Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
19:16:00 (14751): wrapper (7.7.26015): starting
19:16:00 (14751): wrapper: running run_atlas (--nthreads 12)
[2024-05-17 19:16:00] Arguments: --nthreads 12
[2024-05-17 19:16:00] Threads: 12
[2024-05-17 19:16:00] Checking for CVMFS
[2024-05-17 19:16:01] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 19:16:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 19:16:01] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 19:16:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 19:16:01] 2.10.1.0 2815 173047 183852 132862 0 107 27690452 45568001 12317 130560 0 1047527329 99.774 620841229 17821 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-05-17 19:16:01] CVMFS is ok
[2024-05-17 19:16:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 19:16:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 19:16:01] Further information can be found at the LHC@home message board.
[2024-05-17 19:16:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 19:16:01] Checking for apptainer binary...
[2024-05-17 19:16:01] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 19:16:01] Running /usr/bin/apptainer --version
[2024-05-17 19:16:01] apptainer version 1.1.8-1.el7
[2024-05-17 19:16:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 19:16:02] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0164.triumf.lcg
[2024-05-17 19:16:02] apptainer works
[2024-05-17 19:16:02] Set ATHENA_PROC_NUMBER=12
[2024-05-17 19:16:02] Set ATHENA_CORE_NUMBER=12
[2024-05-17 19:16:02] Starting ATLAS job with PandaID=6208166838
[2024-05-17 19:16:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 20:16:20]  *** The last 200 lines of the pilot log: ***
[2024-05-17 20:16:20]  domain=
[2024-05-17 20:16:20]  filesize=338593
[2024-05-17 20:16:20]  filetype=log
[2024-05-17 20:16:20]  guid=5e346f67-d593-425e-9e35-1ee81828fed7
[2024-05-17 20:16:20]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-17 20:16:20]  is_tar=False
[2024-05-17 20:16:20]  lfn=log.38776125._014853.job.log.tgz.1
[2024-05-17 20:16:20]  mtime=0
[2024-05-17 20:16:20]  protocol_id=None
[2024-05-17 20:16:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-17 20:16:20]  replicas=None
[2024-05-17 20:16:20]  scope=mc23_13p6TeV
[2024-05-17 20:16:20]  status=None
[2024-05-17 20:16:20]  status_code=0
[2024-05-17 20:16:20]  storage_token=
[2024-05-17 20:16:20]  surl=/home/boinc/slots/0/PanDA_Pilot-6208166838/log.38776125._014853.job.log.tgz.1
[2024-05-17 20:16:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ed/57/log.38776125._014853.job.log.tgz.1
[2024-05-17 20:16:20]  workdir=None
[2024-05-17 20:16:20] ]
[2024-05-17 20:16:20] 2024-05-18 03:15:55,772 | INFO     | transferring file log.38776125._014853.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6208166838/log.38776125._014853.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-17 20:16:20] 2024-05-18 03:15:55,772 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6208166838/log.38776125._014853.job.log.tgz.1 /home/boinc/slots/0/log.38776125._014853.job.log.t
[2024-05-17 20:16:20] 2024-05-18 03:15:55,793 | INFO     | adding to output.list: log.38776125._014853.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ed/57/log.38776125._014853.job.log.tg
[2024-05-17 20:16:20] 2024-05-18 03:15:55,794 | INFO     | summary of transferred files:
[2024-05-17 20:16:20] 2024-05-18 03:15:55,794 | INFO     |  -- lfn=log.38776125._014853.job.log.tgz.1, status_code=0, status=transferred
[2024-05-17 20:16:20] 2024-05-18 03:15:55,794 | INFO     | stage-out finished correctly
[2024-05-17 20:16:20] 2024-05-18 03:15:55,870 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-17 20:16:20] 2024-05-18 03:15:56,180 | INFO     | monitor loop #281: job 0:6208166838 is in state 'finished'
[2024-05-17 20:16:20] 2024-05-18 03:15:56,181 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 20:16:20] 2024-05-18 03:15:56,264 | INFO     | job 6208166838 has state=finished
