-05-18 13:01:42,747 | INFO     | task id: 38734053
[2024-05-18 06:02:04] 2024-05-18 13:01:42,747 | INFO     | errors: (none)
[2024-05-18 06:02:04] 2024-05-18 13:01:42,747 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 06:02:04] 2024-05-18 13:01:42,747 | INFO     | pilot state: finished 
[2024-05-18 06:02:04] 2024-05-18 13:01:42,747 | INFO     | transexitcode: 0
[2024-05-18 06:02:04] 2024-05-18 13:01:42,747 | INFO     | exeerrorcode: 0
[2024-05-18 06:02:04] 2024-05-18 13:01:42,747 | INFO     | exeerrordiag: 
[2024-05-18 06:02:04] 2024-05-18 13:01:42,747 | INFO     | exitcode: 0
[2024-05-18 06:02:04] 2024-05-18 13:01:42,747 | INFO     | exitmsg: OK
[2024-05-18 06:02:04] 2024-05-18 13:01:42,747 | INFO     | cpuconsumptiontime: 174674 s
[2024-05-18 06:02:04] 2024-05-18 13:01:42,747 | INFO     | nevents: 1850
[2024-05-18 06:02:04] 2024-05-18 13:01:42,747 | INFO     | neventsw: 0
[2024-05-18 06:02:04] 2024-05-18 13:01:42,747 | INFO     | pid: 87720
[2024-05-18 06:02:04] 2024-05-18 13:01:42,747 | INFO     | pgrp: 87720
[2024-05-18 06:02:04] 2024-05-18 13:01:42,747 | INFO     | corecount: 12
[2024-05-18 06:02:04] 2024-05-18 13:01:42,747 | INFO     | event service: False
[2024-05-18 06:02:04] 2024-05-18 13:01:42,747 | INFO     | sizes: {0: 2392637, 4: 2392843, 11: 2392871, 16954: 2444935, 16958: 2453889, 16960: 2453945, 16965: 2454295}
[2024-05-18 06:02:04] 2024-05-18 13:01:42,747 | INFO     | --------------------------------------------------
[2024-05-18 06:02:04] 2024-05-18 13:01:42,747 | INFO     | 
[2024-05-18 06:02:04] 2024-05-18 13:01:42,747 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 06:02:04] 2024-05-18 13:01:42,768 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 06:02:04] 2024-05-18 13:01:42,768 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 06:02:04] 2024-05-18 13:01:42,768 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 06:02:04] 2024-05-18 13:01:42,768 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 06:02:04] 2024-05-18 13:01:42,768 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 06:02:04] 2024-05-18 13:01:42,768 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 06:02:04] 2024-05-18 13:01:42,768 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 06:02:04] 2024-05-18 13:01:42,768 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 06:02:04] 2024-05-18 13:01:42,768 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 06:02:04] 2024-05-18 13:01:42,768 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 06:02:04] 2024-05-18 13:01:42,768 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 06:02:04] 2024-05-18 13:01:42,768 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 06:02:04] 2024-05-18 13:01:42,768 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 06:02:04] 2024-05-18 13:01:42,768 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 06:02:04] 2024-05-18 13:01:42,768 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 06:02:04] 2024-05-18 13:01:42,769 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 06:02:04] 2024-05-18 13:01:42,769 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 06:02:04] 2024-05-18 13:01:42,769 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 06:02:04] 2024-05-18 13:01:42,769 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 06:02:04] 2024-05-18 13:01:42,769 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 06:02:04] 2024-05-18 13:01:42,769 | INFO     | job 6208280093 has completed (purged errors)
[2024-05-18 06:02:04] 2024-05-18 13:01:42,769 | INFO     | overall cleanup function is called
[2024-05-18 06:02:04] 2024-05-18 13:01:43,783 | INFO     | --- collectZombieJob: --- 10, [87720]
[2024-05-18 06:02:04] 2024-05-18 13:01:43,783 | INFO     | zombie collector waiting for pid 87720
