Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:32:58 (2614007): wrapper (7.7.26015): starting
09:32:58 (2614007): wrapper: running run_atlas (--nthreads 4)
[2024-05-19 09:32:58] Arguments: --nthreads 4
[2024-05-19 09:32:58] Threads: 4
[2024-05-19 09:32:58] Checking for CVMFS
[2024-05-19 09:32:58] No cvmfs_config command found, will try listing directly
[2024-05-19 09:32:58] CVMFS is ok
[2024-05-19 09:32:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 09:32:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 09:32:58] Further information can be found at the LHC@home message board.
[2024-05-19 09:32:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 09:32:58] Checking for apptainer binary...
[2024-05-19 09:32:58] which: no apptainer in ((null))
[2024-05-19 09:32:58] apptainer is not installed, using version from CVMFS
[2024-05-19 09:32:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 09:32:59] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2024-05-19 09:32:59] apptainer works
[2024-05-19 09:32:59] Set ATHENA_PROC_NUMBER=4
[2024-05-19 09:32:59] Set ATHENA_CORE_NUMBER=4
[2024-05-19 09:32:59] Starting ATLAS job with PandaID=6208156310
[2024-05-19 09:32:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 14:32:22]  *** The last 200 lines of the pilot log: ***
[2024-05-19 14:32:22] 2024-05-19 12:32:06,449 | WARNING  | GPU info not found in prmon json
[2024-05-19 14:32:22] 2024-05-19 12:32:06,449 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-19 14:32:22] 2024-05-19 12:32:06,449 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-19 14:32:22] 2024-05-19 12:32:06,454 | INFO     | fitting pss+swap vs Time
[2024-05-19 14:32:22] 2024-05-19 12:32:06,454 | INFO     | model: linear, x: [1716104017.0, 1716104078.0, 1716104139.0, 1716104200.0, 1716104261.0, 1716104322.0, 1716104383.0, 1716104444.0, 1716104505.0, 1716104566.0, 1716
[2024-05-19 14:32:22] 2024-05-19 12:32:06,454 | INFO     | sum of square deviations: 7879803557.5
[2024-05-19 14:32:22] 2024-05-19 12:32:06,457 | INFO     | sum of deviations: 116586028234.50002
[2024-05-19 14:32:22] 2024-05-19 12:32:06,457 | INFO     | mean x: 1716112953.5
[2024-05-19 14:32:22] 2024-05-19 12:32:06,457 | INFO     | mean y: 2312585.0986394556
[2024-05-19 14:32:22] 2024-05-19 12:32:06,457 | INFO     | -- intersect: -25388522578.540806
[2024-05-19 14:32:22] 2024-05-19 12:32:06,457 | INFO     | intersect: -25388522578.540806
[2024-05-19 14:32:22] 2024-05-19 12:32:06,458 | INFO     | chi2: 4.70261840137268
[2024-05-19 14:32:22] 2024-05-19 12:32:06,458 | INFO     | model: linear, x: [1716104017.0, 1716104078.0, 1716104139.0, 1716104200.0, 1716104261.0, 1716104322.0, 1716104383.0, 1716104444.0, 1716104505.0, 1716104566.0, 1716
[2024-05-19 14:32:22] 2024-05-19 12:32:06,458 | INFO     | sum of square deviations: 7484568240.0
[2024-05-19 14:32:22] 2024-05-19 12:32:06,460 | INFO     | sum of deviations: 133184770717.0
[2024-05-19 14:32:22] 2024-05-19 12:32:06,460 | INFO     | mean x: 1716112801.0
[2024-05-19 14:32:22] 2024-05-19 12:32:06,461 | INFO     | mean y: 2318889.2076124568
[2024-05-19 14:32:22] 2024-05-19 12:32:06,461 | INFO     | -- intersect: -30535192774.3501
[2024-05-19 14:32:22] 2024-05-19 12:32:06,461 | INFO     | intersect: -30535192774.3501
[2024-05-19 14:32:22] 2024-05-19 12:32:06,461 | INFO     | chi2: 3.9091276297879376
