Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
01:42:19 (258116): wrapper (7.7.26015): starting
01:42:19 (258116): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 01:42:19] Arguments: --nthreads 12
[2024-05-18 01:42:19] Threads: 12
[2024-05-18 01:42:19] Checking for CVMFS
[2024-05-18 01:42:19] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 01:42:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 01:42:19] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 01:42:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 01:42:19] 2.9.2.0 9154 184693 172700 132872 3 310 36685606 45568000 14974 130560 0 1181662804 99.802 665949186 3764 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-05-18 01:42:19] CVMFS is ok
[2024-05-18 01:42:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 01:42:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 01:42:19] Further information can be found at the LHC@home message board.
[2024-05-18 01:42:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 01:42:19] Checking for apptainer binary...
[2024-05-18 01:42:19] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 01:42:19] Running /usr/bin/apptainer --version
[2024-05-18 01:42:19] apptainer version 1.1.8-1.el7
[2024-05-18 01:42:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 01:42:21] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0053.triumf.lcg
[2024-05-18 01:42:21] apptainer works
[2024-05-18 01:42:21] Set ATHENA_PROC_NUMBER=12
[2024-05-18 01:42:21] Set ATHENA_CORE_NUMBER=12
[2024-05-18 01:42:21] Starting ATLAS job with PandaID=6208213327
[2024-05-18 01:42:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 03:03:48]  *** The last 200 lines of the pilot log: ***
[2024-05-18 03:03:48]  mtime=0
[2024-05-18 03:03:48]  protocol_id=None
[2024-05-18 03:03:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-18 03:03:48]  replicas=None
[2024-05-18 03:03:48]  scope=mc23_13p6TeV
[2024-05-18 03:03:48]  status=None
[2024-05-18 03:03:48]  status_code=0
[2024-05-18 03:03:48]  storage_token=
[2024-05-18 03:03:48]  surl=/home/boinc/slots/0/PanDA_Pilot-6208213327/log.38776104._013717.job.log.tgz.1
[2024-05-18 03:03:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4e/70/log.38776104._013717.job.log.tgz.1
[2024-05-18 03:03:48]  workdir=None
[2024-05-18 03:03:48] ]
[2024-05-18 03:03:48] 2024-05-18 10:03:19,351 | INFO     | transferring file log.38776104._013717.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6208213327/log.38776104._013717.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-18 03:03:48] 2024-05-18 10:03:19,351 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6208213327/log.38776104._013717.job.log.tgz.1 /home/boinc/slots/0/log.38776104._013717.job.log.t
[2024-05-18 03:03:48] 2024-05-18 10:03:19,397 | INFO     | adding to output.list: log.38776104._013717.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4e/70/log.38776104._013717.job.log.tg
[2024-05-18 03:03:48] 2024-05-18 10:03:19,398 | INFO     | summary of transferred files:
[2024-05-18 03:03:48] 2024-05-18 10:03:19,398 | INFO     |  -- lfn=log.38776104._013717.job.log.tgz.1, status_code=0, status=transferred
[2024-05-18 03:03:48] 2024-05-18 10:03:19,398 | INFO     | stage-out finished correctly
[2024-05-18 03:03:48] 2024-05-18 10:03:20,930 | INFO     | monitor loop #267: job 0:6208213327 is in state 'finished'
[2024-05-18 03:03:48] 2024-05-18 10:03:20,930 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 03:03:48] 2024-05-18 10:03:21,443 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-18 03:03:48] 2024-05-18 10:03:21,904 | INFO     | job 6208213327 has state=finished
[2024-05-18 03:03:48] 2024-05-18 10:03:21,904 | INFO     | preparing for final server update for job 6208213327 in state='finished'
[2024-05-18 03:03:48] 2024-05-18 10:03:21,904 | INFO     | this job has now completed (state=finished)
[2024-05-18 03:03:48] 2024-05-18 10:03:21,904 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-18 03:03:48] 2024-05-18 10:03:21,904 | INFO     | job 6208213327 has finished - writing final server update