[2024-05-18 06:02:04] 2024-05-18 13:01:43,783 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 06:02:04] 2024-05-18 13:01:44,789 | INFO     | collected zombie processes
[2024-05-18 06:02:04] 2024-05-18 13:01:44,789 | INFO     | will now attempt to kill all subprocesses of pid=87720
[2024-05-18 06:02:04] 2024-05-18 13:01:44,978 | INFO     | process IDs to be killed: [87720] (in reverse order)
[2024-05-18 06:02:04] 2024-05-18 13:01:45,111 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 06:02:04] 2024-05-18 13:01:45,112 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 06:02:04] 2024-05-18 13:01:45,119 | INFO     | did not find any defunct processes belonging to 87720
[2024-05-18 06:02:04] 2024-05-18 13:01:45,124 | INFO     | did not find any defunct processes belonging to 87720
[2024-05-18 06:02:04] 2024-05-18 13:01:45,125 | INFO     | ready for new job
[2024-05-18 06:02:04] 2024-05-18 13:01:45,125 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 06:02:04] 2024-05-18 13:01:45,127 | INFO     | *************************************
[2024-05-18 06:02:04] 2024-05-18 13:01:45,127 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 06:02:04] 2024-05-18 13:01:45,127 | INFO     | *************************************
[2024-05-18 06:02:04] 2024-05-18 13:01:45,127 | INFO     | 
[2024-05-18 06:02:04] 2024-05-18 13:01:45,129 | INFO     | architecture information:
[2024-05-18 06:02:04] 2024-05-18 13:01:45,130 | INFO     | executing command: cat /etc/os-release
[2024-05-18 06:02:04] 2024-05-18 13:01:45,148 | INFO     | cat /etc/os-release:
[2024-05-18 06:02:04] NAME="CentOS Linux"
[2024-05-18 06:02:04] VERSION="7 (Core)"
[2024-05-18 06:02:04] ID="centos"
[2024-05-18 06:02:04] ID_LIKE="rhel fedora"
[2024-05-18 06:02:04] VERSION_ID="7"
[2024-05-18 06:02:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 06:02:04] ANSI_COLOR="0;31"
[2024-05-18 06:02:04] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 06:02:04] HOME_URL="https://www.centos.org/"
[2024-05-18 06:02:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 06:02:04] 
[2024-05-18 06:02:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 06:02:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 06:02:04] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 06:02:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 06:02:04] 
[2024-05-18 06:02:04] 2024-05-18 13:01:45,149 | INFO     | *************************************
[2024-05-18 06:02:04] 2024-05-18 13:01:45,652 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 06:02:04] 2024-05-18 13:01:45,676 | INFO     | sufficient remaining disk space (1898970087424 B)
[2024-05-18 06:02:04] 2024-05-18 13:01:45,676 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 06:02:04] 2024-05-18 13:01:45,677 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 06:02:04] 2024-05-18 13:01:45,677 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 06:02:04] 2024-05-18 13:01:45,677 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-18 06:02:04] 2024-05-18 13:01:45,678 | INFO     | aborting loop
[2024-05-18 06:02:04] 2024-05-18 13:01:45,678 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 06:02:04] 2024-05-18 13:01:45,678 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 06:02:04] 2024-05-18 13:01:45,678 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 06:02:04] 2024-05-18 13:01:45,852 | INFO     | all payload control threads have been joined
[2024-05-18 06:02:04] 2024-05-18 13:01:46,408 | INFO     | all data control threads have been joined
[2024-05-18 06:02:04] 2024-05-18 13:01:46,590 | INFO     | all job control threads have been joined
[2024-05-18 06:02:04] 2024-05-18 13:01:46,617 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 06:02:04] 2024-05-18 13:01:46,682 | INFO     | [job] retrieve thread has finished