[2024-05-17 20:16:20] 2024-05-18 03:15:56,264 | INFO     | preparing for final server update for job 6208166838 in state='finished'
[2024-05-17 20:16:20] 2024-05-18 03:15:56,265 | INFO     | this job has now completed (state=finished)
[2024-05-17 20:16:20] 2024-05-18 03:15:56,265 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-17 20:16:20] 2024-05-18 03:15:56,265 | INFO     | job 6208166838 has finished - writing final server update
[2024-05-17 20:16:20] 2024-05-18 03:15:56,265 | INFO     | total number of processed events: 400 (read)
[2024-05-17 20:16:20] 2024-05-18 03:15:56,272 | INFO     | executing command: lscpu
[2024-05-17 20:16:20] 2024-05-18 03:15:56,340 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-17 20:16:20] 2024-05-18 03:15:56,341 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-17 20:16:20] 2024-05-18 03:15:56,395 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-17 20:16:20] 2024-05-18 03:15:58,686 | INFO     | monitor loop #282: job 0:6208166838 is in state 'finished'
[2024-05-17 20:16:20] 2024-05-18 03:15:58,687 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 20:16:20] 2024-05-18 03:16:00,154 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-17 20:16:20] 2024-05-18 03:16:00,155 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6208166838/memory_monitor_summary.json (trf name=prmon)
[2024-05-17 20:16:20] 2024-05-18 03:16:00,156 | INFO     | extracted standard info from prmon json
[2024-05-17 20:16:20] 2024-05-18 03:16:00,156 | INFO     | extracted standard memory fields from prmon json
[2024-05-17 20:16:20] 2024-05-18 03:16:00,157 | WARNING  | GPU info not found in prmon json
[2024-05-17 20:16:20] 2024-05-18 03:16:00,157 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-17 20:16:20] 2024-05-18 03:16:00,157 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 20:16:20] 2024-05-18 03:16:00,159 | INFO     | fitting pss+swap vs Time
[2024-05-17 20:16:20] 2024-05-18 03:16:00,160 | INFO     | model: linear, x: [1715998902.0, 1715998963.0, 1715999024.0, 1715999085.0, 1715999146.0, 1715999207.0, 1715999268.0, 1715999329.0, 1715999390.0, 1715999451.0, 1715
[2024-05-17 20:16:20] 2024-05-18 03:16:00,160 | INFO     | sum of square deviations: 43584073.0
[2024-05-17 20:16:20] 2024-05-18 03:16:00,160 | INFO     | sum of deviations: 19532164467.5
[2024-05-17 20:16:20] 2024-05-18 03:16:00,160 | INFO     | mean x: 1716000457.5
[2024-05-17 20:16:20] 2024-05-18 03:16:00,160 | INFO     | mean y: 2768032.0576923075
[2024-05-17 20:16:20] 2024-05-18 03:16:00,161 | INFO     | -- intersect: -769021346859.5276
[2024-05-17 20:16:20] 2024-05-18 03:16:00,161 | INFO     | intersect: -769021346859.5276
[2024-05-17 20:16:20] 2024-05-18 03:16:00,161 | INFO     | chi2: 1.9753941070579824
[2024-05-17 20:16:20] 2024-05-18 03:16:00,161 | INFO     | -- intersect: -769021346859.5276
[2024-05-17 20:16:20] 2024-05-18 03:16:00,161 | INFO     | current memory leak: 448.15 B/s (using 52 data points, chi2=1.98)
[2024-05-17 20:16:20] 2024-05-18 03:16:00,162 | INFO     | ..............................
[2024-05-17 20:16:20] 2024-05-18 03:16:00,162 | INFO     | . Timing measurements:
[2024-05-17 20:16:20] 2024-05-18 03:16:00,162 | INFO     | . get job = 0 s
[2024-05-17 20:16:20] 2024-05-18 03:16:00,162 | INFO     | . initial setup = 2 s
[2024-05-17 20:16:20] 2024-05-18 03:16:00,162 | INFO     | . payload setup = 5 s
[2024-05-17 20:16:20] 2024-05-18 03:16:00,162 | INFO     | . stage-in = 0 s
[2024-05-17 20:16:20] 2024-05-18 03:16:00,162 | INFO     | . payload execution = 3557 s
[2024-05-17 20:16:20] 2024-05-18 03:16:00,163 | INFO     | . stage-out = 0 s
[2024-05-17 20:16:20] 2024-05-18 03:16:00,163 | INFO     | . log creation = 0 s
[2024-05-17 20:16:20] 2024-05-18 03:16:00,163 | INFO     | ..............................
