Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
19:35:50 (94260): wrapper (7.7.26015): starting
19:35:50 (94260): wrapper: running run_atlas (--nthreads 12)
[2024-05-17 19:35:50] Arguments: --nthreads 12
[2024-05-17 19:35:50] Threads: 12
[2024-05-17 19:35:50] Checking for CVMFS
[2024-05-17 19:35:50] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 19:35:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 19:35:51] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 19:35:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 19:35:51] 2.10.1.0 276469 184328 143912 132863 1 59 33360006 45568001 3811 130560 0 627955318 99.753 414400933 3033 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-05-17 19:35:51] CVMFS is ok
[2024-05-17 19:35:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 19:35:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 19:35:51] Further information can be found at the LHC@home message board.
[2024-05-17 19:35:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 19:35:51] Checking for apptainer binary...
[2024-05-17 19:35:51] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 19:35:51] Running /usr/bin/apptainer --version
[2024-05-17 19:35:51] apptainer version 1.1.8-1.el7
[2024-05-17 19:35:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 19:35:52] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0025.triumf.lcg
[2024-05-17 19:35:52] apptainer works
[2024-05-17 19:35:52] Set ATHENA_PROC_NUMBER=12
[2024-05-17 19:35:52] Set ATHENA_CORE_NUMBER=12
[2024-05-17 19:35:52] Starting ATLAS job with PandaID=6208140384
[2024-05-17 19:35:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 20:24:52]  *** The last 200 lines of the pilot log: ***
[2024-05-17 20:24:52]  filesize=354514
[2024-05-17 20:24:52]  filetype=log
[2024-05-17 20:24:52]  guid=3242e085-c90d-487c-9721-86b9018ff5a5
[2024-05-17 20:24:52]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-17 20:24:52]  is_tar=False
[2024-05-17 20:24:52]  lfn=log.38776104._013267.job.log.tgz.1
[2024-05-17 20:24:52]  mtime=0
[2024-05-17 20:24:52]  protocol_id=None
[2024-05-17 20:24:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-17 20:24:52]  replicas=None
[2024-05-17 20:24:52]  scope=mc23_13p6TeV
[2024-05-17 20:24:52]  status=None
[2024-05-17 20:24:52]  status_code=0
[2024-05-17 20:24:52]  storage_token=
[2024-05-17 20:24:52]  surl=/home/boinc/slots/0/PanDA_Pilot-6208140384/log.38776104._013267.job.log.tgz.1
[2024-05-17 20:24:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/db/log.38776104._013267.job.log.tgz.1
[2024-05-17 20:24:52]  workdir=None
[2024-05-17 20:24:52] ]
[2024-05-17 20:24:52] 2024-05-18 03:24:29,432 | INFO     | transferring file log.38776104._013267.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6208140384/log.38776104._013267.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-17 20:24:52] 2024-05-18 03:24:29,432 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6208140384/log.38776104._013267.job.log.tgz.1 /home/boinc/slots/0/log.38776104._013267.job.log.t
[2024-05-17 20:24:52] 2024-05-18 03:24:29,460 | INFO     | adding to output.list: log.38776104._013267.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/db/log.38776104._013267.job.log.tg
[2024-05-17 20:24:52] 2024-05-18 03:24:29,460 | INFO     | summary of transferred files:
[2024-05-17 20:24:52] 2024-05-18 03:24:29,460 | INFO     |  -- lfn=log.38776104._013267.job.log.tgz.1, status_code=0, status=transferred
[2024-05-17 20:24:52] 2024-05-18 03:24:29,461 | INFO     | stage-out finished correctly
[2024-05-17 20:24:52] 2024-05-18 03:24:29,847 | INFO     | monitor loop #233: job 0:6208140384 is in state 'finished'
[2024-05-17 20:24:52] 2024-05-18 03:24:29,848 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 20:24:52] 2024-05-18 03:24:30,849 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-17 20:24:52] 2024-05-18 03:24:30,942 | INFO     | job 6208140384 has state=finished