[2024-05-19 14:32:22] 2024-05-19 12:32:06,461 | INFO     | current chi2=3.9091276297879376 (change=16.873382100344887 %)
[2024-05-19 14:32:22] 2024-05-19 12:32:06,461 | INFO     | right removable region: 288
[2024-05-19 14:32:22] 2024-05-19 12:32:06,462 | INFO     | model: linear, x: [1716104322.0, 1716104383.0, 1716104444.0, 1716104505.0, 1716104566.0, 1716104627.0, 1716104688.0, 1716104749.0, 1716104810.0, 1716104871.0, 1716
[2024-05-19 14:32:22] 2024-05-19 12:32:06,462 | INFO     | sum of square deviations: 7484568240.0
[2024-05-19 14:32:22] 2024-05-19 12:32:06,465 | INFO     | sum of deviations: 49173011096.0
[2024-05-19 14:32:22] 2024-05-19 12:32:06,465 | INFO     | mean x: 1716113106.0
[2024-05-19 14:32:22] 2024-05-19 12:32:06,465 | INFO     | mean y: 2338543.162629758
[2024-05-19 14:32:22] 2024-05-19 12:32:06,465 | INFO     | -- intersect: -11272386477.35893
[2024-05-19 14:32:22] 2024-05-19 12:32:06,465 | INFO     | intersect: -11272386477.35893
[2024-05-19 14:32:22] 2024-05-19 12:32:06,466 | INFO     | chi2: 2.339100440408356
[2024-05-19 14:32:22] 2024-05-19 12:32:06,466 | INFO     | current chi2=2.339100440408356 (change=50.25961622304757 %)
[2024-05-19 14:32:22] 2024-05-19 12:32:06,466 | INFO     | model: linear, x: [1716104627.0, 1716104688.0, 1716104749.0, 1716104810.0, 1716104871.0, 1716104932.0, 1716104993.0, 1716105054.0, 1716105115.0, 1716105176.0, 1716
[2024-05-19 14:32:22] 2024-05-19 12:32:06,466 | INFO     | sum of square deviations: 7102775035.0
[2024-05-19 14:32:22] 2024-05-19 12:32:06,468 | INFO     | sum of deviations: -6571040383.499998
[2024-05-19 14:32:22] 2024-05-19 12:32:06,468 | INFO     | mean x: 1716113258.5
[2024-05-19 14:32:22] 2024-05-19 12:32:06,469 | INFO     | mean y: 2360810.193661972
[2024-05-19 14:32:22] 2024-05-19 12:32:06,469 | INFO     | -- intersect: 1590000777.4875538
[2024-05-19 14:32:22] 2024-05-19 12:32:06,469 | INFO     | intersect: 1590000777.4875538
[2024-05-19 14:32:22] 2024-05-19 12:32:06,469 | INFO     | chi2: 0.8670752546882047
[2024-05-19 14:32:22] 2024-05-19 12:32:06,469 | INFO     | current chi2=0.8670752546882047 (change=62.931251702178635 %)
[2024-05-19 14:32:22] 2024-05-19 12:32:06,470 | INFO     | model: linear, x: [1716104932.0, 1716104993.0, 1716105054.0, 1716105115.0, 1716105176.0, 1716105237.0, 1716105298.0, 1716105359.0, 1716105420.0, 1716105481.0, 1716
[2024-05-19 14:32:22] 2024-05-19 12:32:06,470 | INFO     | sum of square deviations: 6734191380.0
[2024-05-19 14:32:22] 2024-05-19 12:32:06,472 | INFO     | sum of deviations: -13690717024.0
[2024-05-19 14:32:22] 2024-05-19 12:32:06,472 | INFO     | mean x: 1716113411.0
[2024-05-19 14:32:22] 2024-05-19 12:32:06,472 | INFO     | mean y: 2363734.1254480286
[2024-05-19 14:32:22] 2024-05-19 12:32:06,472 | INFO     | -- intersect: 3491249298.1547275
[2024-05-19 14:32:22] 2024-05-19 12:32:06,472 | INFO     | intersect: 3491249298.1547275
[2024-05-19 14:32:22] 2024-05-19 12:32:06,472 | INFO     | chi2: 0.8271991310474833
[2024-05-19 14:32:22] 2024-05-19 12:32:06,473 | INFO     | current chi2=0.8271991310474833 (change=4.59892303754656 %)
[2024-05-19 14:32:22] 2024-05-19 12:32:06,473 | INFO     | left removable region: 30
[2024-05-19 14:32:22] 2024-05-19 12:32:06,473 | INFO     | model: linear, x: [1716105847.0, 1716105908.0, 1716105969.0, 1716106030.0, 1716106091.0, 1716106152.0, 1716106213.0, 1716106274.0, 1716106335.0, 1716106396.0, 1716
[2024-05-19 14:32:22] 2024-05-19 12:32:06,473 | INFO     | sum of square deviations: 5325139844.5
[2024-05-19 14:32:22] 2024-05-19 12:32:06,475 | INFO     | sum of deviations: 5135214667.000001
[2024-05-19 14:32:22] 2024-05-19 12:32:06,475 | INFO     | mean x: 1716113685.5
[2024-05-19 14:32:22] 2024-05-19 12:32:06,475 | INFO     | mean y: 2370849.9457364343
[2024-05-19 14:32:22] 2024-05-19 12:32:06,475 | INFO     | -- intersect: -1652536330.9653933
[2024-05-19 14:32:22] 2024-05-19 12:32:06,475 | INFO     | intersect: -1652536330.9653933
[2024-05-19 14:32:22] 2024-05-19 12:32:06,475 | INFO     | chi2: 0.0017963955708128827
[2024-05-19 14:32:22] 2024-05-19 12:32:06,476 | INFO     | -- intersect: -1652536330.9653933
[2024-05-19 14:32:22] 2024-05-19 12:32:06,476 | INFO     | current memory leak: 0.96 B/s (using 258 data points, chi2=0.00)
[2024-05-19 14:32:22] 2024-05-19 12:32:06,476 | INFO     | ..............................
[2024-05-19 14:32:22] 2024-05-19 12:32:06,476 | INFO     | . Timing measurements:
[2024-05-19 14:32:22] 2024-05-19 12:32:06,476 | INFO     | . get job = 0 s
[2024-05-19 14:32:22] 2024-05-19 12:32:06,476 | INFO     | . initial setup = 1 s
[2024-05-19 14:32:22] 2024-05-19 12:32:06,476 | INFO     | . payload setup = 5 s
[2024-05-19 14:32:22] 2024-05-19 12:32:06,477 | INFO     | . stage-in = 0 s
[2024-05-19 14:32:22] 2024-05-19 12:32:06,477 | INFO     | . payload execution = 17901 s
[2024-05-19 14:32:22] 2024-05-19 12:32:06,477 | INFO     | . stage-out = 0 s
[2024-05-19 14:32:22] 2024-05-19 12:32:06,477 | INFO     | . log creation = 0 s
[2024-05-19 14:32:22] 2024-05-19 12:32:06,477 | INFO     | ..............................
[2024-05-19 14:32:22] 2024-05-19 12:32:06,548 | INFO     | 
[2024-05-19 14:32:22] 2024-05-19 12:32:06,548 | INFO     | job summary report
[2024-05-19 14:32:22] 2024-05-19 12:32:06,548 | INFO     | --------------------------------------------------
[2024-05-19 14:32:22] 2024-05-19 12:32:06,548 | INFO     | PanDA job id: 6208156310
[2024-05-19 14:32:22] 2024-05-19 12:32:06,549 | INFO     | task id: 38920995
[2024-05-19 14:32:22] 2024-05-19 12:32:06,549 | INFO     | errors: (none)
[2024-05-19 14:32:22] 2024-05-19 12:32:06,549 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 14:32:22] 2024-05-19 12:32:06,549 | INFO     | pilot state: finished 
[2024-05-19 14:32:22] 2024-05-19 12:32:06,549 | INFO     | transexitcode: 0
[2024-05-19 14:32:22] 2024-05-19 12:32:06,549 | INFO     | exeerrorcode: 0
[2024-05-19 14:32:22] 2024-05-19 12:32:06,549 | INFO     | exeerrordiag: 
[2024-05-19 14:32:22] 2024-05-19 12:32:06,549 | INFO     | exitcode: 0
[2024-05-19 14:32:22] 2024-05-19 12:32:06,549 | INFO     | exitmsg: OK
[2024-05-19 14:32:22] 2024-05-19 12:32:06,549 | INFO     | cpuconsumptiontime: 68668 s
[2024-05-19 14:32:22] 2024-05-19 12:32:06,549 | INFO     | nevents: 400
[2024-05-19 14:32:22] 2024-05-19 12:32:06,549 | INFO     | neventsw: 0
[2024-05-19 14:32:22] 2024-05-19 12:32:06,549 | INFO     | pid: 2626428
[2024-05-19 14:32:22] 2024-05-19 12:32:06,549 | INFO     | pgrp: 2626428
[2024-05-19 14:32:22] 2024-05-19 12:32:06,550 | INFO     | corecount: 4
[2024-05-19 14:32:22] 2024-05-19 12:32:06,550 | INFO     | event service: False
[2024-05-19 14:32:22] 2024-05-19 12:32:06,550 | INFO     | sizes: {0: 2392185, 5: 2392391, 11: 2392447, 17910: 2424700, 17912: 2433684, 17913: 2433740, 17920: 2434038}
[2024-05-19 14:32:22] 2024-05-19 12:32:06,550 | INFO     | --------------------------------------------------
[2024-05-19 14:32:22] 2024-05-19 12:32:06,550 | INFO     | 
[2024-05-19 14:32:22] 2024-05-19 12:32:06,550 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2024-05-19 14:32:22] 2024-05-19 12:32:06,574 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 14:32:22] 2024-05-19 12:32:06,574 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 14:32:22] 2024-05-19 12:32:06,574 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 14:32:22] 2024-05-19 12:32:06,574 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 14:32:22] 2024-05-19 12:32:06,574 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 14:32:22] 2024-05-19 12:32:06,575 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 14:32:22] 2024-05-19 12:32:06,575 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 14:32:22] 2024-05-19 12:32:06,575 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 14:32:22] 2024-05-19 12:32:06,575 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 14:32:22] 2024-05-19 12:32:06,575 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 14:32:22] 2024-05-19 12:32:06,575 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 14:32:22] 2024-05-19 12:32:06,575 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 14:32:22] 2024-05-19 12:32:06,575 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 14:32:22] 2024-05-19 12:32:06,575 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 14:32:22] 2024-05-19 12:32:06,575 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 14:32:22] 2024-05-19 12:32:06,575 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 14:32:22] 2024-05-19 12:32:06,575 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 14:32:22] 2024-05-19 12:32:06,575 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 14:32:22] 2024-05-19 12:32:06,575 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 14:32:22] 2024-05-19 12:32:06,575 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 14:32:22] 2024-05-19 12:32:06,576 | INFO     | job 6208156310 has completed (purged errors)
[2024-05-19 14:32:22] 2024-05-19 12:32:06,576 | INFO     | overall cleanup function is called
[2024-05-19 14:32:22] 2024-05-19 12:32:07,579 | INFO     | --- collectZombieJob: --- 10, [2626428]
[2024-05-19 14:32:22] 2024-05-19 12:32:07,580 | INFO     | zombie collector waiting for pid 2626428
[2024-05-19 14:32:22] 2024-05-19 12:32:07,580 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 14:32:22] 2024-05-19 12:32:08,585 | INFO     | collected zombie processes
[2024-05-19 14:32:22] 2024-05-19 12:32:08,585 | INFO     | will now attempt to kill all subprocesses of pid=2626428
[2024-05-19 14:32:22] 2024-05-19 12:32:08,777 | INFO     | process IDs to be killed: [2626428] (in reverse order)
[2024-05-19 14:32:22] 2024-05-19 12:32:08,919 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 14:32:22] 2024-05-19 12:32:08,919 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 14:32:22] 2024-05-19 12:32:08,934 | INFO     | did not find any defunct processes belonging to 2626428
[2024-05-19 14:32:22] 2024-05-19 12:32:08,944 | INFO     | did not find any defunct processes belonging to 2626428
[2024-05-19 14:32:22] 2024-05-19 12:32:08,945 | INFO     | ready for new job
[2024-05-19 14:32:22] 2024-05-19 12:32:08,945 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 14:32:22] 2024-05-19 12:32:08,947 | INFO     | *************************************
[2024-05-19 14:32:22] 2024-05-19 12:32:08,947 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 14:32:22] 2024-05-19 12:32:08,947 | INFO     | *************************************
[2024-05-19 14:32:22] 2024-05-19 12:32:08,947 | INFO     | 
[2024-05-19 14:32:22] 2024-05-19 12:32:08,952 | INFO     | architecture information:
[2024-05-19 14:32:22] 2024-05-19 12:32:08,952 | INFO     | executing command: cat /etc/os-release
[2024-05-19 14:32:22] 2024-05-19 12:32:08,969 | INFO     | cat /etc/os-release:
[2024-05-19 14:32:22] NAME="CentOS Linux"
[2024-05-19 14:32:22] VERSION="7 (Core)"
[2024-05-19 14:32:22] ID="centos"
[2024-05-19 14:32:22] ID_LIKE="rhel fedora"
[2024-05-19 14:32:22] VERSION_ID="7"
[2024-05-19 14:32:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 14:32:22] ANSI_COLOR="0;31"
[2024-05-19 14:32:22] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 14:32:22] HOME_URL="https://www.centos.org/"
[2024-05-19 14:32:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 14:32:22] 
[2024-05-19 14:32:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 14:32:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 14:32:22] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 14:32:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 14:32:22] 
[2024-05-19 14:32:22] 2024-05-19 12:32:08,969 | INFO     | *************************************
[2024-05-19 14:32:22] 2024-05-19 12:32:09,472 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2024-05-19 14:32:22] 2024-05-19 12:32:09,494 | INFO     | sufficient remaining disk space (2968546967552 B)
[2024-05-19 14:32:22] 2024-05-19 12:32:09,494 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 14:32:22] 2024-05-19 12:32:09,494 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 14:32:22] 2024-05-19 12:32:09,543 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 14:32:22] 2024-05-19 12:32:09,544 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 14:32:22] 2024-05-19 12:32:09,544 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 14:32:22] 2024-05-19 12:32:09,681 | INFO     | all data control threads have been joined
[2024-05-19 14:32:22] 2024-05-19 12:32:09,737 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 14:32:22] 2024-05-19 12:32:10,125 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 14:32:22] 2024-05-19 12:32:10,125 | INFO     | aborting loop
[2024-05-19 14:32:22] 2024-05-19 12:32:10,470 | INFO     | all payload control threads have been joined
[2024-05-19 14:32:22] 2024-05-19 12:32:10,475 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 14:32:22] 2024-05-19 12:32:10,499 | INFO     | [job] retrieve thread has finished
[2024-05-19 14:32:22] 2024-05-19 12:32:10,510 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 14:32:22] 2024-05-19 12:32:10,685 | INFO     | [data] control thread has finished
[2024-05-19 14:32:22] 2024-05-19 12:32:10,686 | INFO     | all job control threads have been joined
[2024-05-19 14:32:22] 2024-05-19 12:32:10,829 | INFO     | [payload] validate_post thread has finished
[2024-05-19 14:32:22] 2024-05-19 12:32:11,130 | INFO     | [job] job monitor thread has finished
[2024-05-19 14:32:22] 2024-05-19 12:32:11,225 | INFO     | [payload] failed_post thread has finished