[2024-05-17 20:16:20] 2024-05-18 03:16:00,252 | INFO     | 
[2024-05-17 20:16:20] 2024-05-18 03:16:00,253 | INFO     | job summary report
[2024-05-17 20:16:20] 2024-05-18 03:16:00,253 | INFO     | --------------------------------------------------
[2024-05-17 20:16:20] 2024-05-18 03:16:00,253 | INFO     | PanDA job id: 6208166838
[2024-05-17 20:16:20] 2024-05-18 03:16:00,253 | INFO     | task id: 38776125
[2024-05-17 20:16:20] 2024-05-18 03:16:00,253 | INFO     | errors: (none)
[2024-05-17 20:16:20] 2024-05-18 03:16:00,253 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 20:16:20] 2024-05-18 03:16:00,253 | INFO     | pilot state: finished 
[2024-05-17 20:16:20] 2024-05-18 03:16:00,253 | INFO     | transexitcode: 0
[2024-05-17 20:16:20] 2024-05-18 03:16:00,253 | INFO     | exeerrorcode: 0
[2024-05-17 20:16:20] 2024-05-18 03:16:00,253 | INFO     | exeerrordiag: 
[2024-05-17 20:16:20] 2024-05-18 03:16:00,253 | INFO     | exitcode: 0
[2024-05-17 20:16:20] 2024-05-18 03:16:00,253 | INFO     | exitmsg: OK
[2024-05-17 20:16:20] 2024-05-18 03:16:00,254 | INFO     | cpuconsumptiontime: 31996 s
[2024-05-17 20:16:20] 2024-05-18 03:16:00,254 | INFO     | nevents: 400
[2024-05-17 20:16:20] 2024-05-18 03:16:00,254 | INFO     | neventsw: 0
[2024-05-17 20:16:20] 2024-05-18 03:16:00,254 | INFO     | pid: 29547
[2024-05-17 20:16:20] 2024-05-18 03:16:00,254 | INFO     | pgrp: 29547
[2024-05-17 20:16:20] 2024-05-18 03:16:00,254 | INFO     | corecount: 12
[2024-05-17 20:16:20] 2024-05-18 03:16:00,254 | INFO     | event service: False
[2024-05-17 20:16:20] 2024-05-18 03:16:00,254 | INFO     | sizes: {0: 2392063, 1: 2392262, 5: 2392468, 11: 2392524, 3566: 2418158, 3567: 2418157, 3568: 2427351, 3573: 2427465}
[2024-05-17 20:16:20] 2024-05-18 03:16:00,254 | INFO     | --------------------------------------------------
[2024-05-17 20:16:20] 2024-05-18 03:16:00,255 | INFO     | 
[2024-05-17 20:16:20] 2024-05-18 03:16:00,255 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-17 20:16:20] 2024-05-18 03:16:00,281 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 20:16:20] 2024-05-18 03:16:00,282 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 20:16:20] 2024-05-18 03:16:00,282 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 20:16:20] 2024-05-18 03:16:00,282 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 20:16:20] 2024-05-18 03:16:00,282 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 20:16:20] 2024-05-18 03:16:00,283 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 20:16:20] 2024-05-18 03:16:00,283 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 20:16:20] 2024-05-18 03:16:00,283 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 20:16:20] 2024-05-18 03:16:00,283 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 20:16:20] 2024-05-18 03:16:00,283 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 20:16:20] 2024-05-18 03:16:00,283 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 20:16:20] 2024-05-18 03:16:00,283 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 20:16:20] 2024-05-18 03:16:00,283 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 20:16:20] 2024-05-18 03:16:00,283 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 20:16:20] 2024-05-18 03:16:00,284 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 20:16:20] 2024-05-18 03:16:00,284 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 20:16:20] 2024-05-18 03:16:00,284 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 20:16:20] 2024-05-18 03:16:00,284 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 20:16:20] 2024-05-18 03:16:00,284 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 20:16:20] 2024-05-18 03:16:00,284 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 20:16:20] 2024-05-18 03:16:00,284 | INFO     | job 6208166838 has completed (purged errors)