[2024-05-18 06:02:04] 2024-05-18 13:01:46,684 | INFO     | [job] job monitor thread has finished
[2024-05-18 06:02:04] 2024-05-18 13:01:46,858 | INFO     | [payload] control thread has finished
[2024-05-18 06:02:04] 2024-05-18 13:01:47,179 | INFO     | [payload] failed_post thread has finished
[2024-05-18 06:02:04] 2024-05-18 13:01:47,180 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 06:02:04] 2024-05-18 13:01:47,410 | INFO     | [payload] validate_post thread has finished
[2024-05-18 06:02:04] 2024-05-18 13:01:47,412 | INFO     | [data] control thread has finished
[2024-05-18 06:02:04] 2024-05-18 13:01:47,591 | INFO     | [job] control thread has finished
[2024-05-18 06:02:04] 2024-05-18 13:01:47,602 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 06:02:04] 2024-05-18 13:01:47,756 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 06:02:04] 2024-05-18 13:01:47,926 | INFO     | [data] copytool_in thread has finished
[2024-05-18 06:02:04] 2024-05-18 13:01:48,109 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 06:02:04] 2024-05-18 13:01:48,112 | INFO     | [job] validate thread has finished
[2024-05-18 06:02:04] 2024-05-18 13:01:48,428 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 06:02:04] 2024-05-18 13:01:48,624 | INFO     | [data] copytool_out thread has finished
[2024-05-18 06:02:04] 2024-05-18 13:01:48,762 | INFO     | [job] queue monitor thread has finished
[2024-05-18 06:02:04] 2024-05-18 13:01:52,434 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 06:02:04] 2024-05-18 13:01:56,432 | INFO     | job.realtimelogging is not enabled
[2024-05-18 06:02:04] 2024-05-18 13:01:57,438 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 06:02:04] 2024-05-18 13:01:58,073 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139871278360384)>', '<ExcThread(monitor, started 139870777374464)>']
[2024-05-18 06:02:04] 2024-05-18 13:01:58,737 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 06:02:04] 2024-05-18 13:01:58,737 | INFO     | [monitor] control thread has ended
[2024-05-18 06:02:04] 2024-05-18 13:02:03,079 | INFO     | all workflow threads have been joined
[2024-05-18 06:02:04] 2024-05-18 13:02:03,079 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 06:02:04] 2024-05-18 13:02:03,079 | INFO     | traces error code: 0
[2024-05-18 06:02:04] 2024-05-18 13:02:03,080 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 06:02:04] 2024-05-18 13:02:03,174 [wrapper] ==== pilot stdout END ====
[2024-05-18 06:02:04] 2024-05-18 13:02:03,177 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 06:02:04] 2024-05-18 13:02:03,180 [wrapper] pilotpid: 80463
[2024-05-18 06:02:04] 2024-05-18 13:02:03,183 [wrapper] Pilot exit status: 0
[2024-05-18 06:02:04] 2024-05-18 13:02:03,193 [wrapper] pandaids: 6208280093
[2024-05-18 06:02:04] 2024-05-18 13:02:03,255 [wrapper] cleanup: SIGTERM to supervisor_pilot 238503 80464
[2024-05-18 06:02:04] 2024-05-18 13:02:03,259 [wrapper] Test setup, not cleaning
[2024-05-18 06:02:04] 2024-05-18 13:02:03,261 [wrapper] ==== wrapper stdout END ====
[2024-05-18 06:02:04] 2024-05-18 13:02:03,264 [wrapper] ==== wrapper stderr END ====
[2024-05-18 06:02:04] 2024-05-18 13:02:03,270 [wrapper] apfmon messages muted
[2024-05-18 06:02:04]  *** Error codes and diagnostics ***
[2024-05-18 06:02:04]     "exeErrorCode": 0,
[2024-05-18 06:02:04]     "exeErrorDiag": "",
[2024-05-18 06:02:04]     "pilotErrorCode": 0,
[2024-05-18 06:02:04]     "pilotErrorDiag": "",
[2024-05-18 06:02:04]  *** Listing of results directory ***
[2024-05-18 06:02:04] total 1429048
[2024-05-18 06:02:04] -rw-r--r-- 1 boinc boinc     467845 May 17 10:56 pilot3.tar.gz
[2024-05-18 06:02:04] -rwx------ 1 boinc boinc      32251 May 17 11:20 runpilot2-wrapper.sh
