Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:12:58 (1282428): wrapper (7.7.26015): starting
20:12:58 (1282428): wrapper: running run_atlas (--nthreads 4)
[2024-05-19 20:12:58] Arguments: --nthreads 4
[2024-05-19 20:12:58] Threads: 4
[2024-05-19 20:12:58] Checking for CVMFS
[2024-05-19 20:12:58] No cvmfs_config command found, will try listing directly
[2024-05-19 20:12:58] CVMFS is ok
[2024-05-19 20:12:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 20:12:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 20:12:58] Further information can be found at the LHC@home message board.
[2024-05-19 20:12:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 20:12:58] Checking for apptainer binary...
[2024-05-19 20:12:58] which: no apptainer in ((null))
[2024-05-19 20:12:58] apptainer is not installed, using version from CVMFS
[2024-05-19 20:12:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 20:12:59] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2024-05-19 20:12:59] apptainer works
[2024-05-19 20:12:59] Set ATHENA_PROC_NUMBER=4
[2024-05-19 20:12:59] Set ATHENA_CORE_NUMBER=4
[2024-05-19 20:12:59] Starting ATLAS job with PandaID=6208208933
[2024-05-19 20:12:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 22:30:09]  *** The last 200 lines of the pilot log: ***
[2024-05-19 22:30:09] 2024-05-19 20:29:46,731 | INFO     | current chi2=4.257161818965599 (change=0.15071593905308944 %)
[2024-05-19 22:30:09] 2024-05-19 20:29:46,731 | INFO     | right removable region: 128
[2024-05-19 22:30:09] 2024-05-19 20:29:46,732 | INFO     | model: linear, x: [1716142718.0, 1716142779.0, 1716142840.0, 1716142901.0, 1716142962.0, 1716143023.0, 1716143084.0, 1716143145.0, 1716143206.0, 1716143267.0, 1716
[2024-05-19 22:30:09] 2024-05-19 20:29:46,732 | INFO     | sum of square deviations: 665612480.0
[2024-05-19 22:30:09] 2024-05-19 20:29:46,732 | INFO     | sum of deviations: 28995460620.000004
[2024-05-19 22:30:09] 2024-05-19 20:29:46,732 | INFO     | mean x: 1716146622.0
[2024-05-19 22:30:09] 2024-05-19 20:29:46,732 | INFO     | mean y: 2301207.3333333335
[2024-05-19 22:30:09] 2024-05-19 20:29:46,732 | INFO     | -- intersect: -74756606252.3751
[2024-05-19 22:30:09] 2024-05-19 20:29:46,733 | INFO     | intersect: -74756606252.3751
[2024-05-19 22:30:09] 2024-05-19 20:29:46,733 | INFO     | chi2: 1.6830990179643817
[2024-05-19 22:30:09] 2024-05-19 20:29:46,733 | INFO     | current chi2=1.6830990179643817 (change=60.523879736321504 %)
[2024-05-19 22:30:09] 2024-05-19 20:29:46,733 | INFO     | model: linear, x: [1716143023.0, 1716143084.0, 1716143145.0, 1716143206.0, 1716143267.0, 1716143328.0, 1716143389.0, 1716143450.0, 1716143511.0, 1716143572.0, 1716
[2024-05-19 22:30:09] 2024-05-19 20:29:46,733 | INFO     | sum of square deviations: 591173875.0
[2024-05-19 22:30:09] 2024-05-19 20:29:46,734 | INFO     | sum of deviations: 3501529929.9999995
[2024-05-19 22:30:09] 2024-05-19 20:29:46,734 | INFO     | mean x: 1716146774.5
[2024-05-19 22:30:09] 2024-05-19 20:29:46,734 | INFO     | mean y: 2353455.580645161
[2024-05-19 22:30:09] 2024-05-19 20:29:46,734 | INFO     | -- intersect: -10162404408.905012
[2024-05-19 22:30:09] 2024-05-19 20:29:46,734 | INFO     | intersect: -10162404408.905012
[2024-05-19 22:30:09] 2024-05-19 20:29:46,734 | INFO     | chi2: 0.05512496141275344
[2024-05-19 22:30:09] 2024-05-19 20:29:46,734 | INFO     | current chi2=0.05512496141275344 (change=96.72479391738793 %)