[2024-05-17 20:16:20] 2024-05-18 03:16:00,285 | INFO     | overall cleanup function is called
[2024-05-17 20:16:20] 2024-05-18 03:16:01,293 | INFO     | --- collectZombieJob: --- 10, [29547]
[2024-05-17 20:16:20] 2024-05-18 03:16:01,294 | INFO     | zombie collector waiting for pid 29547
[2024-05-17 20:16:20] 2024-05-18 03:16:01,294 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 20:16:20] 2024-05-18 03:16:02,299 | INFO     | collected zombie processes
[2024-05-17 20:16:20] 2024-05-18 03:16:02,300 | INFO     | will now attempt to kill all subprocesses of pid=29547
[2024-05-17 20:16:20] 2024-05-18 03:16:02,501 | INFO     | process IDs to be killed: [29547] (in reverse order)
[2024-05-17 20:16:20] 2024-05-18 03:16:02,609 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 20:16:20] 2024-05-18 03:16:02,610 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 20:16:20] 2024-05-18 03:16:02,622 | INFO     | did not find any defunct processes belonging to 29547
[2024-05-17 20:16:20] 2024-05-18 03:16:02,632 | INFO     | did not find any defunct processes belonging to 29547
[2024-05-17 20:16:20] 2024-05-18 03:16:02,632 | INFO     | ready for new job
[2024-05-17 20:16:20] 2024-05-18 03:16:02,633 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 20:16:20] 2024-05-18 03:16:02,634 | INFO     | *************************************
[2024-05-17 20:16:20] 2024-05-18 03:16:02,635 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 20:16:20] 2024-05-18 03:16:02,635 | INFO     | *************************************
[2024-05-17 20:16:20] 2024-05-18 03:16:02,635 | INFO     | 
[2024-05-17 20:16:20] 2024-05-18 03:16:02,639 | INFO     | architecture information:
[2024-05-17 20:16:20] 2024-05-18 03:16:02,639 | INFO     | executing command: cat /etc/os-release
[2024-05-17 20:16:20] 2024-05-18 03:16:02,661 | INFO     | cat /etc/os-release:
[2024-05-17 20:16:20] NAME="CentOS Linux"
[2024-05-17 20:16:20] VERSION="7 (Core)"
[2024-05-17 20:16:20] ID="centos"
[2024-05-17 20:16:20] ID_LIKE="rhel fedora"
[2024-05-17 20:16:20] VERSION_ID="7"
[2024-05-17 20:16:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 20:16:20] ANSI_COLOR="0;31"
[2024-05-17 20:16:20] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 20:16:20] HOME_URL="https://www.centos.org/"
[2024-05-17 20:16:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 20:16:20] 
[2024-05-17 20:16:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 20:16:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 20:16:20] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 20:16:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 20:16:20] 
[2024-05-17 20:16:20] 2024-05-18 03:16:02,662 | INFO     | *************************************
[2024-05-17 20:16:20] 2024-05-18 03:16:03,165 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-17 20:16:20] 2024-05-18 03:16:03,192 | INFO     | sufficient remaining disk space (2098834964480 B)
[2024-05-17 20:16:20] 2024-05-18 03:16:03,193 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 20:16:20] 2024-05-18 03:16:03,193 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 20:16:20] 2024-05-18 03:16:03,193 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 20:16:20] 2024-05-18 03:16:03,194 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-17 20:16:20] 2024-05-18 03:16:03,194 | INFO     | aborting loop
[2024-05-17 20:16:20] 2024-05-18 03:16:03,195 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 20:16:20] 2024-05-18 03:16:03,195 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 20:16:20] 2024-05-18 03:16:03,195 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 20:16:20] 2024-05-18 03:16:03,504 | INFO     | all payload control threads have been joined
[2024-05-17 20:16:20] 2024-05-18 03:16:03,518 | INFO     | all job control threads have been joined
[2024-05-17 20:16:20] 2024-05-18 03:16:03,752 | INFO     | all data control threads have been joined