[2024-05-18 03:03:48] 2024-05-18 10:03:21,905 | INFO     | total number of processed events: 400 (read)
[2024-05-18 03:03:48] 2024-05-18 10:03:21,907 | INFO     | executing command: lscpu
[2024-05-18 03:03:48] 2024-05-18 10:03:21,962 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-18 03:03:48] 2024-05-18 10:03:21,962 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 03:03:48] 2024-05-18 10:03:22,020 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 03:03:48] 2024-05-18 10:03:23,433 | INFO     | monitor loop #268: job 0:6208213327 is in state 'finished'
[2024-05-18 03:03:48] 2024-05-18 10:03:23,434 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 03:03:48] 2024-05-18 10:03:25,937 | INFO     | monitor loop #269: job 0:6208213327 is in state 'finished'
[2024-05-18 03:03:48] 2024-05-18 10:03:25,937 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 03:03:48] 2024-05-18 10:03:28,443 | INFO     | monitor loop #270: job 0:6208213327 is in state 'finished'
[2024-05-18 03:03:48] 2024-05-18 10:03:28,443 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 03:03:48] 2024-05-18 10:03:30,946 | INFO     | monitor loop #271: job 0:6208213327 is in state 'finished'
[2024-05-18 03:03:48] 2024-05-18 10:03:30,946 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 03:03:48] 2024-05-18 10:03:32,798 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-18 03:03:48] 2024-05-18 10:03:32,798 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6208213327/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 03:03:48] 2024-05-18 10:03:32,799 | INFO     | extracted standard info from prmon json
[2024-05-18 03:03:48] 2024-05-18 10:03:32,799 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 03:03:48] 2024-05-18 10:03:32,799 | WARNING  | GPU info not found in prmon json
[2024-05-18 03:03:48] 2024-05-18 10:03:32,800 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 03:03:48] 2024-05-18 10:03:32,800 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 03:03:48] 2024-05-18 10:03:32,801 | INFO     | fitting pss+swap vs Time
[2024-05-18 03:03:48] 2024-05-18 10:03:32,801 | INFO     | model: linear, x: [1716022113.0, 1716022174.0, 1716022235.0, 1716022296.0, 1716022357.0, 1716022418.0, 1716022479.0, 1716022540.0, 1716022601.0, 1716022662.0, 1716
[2024-05-18 03:03:48] 2024-05-18 10:03:32,801 | INFO     | sum of square deviations: 115730632.31944431
[2024-05-18 03:03:48] 2024-05-18 10:03:32,801 | INFO     | sum of deviations: 20256904478.236115
[2024-05-18 03:03:48] 2024-05-18 10:03:32,801 | INFO     | mean x: 1716024278.6527777
[2024-05-18 03:03:48] 2024-05-18 10:03:32,801 | INFO     | mean y: 2627232.5694444445
[2024-05-18 03:03:48] 2024-05-18 10:03:32,802 | INFO     | -- intersect: -300361582297.14014
[2024-05-18 03:03:48] 2024-05-18 10:03:32,802 | INFO     | intersect: -300361582297.14014
[2024-05-18 03:03:48] 2024-05-18 10:03:32,802 | INFO     | chi2: 2.491865366419011
[2024-05-18 03:03:48] 2024-05-18 10:03:32,802 | INFO     | -- intersect: -300361582297.14014
[2024-05-18 03:03:48] 2024-05-18 10:03:32,802 | INFO     | current memory leak: 175.03 B/s (using 72 data points, chi2=2.49)
[2024-05-18 03:03:48] 2024-05-18 10:03:32,802 | INFO     | ..............................
[2024-05-18 03:03:48] 2024-05-18 10:03:32,802 | INFO     | . Timing measurements:
[2024-05-18 03:03:48] 2024-05-18 10:03:32,802 | INFO     | . get job = 0 s
[2024-05-18 03:03:48] 2024-05-18 10:03:32,802 | INFO     | . initial setup = 2 s
[2024-05-18 03:03:48] 2024-05-18 10:03:32,802 | INFO     | . payload setup = 10 s
[2024-05-18 03:03:48] 2024-05-18 10:03:32,802 | INFO     | . stage-in = 0 s
[2024-05-18 03:03:48] 2024-05-18 10:03:32,802 | INFO     | . payload execution = 4802 s
[2024-05-18 03:03:48] 2024-05-18 10:03:32,802 | INFO     | . stage-out = 0 s
[2024-05-18 03:03:48] 2024-05-18 10:03:32,802 | INFO     | . log creation = 0 s
[2024-05-18 03:03:48] 2024-05-18 10:03:32,802 | INFO     | ..............................