[2024-05-19 22:30:09] 2024-05-19 20:29:46,735 | INFO     | model: linear, x: [1716143328.0, 1716143389.0, 1716143450.0, 1716143511.0, 1716143572.0, 1716143633.0, 1716143694.0, 1716143755.0, 1716143816.0, 1716143877.0, 1716
[2024-05-19 22:30:09] 2024-05-19 20:29:46,735 | INFO     | sum of square deviations: 522502820.0
[2024-05-19 22:30:09] 2024-05-19 20:29:46,735 | INFO     | sum of deviations: 204454919.9999999
[2024-05-19 22:30:09] 2024-05-19 20:29:46,735 | INFO     | mean x: 1716146927.0
[2024-05-19 22:30:09] 2024-05-19 20:29:46,735 | INFO     | mean y: 2360629.5714285714
[2024-05-19 22:30:09] 2024-05-19 20:29:46,736 | INFO     | -- intersect: -669166239.2558645
[2024-05-19 22:30:09] 2024-05-19 20:29:46,736 | INFO     | intersect: -669166239.2558645
[2024-05-19 22:30:09] 2024-05-19 20:29:46,736 | INFO     | chi2: 0.0006023836311916922
[2024-05-19 22:30:09] 2024-05-19 20:29:46,736 | INFO     | current chi2=0.0006023836311916922 (change=98.90723981340996 %)
[2024-05-19 22:30:09] 2024-05-19 20:29:46,736 | INFO     | model: linear, x: [1716143633.0, 1716143694.0, 1716143755.0, 1716143816.0, 1716143877.0, 1716143938.0, 1716143999.0, 1716144060.0, 1716144121.0, 1716144182.0, 1716
[2024-05-19 22:30:09] 2024-05-19 20:29:46,736 | INFO     | sum of square deviations: 459366752.5
[2024-05-19 22:30:09] 2024-05-19 20:29:46,737 | INFO     | sum of deviations: -147062155.0
[2024-05-19 22:30:09] 2024-05-19 20:29:46,737 | INFO     | mean x: 1716147079.5
[2024-05-19 22:30:09] 2024-05-19 20:29:46,737 | INFO     | mean y: 2361471.8771929825
[2024-05-19 22:30:09] 2024-05-19 20:29:46,737 | INFO     | -- intersect: 551770601.8037789
[2024-05-19 22:30:09] 2024-05-19 20:29:46,737 | INFO     | intersect: 551770601.8037789
[2024-05-19 22:30:09] 2024-05-19 20:29:46,737 | INFO     | chi2: 0.0002103249083508068
[2024-05-19 22:30:09] 2024-05-19 20:29:46,737 | INFO     | current chi2=0.0002103249083508068 (change=65.08455783655306 %)
[2024-05-19 22:30:09] 2024-05-19 20:29:46,738 | INFO     | model: linear, x: [1716143938.0, 1716143999.0, 1716144060.0, 1716144121.0, 1716144182.0, 1716144243.0, 1716144304.0, 1716144365.0, 1716144426.0, 1716144487.0, 1716
[2024-05-19 22:30:09] 2024-05-19 20:29:46,738 | INFO     | sum of square deviations: 401533110.0
[2024-05-19 22:30:09] 2024-05-19 20:29:46,738 | INFO     | sum of deviations: -171286963.0
[2024-05-19 22:30:09] 2024-05-19 20:29:46,738 | INFO     | mean x: 1716147232.0
[2024-05-19 22:30:09] 2024-05-19 20:29:46,738 | INFO     | mean y: 2361534.1559633026
[2024-05-19 22:30:09] 2024-05-19 20:29:46,738 | INFO     | -- intersect: 734439761.6031007
[2024-05-19 22:30:09] 2024-05-19 20:29:46,739 | INFO     | intersect: 734439761.6031007
[2024-05-19 22:30:09] 2024-05-19 20:29:46,739 | INFO     | chi2: 0.000201522856264371
[2024-05-19 22:30:09] 2024-05-19 20:29:46,739 | INFO     | current chi2=0.000201522856264371 (change=4.184978448560461 %)
[2024-05-19 22:30:09] 2024-05-19 20:29:46,739 | INFO     | left removable region: 50
[2024-05-19 22:30:09] 2024-05-19 20:29:46,739 | INFO     | model: linear, x: [1716145463.0, 1716145524.0, 1716145585.0, 1716145646.0, 1716145707.0, 1716145768.0, 1716145829.0, 1716145890.0, 1716145951.0, 1716146012.0, 1716
[2024-05-19 22:30:09] 2024-05-19 20:29:46,739 | INFO     | sum of square deviations: 147126479.5
[2024-05-19 22:30:09] 2024-05-19 20:29:46,739 | INFO     | sum of deviations: -33211480.499999993
