Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
17:17:29 (248911): wrapper (7.7.26015): starting
17:17:29 (248911): wrapper: running run_atlas (--nthreads 12)
[2024-05-17 17:17:29] Arguments: --nthreads 12
[2024-05-17 17:17:29] Threads: 12
[2024-05-17 17:17:29] Checking for CVMFS
[2024-05-17 17:17:29] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 17:17:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 17:17:29] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 17:17:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 17:17:30] 2.10.1.0 152792 184184 157232 132859 0 371 36612360 45568000 12447 130560 0 1205722453 99.764 747554759 15872 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-05-17 17:17:30] CVMFS is ok
[2024-05-17 17:17:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 17:17:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 17:17:30] Further information can be found at the LHC@home message board.
[2024-05-17 17:17:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 17:17:30] Checking for apptainer binary...
[2024-05-17 17:17:30] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 17:17:30] Running /usr/bin/apptainer --version
[2024-05-17 17:17:30] apptainer version 1.1.8-1.el7
[2024-05-17 17:17:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 17:17:31] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0064.triumf.lcg
[2024-05-17 17:17:31] apptainer works
[2024-05-17 17:17:31] Set ATHENA_PROC_NUMBER=12
[2024-05-17 17:17:31] Set ATHENA_CORE_NUMBER=12
[2024-05-17 17:17:31] Starting ATLAS job with PandaID=6208166868
[2024-05-17 17:17:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 18:19:12]  *** The last 200 lines of the pilot log: ***
[2024-05-17 18:19:12]  domain=
[2024-05-17 18:19:12]  filesize=342312
[2024-05-17 18:19:12]  filetype=log
[2024-05-17 18:19:12]  guid=74912aba-d4f2-44dd-98f3-4b00a559200b
[2024-05-17 18:19:12]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-17 18:19:12]  is_tar=False
[2024-05-17 18:19:12]  lfn=log.38776125._014875.job.log.tgz.1
[2024-05-17 18:19:12]  mtime=0
[2024-05-17 18:19:12]  protocol_id=None
[2024-05-17 18:19:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-17 18:19:12]  replicas=None
[2024-05-17 18:19:12]  scope=mc23_13p6TeV
[2024-05-17 18:19:12]  status=None
[2024-05-17 18:19:12]  status_code=0
[2024-05-17 18:19:12]  storage_token=
[2024-05-17 18:19:12]  surl=/home/boinc/slots/0/PanDA_Pilot-6208166868/log.38776125._014875.job.log.tgz.1
[2024-05-17 18:19:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8f/de/log.38776125._014875.job.log.tgz.1
[2024-05-17 18:19:12]  workdir=None
[2024-05-17 18:19:12] ]
[2024-05-17 18:19:12] 2024-05-18 01:18:45,221 | INFO     | transferring file log.38776125._014875.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6208166868/log.38776125._014875.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-17 18:19:12] 2024-05-18 01:18:45,221 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6208166868/log.38776125._014875.job.log.tgz.1 /home/boinc/slots/0/log.38776125._014875.job.log.t
[2024-05-17 18:19:12] 2024-05-18 01:18:45,240 | INFO     | adding to output.list: log.38776125._014875.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8f/de/log.38776125._014875.job.log.tg
[2024-05-17 18:19:12] 2024-05-18 01:18:45,241 | INFO     | summary of transferred files:
[2024-05-17 18:19:12] 2024-05-18 01:18:45,241 | INFO     |  -- lfn=log.38776125._014875.job.log.tgz.1, status_code=0, status=transferred
[2024-05-17 18:19:12] 2024-05-18 01:18:45,241 | INFO     | stage-out finished correctly
[2024-05-17 18:19:12] 2024-05-18 01:18:45,292 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-17 18:19:12] 2024-05-18 01:18:47,760 | WARNING  | process 276119 is no longer using CPU - aborting
[2024-05-17 18:19:12] 2024-05-18 01:18:47,760 | INFO     | will not send any job update