[2024-05-18 03:03:48] 2024-05-18 10:03:32,855 | INFO     | 
[2024-05-18 03:03:48] 2024-05-18 10:03:32,855 | INFO     | job summary report
[2024-05-18 03:03:48] 2024-05-18 10:03:32,855 | INFO     | --------------------------------------------------
[2024-05-18 03:03:48] 2024-05-18 10:03:32,855 | INFO     | PanDA job id: 6208213327
[2024-05-18 03:03:48] 2024-05-18 10:03:32,855 | INFO     | task id: 38776104
[2024-05-18 03:03:48] 2024-05-18 10:03:32,855 | INFO     | errors: (none)
[2024-05-18 03:03:48] 2024-05-18 10:03:32,856 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 03:03:48] 2024-05-18 10:03:32,856 | INFO     | pilot state: finished 
[2024-05-18 03:03:48] 2024-05-18 10:03:32,856 | INFO     | transexitcode: 0
[2024-05-18 03:03:48] 2024-05-18 10:03:32,856 | INFO     | exeerrorcode: 0
[2024-05-18 03:03:48] 2024-05-18 10:03:32,856 | INFO     | exeerrordiag: 
[2024-05-18 03:03:48] 2024-05-18 10:03:32,856 | INFO     | exitcode: 0
[2024-05-18 03:03:48] 2024-05-18 10:03:32,856 | INFO     | exitmsg: OK
[2024-05-18 03:03:48] 2024-05-18 10:03:32,856 | INFO     | cpuconsumptiontime: 28159 s
[2024-05-18 03:03:48] 2024-05-18 10:03:32,856 | INFO     | nevents: 400
[2024-05-18 03:03:48] 2024-05-18 10:03:32,856 | INFO     | neventsw: 0
[2024-05-18 03:03:48] 2024-05-18 10:03:32,856 | INFO     | pid: 270999
[2024-05-18 03:03:48] 2024-05-18 10:03:32,856 | INFO     | pgrp: 270999
[2024-05-18 03:03:48] 2024-05-18 10:03:32,856 | INFO     | corecount: 12
[2024-05-18 03:03:48] 2024-05-18 10:03:32,856 | INFO     | event service: False
[2024-05-18 03:03:48] 2024-05-18 10:03:32,856 | INFO     | sizes: {0: 2392204, 1: 2392204, 9: 2392438, 11: 2392466, 4817: 2418338, 4818: 2427292, 4820: 2427476, 4831: 2427646}
[2024-05-18 03:03:48] 2024-05-18 10:03:32,856 | INFO     | --------------------------------------------------
[2024-05-18 03:03:48] 2024-05-18 10:03:32,856 | INFO     | 
[2024-05-18 03:03:48] 2024-05-18 10:03:32,856 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 03:03:48] 2024-05-18 10:03:32,893 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 03:03:48] 2024-05-18 10:03:32,894 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 03:03:48] 2024-05-18 10:03:32,894 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 03:03:48] 2024-05-18 10:03:32,894 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 03:03:48] 2024-05-18 10:03:32,894 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 03:03:48] 2024-05-18 10:03:32,894 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 03:03:48] 2024-05-18 10:03:32,894 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 03:03:48] 2024-05-18 10:03:32,894 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 03:03:48] 2024-05-18 10:03:32,894 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 03:03:48] 2024-05-18 10:03:32,894 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 03:03:48] 2024-05-18 10:03:32,894 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 03:03:48] 2024-05-18 10:03:32,894 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 03:03:48] 2024-05-18 10:03:32,894 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 03:03:48] 2024-05-18 10:03:32,894 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 03:03:48] 2024-05-18 10:03:32,894 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 03:03:48] 2024-05-18 10:03:32,894 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 03:03:48] 2024-05-18 10:03:32,895 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 03:03:48] 2024-05-18 10:03:32,895 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 03:03:48] 2024-05-18 10:03:32,895 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 03:03:48] 2024-05-18 10:03:32,895 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 03:03:48] 2024-05-18 10:03:32,895 | INFO     | job 6208213327 has completed (purged errors)