[2024-05-19 22:30:09] 2024-05-19 20:29:46,740 | INFO     | mean x: 1716147811.5
[2024-05-19 22:30:09] 2024-05-19 20:29:46,740 | INFO     | mean y: 2360257.3205128205
[2024-05-19 22:30:09] 2024-05-19 20:29:46,740 | INFO     | -- intersect: 389753538.0572405
[2024-05-19 22:30:09] 2024-05-19 20:29:46,740 | INFO     | intersect: 389753538.0572405
[2024-05-19 22:30:09] 2024-05-19 20:29:46,740 | INFO     | chi2: 0.00010398956447293246
[2024-05-19 22:30:09] 2024-05-19 20:29:46,740 | INFO     | -- intersect: 389753538.0572405
[2024-05-19 22:30:09] 2024-05-19 20:29:46,740 | INFO     | current memory leak: -0.23 B/s (using 78 data points, chi2=0.00)
[2024-05-19 22:30:09] 2024-05-19 20:29:46,741 | INFO     | ..............................
[2024-05-19 22:30:09] 2024-05-19 20:29:46,741 | INFO     | . Timing measurements:
[2024-05-19 22:30:09] 2024-05-19 20:29:46,741 | INFO     | . get job = 0 s
[2024-05-19 22:30:09] 2024-05-19 20:29:46,741 | INFO     | . initial setup = 1 s
[2024-05-19 22:30:09] 2024-05-19 20:29:46,741 | INFO     | . payload setup = 5 s
[2024-05-19 22:30:09] 2024-05-19 20:29:46,741 | INFO     | . stage-in = 0 s
[2024-05-19 22:30:09] 2024-05-19 20:29:46,741 | INFO     | . payload execution = 8167 s
[2024-05-19 22:30:09] 2024-05-19 20:29:46,741 | INFO     | . stage-out = 0 s
[2024-05-19 22:30:09] 2024-05-19 20:29:46,741 | INFO     | . log creation = 0 s
[2024-05-19 22:30:09] 2024-05-19 20:29:46,741 | INFO     | ..............................
[2024-05-19 22:30:09] 2024-05-19 20:29:47,159 | INFO     | 
[2024-05-19 22:30:09] 2024-05-19 20:29:47,159 | INFO     | job summary report
[2024-05-19 22:30:09] 2024-05-19 20:29:47,159 | INFO     | --------------------------------------------------
[2024-05-19 22:30:09] 2024-05-19 20:29:47,159 | INFO     | PanDA job id: 6208208933
[2024-05-19 22:30:09] 2024-05-19 20:29:47,159 | INFO     | task id: 38776104
[2024-05-19 22:30:09] 2024-05-19 20:29:47,159 | INFO     | errors: (none)
[2024-05-19 22:30:09] 2024-05-19 20:29:47,159 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 22:30:09] 2024-05-19 20:29:47,159 | INFO     | pilot state: finished 
[2024-05-19 22:30:09] 2024-05-19 20:29:47,159 | INFO     | transexitcode: 0
[2024-05-19 22:30:09] 2024-05-19 20:29:47,160 | INFO     | exeerrorcode: 0
[2024-05-19 22:30:09] 2024-05-19 20:29:47,160 | INFO     | exeerrordiag: 
[2024-05-19 22:30:09] 2024-05-19 20:29:47,160 | INFO     | exitcode: 0
[2024-05-19 22:30:09] 2024-05-19 20:29:47,160 | INFO     | exitmsg: OK
[2024-05-19 22:30:09] 2024-05-19 20:29:47,160 | INFO     | cpuconsumptiontime: 30088 s
[2024-05-19 22:30:09] 2024-05-19 20:29:47,160 | INFO     | nevents: 400
[2024-05-19 22:30:09] 2024-05-19 20:29:47,160 | INFO     | neventsw: 0
[2024-05-19 22:30:09] 2024-05-19 20:29:47,160 | INFO     | pid: 1295215
[2024-05-19 22:30:09] 2024-05-19 20:29:47,160 | INFO     | pgrp: 1295215
[2024-05-19 22:30:09] 2024-05-19 20:29:47,160 | INFO     | corecount: 4
[2024-05-19 22:30:09] 2024-05-19 20:29:47,160 | INFO     | event service: False
[2024-05-19 22:30:09] 2024-05-19 20:29:47,160 | INFO     | sizes: {0: 2392265, 1: 2392265, 4: 2392499, 11: 2392527, 8176: 2420285, 8177: 2429269, 8180: 2429453, 8184: 2429623}
[2024-05-19 22:30:09] 2024-05-19 20:29:47,160 | INFO     | --------------------------------------------------
[2024-05-19 22:30:09] 2024-05-19 20:29:47,160 | INFO     | 