[2024-05-17 20:24:52] 2024-05-18 03:24:30,942 | INFO     | preparing for final server update for job 6208140384 in state='finished'
[2024-05-17 20:24:52] 2024-05-18 03:24:30,943 | INFO     | this job has now completed (state=finished)
[2024-05-17 20:24:52] 2024-05-18 03:24:30,943 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-17 20:24:52] 2024-05-18 03:24:30,944 | INFO     | job 6208140384 has finished - writing final server update
[2024-05-17 20:24:52] 2024-05-18 03:24:30,944 | INFO     | total number of processed events: 400 (read)
[2024-05-17 20:24:52] 2024-05-18 03:24:30,951 | INFO     | executing command: lscpu
[2024-05-17 20:24:52] 2024-05-18 03:24:31,019 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-17 20:24:52] 2024-05-18 03:24:31,020 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-17 20:24:52] 2024-05-18 03:24:31,084 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-17 20:24:52] 2024-05-18 03:24:32,351 | INFO     | monitor loop #234: job 0:6208140384 is in state 'finished'
[2024-05-17 20:24:52] 2024-05-18 03:24:32,351 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 20:24:52] 2024-05-18 03:24:34,855 | INFO     | monitor loop #235: job 0:6208140384 is in state 'finished'
[2024-05-17 20:24:52] 2024-05-18 03:24:34,855 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 20:24:52] 2024-05-18 03:24:35,465 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-17 20:24:52] 2024-05-18 03:24:35,466 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6208140384/memory_monitor_summary.json (trf name=prmon)
[2024-05-17 20:24:52] 2024-05-18 03:24:35,467 | INFO     | extracted standard info from prmon json
[2024-05-17 20:24:52] 2024-05-18 03:24:35,467 | INFO     | extracted standard memory fields from prmon json
[2024-05-17 20:24:52] 2024-05-18 03:24:35,468 | WARNING  | GPU info not found in prmon json
[2024-05-17 20:24:52] 2024-05-18 03:24:35,468 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-17 20:24:52] 2024-05-18 03:24:35,468 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 20:24:52] 2024-05-18 03:24:35,470 | INFO     | fitting pss+swap vs Time
[2024-05-17 20:24:52] 2024-05-18 03:24:35,471 | INFO     | model: linear, x: [1716000094.0, 1716000155.0, 1716000216.0, 1716000277.0, 1716000338.0, 1716000399.0, 1716000460.0, 1716000521.0, 1716000582.0, 1716000643.0, 1716
[2024-05-17 20:24:52] 2024-05-18 03:24:35,471 | INFO     | sum of square deviations: 21358540.0
[2024-05-17 20:24:52] 2024-05-18 03:24:35,471 | INFO     | sum of deviations: 12861840666.999998
[2024-05-17 20:24:52] 2024-05-18 03:24:35,472 | INFO     | mean x: 1716001314.0
[2024-05-17 20:24:52] 2024-05-18 03:24:35,472 | INFO     | mean y: 2586743.951219512
[2024-05-17 20:24:52] 2024-05-18 03:24:35,472 | INFO     | -- intersect: -1033351541629.5535
[2024-05-17 20:24:52] 2024-05-18 03:24:35,472 | INFO     | intersect: -1033351541629.5535
[2024-05-17 20:24:52] 2024-05-18 03:24:35,472 | INFO     | chi2: 2.0377892740926966
[2024-05-17 20:24:52] 2024-05-18 03:24:35,472 | INFO     | -- intersect: -1033351541629.5535
[2024-05-17 20:24:52] 2024-05-18 03:24:35,473 | INFO     | current memory leak: 602.19 B/s (using 41 data points, chi2=2.04)
[2024-05-17 20:24:52] 2024-05-18 03:24:35,473 | INFO     | ..............................
[2024-05-17 20:24:52] 2024-05-18 03:24:35,473 | INFO     | . Timing measurements:
[2024-05-17 20:24:52] 2024-05-18 03:24:35,473 | INFO     | . get job = 0 s
[2024-05-17 20:24:52] 2024-05-18 03:24:35,474 | INFO     | . initial setup = 2 s
[2024-05-17 20:24:52] 2024-05-18 03:24:35,474 | INFO     | . payload setup = 6 s
[2024-05-17 20:24:52] 2024-05-18 03:24:35,474 | INFO     | . stage-in = 0 s
[2024-05-17 20:24:52] 2024-05-18 03:24:35,474 | INFO     | . payload execution = 2879 s
[2024-05-17 20:24:52] 2024-05-18 03:24:35,474 | INFO     | . stage-out = 0 s
[2024-05-17 20:24:52] 2024-05-18 03:24:35,474 | INFO     | . log creation = 0 s
[2024-05-17 20:24:52] 2024-05-18 03:24:35,474 | INFO     | ..............................