[2024-05-18 03:03:48] 2024-05-18 10:03:32,895 | INFO     | overall cleanup function is called
[2024-05-18 03:03:48] 2024-05-18 10:03:33,902 | INFO     | --- collectZombieJob: --- 10, [270999]
[2024-05-18 03:03:48] 2024-05-18 10:03:33,902 | INFO     | zombie collector waiting for pid 270999
[2024-05-18 03:03:48] 2024-05-18 10:03:33,902 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 03:03:48] 2024-05-18 10:03:34,902 | INFO     | collected zombie processes
[2024-05-18 03:03:48] 2024-05-18 10:03:34,903 | INFO     | will now attempt to kill all subprocesses of pid=270999
[2024-05-18 03:03:48] 2024-05-18 10:03:35,097 | INFO     | process IDs to be killed: [270999] (in reverse order)
[2024-05-18 03:03:48] 2024-05-18 10:03:35,219 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 03:03:48] 2024-05-18 10:03:35,219 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 03:03:48] 2024-05-18 10:03:35,226 | INFO     | did not find any defunct processes belonging to 270999
[2024-05-18 03:03:48] 2024-05-18 10:03:35,233 | INFO     | did not find any defunct processes belonging to 270999
[2024-05-18 03:03:48] 2024-05-18 10:03:35,233 | INFO     | ready for new job
[2024-05-18 03:03:48] 2024-05-18 10:03:35,233 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 03:03:48] 2024-05-18 10:03:35,234 | INFO     | *************************************
[2024-05-18 03:03:48] 2024-05-18 10:03:35,234 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 03:03:48] 2024-05-18 10:03:35,234 | INFO     | *************************************
[2024-05-18 03:03:48] 2024-05-18 10:03:35,234 | INFO     | 
[2024-05-18 03:03:48] 2024-05-18 10:03:35,236 | INFO     | architecture information:
[2024-05-18 03:03:48] 2024-05-18 10:03:35,236 | INFO     | executing command: cat /etc/os-release
[2024-05-18 03:03:48] 2024-05-18 10:03:35,266 | INFO     | cat /etc/os-release:
[2024-05-18 03:03:48] NAME="CentOS Linux"
[2024-05-18 03:03:48] VERSION="7 (Core)"
[2024-05-18 03:03:48] ID="centos"
[2024-05-18 03:03:48] ID_LIKE="rhel fedora"
[2024-05-18 03:03:48] VERSION_ID="7"
[2024-05-18 03:03:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 03:03:48] ANSI_COLOR="0;31"
[2024-05-18 03:03:48] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 03:03:48] HOME_URL="https://www.centos.org/"
[2024-05-18 03:03:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 03:03:48] 
[2024-05-18 03:03:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 03:03:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 03:03:48] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 03:03:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 03:03:48] 
[2024-05-18 03:03:48] 2024-05-18 10:03:35,266 | INFO     | *************************************
[2024-05-18 03:03:48] 2024-05-18 10:03:35,769 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 03:03:48] 2024-05-18 10:03:35,805 | INFO     | sufficient remaining disk space (1943982309376 B)
[2024-05-18 03:03:48] 2024-05-18 10:03:35,805 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 03:03:48] 2024-05-18 10:03:35,805 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 03:03:48] 2024-05-18 10:03:35,805 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 03:03:48] 2024-05-18 10:03:35,806 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-18 03:03:48] 2024-05-18 10:03:35,806 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 03:03:48] 2024-05-18 10:03:35,806 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 03:03:48] 2024-05-18 10:03:35,806 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 03:03:48] 2024-05-18 10:03:35,956 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-18 03:03:48] 2024-05-18 10:03:35,956 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-18 03:03:48] 2024-05-18 10:03:35,956 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 03:03:48] 2024-05-18 10:03:35,956 | INFO     | will abort loop