[2024-05-19 22:30:09] 2024-05-19 20:29:47,160 | INFO     | executing command: ls -lF /scratch/boinc/var/slot128/slots/0
[2024-05-19 22:30:09] 2024-05-19 20:29:47,181 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 22:30:09] 2024-05-19 20:29:47,181 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 22:30:09] 2024-05-19 20:29:47,181 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 22:30:09] 2024-05-19 20:29:47,181 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 22:30:09] 2024-05-19 20:29:47,181 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 22:30:09] 2024-05-19 20:29:47,181 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 22:30:09] 2024-05-19 20:29:47,181 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 22:30:09] 2024-05-19 20:29:47,181 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 22:30:09] 2024-05-19 20:29:47,181 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 22:30:09] 2024-05-19 20:29:47,181 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 22:30:09] 2024-05-19 20:29:47,181 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 22:30:09] 2024-05-19 20:29:47,181 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 22:30:09] 2024-05-19 20:29:47,181 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 22:30:09] 2024-05-19 20:29:47,181 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 22:30:09] 2024-05-19 20:29:47,181 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 22:30:09] 2024-05-19 20:29:47,181 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 22:30:09] 2024-05-19 20:29:47,182 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 22:30:09] 2024-05-19 20:29:47,182 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 22:30:09] 2024-05-19 20:29:47,182 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 22:30:09] 2024-05-19 20:29:47,182 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 22:30:09] 2024-05-19 20:29:47,182 | INFO     | job 6208208933 has completed (purged errors)
[2024-05-19 22:30:09] 2024-05-19 20:29:47,182 | INFO     | overall cleanup function is called
[2024-05-19 22:30:09] 2024-05-19 20:29:48,189 | INFO     | --- collectZombieJob: --- 10, [1295215]
[2024-05-19 22:30:09] 2024-05-19 20:29:48,189 | INFO     | zombie collector waiting for pid 1295215
[2024-05-19 22:30:09] 2024-05-19 20:29:48,189 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 22:30:09] 2024-05-19 20:29:49,194 | INFO     | collected zombie processes
[2024-05-19 22:30:09] 2024-05-19 20:29:49,194 | INFO     | will now attempt to kill all subprocesses of pid=1295215
[2024-05-19 22:30:09] 2024-05-19 20:29:49,403 | INFO     | process IDs to be killed: [1295215] (in reverse order)
[2024-05-19 22:30:09] 2024-05-19 20:29:49,546 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 22:30:09] 2024-05-19 20:29:49,546 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 22:30:09] 2024-05-19 20:29:49,562 | INFO     | did not find any defunct processes belonging to 1295215
[2024-05-19 22:30:09] 2024-05-19 20:29:49,572 | INFO     | did not find any defunct processes belonging to 1295215
[2024-05-19 22:30:09] 2024-05-19 20:29:49,572 | INFO     | ready for new job
[2024-05-19 22:30:09] 2024-05-19 20:29:49,572 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 22:30:09] 2024-05-19 20:29:49,574 | INFO     | *************************************