[2024-05-17 18:19:12] 2024-05-18 01:18:48,253 | INFO     | job 6208166868 has state=finished
[2024-05-17 18:19:12] 2024-05-18 01:18:48,254 | INFO     | preparing for final server update for job 6208166868 in state='finished'
[2024-05-17 18:19:12] 2024-05-18 01:18:48,254 | INFO     | this job has now completed (state=finished)
[2024-05-17 18:19:12] 2024-05-18 01:18:48,254 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-17 18:19:12] 2024-05-18 01:18:48,254 | INFO     | job 6208166868 has finished - writing final server update
[2024-05-17 18:19:12] 2024-05-18 01:18:48,255 | INFO     | total number of processed events: 400 (read)
[2024-05-17 18:19:12] 2024-05-18 01:18:48,258 | INFO     | executing command: lscpu
[2024-05-17 18:19:12] 2024-05-18 01:18:48,299 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-17 18:19:12] 2024-05-18 01:18:48,300 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-17 18:19:12] 2024-05-18 01:18:48,329 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-17 18:19:12] 2024-05-18 01:18:50,262 | INFO     | monitor loop #288: job 0:6208166868 is in state 'finished'
[2024-05-17 18:19:12] 2024-05-18 01:18:50,263 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 18:19:12] 2024-05-18 01:18:51,637 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-17 18:19:12] 2024-05-18 01:18:51,638 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6208166868/memory_monitor_summary.json (trf name=prmon)
[2024-05-17 18:19:12] 2024-05-18 01:18:51,639 | INFO     | extracted standard info from prmon json
[2024-05-17 18:19:12] 2024-05-18 01:18:51,639 | INFO     | extracted standard memory fields from prmon json
[2024-05-17 18:19:12] 2024-05-18 01:18:51,639 | WARNING  | GPU info not found in prmon json
[2024-05-17 18:19:12] 2024-05-18 01:18:51,639 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-17 18:19:12] 2024-05-18 01:18:51,639 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 18:19:12] 2024-05-18 01:18:51,640 | INFO     | fitting pss+swap vs Time
[2024-05-17 18:19:12] 2024-05-18 01:18:51,640 | INFO     | model: linear, x: [1715991789.0, 1715991850.0, 1715991911.0, 1715991972.0, 1715992033.0, 1715992094.0, 1715992155.0, 1715992216.0, 1715992277.0, 1715992338.0, 1715
[2024-05-17 18:19:12] 2024-05-18 01:18:51,640 | INFO     | sum of square deviations: 46147842.0
[2024-05-17 18:19:12] 2024-05-18 01:18:51,641 | INFO     | sum of deviations: 20630904977.000008
[2024-05-17 18:19:12] 2024-05-18 01:18:51,641 | INFO     | mean x: 1715993375.0
[2024-05-17 18:19:12] 2024-05-18 01:18:51,641 | INFO     | mean y: 2734527.9056603773
[2024-05-17 18:19:12] 2024-05-18 01:18:51,641 | INFO     | -- intersect: -767151150171.33
[2024-05-17 18:19:12] 2024-05-18 01:18:51,641 | INFO     | intersect: -767151150171.33
[2024-05-17 18:19:12] 2024-05-18 01:18:51,641 | INFO     | chi2: 2.190228063840665
[2024-05-17 18:19:12] 2024-05-18 01:18:51,641 | INFO     | -- intersect: -767151150171.33
[2024-05-17 18:19:12] 2024-05-18 01:18:51,641 | INFO     | current memory leak: 447.06 B/s (using 53 data points, chi2=2.19)
[2024-05-17 18:19:12] 2024-05-18 01:18:51,641 | INFO     | ..............................
[2024-05-17 18:19:12] 2024-05-18 01:18:51,641 | INFO     | . Timing measurements:
[2024-05-17 18:19:12] 2024-05-18 01:18:51,641 | INFO     | . get job = 0 s
[2024-05-17 18:19:12] 2024-05-18 01:18:51,641 | INFO     | . initial setup = 2 s
[2024-05-17 18:19:12] 2024-05-18 01:18:51,641 | INFO     | . payload setup = 4 s
[2024-05-17 18:19:12] 2024-05-18 01:18:51,641 | INFO     | . stage-in = 0 s
[2024-05-17 18:19:12] 2024-05-18 01:18:51,641 | INFO     | . payload execution = 3640 s
[2024-05-17 18:19:12] 2024-05-18 01:18:51,641 | INFO     | . stage-out = 0 s
[2024-05-17 18:19:12] 2024-05-18 01:18:51,642 | INFO     | . log creation = 0 s
[2024-05-17 18:19:12] 2024-05-18 01:18:51,642 | INFO     | ..............................
[2024-05-17 18:19:12] 2024-05-18 01:18:51,820 | INFO     | 
[2024-05-17 18:19:12] 2024-05-18 01:18:51,820 | INFO     | job summary report
[2024-05-17 18:19:12] 2024-05-18 01:18:51,820 | INFO     | --------------------------------------------------
[2024-05-17 18:19:12] 2024-05-18 01:18:51,820 | INFO     | PanDA job id: 6208166868
[2024-05-17 18:19:12] 2024-05-18 01:18:51,820 | INFO     | task id: 38776125
[2024-05-17 18:19:12] 2024-05-18 01:18:51,820 | INFO     | errors: (none)
[2024-05-17 18:19:12] 2024-05-18 01:18:51,821 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 18:19:12] 2024-05-18 01:18:51,821 | INFO     | pilot state: finished 
[2024-05-17 18:19:12] 2024-05-18 01:18:51,821 | INFO     | transexitcode: 0
[2024-05-17 18:19:12] 2024-05-18 01:18:51,821 | INFO     | exeerrorcode: 0
[2024-05-17 18:19:12] 2024-05-18 01:18:51,821 | INFO     | exeerrordiag: 
[2024-05-17 18:19:12] 2024-05-18 01:18:51,821 | INFO     | exitcode: 0
[2024-05-17 18:19:12] 2024-05-18 01:18:51,821 | INFO     | exitmsg: OK
[2024-05-17 18:19:12] 2024-05-18 01:18:51,821 | INFO     | cpuconsumptiontime: 32197 s
[2024-05-17 18:19:12] 2024-05-18 01:18:51,821 | INFO     | nevents: 400
[2024-05-17 18:19:12] 2024-05-18 01:18:51,821 | INFO     | neventsw: 0
[2024-05-17 18:19:12] 2024-05-18 01:18:51,822 | INFO     | pid: 276119
[2024-05-17 18:19:12] 2024-05-18 01:18:51,822 | INFO     | pgrp: 276119
[2024-05-17 18:19:12] 2024-05-18 01:18:51,822 | INFO     | corecount: 12
[2024-05-17 18:19:12] 2024-05-18 01:18:51,822 | INFO     | event service: False
[2024-05-17 18:19:12] 2024-05-18 01:18:51,822 | INFO     | sizes: {0: 2392239, 4: 2392445, 11: 2392473, 3649: 2418170, 3650: 2427180, 3656: 2427294}
[2024-05-17 18:19:12] 2024-05-18 01:18:51,822 | INFO     | --------------------------------------------------
[2024-05-17 18:19:12] 2024-05-18 01:18:51,822 | INFO     | 
[2024-05-17 18:19:12] 2024-05-18 01:18:51,822 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-17 18:19:12] 2024-05-18 01:18:51,849 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 18:19:12] 2024-05-18 01:18:51,850 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 18:19:12] 2024-05-18 01:18:51,850 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 18:19:12] 2024-05-18 01:18:51,850 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 18:19:12] 2024-05-18 01:18:51,850 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 18:19:12] 2024-05-18 01:18:51,850 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 18:19:12] 2024-05-18 01:18:51,850 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 18:19:12] 2024-05-18 01:18:51,851 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 18:19:12] 2024-05-18 01:18:51,851 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 18:19:12] 2024-05-18 01:18:51,851 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 18:19:12] 2024-05-18 01:18:51,851 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 18:19:12] 2024-05-18 01:18:51,851 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 18:19:12] 2024-05-18 01:18:51,851 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 18:19:12] 2024-05-18 01:18:51,851 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 18:19:12] 2024-05-18 01:18:51,851 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 18:19:12] 2024-05-18 01:18:51,851 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 18:19:12] 2024-05-18 01:18:51,851 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 18:19:12] 2024-05-18 01:18:51,852 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 18:19:12] 2024-05-18 01:18:51,852 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 18:19:12] 2024-05-18 01:18:51,852 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 18:19:12] 2024-05-18 01:18:51,852 | INFO     | job 6208166868 has completed (purged errors)
[2024-05-17 18:19:12] 2024-05-18 01:18:51,852 | INFO     | overall cleanup function is called
[2024-05-17 18:19:12] 2024-05-18 01:18:52,860 | INFO     | --- collectZombieJob: --- 10, [276119]
[2024-05-17 18:19:12] 2024-05-18 01:18:52,860 | INFO     | zombie collector waiting for pid 276119
[2024-05-17 18:19:12] 2024-05-18 01:18:52,861 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 18:19:12] 2024-05-18 01:18:53,861 | INFO     | collected zombie processes
[2024-05-17 18:19:12] 2024-05-18 01:18:53,862 | INFO     | will now attempt to kill all subprocesses of pid=276119
[2024-05-17 18:19:12] 2024-05-18 01:18:54,056 | INFO     | process IDs to be killed: [276119] (in reverse order)
[2024-05-17 18:19:12] 2024-05-18 01:18:54,150 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 18:19:12] 2024-05-18 01:18:54,150 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 18:19:12] 2024-05-18 01:18:54,157 | INFO     | did not find any defunct processes belonging to 276119
[2024-05-17 18:19:12] 2024-05-18 01:18:54,163 | INFO     | did not find any defunct processes belonging to 276119
[2024-05-17 18:19:12] 2024-05-18 01:18:54,163 | INFO     | ready for new job
[2024-05-17 18:19:12] 2024-05-18 01:18:54,163 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 18:19:12] 2024-05-18 01:18:54,164 | INFO     | *************************************
[2024-05-17 18:19:12] 2024-05-18 01:18:54,164 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 18:19:12] 2024-05-18 01:18:54,164 | INFO     | *************************************
[2024-05-17 18:19:12] 2024-05-18 01:18:54,164 | INFO     | 
[2024-05-17 18:19:12] 2024-05-18 01:18:54,167 | INFO     | architecture information:
[2024-05-17 18:19:12] 2024-05-18 01:18:54,167 | INFO     | executing command: cat /etc/os-release
[2024-05-17 18:19:12] 2024-05-18 01:18:54,180 | INFO     | cat /etc/os-release:
[2024-05-17 18:19:12] NAME="CentOS Linux"
[2024-05-17 18:19:12] VERSION="7 (Core)"
[2024-05-17 18:19:12] ID="centos"
[2024-05-17 18:19:12] ID_LIKE="rhel fedora"
[2024-05-17 18:19:12] VERSION_ID="7"
[2024-05-17 18:19:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 18:19:12] ANSI_COLOR="0;31"
[2024-05-17 18:19:12] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 18:19:12] HOME_URL="https://www.centos.org/"
[2024-05-17 18:19:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 18:19:12] 
[2024-05-17 18:19:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 18:19:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 18:19:12] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 18:19:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 18:19:12] 
[2024-05-17 18:19:12] 2024-05-18 01:18:54,180 | INFO     | *************************************
[2024-05-17 18:19:12] 2024-05-18 01:18:54,682 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-17 18:19:12] 2024-05-18 01:18:54,701 | INFO     | sufficient remaining disk space (2040438718464 B)
[2024-05-17 18:19:12] 2024-05-18 01:18:54,701 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 18:19:12] 2024-05-18 01:18:54,701 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 18:19:12] 2024-05-18 01:18:54,701 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 18:19:12] 2024-05-18 01:18:54,702 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-17 18:19:12] 2024-05-18 01:18:54,702 | INFO     | aborting loop
[2024-05-17 18:19:12] 2024-05-18 01:18:54,702 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 18:19:12] 2024-05-18 01:18:54,702 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 18:19:12] 2024-05-18 01:18:54,702 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 18:19:12] 2024-05-18 01:18:55,290 | INFO     | all payload control threads have been joined
[2024-05-17 18:19:12] 2024-05-18 01:18:55,378 | INFO     | all data control threads have been joined
[2024-05-17 18:19:12] 2024-05-18 01:18:55,616 | INFO     | all job control threads have been joined