[2024-05-19 14:32:22] 2024-05-19 12:32:11,339 | INFO     | [data] copytool_in thread has finished
[2024-05-19 14:32:22] 2024-05-19 12:32:11,474 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 14:32:22] 2024-05-19 12:32:11,476 | INFO     | [payload] control thread has finished
[2024-05-19 14:32:22] 2024-05-19 12:32:11,557 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 14:32:22] 2024-05-19 12:32:11,691 | INFO     | [job] control thread has finished
[2024-05-19 14:32:22] 2024-05-19 12:32:11,696 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 14:32:22] 2024-05-19 12:32:11,742 | INFO     | [data] copytool_out thread has finished
[2024-05-19 14:32:22] 2024-05-19 12:32:11,834 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 14:32:22] 2024-05-19 12:32:11,959 | INFO     | [job] validate thread has finished
[2024-05-19 14:32:22] 2024-05-19 12:32:12,561 | INFO     | [job] queue monitor thread has finished
[2024-05-19 14:32:22] 2024-05-19 12:32:14,481 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 14:32:22] 2024-05-19 12:32:16,099 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47695449506880)>', '<ExcThread(monitor, started 47695760746240)>']
[2024-05-19 14:32:22] 2024-05-19 12:32:16,578 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 14:32:22] 2024-05-19 12:32:16,578 | INFO     | [monitor] control thread has ended
[2024-05-19 14:32:22] 2024-05-19 12:32:21,124 | INFO     | all workflow threads have been joined
[2024-05-19 14:32:22] 2024-05-19 12:32:21,124 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 14:32:22] 2024-05-19 12:32:21,125 | INFO     | traces error code: 0
[2024-05-19 14:32:22] 2024-05-19 12:32:21,125 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 14:32:22] 2024-05-19 12:32:21,229 [wrapper] ==== pilot stdout END ====
[2024-05-19 14:32:22] 2024-05-19 12:32:21,235 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 14:32:22] 2024-05-19 12:32:21,241 [wrapper] pilotpid: 2618785
[2024-05-19 14:32:22] 2024-05-19 12:32:21,249 [wrapper] Pilot exit status: 0
[2024-05-19 14:32:22] 2024-05-19 12:32:21,270 [wrapper] pandaids: 6208156310
[2024-05-19 14:32:22] 2024-05-19 12:32:21,364 [wrapper] cleanup: SIGTERM to supervisor_pilot    5374 2618786
[2024-05-19 14:32:22] 2024-05-19 12:32:21,366 [wrapper] Test setup, not cleaning
[2024-05-19 14:32:22] 2024-05-19 12:32:21,368 [wrapper] ==== wrapper stdout END ====
[2024-05-19 14:32:22] 2024-05-19 12:32:21,372 [wrapper] ==== wrapper stderr END ====
[2024-05-19 14:32:22] 2024-05-19 12:32:21,382 [wrapper] apfmon messages muted
[2024-05-19 14:32:22]  *** Error codes and diagnostics ***
[2024-05-19 14:32:22]     "exeErrorCode": 0,
[2024-05-19 14:32:22]     "exeErrorDiag": "",
[2024-05-19 14:32:22]     "pilotErrorCode": 0,
[2024-05-19 14:32:22]     "pilotErrorDiag": "",
[2024-05-19 14:32:22]  *** Listing of results directory ***
[2024-05-19 14:32:22] total 971128
[2024-05-19 14:32:22] -rw-r--r-- 1 boinc boinc    467845 May 17 17:43 pilot3.tar.gz
[2024-05-19 14:32:22] -rw-r--r-- 1 boinc boinc      5633 May 17 18:04 queuedata.json
[2024-05-19 14:32:22] -rwx------ 1 boinc boinc     32251 May 17 18:05 runpilot2-wrapper.sh
[2024-05-19 14:32:22] -rw-r--r-- 1 boinc boinc       100 May 19 09:32 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 14:32:22] -rwxr-xr-x 1 boinc boinc      7986 May 19 09:32 run_atlas
[2024-05-19 14:32:22] -rw-r--r-- 1 boinc boinc       105 May 19 09:32 job.xml