[2024-05-17 20:16:20] 2024-05-18 03:16:03,886 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 20:16:20] 2024-05-18 03:16:04,197 | INFO     | [job] retrieve thread has finished
[2024-05-17 20:16:20] 2024-05-18 03:16:04,198 | INFO     | [job] job monitor thread has finished
[2024-05-17 20:16:20] 2024-05-18 03:16:04,505 | INFO     | [payload] control thread has finished
[2024-05-17 20:16:20] 2024-05-18 03:16:04,522 | INFO     | [job] control thread has finished
[2024-05-17 20:16:20] 2024-05-18 03:16:04,700 | INFO     | [payload] failed_post thread has finished
[2024-05-17 20:16:20] 2024-05-18 03:16:04,758 | INFO     | [data] control thread has finished
[2024-05-17 20:16:20] 2024-05-18 03:16:04,799 | INFO     | [payload] validate_post thread has finished
[2024-05-17 20:16:20] 2024-05-18 03:16:04,928 | INFO     | [data] copytool_in thread has finished
[2024-05-17 20:16:20] 2024-05-18 03:16:05,020 | INFO     | [job] validate thread has finished
[2024-05-17 20:16:20] 2024-05-18 03:16:05,239 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 20:16:20] 2024-05-18 03:16:05,266 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 20:16:20] 2024-05-18 03:16:05,344 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 20:16:20] 2024-05-18 03:16:05,370 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 20:16:20] 2024-05-18 03:16:05,893 | INFO     | [data] copytool_out thread has finished
[2024-05-17 20:16:20] 2024-05-18 03:16:06,273 | INFO     | [job] queue monitor thread has finished
[2024-05-17 20:16:20] 2024-05-18 03:16:06,473 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 20:16:20] 2024-05-18 03:16:10,479 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 20:16:20] 2024-05-18 03:16:13,259 | INFO     | job.realtimelogging is not enabled
[2024-05-17 20:16:20] 2024-05-18 03:16:14,262 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 20:16:20] 2024-05-18 03:16:14,334 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140431817480000)>', '<ExcThread(monitor, started 140431262213888)>']
[2024-05-17 20:16:20] 2024-05-18 03:16:15,261 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 20:16:20] 2024-05-18 03:16:15,261 | INFO     | [monitor] control thread has ended
[2024-05-17 20:16:20] 2024-05-18 03:16:19,352 | INFO     | all workflow threads have been joined
[2024-05-17 20:16:20] 2024-05-18 03:16:19,353 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 20:16:20] 2024-05-18 03:16:19,353 | INFO     | traces error code: 0
[2024-05-17 20:16:20] 2024-05-18 03:16:19,353 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 20:16:20] 2024-05-18 03:16:19,474 [wrapper] ==== pilot stdout END ====
[2024-05-17 20:16:20] 2024-05-18 03:16:19,477 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 20:16:20] 2024-05-18 03:16:19,480 [wrapper] pilotpid: 20994
[2024-05-17 20:16:20] 2024-05-18 03:16:19,483 [wrapper] Pilot exit status: 0
[2024-05-17 20:16:20] 2024-05-18 03:16:19,493 [wrapper] pandaids: 6208166838
[2024-05-17 20:16:20] 2024-05-18 03:16:19,572 [wrapper] cleanup: SIGTERM to supervisor_pilot 256494 20995
[2024-05-17 20:16:20] 2024-05-18 03:16:19,577 [wrapper] Test setup, not cleaning
[2024-05-17 20:16:20] 2024-05-18 03:16:19,581 [wrapper] ==== wrapper stdout END ====
[2024-05-17 20:16:20] 2024-05-18 03:16:19,585 [wrapper] ==== wrapper stderr END ====
[2024-05-17 20:16:20] 2024-05-18 03:16:19,591 [wrapper] apfmon messages muted
[2024-05-17 20:16:20]  *** Error codes and diagnostics ***
[2024-05-17 20:16:20]     "exeErrorCode": 0,
[2024-05-17 20:16:20]     "exeErrorDiag": "",
[2024-05-17 20:16:20]     "pilotErrorCode": 0,
[2024-05-17 20:16:20]     "pilotErrorDiag": "",
[2024-05-17 20:16:20]  *** Listing of results directory ***
[2024-05-17 20:16:20] total 833644
[2024-05-17 20:16:20] -rw-r--r-- 1 boinc boinc    467845 May 17 09:05 pilot3.tar.gz