[2024-05-19 22:30:09] 2024-05-19 20:29:49,574 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 22:30:09] 2024-05-19 20:29:49,574 | INFO     | *************************************
[2024-05-19 22:30:09] 2024-05-19 20:29:49,574 | INFO     | 
[2024-05-19 22:30:09] 2024-05-19 20:29:49,578 | INFO     | architecture information:
[2024-05-19 22:30:09] 2024-05-19 20:29:49,578 | INFO     | executing command: cat /etc/os-release
[2024-05-19 22:30:09] 2024-05-19 20:29:49,598 | INFO     | cat /etc/os-release:
[2024-05-19 22:30:09] NAME="CentOS Linux"
[2024-05-19 22:30:09] VERSION="7 (Core)"
[2024-05-19 22:30:09] ID="centos"
[2024-05-19 22:30:09] ID_LIKE="rhel fedora"
[2024-05-19 22:30:09] VERSION_ID="7"
[2024-05-19 22:30:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 22:30:09] ANSI_COLOR="0;31"
[2024-05-19 22:30:09] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 22:30:09] HOME_URL="https://www.centos.org/"
[2024-05-19 22:30:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 22:30:09] 
[2024-05-19 22:30:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 22:30:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 22:30:09] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 22:30:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 22:30:09] 
[2024-05-19 22:30:09] 2024-05-19 20:29:49,598 | INFO     | *************************************
[2024-05-19 22:30:09] 2024-05-19 20:29:50,100 | INFO     | executing command: df -mP /scratch/boinc/var/slot128/slots/0
[2024-05-19 22:30:09] 2024-05-19 20:29:50,117 | INFO     | sufficient remaining disk space (3007787827200 B)
[2024-05-19 22:30:09] 2024-05-19 20:29:50,118 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 22:30:09] 2024-05-19 20:29:50,118 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 22:30:09] 2024-05-19 20:29:50,118 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-19 22:30:09] 2024-05-19 20:29:50,118 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 22:30:09] 2024-05-19 20:29:50,119 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 22:30:09] 2024-05-19 20:29:50,119 | INFO     | aborting loop
[2024-05-19 22:30:09] 2024-05-19 20:29:50,119 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 22:30:09] 2024-05-19 20:29:50,120 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 22:30:09] 2024-05-19 20:29:50,227 | INFO     | all job control threads have been joined
[2024-05-19 22:30:09] 2024-05-19 20:29:50,299 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 22:30:09] 2024-05-19 20:29:51,021 | INFO     | all data control threads have been joined
[2024-05-19 22:30:09] 2024-05-19 20:29:51,123 | INFO     | [job] retrieve thread has finished
[2024-05-19 22:30:09] 2024-05-19 20:29:51,125 | INFO     | [job] job monitor thread has finished
[2024-05-19 22:30:09] 2024-05-19 20:29:51,233 | INFO     | [job] control thread has finished
[2024-05-19 22:30:09] 2024-05-19 20:29:51,280 | INFO     | [job] validate thread has finished
[2024-05-19 22:30:09] 2024-05-19 20:29:51,389 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 22:30:09] 2024-05-19 20:29:51,429 | INFO     | all payload control threads have been joined
[2024-05-19 22:30:09] 2024-05-19 20:29:51,714 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 22:30:09] 2024-05-19 20:29:51,803 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 22:30:09] 2024-05-19 20:29:51,816 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 22:30:09] 2024-05-19 20:29:51,849 | INFO     | [payload] failed_post thread has finished