[2024-05-18 03:03:48] 2024-05-18 10:03:36,105 | INFO     | all payload control threads have been joined
[2024-05-18 03:03:48] 2024-05-18 10:03:36,281 | INFO     | all data control threads have been joined
[2024-05-18 03:03:48] 2024-05-18 10:03:36,506 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 03:03:48] 2024-05-18 10:03:36,810 | INFO     | [job] retrieve thread has finished
[2024-05-18 03:03:48] 2024-05-18 10:03:36,942 | INFO     | [job] validate thread has finished
[2024-05-18 03:03:48] 2024-05-18 10:03:36,956 | INFO     | [data] copytool_in thread has finished
[2024-05-18 03:03:48] 2024-05-18 10:03:36,959 | INFO     | [job] job monitor thread has finished
[2024-05-18 03:03:48] 2024-05-18 10:03:36,981 | INFO     | [payload] failed_post thread has finished
[2024-05-18 03:03:48] 2024-05-18 10:03:36,982 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 03:03:48] 2024-05-18 10:03:37,074 | INFO     | all job control threads have been joined
[2024-05-18 03:03:48] 2024-05-18 10:03:37,110 | INFO     | [payload] control thread has finished
[2024-05-18 03:03:48] 2024-05-18 10:03:37,224 | INFO     | [payload] validate_post thread has finished
[2024-05-18 03:03:48] 2024-05-18 10:03:37,283 | INFO     | [data] control thread has finished
[2024-05-18 03:03:48] 2024-05-18 10:03:37,290 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 03:03:48] 2024-05-18 10:03:37,583 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 03:03:48] 2024-05-18 10:03:37,587 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 03:03:48] 2024-05-18 10:03:37,806 | INFO     | [data] copytool_out thread has finished
[2024-05-18 03:03:48] 2024-05-18 10:03:37,865 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 03:03:48] 2024-05-18 10:03:38,080 | INFO     | [job] control thread has finished
[2024-05-18 03:03:48] 2024-05-18 10:03:38,871 | INFO     | [job] queue monitor thread has finished
[2024-05-18 03:03:48] 2024-05-18 10:03:40,511 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 03:03:48] 2024-05-18 10:03:42,287 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140170681259840)>', '<ExcThread(monitor, started 140170250663680)>']
[2024-05-18 03:03:48] 2024-05-18 10:03:42,840 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 03:03:48] 2024-05-18 10:03:42,841 | INFO     | [monitor] control thread has ended
[2024-05-18 03:03:48] 2024-05-18 10:03:47,310 | INFO     | all workflow threads have been joined
[2024-05-18 03:03:48] 2024-05-18 10:03:47,310 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 03:03:48] 2024-05-18 10:03:47,311 | INFO     | traces error code: 0
[2024-05-18 03:03:48] 2024-05-18 10:03:47,311 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 03:03:48] 2024-05-18 10:03:47,420 [wrapper] ==== pilot stdout END ====
[2024-05-18 03:03:48] 2024-05-18 10:03:47,434 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 03:03:48] 2024-05-18 10:03:47,447 [wrapper] pilotpid: 262413
[2024-05-18 03:03:48] 2024-05-18 10:03:47,457 [wrapper] Pilot exit status: 0
[2024-05-18 03:03:48] 2024-05-18 10:03:47,569 [wrapper] pandaids: 6208213327
[2024-05-18 03:03:48] 2024-05-18 10:03:47,662 [wrapper] cleanup: SIGTERM to supervisor_pilot 161506 262414
[2024-05-18 03:03:48] 2024-05-18 10:03:47,676 [wrapper] Test setup, not cleaning
[2024-05-18 03:03:48] 2024-05-18 10:03:47,690 [wrapper] ==== wrapper stdout END ====
[2024-05-18 03:03:48] 2024-05-18 10:03:47,703 [wrapper] ==== wrapper stderr END ====
[2024-05-18 03:03:48] 2024-05-18 10:03:47,726 [wrapper] apfmon messages muted
[2024-05-18 03:03:48]  *** Error codes and diagnostics ***
[2024-05-18 03:03:48]     "exeErrorCode": 0,
[2024-05-18 03:03:48]     "exeErrorDiag": "",
[2024-05-18 03:03:48]     "pilotErrorCode": 0,
[2024-05-18 03:03:48]     "pilotErrorDiag": "",
[2024-05-18 03:03:48]  *** Listing of results directory ***
[2024-05-18 03:03:48] total 820876