[2024-05-17 18:19:12] 2024-05-18 01:18:55,703 | INFO     | [job] retrieve thread has finished
[2024-05-17 18:19:12] 2024-05-18 01:18:55,707 | INFO     | [job] job monitor thread has finished
[2024-05-17 18:19:12] 2024-05-18 01:18:55,800 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 18:19:12] 2024-05-18 01:18:55,851 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 18:19:12] 2024-05-18 01:18:55,989 | INFO     | [payload] failed_post thread has finished
[2024-05-17 18:19:12] 2024-05-18 01:18:55,990 | INFO     | [job] validate thread has finished
[2024-05-17 18:19:12] 2024-05-18 01:18:56,005 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 18:19:12] 2024-05-18 01:18:56,095 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 18:19:12] 2024-05-18 01:18:56,179 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 18:19:12] 2024-05-18 01:18:56,295 | INFO     | [payload] control thread has finished
[2024-05-17 18:19:12] 2024-05-18 01:18:56,384 | INFO     | [data] control thread has finished
[2024-05-17 18:19:12] 2024-05-18 01:18:56,621 | INFO     | [job] control thread has finished
[2024-05-17 18:19:12] 2024-05-18 01:18:56,700 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 18:19:12] 2024-05-18 01:18:56,796 | INFO     | [payload] validate_post thread has finished
[2024-05-17 18:19:12] 2024-05-18 01:18:56,811 | INFO     | [data] copytool_in thread has finished
[2024-05-17 18:19:12] 2024-05-18 01:18:57,705 | INFO     | [job] queue monitor thread has finished
[2024-05-17 18:19:12] 2024-05-18 01:18:57,801 | INFO     | [data] copytool_out thread has finished
[2024-05-17 18:19:12] 2024-05-18 01:18:59,857 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 18:19:12] 2024-05-18 01:19:04,968 | INFO     | job.realtimelogging is not enabled
[2024-05-17 18:19:12] 2024-05-18 01:19:05,971 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 18:19:12] 2024-05-18 01:19:06,905 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139839669086016)>', '<ExcThread(monitor, started 139839018096384)>']
[2024-05-17 18:19:12] 2024-05-18 01:19:07,741 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 18:19:12] 2024-05-18 01:19:07,741 | INFO     | [monitor] control thread has ended
[2024-05-17 18:19:12] 2024-05-18 01:19:11,930 | INFO     | all workflow threads have been joined
[2024-05-17 18:19:12] 2024-05-18 01:19:11,930 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 18:19:12] 2024-05-18 01:19:11,931 | INFO     | traces error code: 0
[2024-05-17 18:19:12] 2024-05-18 01:19:11,931 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 18:19:12] 2024-05-18 01:19:12,000 [wrapper] ==== pilot stdout END ====
[2024-05-17 18:19:12] 2024-05-18 01:19:12,004 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 18:19:12] 2024-05-18 01:19:12,008 [wrapper] pilotpid: 257223
[2024-05-17 18:19:12] 2024-05-18 01:19:12,011 [wrapper] Pilot exit status: 0
[2024-05-17 18:19:12] 2024-05-18 01:19:12,018 [wrapper] pandaids: 6208166868
[2024-05-17 18:19:12] 2024-05-18 01:19:12,085 [wrapper] cleanup: SIGTERM to supervisor_pilot 101737 257224
[2024-05-17 18:19:12] 2024-05-18 01:19:12,087 [wrapper] Test setup, not cleaning
[2024-05-17 18:19:12] 2024-05-18 01:19:12,090 [wrapper] ==== wrapper stdout END ====
[2024-05-17 18:19:12] 2024-05-18 01:19:12,093 [wrapper] ==== wrapper stderr END ====
[2024-05-17 18:19:12] 2024-05-18 01:19:12,099 [wrapper] apfmon messages muted
[2024-05-17 18:19:12]  *** Error codes and diagnostics ***
[2024-05-17 18:19:12]     "exeErrorCode": 0,
[2024-05-17 18:19:12]     "exeErrorDiag": "",
[2024-05-17 18:19:12]     "pilotErrorCode": 0,
[2024-05-17 18:19:12]     "pilotErrorDiag": "",
[2024-05-17 18:19:12]  *** Listing of results directory ***
[2024-05-17 18:19:12] total 831932
[2024-05-17 18:19:12] -rw-r--r-- 1 boinc boinc    467845 May 17 09:05 pilot3.tar.gz