[2024-05-19 22:30:09] 2024-05-19 20:29:52,026 | INFO     | [data] control thread has finished
[2024-05-19 22:30:09] 2024-05-19 20:29:52,304 | INFO     | [data] copytool_out thread has finished
[2024-05-19 22:30:09] 2024-05-19 20:29:52,434 | INFO     | [payload] control thread has finished
[2024-05-19 22:30:09] 2024-05-19 20:29:52,441 | INFO     | [data] copytool_in thread has finished
[2024-05-19 22:30:09] 2024-05-19 20:29:52,676 | INFO     | [payload] validate_post thread has finished
[2024-05-19 22:30:09] 2024-05-19 20:29:52,821 | INFO     | [job] queue monitor thread has finished
[2024-05-19 22:30:09] 2024-05-19 20:29:53,243 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 22:30:09] 2024-05-19 20:29:57,249 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 22:30:09] 2024-05-19 20:30:00,868 | INFO     | job.realtimelogging is not enabled
[2024-05-19 22:30:09] 2024-05-19 20:30:01,873 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 22:30:09] 2024-05-19 20:30:03,086 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47087100683328)>', '<ExcThread(monitor, started 47087681025792)>']
[2024-05-19 22:30:09] 2024-05-19 20:30:03,185 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 22:30:09] 2024-05-19 20:30:03,185 | INFO     | [monitor] control thread has ended
[2024-05-19 22:30:09] 2024-05-19 20:30:08,111 | INFO     | all workflow threads have been joined
[2024-05-19 22:30:09] 2024-05-19 20:30:08,111 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 22:30:09] 2024-05-19 20:30:08,111 | INFO     | traces error code: 0
[2024-05-19 22:30:09] 2024-05-19 20:30:08,111 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 22:30:09] 2024-05-19 20:30:08,190 [wrapper] ==== pilot stdout END ====
[2024-05-19 22:30:09] 2024-05-19 20:30:08,194 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 22:30:09] 2024-05-19 20:30:08,196 [wrapper] pilotpid: 1287278
[2024-05-19 22:30:09] 2024-05-19 20:30:08,198 [wrapper] Pilot exit status: 0
[2024-05-19 22:30:09] 2024-05-19 20:30:08,208 [wrapper] pandaids: 6208208933
[2024-05-19 22:30:09] 2024-05-19 20:30:08,304 [wrapper] cleanup: SIGTERM to supervisor_pilot 1983466 1287279
[2024-05-19 22:30:09] 2024-05-19 20:30:08,307 [wrapper] Test setup, not cleaning
[2024-05-19 22:30:09] 2024-05-19 20:30:08,308 [wrapper] ==== wrapper stdout END ====
[2024-05-19 22:30:09] 2024-05-19 20:30:08,310 [wrapper] ==== wrapper stderr END ====
[2024-05-19 22:30:09] 2024-05-19 20:30:08,313 [wrapper] apfmon messages muted
[2024-05-19 22:30:09]  *** Error codes and diagnostics ***
[2024-05-19 22:30:09]     "exeErrorCode": 0,
[2024-05-19 22:30:09]     "exeErrorDiag": "",
[2024-05-19 22:30:09]     "pilotErrorCode": 0,
[2024-05-19 22:30:09]     "pilotErrorDiag": "",
[2024-05-19 22:30:09]  *** Listing of results directory ***
[2024-05-19 22:30:09] total 814276
[2024-05-19 22:30:09] -rw-r--r-- 1 boinc boinc    467845 May 17 19:32 pilot3.tar.gz
[2024-05-19 22:30:09] -rw-r--r-- 1 boinc boinc      5633 May 17 19:35 queuedata.json
[2024-05-19 22:30:09] -rwx------ 1 boinc boinc     32251 May 17 19:36 runpilot2-wrapper.sh
[2024-05-19 22:30:09] -rw-r--r-- 1 boinc boinc       100 May 19 20:12 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 22:30:09] -rwxr-xr-x 1 boinc boinc      7986 May 19 20:12 run_atlas
[2024-05-19 22:30:09] -rw-r--r-- 1 boinc boinc       105 May 19 20:12 job.xml