[2024-05-19 14:32:22] -rw-r--r-- 2 boinc boinc 631909035 May 19 09:32 EVNT.38776180._000066.pool.root.1
[2024-05-19 14:32:22] -rw-r--r-- 2 boinc boinc     17537 May 19 09:32 start_atlas.sh
[2024-05-19 14:32:22] drwxrwx--x 2 boinc boinc      4096 May 19 09:32 shared
[2024-05-19 14:32:22] -rw-r--r-- 2 boinc boinc    480010 May 19 09:32 input.tar.gz
[2024-05-19 14:32:22] -rw-r--r-- 1 boinc boinc      6646 May 19 09:32 init_data.xml
[2024-05-19 14:32:22] -rw-r--r-- 1 boinc boinc         0 May 19 09:32 boinc_lockfile
[2024-05-19 14:32:22] -rw-r--r-- 1 boinc boinc      2613 May 19 09:32 pandaJob.out
[2024-05-19 14:32:22] -rw------- 1 boinc boinc       424 May 19 09:33 setup.sh.local
[2024-05-19 14:32:22] -rw------- 1 boinc boinc   1013987 May 19 09:33 agis_schedconf.cvmfs.json
[2024-05-19 14:32:22] -rw------- 1 boinc boinc   1324701 May 19 09:33 cric_ddmendpoints.json
[2024-05-19 14:32:22] drwx------ 4 boinc boinc      4096 May 19 09:33 pilot3
[2024-05-19 14:32:22] -rw------- 1 boinc boinc 354348434 May 19 14:31 HITS.38920995._004954.pool.root.1
[2024-05-19 14:32:22] -rw-r--r-- 1 boinc boinc       531 May 19 14:31 boinc_task_state.xml
[2024-05-19 14:32:22] -rw------- 1 boinc boinc      1044 May 19 14:31 memory_monitor_summary.json
[2024-05-19 14:32:22] -rw------- 1 boinc boinc         0 May 19 14:31 agis_ddmendpoints.agis.ALL.json
[2024-05-19 14:32:22] -rw------- 1 boinc boinc    385110 May 19 14:31 log.38920995._004954.job.log.tgz.1
[2024-05-19 14:32:22] -rw------- 1 boinc boinc        95 May 19 14:31 pilot_heartbeat.json
[2024-05-19 14:32:22] -rw-r--r-- 1 boinc boinc      8192 May 19 14:32 boinc_mmap_file
[2024-05-19 14:32:22] -rw-r--r-- 1 boinc boinc        28 May 19 14:32 wrapper_checkpoint.txt
[2024-05-19 14:32:22] -rw------- 1 boinc boinc      7720 May 19 14:32 heartbeat.json
[2024-05-19 14:32:22] -rw------- 1 boinc boinc      4223 May 19 14:32 pilotlog.txt
[2024-05-19 14:32:22] -rw------- 1 boinc boinc   1937206 May 19 14:32 log.38920995._004954.job.log.1
[2024-05-19 14:32:22] -rw------- 1 boinc boinc       357 May 19 14:32 output.list
[2024-05-19 14:32:22] -rw-r--r-- 1 boinc boinc       620 May 19 14:32 runtime_log
[2024-05-19 14:32:22] -rw------- 1 boinc boinc   2344960 May 19 14:32 result.tar.gz
[2024-05-19 14:32:22] -rw-r--r-- 1 boinc boinc     11429 May 19 14:32 runtime_log.err
[2024-05-19 14:32:22] -rw------- 1 boinc boinc       658 May 19 14:32 NQvLDmzFFS5n9Rq4apoT9bVoABFKDmABFKDmlqFKDm1KLKDmNDwsQo.diag
[2024-05-19 14:32:22] -rw-r--r-- 1 boinc boinc     21285 May 19 14:32 stderr.txt
[2024-05-19 14:32:22] HITS file was successfully produced:
[2024-05-19 14:32:22] -rw------- 1 boinc boinc 354348434 May 19 14:31 shared/HITS.pool.root.1
[2024-05-19 14:32:22]  *** Contents of shared directory: ***
[2024-05-19 14:32:22] total 965936
[2024-05-19 14:32:22] -rw-r--r-- 2 boinc boinc 631909035 May 19 09:32 ATLAS.root_0
[2024-05-19 14:32:22] -rw-r--r-- 2 boinc boinc     17537 May 19 09:32 start_atlas.sh
[2024-05-19 14:32:22] -rw-r--r-- 2 boinc boinc    480010 May 19 09:32 input.tar.gz
[2024-05-19 14:32:22] -rw------- 1 boinc boinc 354348434 May 19 14:31 HITS.pool.root.1
[2024-05-19 14:32:22] -rw------- 1 boinc boinc   2344960 May 19 14:32 result.tar.gz
14:32:23 (2614007): run_atlas exited; CPU time 68236.339183
14:32:23 (2614007): called boinc_finish(0)

</stderr_txt>
]]>

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