[2024-05-18 03:03:48] -rw-r--r-- 1 boinc boinc    467845 May 17 10:45 pilot3.tar.gz
[2024-05-18 03:03:48] -rw-r--r-- 1 boinc boinc      5633 May 17 10:47 queuedata.json
[2024-05-18 03:03:48] -rwx------ 1 boinc boinc     32251 May 17 10:48 runpilot2-wrapper.sh
[2024-05-18 03:03:48] -rw-r--r-- 1 boinc boinc       100 May 18 01:42 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 03:03:48] -rwxr-xr-x 1 boinc boinc      7986 May 18 01:42 run_atlas
[2024-05-18 03:03:48] -rw-r--r-- 1 boinc boinc       105 May 18 01:42 job.xml
[2024-05-18 03:03:48] -rw-r--r-- 2 boinc boinc 604344390 May 18 01:42 EVNT.38776100._000476.pool.root.1
[2024-05-18 03:03:48] -rw-r--r-- 1 boinc boinc      6626 May 18 01:42 init_data.xml
[2024-05-18 03:03:48] drwxrwx--x 2 boinc boinc      4096 May 18 01:42 shared
[2024-05-18 03:03:48] -rw-r--r-- 2 boinc boinc    480009 May 18 01:42 input.tar.gz
[2024-05-18 03:03:48] -rw-r--r-- 2 boinc boinc     17537 May 18 01:42 start_atlas.sh
[2024-05-18 03:03:48] -rw-r--r-- 1 boinc boinc         0 May 18 01:42 boinc_lockfile
[2024-05-18 03:03:48] -rw-r--r-- 1 boinc boinc      2644 May 18 01:42 pandaJob.out
[2024-05-18 03:03:48] -rw------- 1 boinc boinc       424 May 18 01:42 setup.sh.local
[2024-05-18 03:03:48] -rw------- 1 boinc boinc   1019073 May 18 01:42 agis_schedconf.cvmfs.json
[2024-05-18 03:03:48] -rw------- 1 boinc boinc         0 May 18 01:42 agis_ddmendpoints.agis.ALL.json
[2024-05-18 03:03:48] -rw------- 1 boinc boinc   1324701 May 18 01:42 cric_ddmendpoints.json
[2024-05-18 03:03:48] drwx------ 4 boinc boinc      4096 May 18 01:42 pilot3
[2024-05-18 03:03:48] -rw------- 1 boinc boinc 231238981 May 18 03:02 HITS.38776104._013717.pool.root.1
[2024-05-18 03:03:48] -rw-r--r-- 1 boinc boinc       531 May 18 03:02 boinc_task_state.xml
[2024-05-18 03:03:48] -rw------- 1 boinc boinc        95 May 18 03:03 pilot_heartbeat.json
[2024-05-18 03:03:48] -rw------- 1 boinc boinc      1061 May 18 03:03 memory_monitor_summary.json
[2024-05-18 03:03:48] -rw------- 1 boinc boinc    360674 May 18 03:03 log.38776104._013717.job.log.tgz.1
[2024-05-18 03:03:48] -rw-r--r-- 1 boinc boinc      8192 May 18 03:03 boinc_mmap_file
[2024-05-18 03:03:48] -rw-r--r-- 1 boinc boinc        27 May 18 03:03 wrapper_checkpoint.txt
[2024-05-18 03:03:48] -rw------- 1 boinc boinc      7785 May 18 03:03 heartbeat.json
[2024-05-18 03:03:48] -rw------- 1 boinc boinc      4519 May 18 03:03 pilotlog.txt
[2024-05-18 03:03:48] -rw------- 1 boinc boinc    368214 May 18 03:03 log.38776104._013717.job.log.1
[2024-05-18 03:03:48] -rw------- 1 boinc boinc       357 May 18 03:03 output.list
[2024-05-18 03:03:48] -rw-r--r-- 1 boinc boinc       620 May 18 03:03 runtime_log
[2024-05-18 03:03:48] -rw------- 1 boinc boinc    747520 May 18 03:03 result.tar.gz
[2024-05-18 03:03:48] -rw------- 1 boinc boinc       658 May 18 03:03 VCmMDmirGS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmzMRKDmnnMsbn.diag
[2024-05-18 03:03:48] -rw-r--r-- 1 boinc boinc     11286 May 18 03:03 runtime_log.err
[2024-05-18 03:03:48] -rw-r--r-- 1 boinc boinc     22115 May 18 03:03 stderr.txt
[2024-05-18 03:03:48] HITS file was successfully produced:
[2024-05-18 03:03:48] -rw------- 1 boinc boinc 231238981 May 18 03:02 shared/HITS.pool.root.1
[2024-05-18 03:03:48]  *** Contents of shared directory: ***
[2024-05-18 03:03:48] total 817236
[2024-05-18 03:03:48] -rw-r--r-- 2 boinc boinc 604344390 May 18 01:42 ATLAS.root_0
[2024-05-18 03:03:48] -rw-r--r-- 2 boinc boinc    480009 May 18 01:42 input.tar.gz
[2024-05-18 03:03:48] -rw-r--r-- 2 boinc boinc     17537 May 18 01:42 start_atlas.sh
[2024-05-18 03:03:48] -rw------- 1 boinc boinc 231238981 May 18 03:02 HITS.pool.root.1
[2024-05-18 03:03:48] -rw------- 1 boinc boinc    747520 May 18 03:03 result.tar.gz
03:03:50 (258116): run_atlas exited; CPU time 27792.495798
03:03:50 (258116): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN