Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
15:33:47 (45888): wrapper (7.7.26015): starting
15:33:47 (45888): wrapper: running run_atlas (--nthreads 12)
[2024-05-17 15:33:47] Arguments: --nthreads 12
[2024-05-17 15:33:47] Threads: 12
[2024-05-17 15:33:47] Checking for CVMFS
[2024-05-17 15:33:47] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 15:33:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 15:33:47] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 15:33:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 15:33:48] 2.10.1.0 121685 184081 188924 132857 3 183 25063147 45568001 16636 130560 0 1099495981 99.769 668104442 17978 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-05-17 15:33:48] CVMFS is ok
[2024-05-17 15:33:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 15:33:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 15:33:48] Further information can be found at the LHC@home message board.
[2024-05-17 15:33:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 15:33:48] Checking for apptainer binary...
[2024-05-17 15:33:48] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 15:33:48] Running /usr/bin/apptainer --version
[2024-05-17 15:33:48] apptainer version 1.1.8-1.el7
[2024-05-17 15:33:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 15:33:49] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0167.triumf.lcg
[2024-05-17 15:33:49] apptainer works
[2024-05-17 15:33:49] Set ATHENA_PROC_NUMBER=12
[2024-05-17 15:33:49] Set ATHENA_CORE_NUMBER=12
[2024-05-17 15:33:49] Starting ATLAS job with PandaID=6208167311
[2024-05-17 15:33:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 16:51:06]  *** The last 200 lines of the pilot log: ***
[2024-05-17 16:51:06]  filetype=log
[2024-05-17 16:51:06]  guid=75e514a9-55e6-49d1-b045-d596c06c97d4
[2024-05-17 16:51:06]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-17 16:51:06]  is_tar=False
[2024-05-17 16:51:06]  lfn=log.38776125._014959.job.log.tgz.1
[2024-05-17 16:51:06]  mtime=0
[2024-05-17 16:51:06]  protocol_id=None
[2024-05-17 16:51:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-17 16:51:06]  replicas=None
[2024-05-17 16:51:06]  scope=mc23_13p6TeV
[2024-05-17 16:51:06]  status=None
[2024-05-17 16:51:06]  status_code=0
[2024-05-17 16:51:06]  storage_token=
[2024-05-17 16:51:06]  surl=/home/boinc/slots/0/PanDA_Pilot-6208167311/log.38776125._014959.job.log.tgz.1
[2024-05-17 16:51:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/96/13/log.38776125._014959.job.log.tgz.1
[2024-05-17 16:51:06]  workdir=None
[2024-05-17 16:51:06] ]
[2024-05-17 16:51:06] 2024-05-17 23:50:43,063 | INFO     | transferring file log.38776125._014959.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6208167311/log.38776125._014959.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-17 16:51:06] 2024-05-17 23:50:43,063 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6208167311/log.38776125._014959.job.log.tgz.1 /home/boinc/slots/0/log.38776125._014959.job.log.t
[2024-05-17 16:51:06] 2024-05-17 23:50:43,091 | INFO     | adding to output.list: log.38776125._014959.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/96/13/log.38776125._014959.job.log.tg
[2024-05-17 16:51:06] 2024-05-17 23:50:43,092 | INFO     | summary of transferred files:
[2024-05-17 16:51:06] 2024-05-17 23:50:43,092 | INFO     |  -- lfn=log.38776125._014959.job.log.tgz.1, status_code=0, status=transferred
[2024-05-17 16:51:06] 2024-05-17 23:50:43,093 | INFO     | stage-out finished correctly
[2024-05-17 16:51:06] 2024-05-17 23:50:43,516 | WARNING  | process 56800 is no longer using CPU - aborting
[2024-05-17 16:51:06] 2024-05-17 23:50:43,517 | INFO     | will not send any job update
[2024-05-17 16:51:06] 2024-05-17 23:50:44,120 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-17 16:51:06] 2024-05-17 23:50:45,059 | INFO     | job 6208167311 has state=finished
[2024-05-17 16:51:06] 2024-05-17 23:50:45,059 | INFO     | preparing for final server update for job 6208167311 in state='finished'