[2024-05-18 06:02:04] -rw-r--r-- 1 boinc boinc       5633 May 17 11:20 queuedata.json
[2024-05-18 06:02:04] -rw-r--r-- 1 boinc boinc        100 May 18 01:18 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 06:02:04] -rwxr-xr-x 1 boinc boinc       7986 May 18 01:18 run_atlas
[2024-05-18 06:02:04] -rw-r--r-- 1 boinc boinc        105 May 18 01:18 job.xml
[2024-05-18 06:02:04] -rw-r--r-- 1 boinc boinc       6627 May 18 01:18 init_data.xml
[2024-05-18 06:02:04] -rw-r--r-- 2 boinc boinc  328578876 May 18 01:18 EVNT.38734051._000313.pool.root.1
[2024-05-18 06:02:04] -rw-r--r-- 2 boinc boinc      17537 May 18 01:18 start_atlas.sh
[2024-05-18 06:02:04] drwxrwx--x 2 boinc boinc       4096 May 18 01:18 shared
[2024-05-18 06:02:04] -rw-r--r-- 2 boinc boinc     480158 May 18 01:18 input.tar.gz
[2024-05-18 06:02:04] -rw-r--r-- 1 boinc boinc          0 May 18 01:18 boinc_lockfile
[2024-05-18 06:02:04] -rw-r--r-- 1 boinc boinc       2853 May 18 01:18 pandaJob.out
[2024-05-18 06:02:04] -rw------- 1 boinc boinc        424 May 18 01:18 setup.sh.local
[2024-05-18 06:02:04] -rw------- 1 boinc boinc    1019073 May 18 01:18 agis_schedconf.cvmfs.json
[2024-05-18 06:02:04] -rw------- 1 boinc boinc    1324701 May 18 01:18 cric_ddmendpoints.json
[2024-05-18 06:02:04] drwx------ 4 boinc boinc       4096 May 18 01:18 pilot3
[2024-05-18 06:02:04] -rw-r--r-- 1 boinc boinc        532 May 18 05:51 boinc_task_state.xml
[2024-05-18 06:02:04] -rw------- 1 boinc boinc 1123205729 May 18 06:01 HITS.38734053._007770.pool.root.1
[2024-05-18 06:02:04] -rw------- 1 boinc boinc         95 May 18 06:01 pilot_heartbeat.json
[2024-05-18 06:02:04] -rw------- 1 boinc boinc       1075 May 18 06:01 memory_monitor_summary.json
[2024-05-18 06:02:04] -rw------- 1 boinc boinc          0 May 18 06:01 agis_ddmendpoints.agis.ALL.json
[2024-05-18 06:02:04] -rw------- 1 boinc boinc    2296278 May 18 06:01 log.38734053._007770.job.log.tgz.1
[2024-05-18 06:02:04] -rw------- 1 boinc boinc      28020 May 18 06:01 heartbeat.json
[2024-05-18 06:02:04] -rw-r--r-- 1 boinc boinc       8192 May 18 06:01 boinc_mmap_file
[2024-05-18 06:02:04] -rw-r--r-- 1 boinc boinc         29 May 18 06:01 wrapper_checkpoint.txt
[2024-05-18 06:02:04] -rw------- 1 boinc boinc       4405 May 18 06:02 pilotlog.txt
[2024-05-18 06:02:04] -rw------- 1 boinc boinc    1699317 May 18 06:02 log.38734053._007770.job.log.1
[2024-05-18 06:02:04] -rw------- 1 boinc boinc        353 May 18 06:02 output.list
[2024-05-18 06:02:04] -rw-r--r-- 1 boinc boinc        620 May 18 06:02 runtime_log
[2024-05-18 06:02:04] -rw------- 1 boinc boinc    4034560 May 18 06:02 result.tar.gz
[2024-05-18 06:02:04] -rw-r--r-- 1 boinc boinc      11287 May 18 06:02 runtime_log.err
[2024-05-18 06:02:04] -rw------- 1 boinc boinc        661 May 18 06:02 KisNDmfMHS5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmlPLKDmAppf9m.diag
[2024-05-18 06:02:04] -rw-r--r-- 1 boinc boinc      22142 May 18 06:02 stderr.txt
[2024-05-18 06:02:04] HITS file was successfully produced:
[2024-05-18 06:02:04] -rw------- 1 boinc boinc 1123205729 May 18 06:01 shared/HITS.pool.root.1
[2024-05-18 06:02:04]  *** Contents of shared directory: ***
[2024-05-18 06:02:04] total 1422200
[2024-05-18 06:02:04] -rw-r--r-- 2 boinc boinc  328578876 May 18 01:18 ATLAS.root_0
[2024-05-18 06:02:04] -rw-r--r-- 2 boinc boinc      17537 May 18 01:18 start_atlas.sh
[2024-05-18 06:02:04] -rw-r--r-- 2 boinc boinc     480158 May 18 01:18 input.tar.gz
[2024-05-18 06:02:04] -rw------- 1 boinc boinc 1123205729 May 18 06:01 HITS.pool.root.1
[2024-05-18 06:02:04] -rw------- 1 boinc boinc    4034560 May 18 06:02 result.tar.gz
06:02:05 (76206): run_atlas exited; CPU time 173210.474828
06:02:05 (76206): called boinc_finish(0)

</stderr_txt>
]]>

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