[2024-05-17 20:24:52] 2024-05-18 03:24:35,568 | INFO     | 
[2024-05-17 20:24:52] 2024-05-18 03:24:35,568 | INFO     | job summary report
[2024-05-17 20:24:52] 2024-05-18 03:24:35,569 | INFO     | --------------------------------------------------
[2024-05-17 20:24:52] 2024-05-18 03:24:35,569 | INFO     | PanDA job id: 6208140384
[2024-05-17 20:24:52] 2024-05-18 03:24:35,569 | INFO     | task id: 38776104
[2024-05-17 20:24:52] 2024-05-18 03:24:35,569 | INFO     | errors: (none)
[2024-05-17 20:24:52] 2024-05-18 03:24:35,569 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 20:24:52] 2024-05-18 03:24:35,569 | INFO     | pilot state: finished 
[2024-05-17 20:24:52] 2024-05-18 03:24:35,569 | INFO     | transexitcode: 0
[2024-05-17 20:24:52] 2024-05-18 03:24:35,569 | INFO     | exeerrorcode: 0
[2024-05-17 20:24:52] 2024-05-18 03:24:35,570 | INFO     | exeerrordiag: 
[2024-05-17 20:24:52] 2024-05-18 03:24:35,570 | INFO     | exitcode: 0
[2024-05-17 20:24:52] 2024-05-18 03:24:35,570 | INFO     | exitmsg: OK
[2024-05-17 20:24:52] 2024-05-18 03:24:35,570 | INFO     | cpuconsumptiontime: 23650 s
[2024-05-17 20:24:52] 2024-05-18 03:24:35,570 | INFO     | nevents: 400
[2024-05-17 20:24:52] 2024-05-18 03:24:35,570 | INFO     | neventsw: 0
[2024-05-17 20:24:52] 2024-05-18 03:24:35,570 | INFO     | pid: 104886
[2024-05-17 20:24:52] 2024-05-18 03:24:35,570 | INFO     | pgrp: 104886
[2024-05-17 20:24:52] 2024-05-18 03:24:35,570 | INFO     | corecount: 12
[2024-05-17 20:24:52] 2024-05-18 03:24:35,571 | INFO     | event service: False
[2024-05-17 20:24:52] 2024-05-18 03:24:35,571 | INFO     | sizes: {0: 2390687, 1: 2392220, 6: 2392426, 12: 2392454, 2888: 2417765, 2889: 2417764, 2890: 2426902, 2892: 2426958, 2896: 2427128}
[2024-05-17 20:24:52] 2024-05-18 03:24:35,571 | INFO     | --------------------------------------------------
[2024-05-17 20:24:52] 2024-05-18 03:24:35,571 | INFO     | 
[2024-05-17 20:24:52] 2024-05-18 03:24:35,571 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-17 20:24:52] 2024-05-18 03:24:35,602 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 20:24:52] 2024-05-18 03:24:35,602 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 20:24:52] 2024-05-18 03:24:35,602 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 20:24:52] 2024-05-18 03:24:35,602 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 20:24:52] 2024-05-18 03:24:35,602 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 20:24:52] 2024-05-18 03:24:35,603 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 20:24:52] 2024-05-18 03:24:35,603 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 20:24:52] 2024-05-18 03:24:35,603 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 20:24:52] 2024-05-18 03:24:35,603 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 20:24:52] 2024-05-18 03:24:35,603 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 20:24:52] 2024-05-18 03:24:35,603 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 20:24:52] 2024-05-18 03:24:35,603 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 20:24:52] 2024-05-18 03:24:35,603 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 20:24:52] 2024-05-18 03:24:35,604 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 20:24:52] 2024-05-18 03:24:35,604 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 20:24:52] 2024-05-18 03:24:35,604 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 20:24:52] 2024-05-18 03:24:35,604 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 20:24:52] 2024-05-18 03:24:35,604 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 20:24:52] 2024-05-18 03:24:35,604 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 20:24:52] 2024-05-18 03:24:35,604 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 20:24:52] 2024-05-18 03:24:35,604 | INFO     | job 6208140384 has completed (purged errors)