[2024-05-17 16:51:06] 2024-05-17 23:50:45,364 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2024-05-17 16:51:06] 2024-05-17 23:50:45,365 | INFO     | this job has now completed (state=finished)
[2024-05-17 16:51:06] 2024-05-17 23:50:45,365 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-17 16:51:06] 2024-05-17 23:50:45,365 | INFO     | job 6208167311 has finished - writing final server update
[2024-05-17 16:51:06] 2024-05-17 23:50:45,366 | INFO     | total number of processed events: 400 (read)
[2024-05-17 16:51:06] 2024-05-17 23:50:45,372 | INFO     | executing command: lscpu
[2024-05-17 16:51:06] 2024-05-17 23:50:45,420 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-17 16:51:06] 2024-05-17 23:50:45,420 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-17 16:51:06] 2024-05-17 23:50:45,469 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-17 16:51:06] 2024-05-17 23:50:46,020 | INFO     | monitor loop #351: job 0:6208167311 is in state 'finished'
[2024-05-17 16:51:06] 2024-05-17 23:50:46,020 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 16:51:06] 2024-05-17 23:50:48,524 | INFO     | monitor loop #352: job 0:6208167311 is in state 'finished'
[2024-05-17 16:51:06] 2024-05-17 23:50:48,524 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 16:51:06] 2024-05-17 23:50:51,002 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-17 16:51:06] 2024-05-17 23:50:51,003 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6208167311/memory_monitor_summary.json (trf name=prmon)
[2024-05-17 16:51:06] 2024-05-17 23:50:51,005 | INFO     | extracted standard info from prmon json
[2024-05-17 16:51:06] 2024-05-17 23:50:51,005 | INFO     | extracted standard memory fields from prmon json
[2024-05-17 16:51:06] 2024-05-17 23:50:51,005 | WARNING  | GPU info not found in prmon json
[2024-05-17 16:51:06] 2024-05-17 23:50:51,006 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-17 16:51:06] 2024-05-17 23:50:51,006 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 16:51:06] 2024-05-17 23:50:51,008 | INFO     | fitting pss+swap vs Time
[2024-05-17 16:51:06] 2024-05-17 23:50:51,009 | INFO     | model: linear, x: [1715985580.0, 1715985641.0, 1715985702.0, 1715985763.0, 1715985824.0, 1715985885.0, 1715985946.0, 1715986007.0, 1715986068.0, 1715986129.0, 1715
[2024-05-17 16:51:06] 2024-05-17 23:50:51,009 | INFO     | sum of square deviations: 97479037.0
[2024-05-17 16:51:06] 2024-05-17 23:50:51,010 | INFO     | sum of deviations: 21877530592.5
[2024-05-17 16:51:06] 2024-05-17 23:50:51,010 | INFO     | mean x: 1715987623.5
[2024-05-17 16:51:06] 2024-05-17 23:50:51,010 | INFO     | mean y: 2563322.4264705884
[2024-05-17 16:51:06] 2024-05-17 23:50:51,010 | INFO     | -- intersect: -385122001761.9888
[2024-05-17 16:51:06] 2024-05-17 23:50:51,010 | INFO     | intersect: -385122001761.9888
[2024-05-17 16:51:06] 2024-05-17 23:50:51,010 | INFO     | chi2: 1.8797132801119971
[2024-05-17 16:51:06] 2024-05-17 23:50:51,011 | INFO     | -- intersect: -385122001761.9888
[2024-05-17 16:51:06] 2024-05-17 23:50:51,011 | INFO     | current memory leak: 224.43 B/s (using 68 data points, chi2=1.88)
[2024-05-17 16:51:06] 2024-05-17 23:50:51,011 | INFO     | ..............................
[2024-05-17 16:51:06] 2024-05-17 23:50:51,011 | INFO     | . Timing measurements:
[2024-05-17 16:51:06] 2024-05-17 23:50:51,012 | INFO     | . get job = 0 s
[2024-05-17 16:51:06] 2024-05-17 23:50:51,012 | INFO     | . initial setup = 2 s
[2024-05-17 16:51:06] 2024-05-17 23:50:51,012 | INFO     | . payload setup = 7 s
[2024-05-17 16:51:06] 2024-05-17 23:50:51,012 | INFO     | . stage-in = 0 s
[2024-05-17 16:51:06] 2024-05-17 23:50:51,012 | INFO     | . payload execution = 4570 s
[2024-05-17 16:51:06] 2024-05-17 23:50:51,012 | INFO     | . stage-out = 0 s
[2024-05-17 16:51:06] 2024-05-17 23:50:51,012 | INFO     | . log creation = 0 s
[2024-05-17 16:51:06] 2024-05-17 23:50:51,012 | INFO     | ..............................