[2024-05-17 20:16:20] -rw-r--r-- 1 boinc boinc      5633 May 17 09:10 queuedata.json
[2024-05-17 20:16:20] -rwx------ 1 boinc boinc     32251 May 17 09:10 runpilot2-wrapper.sh
[2024-05-17 20:16:20] -rw-r--r-- 1 boinc boinc       100 May 17 19:16 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 20:16:20] -rwxr-xr-x 1 boinc boinc      7986 May 17 19:16 run_atlas
[2024-05-17 20:16:20] -rw-r--r-- 1 boinc boinc       105 May 17 19:16 job.xml
[2024-05-17 20:16:20] -rw-r--r-- 1 boinc boinc      6626 May 17 19:16 init_data.xml
[2024-05-17 20:16:20] -rw-r--r-- 2 boinc boinc 600826907 May 17 19:16 EVNT.38776119._000097.pool.root.1
[2024-05-17 20:16:20] -rw-r--r-- 2 boinc boinc     17537 May 17 19:16 start_atlas.sh
[2024-05-17 20:16:20] drwxrwx--x 2 boinc boinc      4096 May 17 19:16 shared
[2024-05-17 20:16:20] -rw-r--r-- 2 boinc boinc    480008 May 17 19:16 input.tar.gz
[2024-05-17 20:16:20] -rw-r--r-- 1 boinc boinc         0 May 17 19:16 boinc_lockfile
[2024-05-17 20:16:20] -rw-r--r-- 1 boinc boinc      2630 May 17 19:16 pandaJob.out
[2024-05-17 20:16:20] -rw------- 1 boinc boinc       424 May 17 19:16 setup.sh.local
[2024-05-17 20:16:20] -rw------- 1 boinc boinc   1019073 May 17 19:16 agis_schedconf.cvmfs.json
[2024-05-17 20:16:20] -rw------- 1 boinc boinc         0 May 17 19:16 agis_ddmendpoints.agis.ALL.json
[2024-05-17 20:16:20] -rw------- 1 boinc boinc   1324701 May 17 19:16 cric_ddmendpoints.json
[2024-05-17 20:16:20] drwx------ 4 boinc boinc      4096 May 17 19:16 pilot3
[2024-05-17 20:16:20] -rw------- 1 boinc boinc        95 May 17 20:15 pilot_heartbeat.json
[2024-05-17 20:16:20] -rw-r--r-- 1 boinc boinc       530 May 17 20:15 boinc_task_state.xml
[2024-05-17 20:16:20] -rw------- 1 boinc boinc 247892715 May 17 20:15 HITS.38776125._014853.pool.root.1
[2024-05-17 20:16:20] -rw------- 1 boinc boinc      1071 May 17 20:15 memory_monitor_summary.json
[2024-05-17 20:16:20] -rw------- 1 boinc boinc    338593 May 17 20:15 log.38776125._014853.job.log.tgz.1
[2024-05-17 20:16:20] -rw------- 1 boinc boinc      7770 May 17 20:16 heartbeat.json
[2024-05-17 20:16:20] -rw-r--r-- 1 boinc boinc      8192 May 17 20:16 boinc_mmap_file
[2024-05-17 20:16:20] -rw-r--r-- 1 boinc boinc        27 May 17 20:16 wrapper_checkpoint.txt
[2024-05-17 20:16:20] -rw------- 1 boinc boinc      4405 May 17 20:16 pilotlog.txt
[2024-05-17 20:16:20] -rw------- 1 boinc boinc    363633 May 17 20:16 log.38776125._014853.job.log.1
[2024-05-17 20:16:20] -rw------- 1 boinc boinc       357 May 17 20:16 output.list
[2024-05-17 20:16:20] -rw-r--r-- 1 boinc boinc       620 May 17 20:16 runtime_log
[2024-05-17 20:16:20] -rw------- 1 boinc boinc    716800 May 17 20:16 result.tar.gz
[2024-05-17 20:16:20] -rw------- 1 boinc boinc       651 May 17 20:16 CZbKDmJLFS5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmJLLKDmWG9V7n.diag
[2024-05-17 20:16:20] -rw-r--r-- 1 boinc boinc     11286 May 17 20:16 runtime_log.err
[2024-05-17 20:16:20] -rw-r--r-- 1 boinc boinc     21527 May 17 20:16 stderr.txt
[2024-05-17 20:16:20] HITS file was successfully produced:
[2024-05-17 20:16:20] -rw------- 1 boinc boinc 247892715 May 17 20:15 shared/HITS.pool.root.1
[2024-05-17 20:16:20]  *** Contents of shared directory: ***
[2024-05-17 20:16:20] total 830032
[2024-05-17 20:16:20] -rw-r--r-- 2 boinc boinc 600826907 May 17 19:16 ATLAS.root_0
[2024-05-17 20:16:20] -rw-r--r-- 2 boinc boinc     17537 May 17 19:16 start_atlas.sh
[2024-05-17 20:16:20] -rw-r--r-- 2 boinc boinc    480008 May 17 19:16 input.tar.gz
[2024-05-17 20:16:20] -rw------- 1 boinc boinc 247892715 May 17 20:15 HITS.pool.root.1
[2024-05-17 20:16:20] -rw------- 1 boinc boinc    716800 May 17 20:16 result.tar.gz
20:16:21 (14751): run_atlas exited; CPU time 31867.523729
20:16:21 (14751): called boinc_finish(0)

</stderr_txt>
]]>

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