[2024-05-17 20:24:52] 2024-05-18 03:24:35,605 | INFO     | overall cleanup function is called
[2024-05-17 20:24:52] 2024-05-18 03:24:36,614 | INFO     | --- collectZombieJob: --- 10, [104886]
[2024-05-17 20:24:52] 2024-05-18 03:24:36,614 | INFO     | zombie collector waiting for pid 104886
[2024-05-17 20:24:52] 2024-05-18 03:24:36,614 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 20:24:52] 2024-05-18 03:24:37,620 | INFO     | collected zombie processes
[2024-05-17 20:24:52] 2024-05-18 03:24:37,620 | INFO     | will now attempt to kill all subprocesses of pid=104886
[2024-05-17 20:24:52] 2024-05-18 03:24:37,739 | INFO     | process IDs to be killed: [104886] (in reverse order)
[2024-05-17 20:24:52] 2024-05-18 03:24:37,854 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 20:24:52] 2024-05-18 03:24:37,855 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 20:24:52] 2024-05-18 03:24:37,863 | INFO     | did not find any defunct processes belonging to 104886
[2024-05-17 20:24:52] 2024-05-18 03:24:37,869 | INFO     | did not find any defunct processes belonging to 104886
[2024-05-17 20:24:52] 2024-05-18 03:24:37,869 | INFO     | ready for new job
[2024-05-17 20:24:52] 2024-05-18 03:24:37,870 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 20:24:52] 2024-05-18 03:24:37,871 | INFO     | *************************************
[2024-05-17 20:24:52] 2024-05-18 03:24:37,872 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 20:24:52] 2024-05-18 03:24:37,872 | INFO     | *************************************
[2024-05-17 20:24:52] 2024-05-18 03:24:37,872 | INFO     | 
[2024-05-17 20:24:52] 2024-05-18 03:24:37,876 | INFO     | architecture information:
[2024-05-17 20:24:52] 2024-05-18 03:24:37,877 | INFO     | executing command: cat /etc/os-release
[2024-05-17 20:24:52] 2024-05-18 03:24:37,900 | INFO     | cat /etc/os-release:
[2024-05-17 20:24:52] NAME="CentOS Linux"
[2024-05-17 20:24:52] VERSION="7 (Core)"
[2024-05-17 20:24:52] ID="centos"
[2024-05-17 20:24:52] ID_LIKE="rhel fedora"
[2024-05-17 20:24:52] VERSION_ID="7"
[2024-05-17 20:24:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 20:24:52] ANSI_COLOR="0;31"
[2024-05-17 20:24:52] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 20:24:52] HOME_URL="https://www.centos.org/"
[2024-05-17 20:24:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 20:24:52] 
[2024-05-17 20:24:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 20:24:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 20:24:52] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 20:24:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 20:24:52] 
[2024-05-17 20:24:52] 2024-05-18 03:24:37,900 | INFO     | *************************************
[2024-05-17 20:24:52] 2024-05-18 03:24:38,403 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-17 20:24:52] 2024-05-18 03:24:38,428 | INFO     | sufficient remaining disk space (2234499727360 B)
[2024-05-17 20:24:52] 2024-05-18 03:24:38,428 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 20:24:52] 2024-05-18 03:24:38,429 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 20:24:52] 2024-05-18 03:24:38,429 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 20:24:52] 2024-05-18 03:24:38,429 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 20:24:52] 2024-05-18 03:24:38,430 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-17 20:24:52] 2024-05-18 03:24:38,430 | INFO     | aborting loop
[2024-05-17 20:24:52] 2024-05-18 03:24:38,431 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 20:24:52] 2024-05-18 03:24:38,431 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 20:24:52] 2024-05-18 03:24:38,431 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 20:24:52] 2024-05-18 03:24:38,469 | INFO     | all payload control threads have been joined