[2024-05-17 16:51:06] 2024-05-17 23:50:51,088 | INFO     | 
[2024-05-17 16:51:06] 2024-05-17 23:50:51,088 | INFO     | job summary report
[2024-05-17 16:51:06] 2024-05-17 23:50:51,088 | INFO     | --------------------------------------------------
[2024-05-17 16:51:06] 2024-05-17 23:50:51,088 | INFO     | PanDA job id: 6208167311
[2024-05-17 16:51:06] 2024-05-17 23:50:51,089 | INFO     | task id: 38776125
[2024-05-17 16:51:06] 2024-05-17 23:50:51,089 | INFO     | errors: (none)
[2024-05-17 16:51:06] 2024-05-17 23:50:51,089 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 16:51:06] 2024-05-17 23:50:51,089 | INFO     | pilot state: finished 
[2024-05-17 16:51:06] 2024-05-17 23:50:51,089 | INFO     | transexitcode: 0
[2024-05-17 16:51:06] 2024-05-17 23:50:51,089 | INFO     | exeerrorcode: 0
[2024-05-17 16:51:06] 2024-05-17 23:50:51,089 | INFO     | exeerrordiag: 
[2024-05-17 16:51:06] 2024-05-17 23:50:51,089 | INFO     | exitcode: 0
[2024-05-17 16:51:06] 2024-05-17 23:50:51,090 | INFO     | exitmsg: OK
[2024-05-17 16:51:06] 2024-05-17 23:50:51,090 | INFO     | cpuconsumptiontime: 41595 s
[2024-05-17 16:51:06] 2024-05-17 23:50:51,090 | INFO     | nevents: 400
[2024-05-17 16:51:06] 2024-05-17 23:50:51,090 | INFO     | neventsw: 0
[2024-05-17 16:51:06] 2024-05-17 23:50:51,090 | INFO     | pid: 56800
[2024-05-17 16:51:06] 2024-05-17 23:50:51,090 | INFO     | pgrp: 56800
[2024-05-17 16:51:06] 2024-05-17 23:50:51,090 | INFO     | corecount: 12
[2024-05-17 16:51:06] 2024-05-17 23:50:51,090 | INFO     | event service: False
[2024-05-17 16:51:06] 2024-05-17 23:50:51,090 | INFO     | sizes: {0: 2392242, 5: 2392448, 11: 2392504, 4582: 2418433, 4583: 2427387, 4584: 2427443, 4591: 2427741}
[2024-05-17 16:51:06] 2024-05-17 23:50:51,091 | INFO     | --------------------------------------------------
[2024-05-17 16:51:06] 2024-05-17 23:50:51,091 | INFO     | 
[2024-05-17 16:51:06] 2024-05-17 23:50:51,091 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-17 16:51:06] 2024-05-17 23:50:51,123 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 16:51:06] 2024-05-17 23:50:51,124 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 16:51:06] 2024-05-17 23:50:51,124 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 16:51:06] 2024-05-17 23:50:51,124 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 16:51:06] 2024-05-17 23:50:51,124 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 16:51:06] 2024-05-17 23:50:51,125 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 16:51:06] 2024-05-17 23:50:51,125 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 16:51:06] 2024-05-17 23:50:51,125 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 16:51:06] 2024-05-17 23:50:51,125 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 16:51:06] 2024-05-17 23:50:51,125 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 16:51:06] 2024-05-17 23:50:51,125 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 16:51:06] 2024-05-17 23:50:51,125 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 16:51:06] 2024-05-17 23:50:51,125 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 16:51:06] 2024-05-17 23:50:51,126 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 16:51:06] 2024-05-17 23:50:51,126 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 16:51:06] 2024-05-17 23:50:51,126 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 16:51:06] 2024-05-17 23:50:51,126 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 16:51:06] 2024-05-17 23:50:51,126 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 16:51:06] 2024-05-17 23:50:51,126 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 16:51:06] 2024-05-17 23:50:51,126 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 16:51:06] 2024-05-17 23:50:51,127 | INFO     | job 6208167311 has completed (purged errors)