[2024-05-19 22:30:09] -rw-r--r-- 2 boinc boinc     17537 May 19 20:12 start_atlas.sh
[2024-05-19 22:30:09] drwxrwx--x 2 boinc boinc      4096 May 19 20:12 shared
[2024-05-19 22:30:09] -rw-r--r-- 2 boinc boinc    480012 May 19 20:12 input.tar.gz
[2024-05-19 22:30:09] -rw-r--r-- 1 boinc boinc      6646 May 19 20:12 init_data.xml
[2024-05-19 22:30:09] -rw-r--r-- 2 boinc boinc 600762518 May 19 20:12 EVNT.38776100._000181.pool.root.1
[2024-05-19 22:30:09] -rw-r--r-- 1 boinc boinc         0 May 19 20:12 boinc_lockfile
[2024-05-19 22:30:09] -rw-r--r-- 1 boinc boinc      2642 May 19 20:12 pandaJob.out
[2024-05-19 22:30:09] -rw------- 1 boinc boinc       424 May 19 20:12 setup.sh.local
[2024-05-19 22:30:09] -rw------- 1 boinc boinc   1014061 May 19 20:13 agis_schedconf.cvmfs.json
[2024-05-19 22:30:09] -rw------- 1 boinc boinc         0 May 19 20:13 agis_ddmendpoints.agis.ALL.json
[2024-05-19 22:30:09] -rw------- 1 boinc boinc   1324701 May 19 20:13 cric_ddmendpoints.json
[2024-05-19 22:30:09] drwx------ 4 boinc boinc      4096 May 19 20:13 pilot3
[2024-05-19 22:30:09] -rw------- 1 boinc boinc 227289142 May 19 22:29 HITS.38776104._013619.pool.root.1
[2024-05-19 22:30:09] -rw-r--r-- 1 boinc boinc       530 May 19 22:29 boinc_task_state.xml
[2024-05-19 22:30:09] -rw------- 1 boinc boinc        95 May 19 22:29 pilot_heartbeat.json
[2024-05-19 22:30:09] -rw------- 1 boinc boinc      1039 May 19 22:29 memory_monitor_summary.json
[2024-05-19 22:30:09] -rw------- 1 boinc boinc    267460 May 19 22:29 log.38776104._013619.job.log.tgz.1
[2024-05-19 22:30:09] -rw------- 1 boinc boinc      7709 May 19 22:29 heartbeat.json
[2024-05-19 22:30:09] -rw-r--r-- 1 boinc boinc        27 May 19 22:29 wrapper_checkpoint.txt
[2024-05-19 22:30:09] -rw-r--r-- 1 boinc boinc      8192 May 19 22:29 boinc_mmap_file
[2024-05-19 22:30:09] -rw------- 1 boinc boinc      4418 May 19 22:30 pilotlog.txt
[2024-05-19 22:30:09] -rw------- 1 boinc boinc    851191 May 19 22:30 log.38776104._013619.job.log.1
[2024-05-19 22:30:09] -rw------- 1 boinc boinc       357 May 19 22:30 output.list
[2024-05-19 22:30:09] -rw-r--r-- 1 boinc boinc       620 May 19 22:30 runtime_log
[2024-05-19 22:30:09] -rw------- 1 boinc boinc   1136640 May 19 22:30 result.tar.gz
[2024-05-19 22:30:09] -rw-r--r-- 1 boinc boinc     11428 May 19 22:30 runtime_log.err
[2024-05-19 22:30:09] -rw------- 1 boinc boinc       655 May 19 22:30 S7iMDmZgGS5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmyNLKDmZxExVm.diag
[2024-05-19 22:30:09] -rw-r--r-- 1 boinc boinc     21404 May 19 22:30 stderr.txt
[2024-05-19 22:30:09] HITS file was successfully produced:
[2024-05-19 22:30:09] -rw------- 1 boinc boinc 227289142 May 19 22:29 shared/HITS.pool.root.1
[2024-05-19 22:30:09]  *** Contents of shared directory: ***
[2024-05-19 22:30:09] total 810260
[2024-05-19 22:30:09] -rw-r--r-- 2 boinc boinc     17537 May 19 20:12 start_atlas.sh
[2024-05-19 22:30:09] -rw-r--r-- 2 boinc boinc    480012 May 19 20:12 input.tar.gz
[2024-05-19 22:30:09] -rw-r--r-- 2 boinc boinc 600762518 May 19 20:12 ATLAS.root_0
[2024-05-19 22:30:09] -rw------- 1 boinc boinc 227289142 May 19 22:29 HITS.pool.root.1
[2024-05-19 22:30:09] -rw------- 1 boinc boinc   1136640 May 19 22:30 result.tar.gz
22:30:10 (1282428): run_atlas exited; CPU time 29906.390243
22:30:10 (1282428): called boinc_finish(0)

</stderr_txt>
]]>

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