[2024-05-17 20:24:52] 2024-05-18 03:24:38,471 | INFO     | all data control threads have been joined
[2024-05-17 20:24:52] 2024-05-18 03:24:39,435 | INFO     | [job] retrieve thread has finished
[2024-05-17 20:24:52] 2024-05-18 03:24:39,437 | INFO     | [job] job monitor thread has finished
[2024-05-17 20:24:52] 2024-05-18 03:24:39,475 | INFO     | [payload] control thread has finished
[2024-05-17 20:24:52] 2024-05-18 03:24:39,477 | INFO     | [data] control thread has finished
[2024-05-17 20:24:52] 2024-05-18 03:24:39,551 | INFO     | [job] validate thread has finished
[2024-05-17 20:24:52] 2024-05-18 03:24:39,557 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 20:24:52] 2024-05-18 03:24:39,647 | INFO     | [payload] failed_post thread has finished
[2024-05-17 20:24:52] 2024-05-18 03:24:39,696 | INFO     | all job control threads have been joined
[2024-05-17 20:24:52] 2024-05-18 03:24:39,852 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 20:24:52] 2024-05-18 03:24:40,058 | INFO     | [data] copytool_in thread has finished
[2024-05-17 20:24:52] 2024-05-18 03:24:40,438 | INFO     | [data] copytool_out thread has finished
[2024-05-17 20:24:52] 2024-05-18 03:24:40,482 | INFO     | [payload] validate_post thread has finished
[2024-05-17 20:24:52] 2024-05-18 03:24:40,577 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 20:24:52] 2024-05-18 03:24:40,654 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 20:24:52] 2024-05-18 03:24:40,702 | INFO     | [job] control thread has finished
[2024-05-17 20:24:52] 2024-05-18 03:24:40,742 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 20:24:52] 2024-05-18 03:24:41,455 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 20:24:52] 2024-05-18 03:24:41,583 | INFO     | [job] queue monitor thread has finished
[2024-05-17 20:24:52] 2024-05-18 03:24:45,462 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 20:24:52] 2024-05-18 03:24:46,737 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140533992785728)>', '<ExcThread(monitor, started 140533712271104)>']
[2024-05-17 20:24:52] 2024-05-18 03:24:47,482 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 20:24:52] 2024-05-18 03:24:47,482 | INFO     | [monitor] control thread has ended
[2024-05-17 20:24:52] 2024-05-18 03:24:51,763 | INFO     | all workflow threads have been joined
[2024-05-17 20:24:52] 2024-05-18 03:24:51,763 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 20:24:52] 2024-05-18 03:24:51,764 | INFO     | traces error code: 0
[2024-05-17 20:24:52] 2024-05-18 03:24:51,764 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 20:24:52] 2024-05-18 03:24:51,860 [wrapper] ==== pilot stdout END ====
[2024-05-17 20:24:52] 2024-05-18 03:24:51,865 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 20:24:52] 2024-05-18 03:24:51,869 [wrapper] pilotpid: 98443
[2024-05-17 20:24:52] 2024-05-18 03:24:51,873 [wrapper] Pilot exit status: 0
[2024-05-17 20:24:52] 2024-05-18 03:24:51,888 [wrapper] pandaids: 6208140384
[2024-05-17 20:24:52] 2024-05-18 03:24:51,959 [wrapper] cleanup: SIGTERM to supervisor_pilot 137729 98444
[2024-05-17 20:24:52] 2024-05-18 03:24:51,963 [wrapper] Test setup, not cleaning
[2024-05-17 20:24:52] 2024-05-18 03:24:51,967 [wrapper] ==== wrapper stdout END ====
[2024-05-17 20:24:52] 2024-05-18 03:24:51,971 [wrapper] ==== wrapper stderr END ====
[2024-05-17 20:24:52] 2024-05-18 03:24:51,978 [wrapper] apfmon messages muted
[2024-05-17 20:24:52]  *** Error codes and diagnostics ***
[2024-05-17 20:24:52]     "exeErrorCode": 0,
[2024-05-17 20:24:52]     "exeErrorDiag": "",
[2024-05-17 20:24:52]     "pilotErrorCode": 0,
[2024-05-17 20:24:52]     "pilotErrorDiag": "",
[2024-05-17 20:24:52]  *** Listing of results directory ***
[2024-05-17 20:24:52] total 820704
[2024-05-17 20:24:52] -rw-r--r-- 1 boinc boinc    467845 May 17 07:57 pilot3.tar.gz