[2024-05-17 16:51:06] 2024-05-17 23:50:51,127 | INFO     | overall cleanup function is called
[2024-05-17 16:51:06] 2024-05-17 23:50:52,136 | INFO     | --- collectZombieJob: --- 10, [56800]
[2024-05-17 16:51:06] 2024-05-17 23:50:52,137 | INFO     | zombie collector waiting for pid 56800
[2024-05-17 16:51:06] 2024-05-17 23:50:52,137 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 16:51:06] 2024-05-17 23:50:53,137 | INFO     | collected zombie processes
[2024-05-17 16:51:06] 2024-05-17 23:50:53,137 | INFO     | will now attempt to kill all subprocesses of pid=56800
[2024-05-17 16:51:06] 2024-05-17 23:50:53,373 | INFO     | process IDs to be killed: [56800] (in reverse order)
[2024-05-17 16:51:06] 2024-05-17 23:50:53,504 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 16:51:06] 2024-05-17 23:50:53,504 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 16:51:06] 2024-05-17 23:50:53,517 | INFO     | did not find any defunct processes belonging to 56800
[2024-05-17 16:51:06] 2024-05-17 23:50:53,526 | INFO     | did not find any defunct processes belonging to 56800
[2024-05-17 16:51:06] 2024-05-17 23:50:53,526 | INFO     | ready for new job
[2024-05-17 16:51:06] 2024-05-17 23:50:53,526 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 16:51:06] 2024-05-17 23:50:53,527 | INFO     | *************************************
[2024-05-17 16:51:06] 2024-05-17 23:50:53,527 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 16:51:06] 2024-05-17 23:50:53,528 | INFO     | *************************************
[2024-05-17 16:51:06] 2024-05-17 23:50:53,528 | INFO     | 
[2024-05-17 16:51:06] 2024-05-17 23:50:53,530 | INFO     | architecture information:
[2024-05-17 16:51:06] 2024-05-17 23:50:53,531 | INFO     | executing command: cat /etc/os-release
[2024-05-17 16:51:06] 2024-05-17 23:50:53,553 | INFO     | cat /etc/os-release:
[2024-05-17 16:51:06] NAME="CentOS Linux"
[2024-05-17 16:51:06] VERSION="7 (Core)"
[2024-05-17 16:51:06] ID="centos"
[2024-05-17 16:51:06] ID_LIKE="rhel fedora"
[2024-05-17 16:51:06] VERSION_ID="7"
[2024-05-17 16:51:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 16:51:06] ANSI_COLOR="0;31"
[2024-05-17 16:51:06] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 16:51:06] HOME_URL="https://www.centos.org/"
[2024-05-17 16:51:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 16:51:06] 
[2024-05-17 16:51:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 16:51:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 16:51:06] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 16:51:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 16:51:06] 
[2024-05-17 16:51:06] 2024-05-17 23:50:53,554 | INFO     | *************************************
[2024-05-17 16:51:06] 2024-05-17 23:50:54,057 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-17 16:51:06] 2024-05-17 23:50:54,085 | INFO     | sufficient remaining disk space (2125162610688 B)
[2024-05-17 16:51:06] 2024-05-17 23:50:54,085 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 16:51:06] 2024-05-17 23:50:54,085 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 16:51:06] 2024-05-17 23:50:54,086 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 16:51:06] 2024-05-17 23:50:54,086 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-17 16:51:06] 2024-05-17 23:50:54,087 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 16:51:06] 2024-05-17 23:50:54,087 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 16:51:06] 2024-05-17 23:50:54,088 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 16:51:06] 2024-05-17 23:50:54,296 | INFO     | all data control threads have been joined
[2024-05-17 16:51:06] 2024-05-17 23:50:54,540 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 16:51:06] 2024-05-17 23:50:54,541 | INFO     | aborting loop