[2024-05-17 18:19:12] -rw-r--r-- 1 boinc boinc      5633 May 17 09:13 queuedata.json
[2024-05-17 18:19:12] -rwx------ 1 boinc boinc     32251 May 17 09:14 runpilot2-wrapper.sh
[2024-05-17 18:19:12] -rw-r--r-- 1 boinc boinc       100 May 17 17:17 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 18:19:12] -rwxr-xr-x 1 boinc boinc      7986 May 17 17:17 run_atlas
[2024-05-17 18:19:12] -rw-r--r-- 1 boinc boinc       105 May 17 17:17 job.xml
[2024-05-17 18:19:12] -rw-r--r-- 2 boinc boinc 599516975 May 17 17:17 EVNT.38776119._000225.pool.root.1
[2024-05-17 18:19:12] -rw-r--r-- 1 boinc boinc      6627 May 17 17:17 init_data.xml
[2024-05-17 18:19:12] -rw-r--r-- 2 boinc boinc     17537 May 17 17:17 start_atlas.sh
[2024-05-17 18:19:12] drwxrwx--x 2 boinc boinc      4096 May 17 17:17 shared
[2024-05-17 18:19:12] -rw-r--r-- 2 boinc boinc    480010 May 17 17:17 input.tar.gz
[2024-05-17 18:19:12] -rw-r--r-- 1 boinc boinc         0 May 17 17:17 boinc_lockfile
[2024-05-17 18:19:12] -rw-r--r-- 1 boinc boinc      2632 May 17 17:17 pandaJob.out
[2024-05-17 18:19:12] -rw------- 1 boinc boinc       424 May 17 17:17 setup.sh.local
[2024-05-17 18:19:12] -rw------- 1 boinc boinc   1019081 May 17 17:17 agis_schedconf.cvmfs.json
[2024-05-17 18:19:12] -rw------- 1 boinc boinc         0 May 17 17:17 agis_ddmendpoints.agis.ALL.json
[2024-05-17 18:19:12] -rw------- 1 boinc boinc   1324701 May 17 17:17 cric_ddmendpoints.json
[2024-05-17 18:19:12] drwx------ 4 boinc boinc      4096 May 17 17:17 pilot3
[2024-05-17 18:19:12] -rw------- 1 boinc boinc 247411362 May 17 18:18 HITS.38776125._014875.pool.root.1
[2024-05-17 18:19:12] -rw-r--r-- 1 boinc boinc       530 May 17 18:18 boinc_task_state.xml
[2024-05-17 18:19:12] -rw------- 1 boinc boinc      1058 May 17 18:18 memory_monitor_summary.json
[2024-05-17 18:19:12] -rw------- 1 boinc boinc    342312 May 17 18:18 log.38776125._014875.job.log.tgz.1
[2024-05-17 18:19:12] -rw------- 1 boinc boinc        95 May 17 18:18 pilot_heartbeat.json
[2024-05-17 18:19:12] -rw------- 1 boinc boinc      7773 May 17 18:18 heartbeat.json
[2024-05-17 18:19:12] -rw-r--r-- 1 boinc boinc        27 May 17 18:19 wrapper_checkpoint.txt
[2024-05-17 18:19:12] -rw-r--r-- 1 boinc boinc      8192 May 17 18:19 boinc_mmap_file
[2024-05-17 18:19:12] -rw------- 1 boinc boinc      4405 May 17 18:19 pilotlog.txt
[2024-05-17 18:19:12] -rw------- 1 boinc boinc    376467 May 17 18:19 log.38776125._014875.job.log.1
[2024-05-17 18:19:12] -rw------- 1 boinc boinc       357 May 17 18:19 output.list
[2024-05-17 18:19:12] -rw-r--r-- 1 boinc boinc       620 May 17 18:19 runtime_log
[2024-05-17 18:19:12] -rw------- 1 boinc boinc    737280 May 17 18:19 result.tar.gz
[2024-05-17 18:19:12] -rw-r--r-- 1 boinc boinc     11286 May 17 18:19 runtime_log.err
[2024-05-17 18:19:12] -rw------- 1 boinc boinc       652 May 17 18:19 DIJODm1OFS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmBHRKDmsM7JZm.diag
[2024-05-17 18:19:12] -rw-r--r-- 1 boinc boinc     21451 May 17 18:19 stderr.txt
[2024-05-17 18:19:12] HITS file was successfully produced:
[2024-05-17 18:19:12] -rw------- 1 boinc boinc 247411362 May 17 18:18 shared/HITS.pool.root.1
[2024-05-17 18:19:12]  *** Contents of shared directory: ***
[2024-05-17 18:19:12] total 828304
[2024-05-17 18:19:12] -rw-r--r-- 2 boinc boinc 599516975 May 17 17:17 ATLAS.root_0
[2024-05-17 18:19:12] -rw-r--r-- 2 boinc boinc     17537 May 17 17:17 start_atlas.sh
[2024-05-17 18:19:12] -rw-r--r-- 2 boinc boinc    480010 May 17 17:17 input.tar.gz
[2024-05-17 18:19:12] -rw------- 1 boinc boinc 247411362 May 17 18:18 HITS.pool.root.1
[2024-05-17 18:19:12] -rw------- 1 boinc boinc    737280 May 17 18:19 result.tar.gz
18:19:14 (248911): run_atlas exited; CPU time 32036.491862
18:19:14 (248911): called boinc_finish(0)

</stderr_txt>
]]>

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