[2024-05-17 20:24:52] -rw-r--r-- 1 boinc boinc      5633 May 17 08:18 queuedata.json
[2024-05-17 20:24:52] -rwx------ 1 boinc boinc     32251 May 17 08:20 runpilot2-wrapper.sh
[2024-05-17 20:24:52] -rw-r--r-- 1 boinc boinc       100 May 17 19:35 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 20:24:52] -rwxr-xr-x 1 boinc boinc      7986 May 17 19:35 run_atlas
[2024-05-17 20:24:52] -rw-r--r-- 1 boinc boinc       105 May 17 19:35 job.xml
[2024-05-17 20:24:52] -rw-r--r-- 2 boinc boinc 608550840 May 17 19:35 EVNT.38776100._000006.pool.root.1
[2024-05-17 20:24:52] -rw-r--r-- 2 boinc boinc     17537 May 17 19:35 start_atlas.sh
[2024-05-17 20:24:52] drwxrwx--x 2 boinc boinc      4096 May 17 19:35 shared
[2024-05-17 20:24:52] -rw-r--r-- 2 boinc boinc    480009 May 17 19:35 input.tar.gz
[2024-05-17 20:24:52] -rw-r--r-- 1 boinc boinc      6625 May 17 19:35 init_data.xml
[2024-05-17 20:24:52] -rw-r--r-- 1 boinc boinc         0 May 17 19:35 boinc_lockfile
[2024-05-17 20:24:52] -rw-r--r-- 1 boinc boinc      2638 May 17 19:35 pandaJob.out
[2024-05-17 20:24:52] -rw------- 1 boinc boinc       424 May 17 19:35 setup.sh.local
[2024-05-17 20:24:52] -rw------- 1 boinc boinc   1019073 May 17 19:36 agis_schedconf.cvmfs.json
[2024-05-17 20:24:52] -rw------- 1 boinc boinc         0 May 17 19:36 agis_ddmendpoints.agis.ALL.json
[2024-05-17 20:24:52] -rw------- 1 boinc boinc   1324701 May 17 19:36 cric_ddmendpoints.json
[2024-05-17 20:24:52] drwx------ 4 boinc boinc      4096 May 17 19:36 pilot3
[2024-05-17 20:24:52] -rw------- 1 boinc boinc 226986678 May 17 20:23 HITS.38776104._013267.pool.root.1
[2024-05-17 20:24:52] -rw------- 1 boinc boinc        95 May 17 20:24 pilot_heartbeat.json
[2024-05-17 20:24:52] -rw-r--r-- 1 boinc boinc       530 May 17 20:24 boinc_task_state.xml
[2024-05-17 20:24:52] -rw------- 1 boinc boinc      1044 May 17 20:24 memory_monitor_summary.json
[2024-05-17 20:24:52] -rw------- 1 boinc boinc    354514 May 17 20:24 log.38776104._013267.job.log.tgz.1
[2024-05-17 20:24:52] -rw------- 1 boinc boinc      7756 May 17 20:24 heartbeat.json
[2024-05-17 20:24:52] -rw-r--r-- 1 boinc boinc        27 May 17 20:24 wrapper_checkpoint.txt
[2024-05-17 20:24:52] -rw-r--r-- 1 boinc boinc      8192 May 17 20:24 boinc_mmap_file
[2024-05-17 20:24:52] -rw------- 1 boinc boinc      4333 May 17 20:24 pilotlog.txt
[2024-05-17 20:24:52] -rw------- 1 boinc boinc    310321 May 17 20:24 log.38776104._013267.job.log.1
[2024-05-17 20:24:52] -rw------- 1 boinc boinc       357 May 17 20:24 output.list
[2024-05-17 20:24:52] -rw-r--r-- 1 boinc boinc       620 May 17 20:24 runtime_log
[2024-05-17 20:24:52] -rw------- 1 boinc boinc    686080 May 17 20:24 result.tar.gz
[2024-05-17 20:24:52] -rw-r--r-- 1 boinc boinc     11286 May 17 20:24 runtime_log.err
[2024-05-17 20:24:52] -rw------- 1 boinc boinc       651 May 17 20:24 kJMNDmFZES5nsSi4apGgGQJmABFKDmABFKDm4ySLDmrDRKDmbM0qrm.diag
[2024-05-17 20:24:52] -rw-r--r-- 1 boinc boinc     21681 May 17 20:24 stderr.txt
[2024-05-17 20:24:52] HITS file was successfully produced:
[2024-05-17 20:24:52] -rw------- 1 boinc boinc 226986678 May 17 20:23 shared/HITS.pool.root.1
[2024-05-17 20:24:52]  *** Contents of shared directory: ***
[2024-05-17 20:24:52] total 817128
[2024-05-17 20:24:52] -rw-r--r-- 2 boinc boinc 608550840 May 17 19:35 ATLAS.root_0
[2024-05-17 20:24:52] -rw-r--r-- 2 boinc boinc     17537 May 17 19:35 start_atlas.sh
[2024-05-17 20:24:52] -rw-r--r-- 2 boinc boinc    480009 May 17 19:35 input.tar.gz
[2024-05-17 20:24:52] -rw------- 1 boinc boinc 226986678 May 17 20:23 HITS.pool.root.1
[2024-05-17 20:24:52] -rw------- 1 boinc boinc    686080 May 17 20:24 result.tar.gz
20:24:54 (94260): run_atlas exited; CPU time 23582.528413
20:24:54 (94260): called boinc_finish(0)

</stderr_txt>
]]>

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