[2024-05-17 16:51:06] 2024-05-17 23:50:54,702 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 16:51:06] 2024-05-17 23:50:54,728 | INFO     | all job control threads have been joined
[2024-05-17 16:51:06] 2024-05-17 23:50:55,091 | INFO     | [job] retrieve thread has finished
[2024-05-17 16:51:06] 2024-05-17 23:50:55,099 | INFO     | all payload control threads have been joined
[2024-05-17 16:51:06] 2024-05-17 23:50:55,178 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 16:51:06] 2024-05-17 23:50:55,208 | INFO     | [payload] validate_post thread has finished
[2024-05-17 16:51:06] 2024-05-17 23:50:55,301 | INFO     | [data] control thread has finished
[2024-05-17 16:51:06] 2024-05-17 23:50:55,485 | INFO     | [data] copytool_in thread has finished
[2024-05-17 16:51:06] 2024-05-17 23:50:55,541 | INFO     | [job] job monitor thread has finished
[2024-05-17 16:51:06] 2024-05-17 23:50:55,734 | INFO     | [job] control thread has finished
[2024-05-17 16:51:06] 2024-05-17 23:50:55,796 | INFO     | [job] validate thread has finished
[2024-05-17 16:51:06] 2024-05-17 23:50:55,837 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 16:51:06] 2024-05-17 23:50:55,905 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 16:51:06] 2024-05-17 23:50:56,090 | INFO     | [data] copytool_out thread has finished
[2024-05-17 16:51:06] 2024-05-17 23:50:56,103 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 16:51:06] 2024-05-17 23:50:56,105 | INFO     | [payload] control thread has finished
[2024-05-17 16:51:06] 2024-05-17 23:50:56,173 | INFO     | [payload] failed_post thread has finished
[2024-05-17 16:51:06] 2024-05-17 23:50:56,501 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 16:51:06] 2024-05-17 23:50:57,108 | INFO     | [job] queue monitor thread has finished
[2024-05-17 16:51:06] 2024-05-17 23:50:58,708 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 16:51:06] 2024-05-17 23:50:59,834 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140680161302336)>', '<ExcThread(monitor, started 140679304967936)>']
[2024-05-17 16:51:06] 2024-05-17 23:51:00,115 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 16:51:06] 2024-05-17 23:51:00,115 | INFO     | [monitor] control thread has ended
[2024-05-17 16:51:06] 2024-05-17 23:51:04,850 | INFO     | all workflow threads have been joined
[2024-05-17 16:51:06] 2024-05-17 23:51:04,850 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 16:51:06] 2024-05-17 23:51:04,851 | INFO     | traces error code: 0
[2024-05-17 16:51:06] 2024-05-17 23:51:04,851 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 16:51:06] 2024-05-17 23:51:04,955 [wrapper] ==== pilot stdout END ====
[2024-05-17 16:51:06] 2024-05-17 23:51:04,957 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 16:51:06] 2024-05-17 23:51:04,959 [wrapper] pilotpid: 50185
[2024-05-17 16:51:06] 2024-05-17 23:51:04,962 [wrapper] Pilot exit status: 0
[2024-05-17 16:51:06] 2024-05-17 23:51:04,972 [wrapper] pandaids: 6208167311
[2024-05-17 16:51:06] 2024-05-17 23:51:05,347 [wrapper] cleanup: SIGTERM to supervisor_pilot 226523 50186
[2024-05-17 16:51:06] 2024-05-17 23:51:05,350 [wrapper] Test setup, not cleaning
[2024-05-17 16:51:06] 2024-05-17 23:51:05,352 [wrapper] ==== wrapper stdout END ====
[2024-05-17 16:51:06] 2024-05-17 23:51:05,355 [wrapper] ==== wrapper stderr END ====
[2024-05-17 16:51:06] 2024-05-17 23:51:05,384 [wrapper] apfmon messages muted
[2024-05-17 16:51:06]  *** Error codes and diagnostics ***
[2024-05-17 16:51:06]     "exeErrorCode": 0,
[2024-05-17 16:51:06]     "exeErrorDiag": "",
[2024-05-17 16:51:06]     "pilotErrorCode": 0,
[2024-05-17 16:51:06]     "pilotErrorDiag": "",
[2024-05-17 16:51:06]  *** Listing of results directory ***
[2024-05-17 16:51:06] total 835336
[2024-05-17 16:51:06] -rw-r--r-- 1 boinc boinc      5633 May 17 09:25 queuedata.json
[2024-05-17 16:51:06] -rw-r--r-- 1 boinc boinc    467845 May 17 09:25 pilot3.tar.gz
[2024-05-17 16:51:06] -rwx------ 1 boinc boinc     32251 May 17 09:25 runpilot2-wrapper.sh
[2024-05-17 16:51:06] -rw-r--r-- 1 boinc boinc       100 May 17 15:33 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 16:51:06] -rwxr-xr-x 1 boinc boinc      7986 May 17 15:33 run_atlas
[2024-05-17 16:51:06] -rw-r--r-- 1 boinc boinc       105 May 17 15:33 job.xml
[2024-05-17 16:51:06] -rw-r--r-- 2 boinc boinc 601216190 May 17 15:33 EVNT.38776119._000117.pool.root.1
[2024-05-17 16:51:06] -rw-r--r-- 1 boinc boinc      6622 May 17 15:33 init_data.xml
[2024-05-17 16:51:06] -rw-r--r-- 2 boinc boinc    480012 May 17 15:33 input.tar.gz
[2024-05-17 16:51:06] -rw-r--r-- 2 boinc boinc     17537 May 17 15:33 start_atlas.sh
[2024-05-17 16:51:06] drwxrwx--x 2 boinc boinc      4096 May 17 15:33 shared
[2024-05-17 16:51:06] -rw-r--r-- 1 boinc boinc         0 May 17 15:33 boinc_lockfile
[2024-05-17 16:51:06] -rw-r--r-- 1 boinc boinc      2634 May 17 15:33 pandaJob.out
[2024-05-17 16:51:06] -rw------- 1 boinc boinc       424 May 17 15:33 setup.sh.local
[2024-05-17 16:51:06] -rw------- 1 boinc boinc   1019081 May 17 15:34 agis_schedconf.cvmfs.json
[2024-05-17 16:51:06] -rw------- 1 boinc boinc         0 May 17 15:34 agis_ddmendpoints.agis.ALL.json
[2024-05-17 16:51:06] -rw------- 1 boinc boinc   1324701 May 17 15:34 cric_ddmendpoints.json
[2024-05-17 16:51:06] drwx------ 4 boinc boinc      4096 May 17 15:34 pilot3
[2024-05-17 16:51:06] -rw------- 1 boinc boinc 249034919 May 17 16:49 HITS.38776125._014959.pool.root.1
[2024-05-17 16:51:06] -rw------- 1 boinc boinc        95 May 17 16:50 pilot_heartbeat.json
[2024-05-17 16:51:06] -rw-r--r-- 1 boinc boinc       530 May 17 16:50 boinc_task_state.xml
[2024-05-17 16:51:06] -rw------- 1 boinc boinc      1059 May 17 16:50 memory_monitor_summary.json
[2024-05-17 16:51:06] -rw------- 1 boinc boinc    355762 May 17 16:50 log.38776125._014959.job.log.tgz.1
[2024-05-17 16:51:06] -rw------- 1 boinc boinc      7773 May 17 16:50 heartbeat.json
[2024-05-17 16:51:06] -rw-r--r-- 1 boinc boinc      8192 May 17 16:50 boinc_mmap_file
[2024-05-17 16:51:06] -rw-r--r-- 1 boinc boinc        27 May 17 16:50 wrapper_checkpoint.txt
[2024-05-17 16:51:06] -rw------- 1 boinc boinc      4333 May 17 16:51 pilotlog.txt
[2024-05-17 16:51:06] -rw------- 1 boinc boinc    443807 May 17 16:51 log.38776125._014959.job.log.1
[2024-05-17 16:51:06] -rw------- 1 boinc boinc       357 May 17 16:51 output.list
[2024-05-17 16:51:06] -rw-r--r-- 1 boinc boinc       620 May 17 16:51 runtime_log
[2024-05-17 16:51:06] -rw------- 1 boinc boinc    819200 May 17 16:51 result.tar.gz
[2024-05-17 16:51:06] -rw-r--r-- 1 boinc boinc     11286 May 17 16:51 runtime_log.err
[2024-05-17 16:51:06] -rw------- 1 boinc boinc       653 May 17 16:51 mR7MDm2ZFS5nsSi4apGgGQJmABFKDmABFKDm4ySLDm2HRKDmxSjU8m.diag
[2024-05-17 16:51:06] -rw-r--r-- 1 boinc boinc     21669 May 17 16:51 stderr.txt
[2024-05-17 16:51:06] HITS file was successfully produced:
[2024-05-17 16:51:06] -rw------- 1 boinc boinc 249034919 May 17 16:49 shared/HITS.pool.root.1
[2024-05-17 16:51:06]  *** Contents of shared directory: ***
[2024-05-17 16:51:06] total 831628
[2024-05-17 16:51:06] -rw-r--r-- 2 boinc boinc 601216190 May 17 15:33 ATLAS.root_0
[2024-05-17 16:51:06] -rw-r--r-- 2 boinc boinc    480012 May 17 15:33 input.tar.gz
[2024-05-17 16:51:06] -rw-r--r-- 2 boinc boinc     17537 May 17 15:33 start_atlas.sh
[2024-05-17 16:51:06] -rw------- 1 boinc boinc 249034919 May 17 16:49 HITS.pool.root.1
[2024-05-17 16:51:06] -rw------- 1 boinc boinc    819200 May 17 16:51 result.tar.gz
16:51:07 (45888): run_atlas exited; CPU time 41368.952744
16:51:07 (45888): called boinc_finish(0)

</stderr_txt>
]]>

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